NO29G00510, NO29G00510 (gene) Nannochloropsis oceanica

Overview
NameNO29G00510
Unique NameNO29G00510
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3202
Alignment locationchr29:193357..196558 +

Link to JBrowse

Properties
Property NameValue
DescriptionElongation of fatty acids protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr29genomechr29:193357..196558 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR002076ELO_fam
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0006629lipid metabolic process
Homology
BLAST of NO29G00510 vs. NCBI_GenBank
Match: XP_005855601.1 (fatty-acyl [Nannochloropsis gaditana CCMP526] >EKU20764.1 fatty-acyl [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 413.3 bits (1061), Expect = 7.300e-112
Identity = 202/300 (67.33%), Postives = 235/300 (78.33%), Query Frame = 0
Query:   39 NQARIMSFLIRTPADQIKPYFSEAAQTHYTQLFQHFPILERAYFPFEKNFRAEPFVDFAKATWPLLPLALCTAYALMIVIGTRVMKNREKFDWRGPLAYWNLTLSLFSFCGMLRTVPHLLNNITTLSFRDTVCTSAAKSYGEGASGLWVMLFIFSKIPELVDTVFIVFRKSKLQFLHWYHHITVLLFCWHSYATASSTGLYFVAMNYSVHAIMYGYYYLMAIKAWPKWIPAHLITVAQISQMVVGTSLCIASYYY-KKDGYPCAVEWENVTSGALMYGSYLYLFSEFFVRRFLLSSGKPK 338
            N +   S LI     +I PY S      +TQLFQH+P+L   Y  +EKNF A  +V+FA+ TWP LPLALC  Y LMIV+GT+VM++R K +W+  LA WNL LS+FSFCGMLRTVPHLL N+TTL F+DT+C   A++YGEGA GLWVMLFI+SK+PELVDTVFIVFRKSKLQFLHWYHHITVLLFCWHSYA  SSTGLYFVAMNYSVHA+MY YYYL AIKAWP WIP  +ITVAQISQM+VG  +C+AS+YY   D   C V+ +NV SGALMYGSYLYLF +FFVRRF L  GKP+
Sbjct:    3 NLSEAFSKLIWGEMPKIIPYRSVPDNVPFTQLFQHYPVLSPFYTEYEKNFHASSYVNFAQNTWPALPLALCGIYGLMIVVGTKVMESRPKHEWKTALACWNLLLSVFSFCGMLRTVPHLLQNVTTLPFKDTICRHPAETYGEGACGLWVMLFIYSKVPELVDTVFIVFRKSKLQFLHWYHHITVLLFCWHSYAVTSSTGLYFVAMNYSVHAVMYAYYYLTAIKAWPSWIPPSIITVAQISQMMVGVGICVASFYYLYTDPEHCEVKPQNVYSGALMYGSYLYLFCDFFVRRF-LRGGKPR 301          
BLAST of NO29G00510 vs. NCBI_GenBank
Match: EWM29442.1 (fatty-acyl [Nannochloropsis gaditana])

HSP 1 Score: 412.1 bits (1058), Expect = 1.600e-111
Identity = 201/300 (67.00%), Postives = 235/300 (78.33%), Query Frame = 0
Query:   39 NQARIMSFLIRTPADQIKPYFSEAAQTHYTQLFQHFPILERAYFPFEKNFRAEPFVDFAKATWPLLPLALCTAYALMIVIGTRVMKNREKFDWRGPLAYWNLTLSLFSFCGMLRTVPHLLNNITTLSFRDTVCTSAAKSYGEGASGLWVMLFIFSKIPELVDTVFIVFRKSKLQFLHWYHHITVLLFCWHSYATASSTGLYFVAMNYSVHAIMYGYYYLMAIKAWPKWIPAHLITVAQISQMVVGTSLCIASYYY-KKDGYPCAVEWENVTSGALMYGSYLYLFSEFFVRRFLLSSGKPK 338
            N +   S L      +I PY S      +TQLFQH+P+L   Y  +EKNF A  +V+FA+ TWP LPLALC  Y LMIV+GT+VM++R K +W+  LA WNL LS+FSFCGMLRTVPHLL+N+TTL F+DT+C   A++YGEGA GLWVMLFI+SK+PELVDTVFIVFRKSKLQFLHWYHHITVLLFCWHSYA  SSTGLYFVAMNYSVHA+MY YYYL AIKAWP WIP  +ITVAQISQM+VG  +C+AS+YY   D   C V+ +NV SGALMYGSYLYLF +FFVRRF L  GKP+
Sbjct:    3 NLSEAFSKLFWGEMPKIIPYRSVPDNVPFTQLFQHYPVLSPFYTEYEKNFHASSYVNFAQNTWPALPLALCGIYGLMIVVGTKVMESRPKHEWKTALACWNLLLSVFSFCGMLRTVPHLLHNVTTLPFKDTICRHPAETYGEGACGLWVMLFIYSKVPELVDTVFIVFRKSKLQFLHWYHHITVLLFCWHSYAVTSSTGLYFVAMNYSVHAVMYAYYYLTAIKAWPSWIPPSIITVAQISQMMVGVGICVASFYYLYTDPEHCEVKPQNVYSGALMYGSYLYLFCDFFVRRF-LRGGKPR 301          
BLAST of NO29G00510 vs. NCBI_GenBank
Match: ACV21066.1 (fatty acid elongase [Nannochloropsis oculata])

HSP 1 Score: 408.3 bits (1048), Expect = 2.400e-110
Identity = 198/298 (66.44%), Postives = 237/298 (79.53%), Query Frame = 0
Query:   41 ARIMSFLIRTPADQIKPYFSEAAQTHYTQLFQHFPILERAYFPFEKNFRAEPFVDFAKATWPLLPLALCTAYALMIVIGTRVMKNREKFDWRGPLAYWNLTLSLFSFCGMLRTVPHLLNNITTLSFRDTVCTSAAKSYGEGASGLWVMLFIFSKIPELVDTVFIVFRKSKLQFLHWYHHITVLLFCWHSYATASSTGLYFVAMNYSVHAIMYGYYYLMAIKAWPKWIPAHLITVAQISQMVVGTSLCIASYYY-KKDGYPCAVEWENVTSGALMYGSYLYLFSEFFVRRFLLSSGKPK 338
            + I  FL   P+ +I PY S   +  +TQLFQH+P+L+  Y  +EKNF A  +V FA+ TWP+LPLALC  YALMI++GT+VM +R K +W+  LA WNL LS+FSFCGM+RTVPHLL+N+ TL F+DT+C   A++YGEGA G+WVMLFIFSK+PELVDTVFIVFRKSKLQFLHWYHHITVLLFCWHSYA  SSTGLYFVAMNYSVHAIMY YYYL AI AWPKWIP  +ITVAQISQM+VG  +C +S+Y+   D   C V+ +NV +GALMYGSYLYLF +FFVRRF L  GKP+
Sbjct:    8 SNIFKFLKADPS-KIVPYKSIPDKVPFTQLFQHYPVLDPLYTQYEKNFYASTYVKFAQDTWPVLPLALCGMYALMIIVGTKVMVSRPKHEWKTALACWNLMLSIFSFCGMIRTVPHLLHNVATLPFKDTICRHPAETYGEGACGMWVMLFIFSKVPELVDTVFIVFRKSKLQFLHWYHHITVLLFCWHSYAVTSSTGLYFVAMNYSVHAIMYAYYYLTAINAWPKWIPPSIITVAQISQMIVGVGICASSFYFLYTDPEHCQVKRQNVYAGALMYGSYLYLFCDFFVRRF-LRGGKPR 303          
BLAST of NO29G00510 vs. NCBI_GenBank
Match: EWM21280.1 (fatty-acyl, partial [Nannochloropsis gaditana])

HSP 1 Score: 405.6 bits (1041), Expect = 1.500e-109
Identity = 194/207 (93.72%), Postives = 200/207 (96.62%), Query Frame = 0
Query:   44 MSFLIRTPADQIKPYFSEAAQTHYTQLFQHFPILERAYFPFEKNFRAEPFVDFAKATWPLLPLALCTAYALMIVIGTRVMKNREKFDWRGPLAYWNLTLSLFSFCGMLRTVPHLLNNITTLSFRDTVCTSAAKSYGEGASGLWVMLFIFSKIPELVDTVFIVFRKSKLQFLHWYHHITVLLFCWHSYATASSTGLYFVAMNYSVHAI 251
            MSFLIRTPADQIKPYFSEAAQTHYTQLFQHFPILER YFPFEKNF AEPFV+FAKATWP LPLALCT YALMIV+G+RVMKNRE+FDWRGPLAYWNL LSLFSFCGMLRTVPHLLNNITTLSFR+TVCTSAAK+YGEGA GLWVMLFIFSKIPELVDTVFIVFRKSKLQFLHWYHHITVLLFCWHSYAT SSTGLYFVAMNYSVHAI
Sbjct:    1 MSFLIRTPADQIKPYFSEAAQTHYTQLFQHFPILERTYFPFEKNFHAEPFVNFAKATWPALPLALCTLYALMIVVGSRVMKNRERFDWRGPLAYWNLCLSLFSFCGMLRTVPHLLNNITTLSFRETVCTSAAKAYGEGACGLWVMLFIFSKIPELVDTVFIVFRKSKLQFLHWYHHITVLLFCWHSYATESSTGLYFVAMNYSVHAI 207          
BLAST of NO29G00510 vs. NCBI_GenBank
Match: ADP09412.1 (elongase [Nannochloropsis oculata])

HSP 1 Score: 356.7 bits (914), Expect = 8.100e-95
Identity = 172/173 (99.42%), Postives = 172/173 (99.42%), Query Frame = 0
Query:   44 MSFLIRTPADQIKPYFSEAAQTHYTQLFQHFPILERAYFPFEKNFRAEPFVDFAKATWPLLPLALCTAYALMIVIGTRVMKNREKFDWRGPLAYWNLTLSLFSFCGMLRTVPHLLNNITTLSFRDTVCTSAAKSYGEGASGLWVMLFIFSKIPELVDTVFIVFRKSKLQFLHW 217
            MSFLIRTPADQIKPYFSEAAQTHYTQLFQHFPILERAYFPFEKNFRAEPFVDFAKATWPLLPLALCTAYALMIVIGTRVMKNREKFDWRGPLAYWNLTLSLFSFCGMLRTVPHLLNNITTLSFRDTVCTSAAKSYGEG SGLWVMLFIFSKIPELVDTVFIVFRKSKLQFLHW
Sbjct:    1 MSFLIRTPADQIKPYFSEAAQTHYTQLFQHFPILERAYFPFEKNFRAEPFVDFAKATWPLLPLALCTAYALMIVIGTRVMKNREKFDWRGPLAYWNLTLSLFSFCGMLRTVPHLLNNITTLSFRDTVCTSAAKSYGEGVSGLWVMLFIFSKIPELVDTVFIVFRKSKLQFLHW 173          
BLAST of NO29G00510 vs. NCBI_GenBank
Match: XP_005854181.1 (fatty-acyl [Nannochloropsis gaditana CCMP526] >EKU22182.1 fatty-acyl [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 304.3 bits (778), Expect = 4.800e-79
Identity = 161/300 (53.67%), Postives = 193/300 (64.33%), Query Frame = 0
Query:   39 NQARIMSFLIRTPADQIKPYFSEAAQTHYTQLFQHFPILERAYFPFEKNFRAEPFVDFAKATWPLLPLALCTAYALMIVIGTRVMKNREKFDWRGPLAYWNLTLSLFSFCGMLRTVPHLLNNITTLSFRDTVCTSAAKSYGEGASGLWVMLFIFSKIPELVDTVFIVFRKSKLQFLHWYHHITVLLFCWHSYATASSTGLYFVAMNYSVHAIMYGYYYLMAIKAWPKWIPAHLITVAQISQMVVGTSLCIASYYY-KKDGYPCAVEWENVTSGALMYGSYLYLFSEFFVRRFLLSSGKPK 338
            N +   S LI     +I PY S      +TQLFQH+P+L   Y  +EKNF A  +V+FA+ TWP LPLALC  Y LMIV+GT+VM++R K +W+  LA WNL LS+FSFCGMLRTVPHLL N+TTL F+DT+C   A++YGEGA GLWVMLFI+SK+PELVDTVFIVFRKSKLQ                                              AIKAWP WIP  +ITVAQISQM+VG  +C+AS+YY   D   C V+ +NV SGALMYGSYLYLF +FFVRRF L  GKP+
Sbjct:    3 NLSEAFSKLIWGEMPKIIPYRSVPDNVPFTQLFQHYPVLSPFYTEYEKNFHASSYVNFAQNTWPALPLALCGIYGLMIVVGTKVMESRPKHEWKTALACWNLLLSVFSFCGMLRTVPHLLQNVTTLPFKDTICRHPAETYGEGACGLWVMLFIYSKVPELVDTVFIVFRKSKLQ---------------------------------------------TAIKAWPSWIPPSIITVAQISQMMVGVGICVASFYYLYTDPEHCEVKPQNVYSGALMYGSYLYLFCDFFVRRF-LRGGKPR 256          
BLAST of NO29G00510 vs. NCBI_GenBank
Match: GAX19603.1 (elongation of very long chain fatty acids protein 6 [Fistulifera solaris])

HSP 1 Score: 287.3 bits (734), Expect = 6.100e-74
Identity = 144/269 (53.53%), Postives = 178/269 (66.17%), Query Frame = 0
Query:   74 FPILERAYFPFEKNFRAEPFVDFAKATWPLLPLALCTAYALMIVIGTRVMKNREKFDWRGPLAYWNLTLSLFSFCGMLRTVPHLLNNITTLSFRDTVCTSAAKSYGEGASGLWVMLFIFSKIPELVDTVFIVFRKSKLQFLHWYHHITVLLFCWHSYATASSTGLYFVAMNYSVHAIMYGYYYLMAIKAWPKWIPAHLITVAQISQMVVGTSLCIASYYYKKDGYPCAVEWENVTSGALMYGSYLYLFSEFFVRR-FLLSSGKPKAKTV 342
            +P +E  Y  FEK +   P +++ K   P +P+A C  YA+ I  G      R++++WR  LA WNL LS+FSF GMLRT PHL +N+T LSFRD +C     +YG G++GLWV LFI SK PEL+DT FIV  K  L FLHWYHHITVLL+CWHSY T S TG+ F AMNY+VHA MYGYY+LMA++  PKW    +IT  QISQMVVG +  I SYYY      CA++  N  +  LMYGSYL+LF +FF  R F L S   K KTV
Sbjct:   23 YPQVEHLYTSFEKFYDPIPLLNWMKGQ-PGIPVAACIIYAVSIYYGQAYFAKRDRWNWRNTLAVWNLFLSVFSFVGMLRTAPHLFHNLTHLSFRDNMCLDPRTTYGSGSTGLWVQLFILSKFPELIDTFFIVIHKKPLIFLHWYHHITVLLYCWHSYVTTSPTGIIFTAMNYTVHATMYGYYFLMALRMKPKWFNPMVITAMQISQMVVGVATTIVSYYYFLTDAECALDRGNNIAAFLMYGSYLFLFCQFFFSRYFSLKSSPVKKKTV 290          
BLAST of NO29G00510 vs. NCBI_GenBank
Match: OEU18932.1 (GNS1/SUR4 membrane protein [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 281.2 bits (718), Expect = 4.300e-72
Identity = 138/278 (49.64%), Postives = 185/278 (66.55%), Query Frame = 0
Query:   67 YTQLFQHFPILERAYFPFEKNFRAEPFVDFAKATWPLLPLALCTAYALMIVIGTRVMKNREKFDWRGPLAYWNLTLSLFSFCGMLRTVPHLLNNITTLSFRDTVCTSAAK---SYGEGASGLWVMLFIFSKIPELVDTVFIVFRKSKLQFLHWYHHITVLLFCWHSYATASSTGLYFVAMNYSVHAIMYGYYYLMAIKAWPKWIPAHLITVAQISQMVVGTSLCIASYYYKKDGYPCAVEWENVTSGALMYGSYLYLFSEFFVRRFLLSSGKPKAKTV 342
            Y +    +P LE  YF FEKN+   P +++ +    ++P+     Y ++I +G   M+NRE F+ R  +A+WNL LS+FS+ GM RT+P LL+N+  LS RD +C  + +   SYG G+SGLW +LF+ SK PEL+DT FIV  K  L FLHWYHHITVLL+CWHSY T S  G++F  MNYSVHA MYGYY+LMA+K  PKW    +IT+ QISQMVVG S+ +A +YY K    C ++ EN T+  +MYGSYL+LF +FF  R+    G  K K+V
Sbjct:   19 YREFSCEYPQLEPFYFEFEKNYDPIPLLEWMR-YHSMIPVYAVILYGVLITVGQYAMRNREPFNLRRLMAFWNLALSVFSWIGMFRTLPQLLHNLYHLSMRDNLCMDSRETIASYGSGSSGLWFLLFVLSKFPELIDTFFIVIHKKPLIFLHWYHHITVLLYCWHSYVTTSPLGIFFSVMNYSVHASMYGYYFLMAMKMRPKWFNPIIITIFQISQMVVGVSVTLAGFYYYKTDPTCGIQNENNTAAFVMYGSYLFLFLQFFFGRYFKKKGGKKQKSV 295          
BLAST of NO29G00510 vs. NCBI_GenBank
Match: GAX09713.1 (elongation of very long chain fatty acids protein 6 [Fistulifera solaris])

HSP 1 Score: 280.8 bits (717), Expect = 5.700e-72
Identity = 144/272 (52.94%), Postives = 178/272 (65.44%), Query Frame = 0
Query:   71 FQHFPILERAYFPFEKNFRAEPFVDFAKATWPLLPLALCTAYALMIVIGTRVMKNREKFDWRGPLAYWNLTLSLFSFCGMLRTVPHLLNNITTLSFRDTVCTSAAKSYGEGASGLWVMLFIFSKIPELVDTVFIVFRKSKLQFLHWYHHITVLLFCWHSYATASSTGLYFVAMNYSVHAIMYGYYYLMAIKAWPKWIPAHLITVAQISQMVVGTSLCIASYYYKKDGYPCAVEWENVTSGALMYGSYLYLFSEFFVRR-FLLSSGKPKAKTV 342
            F  + +L  A   FEK +   P +++ K   P +P+A C  YA+ I  G      R++++WR  LA WNL LS+FSF GMLRT PHL +N+T LSFRD +C     +YG G++GLWV LFI SK PEL+DT FIV  K  L FLHWYHHITVLL+CWHSY T S TG+ F AMNY+VHA MYGYY+LMA++  PKW    +IT  QISQMVVG +  I SYYY      CA++  N  +  LMYGSYL+LF +FF  R F L S   K KTV
Sbjct:   12 FSSYVLLCFALDSFEKFYDPIPLLNWMKGQ-PGIPVAACIIYAVSIYYGQAYFAKRDRWNWRYTLAVWNLFLSVFSFVGMLRTAPHLFHNLTHLSFRDNMCLDPRTTYGSGSTGLWVQLFILSKFPELIDTFFIVIHKKPLIFLHWYHHITVLLYCWHSYVTTSPTGIIFTAMNYTVHATMYGYYFLMALRMKPKWFNPMVITAMQISQMVVGVATTIVSYYYFLTDAECALDRGNNIAAFLMYGSYLFLFCQFFFSRYFSLKSSPVKKKTV 282          
BLAST of NO29G00510 vs. NCBI_GenBank
Match: XP_002293395.1 (long chain fatty acid elongase [Thalassiosira pseudonana CCMP1335] >EED89131.1 long chain fatty acid elongase [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 279.6 bits (714), Expect = 1.300e-71
Identity = 141/282 (50.00%), Postives = 179/282 (63.48%), Query Frame = 0
Query:   66 HYTQLFQHFPILERAYFPFEKNFRAEPFVD-FAKATW----PLLPLALCTAYALMIVIGTRVMKNREKFDWRGPLAYWNLTLSLFSFCGMLRTVPHLLNNITTLSFRDTVCTSAAKSYGEGASGLWVMLFIFSKIPELVDTVFIVFRKSKLQFLHWYHHITVLLFCWHSYATASSTGLYFVAMNYSVHAIMYGYYYLMAIKAWPKWIPAHLITVAQISQMVVGTSLCIASYYYKKD---GYPCAVEWENVTSGALMYGSYLYLFSEFFVRRFLLSSGKPKAK 340
            HY +     P+L   Y PFE+      F D  A  TW    P++P+  C AY ++IV+G   MK+R  + WR  LA WNL+LSLFS+ G +RT P L  N+TT S RD +C   A  YG G++GLWV LFI SK PEL+DT FIV  K  L FLHWYHHITVLL+CWHSY T S +GL+FV MNYSVHA+MYGYY+LMA+K  PKW     +T  Q+SQM +G  + I ++YY  +   G  C +  EN  +  +MYGSY YLF++FFV R+     K  AK
Sbjct:   21 HYAEFSCLHPLLGATYLPFER------FYDPVATLTWMQDRPMIPIIACVAYVVLIVLGRAYMKDRPAWSWRRILAVWNLSLSLFSWIGAIRTAPQLYYNLTTYSLRDNLCDDPAALYGSGSTGLWVQLFILSKFPELLDTFFIVIHKKPLIFLHWYHHITVLLYCWHSYVTTSPSGLFFVVMNYSVHAVMYGYYFLMAVKFRPKWFNPMFVTFMQLSQMFIGVGVTIVAFYYYSNPILGKTCHIRKENNVAAFVMYGSYFYLFAQFFVARYYKVKVKGDAK 296          
The following BLAST results are available for this feature:
BLAST of NO29G00510 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_005855601.17.300e-11267.33fatty-acyl [Nannochloropsis gaditana CCMP526] >EKU... [more]
EWM29442.11.600e-11167.00fatty-acyl [Nannochloropsis gaditana][more]
ACV21066.12.400e-11066.44fatty acid elongase [Nannochloropsis oculata][more]
EWM21280.11.500e-10993.72fatty-acyl, partial [Nannochloropsis gaditana][more]
ADP09412.18.100e-9599.42elongase [Nannochloropsis oculata][more]
XP_005854181.14.800e-7953.67fatty-acyl [Nannochloropsis gaditana CCMP526] >EKU... [more]
GAX19603.16.100e-7453.53elongation of very long chain fatty acids protein ... [more]
OEU18932.14.300e-7249.64GNS1/SUR4 membrane protein [Fragilariopsis cylindr... [more]
GAX09713.15.700e-7252.94elongation of very long chain fatty acids protein ... [more]
XP_002293395.11.300e-7150.00long chain fatty acid elongase [Thalassiosira pseu... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL063nonsL063Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL061nonsL061Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR038ncniR038Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR081ngnoR081Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK005162NSK005162Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO29G00510.1NO29G00510.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|601182gene_8223Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO29G00510.1NO29G00510.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO29G00510 ID=NO29G00510|Name=NO29G00510|organism=Nannochloropsis oceanica|type=gene|length=3202bp
CACACACACACACACACACACACACACACACACACACACGCATACCACAC
ACGATACAGGGGCCGCACACTGCATGGGCCTAGCAGATCGGTTTTTTGGC
ACGCTTGTCCTTTCTTTGTGTCGTCGAGGCGCGAGAGAAAACGACGTCAA
AAAATCAAACCATGCTGTTTTTGATGTCTATGACAAGTCGACGCCTCGTG
ACCTACCAGGACAGGGGCATGCCTCCCTTTGACATGTGCAGGGTGACACA
CGCTCACGTGATTGGTTGTCGCATGGAGCGCATTCCCTTAATTCTTTTTG
GCGAGCCAAAAAAACAGAGGCCTGAGAGGGCTGGCATTCGTCGCGTCGTG
CGAGAGTTGTTTACACCCGTGTTCAAAGCGGGAGTGGTGTCAACGTTCAT
GGAGACACCCCTTGCCATTTCGACTTTTGCCTTTGCAATGTTTGCAGCAT
TTGTGCAATTTTGTGTGCCCTTCCTTGTGGGAGTCCGCCCACAGCATGGA
GGAACACAAAAGAAAAATTGAATTCGTGGCGAGGCACGGAAAGGACGACA
GCTCGACCGCCCCCTCCTCACACCCTACTAAGGCAACACGACTGCAGGGA
AGATCCTGGCTAATCATGGCACCTCCAATGCGACATAGGCTGGGCGATGG
CGACAGAAGGGTGCGCAGAACATAGAGACATACGAGAGGAGTGCGGCGGG
CCCCACCTAGGGGGAAGGAACGGCGAACGACGAAAAAGAGGGCCTTTTGC
CATTGTGCCACAGGCGCCTGTGCCTTGCGCTTTCCCCCTTCCAAGCCCTT
TTTCAGGCTTGAGGGAGTGTCTAGGAGTACCATTGAGTGATTTTGCAGGA
GATTGAGAAGCCTTCTAGTCCCCCATTCCTACGGTACTACACCTCGATGG
AATGCAGGAGGACTCGTCGCATCGTATACTGGAAAGGATGTCAAGGCGGA
GTGTTTTCGCCTGGAAAGACCGAAGGAAACTCACATTCACATGACAAAGA
TGGTAAAAGCAATTTGTTTATGTGTGTGTCCACCATTTTAAAAGTCGTGG
CGCGCCCCTTTGTCAAGGGCACGCCCGTCGTCGCGACGAATAACAACAAG
TGTATCAGCAGCACCTGCACCTGCACCTACACCTGCACCAGCGGGATTGA
TTGCCTCGGAGTACCCTCGTGCTGTGCAATATGAAGTTCTATGTCATACG
AAACCTCCTTCCCCACTGACCATGTACCCCACGCCTTCCCTTCCCTTTAC
GCCACACGCACAGGCTCTCTTTCATCGTCAGCAGCAGCAGTAGTAGCAAC
AGTAAATCAAGCTAGGATCATGTCATTCCTCATTCGTACTCCCGCTGATC
AAATCAAGCCCTACTTCTCAGAGgtgcgtgaagggcagagaggaagggaa
agagtgagggagggaaggaggagggagggaaagaggaagggagagagagt
ggggaggtcgactttaaagcaggaaaaacgtgatcattccctctctccct
ccctcctctccttttctacagGCGGCACAAACTCACTACACTCAGCTCTT
TCAGCATTTTCCCATCTTGGAGCGGGCCTACTTCCCCTTTGAGAAGAACT
TCCGTGCCGAGCCCTTCGTCGACTTTGCCAAGGCCACGTGGCCGTTACTG
CCGTTGGCGCTTTGTACGGCCTACGCGCTGATGATCGTCATTGGCACCCG
CGTCATGAAGAACAGgtccgtcggtcaatctgtctgtccctccttcccta
ccctccctccctccttcccttcctgcctctacccatcagccggctgtggt
tgcacctgacgacgagctcgccacaccgtgcaatggttcgccctgtcttc
actccctcgttcccccctcgctcccccctccgcactcccttgcagAGAGA
AGTTCGATTGGCGTGGGCCTCTGGCCTACTGGAATCTGACGCTCTCCCTC
TTCTCCTTCTGCGGCATGCTGCGGACGGTCCCGCACCTGCTCAACAACAT
CACAACCCTGTCCTTCCGGGACACGGTGTGCACGTCTGCGGCAAAGAGCT
ACGGCGAAGGCGCGTCGGGCCTGTGGGTGATGCTCTTCATCTTCAGCAAA
ATTCCTGAGCTGGTCGACACGGTTTTCATTGTCTTCCGCAAAAGCAAGCT
TCAAgtacgttcgtccctccctccctcctttcccacctccctccccacct
cccccagatactctcctcgtcgcgtcaaaacgacaggcacacctcccaca
aactgccccacactcatcctcgaccctccctccctccctccctccctcct
tccctcccagTTCCTGCATTGGTACCACCACATCACCGTCCTCCTCTTCT
GCTGGCATTCGTACGCGACTGCCTCCTCCACTGGTCTCTACTTCGTGGCC
ATGAACTACTCCGTGCATGCCATCATGTACGGCTACTACTACCTGgtacg
tgccctccctccctccctccctccctccctccttccctccctccctccct
ctagtcctcgccgtcctctttggccgccgagagccagtcaaagcgtttcc
cgtgcgtctcatcctctcggtacttccaaacggaacctcccttcatccat
ccctttctccctccctccctccctccctccctccctccttcagATGGCCA
TTAAAGCTTGGCCTAAGTGGATTCCTGCCCACCTCATTACTGTCGCGCAG
ATCTCCCAGATGGTGGTGGGCACATCCCTCTGCATTGCCTCCTATTACTA
CAAGAAGgtacgcccgtcctccctgctttcttcctcctttatggaacatt
aaaatcacagggtgggggacattgcacacagactcaaccttccctccctc
cctcccttcctccctcctgtcgttcaaaccacccttaagGACGGGTATCC
ATGTGCGGTGGAGTGGGAAAACGTCACCTCCGGTGCGCTGATGTATGGCT
CGTACCTCTATCTCTTCAGCGAATTTTTCGTCCGCAGGTTCTTACTGTCG
TCGGGCAAGCCCAAGGCCAAGACGGTCTAAAGAAAAGGAAGGAAGGGAGG
GAGGGAAGGCTGGAGGGCGGTAGGTGGTCGCCCTGTCCTCGTCCATGGTG
TTTGTCGTGCATCGGCACATCTTTCGCCTTCGGACAAGGACCGCAAGCGA
TGACGAGTCAAGGAGGGGGAAAAGGGAGGGAGGGAGGGAGGGAGGGAGGG
AG
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protein sequence of NO29G00510.1

>NO29G00510.1-protein ID=NO29G00510.1-protein|Name=NO29G00510.1|organism=Nannochloropsis oceanica|type=polypeptide|length=342bp
MSYETSFPTDHVPHAFPSLYATRTGSLSSSAAAVVATVNQARIMSFLIRT
PADQIKPYFSEAAQTHYTQLFQHFPILERAYFPFEKNFRAEPFVDFAKAT
WPLLPLALCTAYALMIVIGTRVMKNREKFDWRGPLAYWNLTLSLFSFCGM
LRTVPHLLNNITTLSFRDTVCTSAAKSYGEGASGLWVMLFIFSKIPELVD
TVFIVFRKSKLQFLHWYHHITVLLFCWHSYATASSTGLYFVAMNYSVHAI
MYGYYYLMAIKAWPKWIPAHLITVAQISQMVVGTSLCIASYYYKKDGYPC
AVEWENVTSGALMYGSYLYLFSEFFVRRFLLSSGKPKAKTV*
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Synonyms
Publications