NO29G00460, NO29G00460 (gene) Nannochloropsis oceanica

Overview
NameNO29G00460
Unique NameNO29G00460
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2928
Alignment locationchr29:177796..180723 +

Link to JBrowse

Properties
Property NameValue
DescriptionGlycoprotein 3-alpha-l-fucosyltransferase a
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr29genomechr29:177796..180723 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006486protein glycosylation
GO:0008152metabolic process
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO:0016020membrane
GO:0005794Golgi apparatus
Vocabulary: Molecular Function
TermDefinition
GO:0008417fucosyltransferase activity
GO:0016740transferase activity
Vocabulary: INTERPRO
TermDefinition
IPR001503Glyco_trans_10
Homology
BLAST of NO29G00460 vs. NCBI_GenBank
Match: EWM21269.1 (glycoprotein 3-alpha-l-fucosyltransferase a [Nannochloropsis gaditana])

HSP 1 Score: 461.8 bits (1187), Expect = 4.800e-126
Identity = 233/370 (62.97%), Postives = 277/370 (74.86%), Query Frame = 0
Query:  566 VPCVY------FGWSPPDDVFFNPMKLPPVPGAEKENVAAAFI----SNCGAKSFRLLALQALEAHNVTVHSHGRCANNQPDIHKDTILPTIKFSLAFENSEELDYVTEKYLQALNFGAVPVVIGAPNIQDFAPSDNSIIHIENEAALPQVAERMLYLMQNDTAYDEMLAWKIDGPSDQFLALIDIGTVGPECRLCLHLADRTRRGEKYRALSAAK--NMHRPCACQVPATEGADGRETEEGTNLAESVTIHHLYIRERSTFEFRSLFVREPLTVARLHTAILDLYGAEHQPVWARKRPSYRRKLLDGSWDLTHVQVKIHKVYPAGITWREALYGSLPDQFTVAGNDTMDKALRKWVRQNPCGEVEVTFV 924
            +PC++      F  SPP     +    PP+P       A++F+    SNC A SFRL A+   + HNVTVHS+GRC NNQPDIHKD  LP +KFSLAFENSEE+DYVTEKY QALNFGAVPVVIGAPNI D+APS+NSIIHIEN AALP+VA +M  LM +D AYD MLAWK  GPSDQFLAL+D+GTV PECRLCL+LADR RRGE ++  + AK     RPCAC+ P  EG +G     G+N      IHHLY+RER TFE+RSLF+ EP TVA LH  +L LYG+EH+PVW RKRPSYR+K  DGSWD+ +V +KIHKVYPAGIT +EALYG +PD F+V GN TMD+ALR+WV+QNPCGE+EVTFV
Sbjct:   29 MPCIFSGVLAAFTRSPP-----HCRPSPPLP-------ASSFLFPHPSNCHANSFRLEAISFFQKHNVTVHSYGRCLNNQPDIHKDDRLPHVKFSLAFENSEEVDYVTEKYFQALNFGAVPVVIGAPNILDYAPSENSIIHIENLAALPRVAAQMQALMADDHAYDAMLAWKARGPSDQFLALVDVGTVAPECRLCLYLADRVRRGEAFKDRAKAKEDGYRRPCACR-PQEEGGEG-----GSN----GVIHHLYVRERFTFEYRSLFLTEPFTVATLHATLLALYGSEHRPVWTRKRPSYRKKSPDGSWDMAYVPIKIHKVYPAGITTKEALYGQIPDAFSVVGNRTMDQALRRWVKQNPCGEIEVTFV 376          
BLAST of NO29G00460 vs. NCBI_GenBank
Match: XP_005645422.1 (hypothetical protein COCSUDRAFT_37671 [Coccomyxa subellipsoidea C-169] >EIE20878.1 hypothetical protein COCSUDRAFT_37671 [Coccomyxa subellipsoidea C-169])

HSP 1 Score: 314.3 bits (804), Expect = 1.200e-81
Identity = 206/485 (42.47%), Postives = 271/485 (55.88%), Query Frame = 0
Query:  457 VAPAGQTCEAFLEAADQLQYSERRRDFEKSPIRVHKN-ADNVDIGRCDLKCIYSSG------DDYGAYDASYDQTWPNVP----LVKWTMESYTNYPDSEVETAHASGFEIVMTPRLDSEVPCVYFGWSPPDDVFFNPMKLPPVPGAEKENVAAAFISNCGAKSFRLLALQALEAHNVTVHSHGRCANN-QPDIHKDTILPTIKFSLAFENSEELDYVTEKYLQALNFGAVPVVIGAPNIQDFAPSDNSIIHIENEAALPQVAERMLYLMQNDTAYDEMLAWKIDGPSDQFLALIDIGTVGPECRLCLHLADRTRRGEKYRALSAAKNMHR--PCACQVPATEGADGRETEEGTNLAESVTIHHLYIRERSTFEFRSLFV-REPLTVARLHTAILDLYGAEHQ-PVWARKRPSYRRKLLDGSWDLTHVQVKIHKVYPAGITWREALYG--SLPDQFTVAGNDTMDKALRKWVRQNPCGEVEVTFV 924
            +APAGQ+CE++L  AD   Y   +RDF++ PI V +    + ++  C + C    G      +    YDA +       P     V   MES +NYP   VE A   G++IVMT RLDS+VP  Y  W+      +  MK P VP   KE    AFISNCGAKSFRL AL+AL A N TVHS+GRC +N      K  +L   KF+LAFENS+ELDY+TEKY+QAL  G+VP+VIGA NI D+  + NS++ +E+   +P VA RM  L++N TAYDEMLAWK  GP D+FLAL+D+  V   C LC+ LA R R  E+     AA+ + R  PC+C+  A  GA                +HHL +RER  FE R +F+    LTVA LH AI   +G   Q P+W   RP ++    +     T ++++I++VY  G T R ALYG  SL     VAG           V  NPC ++EV FV
Sbjct:    1 MAPAGQSCESWLTQADARVY---QRDFQRQPITVMEGYGQDTELAGCAVPCKMVGGGPGQPAEGTPLYDAHFGPAAGAAPGTGLSVVRNMESMSNYPGLAVERARYDGYDIVMTTRLDSDVPASYLSWAE-----YLVMK-PLVP---KEADVVAFISNCGAKSFRLQALEALSA-NFTVHSYGRCLHNVDTRDPKADVLRRYKFTLAFENSQELDYITEKYIQALEAGSVPIVIGATNIADYEVAPNSMLVLESMEDIPAVAARMQQLLRNKTAYDEMLAWKEIGPQDKFLALLDLSVVHSSCSLCIQLATRIRTAEE-----AAQQLQRQPPCSCR-RAPGGA---------------VVHHLLVRERGRFESRDVFLDGGNLTVAGLHAAINQAFGRAGQVPIWQSHRPDFKGGAREIGKFNTLIKLRIYRVYQVGQTQRAALYGEASLDTDLKVAG----------IVSGNPCAKLEVVFV 441          
BLAST of NO29G00460 vs. NCBI_GenBank
Match: XP_006487108.1 (PREDICTED: glycoprotein 3-alpha-L-fucosyltransferase A [Citrus sinensis])

HSP 1 Score: 307.8 bits (787), Expect = 1.200e-79
Identity = 187/466 (40.13%), Postives = 263/466 (56.44%), Query Frame = 0
Query:  462 QTCEAFLEAADQLQYSERRRDFEKSPIRVHKNADNVDIGRCDLKCIYSSGDDYGAYDASYDQT-WPNVPLVKWTMESYTNYPDSEVETAHASGFEIVMTPRLDSEVPCVYFGWSPPDDVFFNPMKLPPVPGAEKENVAAAFISNCGAKSFRLLALQALEAHNVTVHSHGRCANNQPD-IHKDTILPTIKFSLAFENSEELDYVTEKYLQALNFGAVPVVIGAPNIQDFAPSDNSIIHIENEAALPQVAERMLYLMQNDTAYDEMLAWKIDGPSDQFLALIDIGTVGPECRLCLHLADRTRRGEKYRALSAAKNMHRPCACQVPATEGADGRETEEGTNLAESVTIHHLYIRERSTFEFRSLFVRE-PLTVARLHTAILDLY-GAEHQPVWARKRPSYRRKLLDGSWDLTHVQVKIHKVYPAGITWREALYGSLPDQFTVAGNDTMDKALRKWVRQNPCGEVEVTFV 924
            ++CE +LE  D + YS   RDFEK PI V        +  CD++C +   DD    DAS+  +  P    V  +MES   Y ++ +  A   G+ IVMT  L S+VP  YF W+  D        + PV    +  +AAAFISNCGA++FRL AL+ALE  NV + S+G C  N+   + K   L   KFSLAFENS E DYVTEK+ QAL  G+VPVV+GAPNIQDFAPS  SI+HI     +  VA+ M YL +N  AY++ L+WK +GPSD F AL+D+  V   CRLC++LA + +  E+    +      RPC C    T G++              T+HHLY+RER  F+  S+F+R   LT+  L +A+L  +   +H P+W ++RP    K + G  +L     KI++++P G+T R+ALY     +F   G+D     L++ +  +PC + EV FV
Sbjct:  108 ESCEEWLERVDAVNYS---RDFEKDPILVTGAEQEWRV--CDVRCKFGYDDDRKP-DASFGMSQQPGTDTVLRSMESSQYYAENNIAQARRRGYTIVMTTSLSSDVPVGYFSWAEYD-------IMAPVQPKTESALAAAFISNCGARNFRLQALEALEKENVKIDSYGGCHRNRDGRVEKVETLKRYKFSLAFENSNEEDYVTEKFFQALVAGSVPVVVGAPNIQDFAPSPKSILHIREREDVKSVAKTMKYLAENPEAYNQSLSWKYEGPSDSFKALVDMAAVHSSCRLCIYLATKIQEREE----TNPAFRKRPCKC----TRGSE--------------TVHHLYVRERGRFKMVSIFLRSGSLTLKALESAVLAKFKSLKHVPIWKQERP----KSIRGEDEL-----KIYRIHPVGLTQRQALY-----EFKFNGDDD----LKRHIESSPCAKFEVIFV 520          
BLAST of NO29G00460 vs. NCBI_GenBank
Match: XP_016715583.1 (PREDICTED: glycoprotein 3-alpha-L-fucosyltransferase A-like [Gossypium hirsutum] >XP_016721949.1 PREDICTED: glycoprotein 3-alpha-L-fucosyltransferase A-like [Gossypium hirsutum])

HSP 1 Score: 307.8 bits (787), Expect = 1.200e-79
Identity = 191/466 (40.99%), Postives = 258/466 (55.36%), Query Frame = 0
Query:  462 QTCEAFLEAADQLQYSERRRDFEKSPIRVHKNADNVDIGRCDLKCIYSSGDDYGAYDASYD-QTWPNVPLVKWTMESYTNYPDSEVETAHASGFEIVMTPRLDSEVPCVYFGWSPPDDVFFNPMKLPPVPGAEKENVAAAFISNCGAKSFRLLALQALEAHNVTVHSHGRCANNQPD-IHKDTILPTIKFSLAFENSEELDYVTEKYLQALNFGAVPVVIGAPNIQDFAPSDNSIIHIENEAALPQVAERMLYLMQNDTAYDEMLAWKIDGPSDQFLALIDIGTVGPECRLCLHLADRTRRGEKYRALSAAKNMHRPCACQVPATEGADGRETEEGTNLAESVTIHHLYIRERSTFEFRSLFVRE-PLTVARLHTAILDLYG-AEHQPVWARKRPSYRRKLLDGSWDLTHVQVKIHKVYPAGITWREALYGSLPDQFTVAGNDTMDKALRKWVRQNPCGEVEVTFV 924
            +TCE +LE  D L YS   RDF K PI +  + D  D   C + C + S     A DA++        P V  +MES + Y ++ +  A   GFEIVMT  L S+VP  YF W+  D      +  P +P +EK  +AAAFISNC A +FRL AL  LE  N+ + S+GRC  N+ + + K  IL   KFSLAFENS E DYVTEK+ Q+L  G+VPVVIGAPNI+DFAPS +S +HI++   +  +AE+M YL  N  AY+ +L WK +GP+D F AL+D+  V   CRLC+H+A  T   EK    S AK   RPC C                     S T++HLY+RER  FE  S+F+R   +T+  L  A+L  +   +H P+W  +RP     L  G       ++K+H++YP G+T R+ALY      F   G    D  L+  +  NPC + EV FV
Sbjct:   98 ETCEEWLEREDTLVYS---RDFNKDPIWILISGDKEDFKSCAVNCSFRSNWSRKA-DATFKLPKKSKAPRVHRSMESASYYEENNITQARRDGFEIVMTTSLSSDVPVGYFSWAEYD------IMAPVIPKSEKA-LAAAFISNCMASNFRLEALMELEKENIKIDSYGRCHKNRDERVDKVEILKRYKFSLAFENSNEEDYVTEKFFQSLVAGSVPVVIGAPNIEDFAPSSDSYLHIKDLKDVRSIAEQMKYLAGNPDAYNRLLRWKQEGPTDTFKALVDMAAVHSSCRLCIHIA--TTIWEKEEKDSDAKK--RPCKCN------------------KGSETVYHLYVRERGRFEMDSIFLRSGNMTLKALEVAVLTHFKFRKHVPIWKPERP---ESLRGGD------ELKVHRIYPLGLTQRQALY-----TFKFKG----DADLKNHIENNPCAKFEVIFV 512          
BLAST of NO29G00460 vs. NCBI_GenBank
Match: PPD69985.1 (hypothetical protein GOBAR_DD33134 [Gossypium barbadense])

HSP 1 Score: 307.8 bits (787), Expect = 1.200e-79
Identity = 191/466 (40.99%), Postives = 258/466 (55.36%), Query Frame = 0
Query:  462 QTCEAFLEAADQLQYSERRRDFEKSPIRVHKNADNVDIGRCDLKCIYSSGDDYGAYDASYD-QTWPNVPLVKWTMESYTNYPDSEVETAHASGFEIVMTPRLDSEVPCVYFGWSPPDDVFFNPMKLPPVPGAEKENVAAAFISNCGAKSFRLLALQALEAHNVTVHSHGRCANNQPD-IHKDTILPTIKFSLAFENSEELDYVTEKYLQALNFGAVPVVIGAPNIQDFAPSDNSIIHIENEAALPQVAERMLYLMQNDTAYDEMLAWKIDGPSDQFLALIDIGTVGPECRLCLHLADRTRRGEKYRALSAAKNMHRPCACQVPATEGADGRETEEGTNLAESVTIHHLYIRERSTFEFRSLFVRE-PLTVARLHTAILDLYG-AEHQPVWARKRPSYRRKLLDGSWDLTHVQVKIHKVYPAGITWREALYGSLPDQFTVAGNDTMDKALRKWVRQNPCGEVEVTFV 924
            +TCE +LE  D L YS   RDF K PI +  + D  D   C + C + S     A DA++        P V  +MES + Y ++ +  A   GFEIVMT  L S+VP  YF W+  D      +  P +P +EK  +AAAFISNC A +FRL AL  LE  N+ + S+GRC  N+ + + K  IL   KFSLAFENS E DYVTEK+ Q+L  G+VPVVIGAPNI+DFAPS +S +HI++   +  +AE+M YL  N  AY+ +L WK +GP+D F AL+D+  V   CRLC+H+A  T   EK    S AK   RPC C                     S T++HLY+RER  FE  S+F+R   +T+  L  A+L  +   +H P+W  +RP     L  G       ++K+H++YP G+T R+ALY      F   G    D  L+  +  NPC + EV FV
Sbjct:   98 ETCEEWLEREDTLVYS---RDFNKDPIWILISGDKEDFKTCAVNCSFRSNWSRKA-DATFKLPKKSKAPRVHRSMESASYYEENNITQARRDGFEIVMTTSLSSDVPVGYFSWAEYD------IMAPVIPKSEKA-LAAAFISNCMASNFRLEALMELEKENIKIDSYGRCHKNRDERVDKVEILKRYKFSLAFENSNEEDYVTEKFFQSLVAGSVPVVIGAPNIEDFAPSSDSYLHIKDLKDVRSIAEQMKYLAGNPDAYNRLLRWKQEGPTDTFKALVDMAAVHSSCRLCIHIA--TTIWEKEEKDSDAKK--RPCKCN------------------KGSETVYHLYVRERGRFEMDSIFLRSGNMTLKALEVAVLTHFKFRKHVPIWKPERP---ESLRGGD------ELKVHRIYPLGLTQRQALY-----TFKFKG----DADLKNHIENNPCAKFEVIFV 512          
BLAST of NO29G00460 vs. NCBI_GenBank
Match: XP_009391357.1 (PREDICTED: glycoprotein 3-alpha-L-fucosyltransferase A-like isoform X2 [Musa acuminata subsp. malaccensis])

HSP 1 Score: 307.0 bits (785), Expect = 2.000e-79
Identity = 187/466 (40.13%), Postives = 263/466 (56.44%), Query Frame = 0
Query:  462 QTCEAFLEAADQLQYSERRRDFEKSPIRVHKNADNVDIGRCDLKCIYSSGDDYGAYDASYDQTW-PNVPLVKWTMESYTNYPDSEVETAHASGFEIVMTPRLDSEVPCVYFGWSPPDDVFFNPMKLPPVPGAEKENVAAAFISNCGAKSFRLLALQALEAHNVTVHSHGRCANNQP-DIHKDTILPTIKFSLAFENSEELDYVTEKYLQALNFGAVPVVIGAPNIQDFAPSDNSIIHIENEAALPQVAERMLYLMQNDTAYDEMLAWKIDGPSDQFLALIDIGTVGPECRLCLHLADRTRRGEKYRALSAAKNMHRPCACQVPATEGADGRETEEGTNLAESVTIHHLYIRERSTFEFRSLFVRE-PLTVARLHTAILDLY-GAEHQPVWARKRPSYRRKLLDGSWDLTHVQVKIHKVYPAGITWREALYGSLPDQFTVAGNDTMDKALRKWVRQNPCGEVEVTFV 924
            + CE +LE  D + YS   RDF K PI VH      D   C + C +   +D    DA++     P V  +  +MES   YP+++++TA   G+++VMT  L S+VP  YF W+  D        + P+    +E +AAAFISNCGA++FRL AL  LE   + + S+G C  N+  ++ K   L   KFSLAFENS E DYVTEK+ Q+L  G VPVVIGAPNIQDFAPS +SI+HI+  + +  VA+ + YL  N  AY+  L WK +GPSD F AL+D+  V   CRLC+HLA + +  E+     +A   +R C+C                +N+    T++HL++RER  F+  S+++R   LT+  L +AIL  +    H P+W  +RP+    +L G  DL     KIH++YP GIT REALY       T   N+  D  L K ++ NPC ++EV FV
Sbjct:   89 RNCEEWLEREDAVPYS---RDFGKDPILVH--GMQKDWSSCPMDCKFGFAND-KVPDAAFGLPQNPAVAGILRSMESAHYYPENDIDTARRRGYKVVMTTSLSSDVPVGYFSWAEYD-------IMTPMQPKTEEALAAAFISNCGARNFRLQALTMLEESGIKIDSYGSCHRNRDGNVEKVETLKRYKFSLAFENSNEEDYVTEKFFQSLVAGTVPVVIGAPNIQDFAPSPDSILHIKEISDIDSVAKSIRYLATNSDAYNHALRWKHEGPSDSFKALVDMAAVHSSCRLCIHLATKIQEIEE----KSAAFQNRSCSCT---------------SNMG---TVYHLFVRERGRFKMESIYLRSGKLTLKALESAILAKFRSLNHTPIWKNERPT----ILRGGNDL-----KIHRIYPVGITQREALY-------TFRFNN--DAELEKHIKSNPCAKLEVIFV 501          
BLAST of NO29G00460 vs. NCBI_GenBank
Match: XP_012450430.1 (PREDICTED: glycoprotein 3-alpha-L-fucosyltransferase A-like [Gossypium raimondii] >KJB12255.1 hypothetical protein B456_002G008200 [Gossypium raimondii])

HSP 1 Score: 306.6 bits (784), Expect = 2.600e-79
Identity = 192/466 (41.20%), Postives = 259/466 (55.58%), Query Frame = 0
Query:  462 QTCEAFLEAADQLQYSERRRDFEKSPIRVHKNADNVDIGRCDLKCIYSSGDDYGAYDASYD-QTWPNVPLVKWTMESYTNYPDSEVETAHASGFEIVMTPRLDSEVPCVYFGWSPPDDVFFNPMKLPPVPGAEKENVAAAFISNCGAKSFRLLALQALEAHNVTVHSHGRCANNQPD-IHKDTILPTIKFSLAFENSEELDYVTEKYLQALNFGAVPVVIGAPNIQDFAPSDNSIIHIENEAALPQVAERMLYLMQNDTAYDEMLAWKIDGPSDQFLALIDIGTVGPECRLCLHLADRTRRGEKYRALSAAKNMHRPCACQVPATEGADGRETEEGTNLAESVTIHHLYIRERSTFEFRSLFVRE-PLTVARLHTAILDLYG-AEHQPVWARKRPSYRRKLLDGSWDLTHVQVKIHKVYPAGITWREALYGSLPDQFTVAGNDTMDKALRKWVRQNPCGEVEVTFV 924
            +TCE +LE  D L YS   RDF K PI +  + D  D   C + C + S     A DA++        P V  +MES + Y ++ +  A   GFEIVMT  L S+VP  YF W+  D      +  P +P +EK  +AAAFISNC A +FRL AL  LE  N+ + S+GRC  N+ + + K  IL   KFSLAFENS E DYVTEK+ Q+L  G+VPVVIGAPNI+DFAPS +S +HI++   +  +AE+M YL  N  AY+ +L WK +GP+D F AL+D+  V   CRLC+H+A  T   EK    S AK   RPC C         G E           T++HLY+RER  FE  S+F+R   +T+  L  A+L  +   +H P+W  +RP     L  G       ++K+H++YP G+T R+ALY      F   G    D  L+  +  NPC + EV FV
Sbjct:   98 ETCEEWLEREDTLVYS---RDFNKDPIWILISGDKEDFKTCAVNCSFRSNWSRKA-DATFKLPKKSKAPSVHRSMESASYYEENNITQARRDGFEIVMTTSLSSDVPVGYFSWAEYD------IMAPVIPKSEKA-LAAAFISNCMASNFRLEALMELEKENIKIDSYGRCHKNRDERVDKVEILKRYKFSLAFENSNEEDYVTEKFFQSLVAGSVPVVIGAPNIEDFAPSSDSYLHIKDLKDVRSIAEQMKYLAGNPDAYNRLLRWKQEGPTDTFKALVDMAAVHSSCRLCIHIA--TTIWEKEEKDSDAKK--RPCKCN-------KGLE-----------TVYHLYVRERGRFEMDSIFLRSGNMTLKALEVAVLTHFKFRKHVPIWKPERP---ESLRGGD------ELKVHRIYPLGLTQRQALY-----TFKFKG----DADLKNHIENNPCAKFEVIFV 512          
BLAST of NO29G00460 vs. NCBI_GenBank
Match: XP_021896735.1 (glycoprotein 3-alpha-L-fucosyltransferase A [Carica papaya])

HSP 1 Score: 305.4 bits (781), Expect = 5.800e-79
Identity = 188/464 (40.52%), Postives = 259/464 (55.82%), Query Frame = 0
Query:  463 TCEAFLEAADQLQYSERRRDFEKSPIRVHKNADNVDIGRCDLKCIYSSGDDYGAYDASYDQTWPNVPLVKWTMESYTNYPDSEVETAHASGFEIVMTPRLDSEVPCVYFGWSPPDDVFFNPMKLPPVPGAEKENVAAAFISNCGAKSFRLLALQALEAHNVTVHSHGRCANNQPD-IHKDTILPTIKFSLAFENSEELDYVTEKYLQALNFGAVPVVIGAPNIQDFAPSDNSIIHIENEAALPQVAERMLYLMQNDTAYDEMLAWKIDGPSDQFLALIDIGTVGPECRLCLHLADRTRRGEKYRALSAAKNMHRPCACQVPATEGADGRETEEGTNLAESVTIHHLYIRERSTFEFRSLFVRE-PLTVARLHTAILDLY-GAEHQPVWARKRPSYRRKLLDGSWDLTHVQVKIHKVYPAGITWREALYGSLPDQFTVAGNDTMDKALRKWVRQNPCGEVEVTFV 924
            +CE +LE  D + YS   RDF K PI V     + +   C + C +    D     A        +  V  +MES   Y D++++ A   G+++VMT  L S+VP  YF W+  D      +     P  EK  +AAAFISNCGA++FRL AL+ALE  N+ + S+G C  N+   + K   L   KFSLAFENS E DYVTEK+ Q+L  G VPVVIGAPNI+DFAPS  SI+HI+    +  VA+RM YL +N  A+++ L WK +GPSD F AL+D+  V   CRLC+HLA R +  E+     + K   RPC C                T  AE  T++HLYIRER  FE  S+F+R+  +T+  L +A+L  +   +H PVW ++RP    K + G  +L     +I+++YP G+T R+ALY     +F   G    D  LRK + +NPC + EV FV
Sbjct:  108 SCEKWLEREDAVSYS---RDFNKDPIFV--TGGDKEWQSCSVGCKFGFNSDRKPDAAFGTPQQAGISSVLRSMESAQYYSDNDLDNARRRGYDVVMTTSLSSDVPVGYFSWAEYD------IMAAVQPKTEKA-LAAAFISNCGARNFRLQALEALERANIKIDSYGGCHRNRDGRVDKVEALKHYKFSLAFENSNEEDYVTEKFFQSLVAGNVPVVIGAPNIEDFAPSPGSILHIKELGDVESVAKRMKYLAENPDAFNQSLRWKYEGPSDSFKALVDMAAVHSSCRLCIHLATRIQEKEE----KSLKFTSRPCKC----------------TRAAE--TVYHLYIRERGRFEMESIFLRDGNMTLDALESAVLSKFRSMKHVPVWKQERP----KSIRGGDEL-----RIYRIYPVGLTQRQALY-----KFRFEG----DADLRKHIEKNPCAKFEVVFV 519          
BLAST of NO29G00460 vs. NCBI_GenBank
Match: XP_019157851.1 (PREDICTED: glycoprotein 3-alpha-L-fucosyltransferase A-like isoform X1 [Ipomoea nil])

HSP 1 Score: 305.1 bits (780), Expect = 7.600e-79
Identity = 189/469 (40.30%), Postives = 269/469 (57.36%), Query Frame = 0
Query:  462 QTCEAFLEAADQLQYSERRRDFEKSPIRVHKNADNVDIGRCDLKCIYSSGDDYGAY-DASYDQ--TWPNVPLVKWTMESYTNYPDSEVETAHASGFEIVMTPRLDSEVPCVYFGWSPPDDVFFNPMKLPPVPGAEKENVAAAFISNCGAKSFRLLALQALEAHNVTVHSHGRCANNQP-DIHKDTILPTIKFSLAFENSEELDYVTEKYLQALNFGAVPVVIGAPNIQDFAPSDNSIIHIENEAALPQVAERMLYLMQNDTAYDEMLAWKIDGPSDQFLALIDIGTVGPECRLCLHLADRTR-RGEKYRALSAAKNMHRPCACQVPATEGADGRETEEGTNLAESVTIHHLYIRERSTFEFRSLFVRE-PLTVARLHTAI-LDLYGAEHQPVWARKRPSYRRKLLDGSWDLTHVQVKIHKVYPAGITWREALYGSLPDQFTVAGNDTMDKALRKWVRQNPCGEVEVTFV 924
            ++CE +LE  D + Y+   R+F+K PI +   AD+ ++  C + CI   G +Y    DA +    T PN   V  +MES   YPD+ + +A   G+++VMT  L S+VP  YF W+  D      +  P  P  EK  +AAAFISNCG ++FRL A +AL + N+++ S+GRC +N+  +++K   L   KFSLAFENS E DYVTEK+ Q+L  G++PVV+GAPNIQDFAPS  S++HI+  +   +VA  M YL +N +AY++ L WK +GPS  F ALID+G V   CRLC+HLA R R R EK    S      RPC C    T G++              T++H+Y+RER  FE  S+F+R   LT+    +A+ L     +H P+W  +RP    K++ G  +LT     I+++YP G+T R+ALY      F   G    D   R+ +  N C + EV FV
Sbjct:  108 ESCEDWLERVDVVTYT---RNFDKDPILL--RADSEELAYCAVGCIV--GGNYNKQPDAVFGLMITAPNTTRVLRSMESSKYYPDNNIASAKRRGYDVVMTTSLSSDVPVGYFSWAEYD------LMAPLQPKTEKA-LAAAFISNCGGRNFRLPAFEALVSANISIDSYGRCYHNKDGNVNKVEALKRYKFSLAFENSNEEDYVTEKFFQSLVAGSIPVVVGAPNIQDFAPSLGSVLHIKELSDAEKVANTMTYLDENPSAYNQALRWKFEGPSVAFKALIDMGAVHSSCRLCIHLATRIREREEKSPTFS-----KRPCKC----TRGSE--------------TVYHVYVRERGRFEMESIFLRSGNLTMEAFESAVLLKFMSRKHVPIWKEERP----KMIRGGDELT-----IYRIYPLGMTQRQALY-----SFKFEG----DNQFREHIESNLCAKFEVIFV 521          
BLAST of NO29G00460 vs. NCBI_GenBank
Match: XP_019157852.1 (PREDICTED: glycoprotein 3-alpha-L-fucosyltransferase A-like isoform X2 [Ipomoea nil])

HSP 1 Score: 305.1 bits (780), Expect = 7.600e-79
Identity = 189/469 (40.30%), Postives = 269/469 (57.36%), Query Frame = 0
Query:  462 QTCEAFLEAADQLQYSERRRDFEKSPIRVHKNADNVDIGRCDLKCIYSSGDDYGAY-DASYDQ--TWPNVPLVKWTMESYTNYPDSEVETAHASGFEIVMTPRLDSEVPCVYFGWSPPDDVFFNPMKLPPVPGAEKENVAAAFISNCGAKSFRLLALQALEAHNVTVHSHGRCANNQP-DIHKDTILPTIKFSLAFENSEELDYVTEKYLQALNFGAVPVVIGAPNIQDFAPSDNSIIHIENEAALPQVAERMLYLMQNDTAYDEMLAWKIDGPSDQFLALIDIGTVGPECRLCLHLADRTR-RGEKYRALSAAKNMHRPCACQVPATEGADGRETEEGTNLAESVTIHHLYIRERSTFEFRSLFVRE-PLTVARLHTAI-LDLYGAEHQPVWARKRPSYRRKLLDGSWDLTHVQVKIHKVYPAGITWREALYGSLPDQFTVAGNDTMDKALRKWVRQNPCGEVEVTFV 924
            ++CE +LE  D + Y+   R+F+K PI +   AD+ ++  C + CI   G +Y    DA +    T PN   V  +MES   YPD+ + +A   G+++VMT  L S+VP  YF W+  D      +  P  P  EK  +AAAFISNCG ++FRL A +AL + N+++ S+GRC +N+  +++K   L   KFSLAFENS E DYVTEK+ Q+L  G++PVV+GAPNIQDFAPS  S++HI+  +   +VA  M YL +N +AY++ L WK +GPS  F ALID+G V   CRLC+HLA R R R EK    S      RPC C    T G++              T++H+Y+RER  FE  S+F+R   LT+    +A+ L     +H P+W  +RP    K++ G  +LT     I+++YP G+T R+ALY      F   G    D   R+ +  N C + EV FV
Sbjct:  107 ESCEDWLERVDVVTYT---RNFDKDPILL--RADSEELAYCAVGCIV--GGNYNKQPDAVFGLMITAPNTTRVLRSMESSKYYPDNNIASAKRRGYDVVMTTSLSSDVPVGYFSWAEYD------LMAPLQPKTEKA-LAAAFISNCGGRNFRLPAFEALVSANISIDSYGRCYHNKDGNVNKVEALKRYKFSLAFENSNEEDYVTEKFFQSLVAGSIPVVVGAPNIQDFAPSLGSVLHIKELSDAEKVANTMTYLDENPSAYNQALRWKFEGPSVAFKALIDMGAVHSSCRLCIHLATRIREREEKSPTFS-----KRPCKC----TRGSE--------------TVYHVYVRERGRFEMESIFLRSGNLTMEAFESAVLLKFMSRKHVPIWKEERP----KMIRGGDELT-----IYRIYPLGMTQRQALY-----SFKFEG----DNQFREHIESNLCAKFEVIFV 520          
The following BLAST results are available for this feature:
BLAST of NO29G00460 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM21269.14.800e-12662.97glycoprotein 3-alpha-l-fucosyltransferase a [Nanno... [more]
XP_005645422.11.200e-8142.47hypothetical protein COCSUDRAFT_37671 [Coccomyxa s... [more]
XP_006487108.11.200e-7940.13PREDICTED: glycoprotein 3-alpha-L-fucosyltransfera... [more]
XP_016715583.11.200e-7940.99PREDICTED: glycoprotein 3-alpha-L-fucosyltransfera... [more]
PPD69985.11.200e-7940.99hypothetical protein GOBAR_DD33134 [Gossypium barb... [more]
XP_009391357.12.000e-7940.13PREDICTED: glycoprotein 3-alpha-L-fucosyltransfera... [more]
XP_012450430.12.600e-7941.20PREDICTED: glycoprotein 3-alpha-L-fucosyltransfera... [more]
XP_021896735.15.800e-7940.52glycoprotein 3-alpha-L-fucosyltransferase A [Caric... [more]
XP_019157851.17.600e-7940.30PREDICTED: glycoprotein 3-alpha-L-fucosyltransfera... [more]
XP_019157852.17.600e-7940.30PREDICTED: glycoprotein 3-alpha-L-fucosyltransfera... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL061nonsL061Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR038ncniR038Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR081ngnoR081Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK005145NSK005145Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO29G00460.1NO29G00460.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
Naga_100467g1gene9154Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO29G00460.1NO29G00460.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO29G00460 ID=NO29G00460|Name=NO29G00460|organism=Nannochloropsis oceanica|type=gene|length=2928bp
ATGCACCGGCAACAGCAGCCTGACGTGCATTCAACCGGCGCTGCGGCCAG
CGGTGGCGAGAGTGGCGATGACGGTAGGAGAAGCAAGCGAAGAGAATACA
GAAAGCAGCCACTCACAGGATTAGGAGTGCTTGGAAGGAGAGGGAGTGCA
GCAGCACCGATTGGAGGAGGGCGGCGCTTTACAACGGTGCACTTGGTTTT
GACGGCCTTGGTCACCGCGACGGTAGTCTTCTTCTTCACAAGTATGCTGT
TTGTGGATTCGCCGTTGGGAGGAAAGGGCTTTGGGCCCGGCCAGTTTGTG
GCTCGGATACACTCCCTTCCTTCTATTGACGAGGCTGGAAGAGAAGAAGG
GGGGATGAGACAGCTAGTTGAGCAGGAGGAAGAAGGAAGAGGGATGGATA
GCGGCAGTCGCATGGAGGAGGTTGACGGGCGAGAGGCGGCGGTGGAAGAC
AATGGACACGCACTGGGAAAAAGCATGAAAATAAAGAGACGAAATAGGAC
GATGGGAAAGTGGCGCCACAAGGTCTGGAAGGAGGCGGACGAGGAAGATG
AAGAGGGAGATGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAG
GAGGAGGAGGAGGAGGAAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGA
GGAGGAGGAGGATGACGATAAAGAAGAACTTAATGGACATATTGAAAATT
TGGAAGAGGAGAAGGCTGATGAGAAGGGGATACTGGGACGAGGAAGAGGA
AAGGATGATGATATCATGGTAGATGATGATGATATGACAGGAACCGAGAC
AAGATGGTTTAGAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGG
AGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAG
GAGGAGGAGGAGAAGGAGGAGGAGGCAGGGCGAAAGAGACGAGAAACAAG
TTTGCGGCGTGATAACAAGGAGGCAAAATATCAAAAGAAGGGGGAGGCAT
GGTCTGGAGAGGAAGACTTGAAGGAGAAAGAGCAAAACGGGGGCTTTGAC
CTCGAAAAGGAGGATGGTGCGATATCCATTGGGGAAGACGACGTGGAAGA
GGAGGAGGAGGACGGGGAAGGTGATGGTAAGGAGAAGACGCAGAGACCTG
CTCGGGGAGAATCTATGCCGTTGGCCAAAATCCCCGCCTTTGGTGGGAAG
CTCGACAAGAAGCCAGCAGGGACATCGCCGACAGCAGCAGCAGCAGCAGC
AGCAGCAAAAACTGCAGCAGACGTGCCCTCAGCTGCATTAGGTGCTGTAT
CGAAGGAAGAAATTGTGGCCACGGCAACGAAGAAAAAGAGGATCAAGACT
CCGCCTCCATCCGTACCTGTCGCTCCTGCTGGTCAAACTTGCGAGGCCTT
CCTGGAAGCTGCCGACCAACTGCAATACTCTGAAAGACGACGGGATTTCG
AAAAGTCGCCCATTCGAGTGCATAAGAATGCGGATAATGTCGATATTGGG
AGGTGCGATCTGAAGTGCATCTATTCAAGTGGGGACGACTATGGCGCTTA
TGATGCCAGTTACGATCAAACGTGGCCAAATGTTCCTCTGGTGAAGTGGA
CCATGGAAAGCTACACCAATTACCCAGATTCGGAGGTAGAAACTGCCCAC
GCGAGTGGCTTTGAGATTGTCATGACCCCGCGCTTGGACTCGGAGGTCCC
GTGCGTCTACTTTGGCTGGTCTCCGCCAGACGATGTGTTTTTCAACCCCA
TGAAGCTTCCACCTGTTCCGGGGGCGGAGAAAGAGAACGTGGCCGCAGCA
TTCATCAGgtatgcttactttcgtagcaaggggtataatggtgggaatgt
tctagtatcatgcgtgggatgactgcctctgtgactcgtgctgaggaagt
tttccttcctcgtactcatttacctcccatctcttacgcttattctctcc
tttcctccacccagCAATTGCGGCGCTAAGTCCTTTCGCCTCTTGGCTCT
TCAAGCATTGGAAGCACACAATGTGACCGTCCACTCCCATGGGCGCTGCG
CCAACAATCAGCCAGACATCCACAAGGACACAATCTTGCCGACGATCAAG
TTCTCCTTAGCCTTCGAAAACAGTGAGGAGCTCGATTACGTCACCGAAAA
ATACTTGCAAGCCCTCAATTTCGGTGCAGTTCCCGTCGTGATCGGCGCTC
CCAACATCCAGGATTTCGCGCCCAGTGATAATTCCATCATCCATATTGAA
AACGAGGCGGCCCTTCCACAAGTCGCGGAGCGCATGCTCTACCTGATGCA
GAACGATACTGCATATGATGAGATGCTGGCTTGGAAGATTGATGGACCAT
CCGACCAATTCCTGGCTTTGATTGACATTGGAACCGTTGGTCCTGAATGT
CGCCTGTGCTTGCATCTCGCAGATCGGACGAGGCGGGGGGAAAAGTACAG
AGCACTTTCGGCGGCAAAGAACATGCACCGGCCCTGCGCCTGCCAGGTTC
CCGCAACAGAGGGAGCGGATGGGAGAGAAACCGAGGAGGGCACAAATTTG
GCCGAATCAGTGACGATTCACCATCTTTACATCAGAGAACGGTCCACATT
CGAGTTCCGATCATTATTTGTCCGAGAGCCCTTGACGGTGGCTCGGCTAC
ACACCGCGATCCTAGACTTGTATGGCGCTGAGCACCAGCCTGTGTGGGCT
CGTAAACGCCCGAGCTACCGACGGAAGCTCTTGGACGGGTCCTGGGACTT
GACACACGTGCAGGTGAAAATTCATAAAGTCTATCCGGCGGGGATTACGT
GGAGGGAGGCTTTGTACGGGTCGCTTCCAGACCAGTTTACAGTCGCAGGG
AATGACACCATGGACAAGGCGTTGCGGAAGTGGGTGAGGCAGAACCCGTG
TGGAGAAGTGGAGGTGACGTTCGTATAA
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protein sequence of NO29G00460.1

>NO29G00460.1-protein ID=NO29G00460.1-protein|Name=NO29G00460.1|organism=Nannochloropsis oceanica|type=polypeptide|length=924bp
MHRQQQPDVHSTGAAASGGESGDDGRRSKRREYRKQPLTGLGVLGRRGSA
AAPIGGGRRFTTVHLVLTALVTATVVFFFTSMLFVDSPLGGKGFGPGQFV
ARIHSLPSIDEAGREEGGMRQLVEQEEEGRGMDSGSRMEEVDGREAAVED
NGHALGKSMKIKRRNRTMGKWRHKVWKEADEEDEEGDEEEEEEEEEEEEE
EEEEEEEEEEEEEEEEEEEEDDDKEELNGHIENLEEEKADEKGILGRGRG
KDDDIMVDDDDMTGTETRWFREEEEEEEEEEEEEEEEEEEEEEEEEEEEE
EEEEKEEEAGRKRRETSLRRDNKEAKYQKKGEAWSGEEDLKEKEQNGGFD
LEKEDGAISIGEDDVEEEEEDGEGDGKEKTQRPARGESMPLAKIPAFGGK
LDKKPAGTSPTAAAAAAAAKTAADVPSAALGAVSKEEIVATATKKKRIKT
PPPSVPVAPAGQTCEAFLEAADQLQYSERRRDFEKSPIRVHKNADNVDIG
RCDLKCIYSSGDDYGAYDASYDQTWPNVPLVKWTMESYTNYPDSEVETAH
ASGFEIVMTPRLDSEVPCVYFGWSPPDDVFFNPMKLPPVPGAEKENVAAA
FISNCGAKSFRLLALQALEAHNVTVHSHGRCANNQPDIHKDTILPTIKFS
LAFENSEELDYVTEKYLQALNFGAVPVVIGAPNIQDFAPSDNSIIHIENE
AALPQVAERMLYLMQNDTAYDEMLAWKIDGPSDQFLALIDIGTVGPECRL
CLHLADRTRRGEKYRALSAAKNMHRPCACQVPATEGADGRETEEGTNLAE
SVTIHHLYIRERSTFEFRSLFVREPLTVARLHTAILDLYGAEHQPVWARK
RPSYRRKLLDGSWDLTHVQVKIHKVYPAGITWREALYGSLPDQFTVAGND
TMDKALRKWVRQNPCGEVEVTFV*
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Synonyms
Publications