NO29G00430, NO29G00430 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO29G00430 vs. NCBI_GenBank
Match: OQR97012.1 (DNA repair protein RAD5, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin [Achlya hypogyna]) HSP 1 Score: 171.0 bits (432), Expect = 6.300e-39 Identity = 89/160 (55.62%), Postives = 113/160 (70.62%), Query Frame = 0 Query: 182 PPKKAVIFSQWTGMLDLVSRALAHKQIIFVRLDGRTSQQQRGHVLREFASNDEVRVMVLSLRAGGVGLNLTSANVVMLLDPWWNPALEDQAIDRVHRLGQLRDTVHILRFTVKDTVEQQMLVVQEKKAAVARSALACGAGGGDKDGKEGRLSLDDLRKFF 342 P +K V+FSQWT ML+LV L+ VR DG Q+ R VL EF+ D +V+V+SL+AGGVGLNLT+A+VV+LLDPWWNPALEDQA+DRVHRLGQ D + + ++ V+DTVE +L +QE+KA +A + LA G D D GRLSL DL KFF Sbjct: 834 PHRKVVVFSQWTHMLELVQTTLSQHGFSHVRFDGSLKQEDRERVLNEFSRGD-AQVLVISLKAGGVGLNLTAASVVILLDPWWNPALEDQAVDRVHRLGQESDVI-VKKYVVEDTVEDMILQLQERKATMASTVLATAKPGSDSD---GRLSLSDLLKFF 988
BLAST of NO29G00430 vs. NCBI_GenBank
Match: XP_008615200.1 (hypothetical protein SDRG_10961 [Saprolegnia diclina VS20] >EQC31359.1 hypothetical protein SDRG_10961 [Saprolegnia diclina VS20]) HSP 1 Score: 168.7 bits (426), Expect = 3.100e-38 Identity = 93/167 (55.69%), Postives = 111/167 (66.47%), Query Frame = 0 Query: 175 EELPLSLPPKKAVIFSQWTGMLDLVSRALAHKQIIFVRLDGRTSQQQRGHVLREFASNDEVRVMVLSLRAGGVGLNLTSANVVMLLDPWWNPALEDQAIDRVHRLGQLRDTVHILRFTVKDTVEQQMLVVQEKKAAVARSALACGAGGGDKDGKEGRLSLDDLRKFF 342 E L S P +K V+FSQWT MLDLV L VR DG Q +R VL EF S V+V+SL+AGGVGLNLT+A+VV+LLDPWWNPALEDQAIDRVHRLGQ D + + ++ V DTVE +L +QE+KA +A + LA G D D GRL L DL KFF Sbjct: 843 EALRASEPHRKVVVFSQWTHMLDLVGSTLNQHGFSTVRFDGSLKQDERERVLLEF-SRGSANVLVISLKAGGVGLNLTAASVVVLLDPWWNPALEDQAIDRVHRLGQEHDVI-VKKYVVDDTVEDMILQLQERKATMASTVLATSKPGADSD---GRLGLADLLKFF 1004
BLAST of NO29G00430 vs. NCBI_GenBank
Match: XP_012196140.1 (hypothetical protein SPRG_02199 [Saprolegnia parasitica CBS 223.65] >KDO33392.1 hypothetical protein SPRG_02199 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 168.7 bits (426), Expect = 3.100e-38 Identity = 93/167 (55.69%), Postives = 111/167 (66.47%), Query Frame = 0 Query: 175 EELPLSLPPKKAVIFSQWTGMLDLVSRALAHKQIIFVRLDGRTSQQQRGHVLREFASNDEVRVMVLSLRAGGVGLNLTSANVVMLLDPWWNPALEDQAIDRVHRLGQLRDTVHILRFTVKDTVEQQMLVVQEKKAAVARSALACGAGGGDKDGKEGRLSLDDLRKFF 342 E L S P +K V+FSQWT MLDLV L VR DG Q +R VL EF S V+V+SL+AGGVGLNLT+A+VV+LLDPWWNPALEDQAIDRVHRLGQ D + + ++ V DTVE +L +QE+KA +A + LA G D D GRL L DL KFF Sbjct: 845 EALRASEPHRKVVVFSQWTHMLDLVGSTLNQHGFSTVRFDGSLKQDERERVLSEF-SRGSANVLVISLKAGGVGLNLTAASVVVLLDPWWNPALEDQAIDRVHRLGQDHDVI-VKKYVVDDTVEDMILQLQERKATMASTVLATSKPGADSD---GRLGLADLLKFF 1006
BLAST of NO29G00430 vs. NCBI_GenBank
Match: OQS03123.1 (DNA repair protein RAD5, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin [Thraustotheca clavata]) HSP 1 Score: 167.9 bits (424), Expect = 5.400e-38 Identity = 85/160 (53.12%), Postives = 113/160 (70.62%), Query Frame = 0 Query: 182 PPKKAVIFSQWTGMLDLVSRALAHKQIIFVRLDGRTSQQQRGHVLREFASNDEVRVMVLSLRAGGVGLNLTSANVVMLLDPWWNPALEDQAIDRVHRLGQLRDTVHILRFTVKDTVEQQMLVVQEKKAAVARSALACGAGGGDKDGKEGRLSLDDLRKFF 342 P +K V+FSQWT ML+LV L+H VR DG +R VL EF ++ +V+V+SL+AGGVGLNLT+A+VV++LDPWWNPALEDQA+DR+HRLGQ+ D + + ++ V DTVE +L +Q +KA++A + LA G D D GRLSL DL KFF Sbjct: 667 PHRKVVVFSQWTHMLELVENTLSHNGYSHVRFDGSLKHDERERVLNEF-NDGSTQVLVISLKAGGVGLNLTAASVVIILDPWWNPALEDQAVDRIHRLGQMHDVI-VKKYKVIDTVEDMILQLQARKASMASTVLATAKTGADND---GRLSLSDLLKFF 821
BLAST of NO29G00430 vs. NCBI_GenBank
Match: XP_008861217.1 (hypothetical protein H310_00284 [Aphanomyces invadans] >ETW09806.1 hypothetical protein H310_00284 [Aphanomyces invadans]) HSP 1 Score: 167.2 bits (422), Expect = 9.100e-38 Identity = 86/158 (54.43%), Postives = 110/158 (69.62%), Query Frame = 0 Query: 184 KKAVIFSQWTGMLDLVSRALAHKQIIFVRLDGRTSQQQRGHVLREFASNDEVRVMVLSLRAGGVGLNLTSANVVMLLDPWWNPALEDQAIDRVHRLGQLRDTVHILRFTVKDTVEQQMLVVQEKKAAVARSALACGAGGGDKDGKEGRLSLDDLRKFF 342 +K V+FSQWT MLDLV L R DG Q R VL F SN +V+V+V+SL+AGGVGLNLT+A+VV+++DPWWNP +EDQAIDRVHRLGQ RD V + ++ V+DTVE +L +Q++KA +A + LA G + D GRLSL DL KFF Sbjct: 840 RKVVVFSQWTHMLDLVETTLQQHGYSHCRFDGSLKQDDRERVLHRFNSNPDVQVLVISLKAGGVGLNLTAASVVIMMDPWWNPGIEDQAIDRVHRLGQTRD-VLVKKYIVEDTVEGMILQLQQRKATLASTVLATSKSGAEND---GRLSLADLLKFF 993
BLAST of NO29G00430 vs. NCBI_GenBank
Match: GAY01548.1 (DNA repair protein RAD5, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin, putative [Pythium insidiosum]) HSP 1 Score: 165.6 bits (418), Expect = 2.700e-37 Identity = 85/174 (48.85%), Postives = 117/174 (67.24%), Query Frame = 0 Query: 168 REDEDGKEELPLSLPPKKAVIFSQWTGMLDLVSRALAHKQIIFVRLDGRTSQQQRGHVLREFASNDEVRVMVLSLRAGGVGLNLTSANVVMLLDPWWNPALEDQAIDRVHRLGQLRDTVHILRFTVKDTVEQQMLVVQEKKAAVARSALACGAGGGDKDGKEGRLSLDDLRKFF 342 +E D E + + +K V+FSQWT ML++V++ L + I G +Q R VLR F+++++V V+V+SLRAGGVGLNLT A+VV+LLDPWWNP +EDQAIDRVHRLGQ RD V + R+ V++TVE +L +Q++KA +AR L G D RLS++DL FF Sbjct: 886 QEIHDENERIEVPAQRRKVVVFSQWTHMLEMVAQLLRDRGIGHAVFHGSMAQDARERVLRRFSADNDVEVLVISLRAGGVGLNLTRASVVLLLDPWWNPGVEDQAIDRVHRLGQTRD-VLVRRYVVRETVEDMILQLQQRKARLARHVLVASNRSGTDDQSSDRLSMEDLLAFF 1058
BLAST of NO29G00430 vs. NCBI_GenBank
Match: XP_024575280.1 (dna repair protein swi snf-related matrix-associated actin-dependent regulator of [Plasmopara halstedii] >CEG38911.1 dna repair protein swi snf-related matrix-associated actin-dependent regulator of [Plasmopara halstedii]) HSP 1 Score: 162.2 bits (409), Expect = 2.900e-36 Identity = 78/158 (49.37%), Postives = 109/158 (68.99%), Query Frame = 0 Query: 184 KKAVIFSQWTGMLDLVSRALAHKQIIFVRLDGRTSQQQRGHVLREFASNDEVRVMVLSLRAGGVGLNLTSANVVMLLDPWWNPALEDQAIDRVHRLGQLRDTVHILRFTVKDTVEQQMLVVQEKKAAVARSALACGAGGGDKDGKEGRLSLDDLRKFF 342 +K V+FSQWT MLD+VSR L + DG +Q+ R VL +F ++ + V+V+SL+AGGVGLNLT A+VV+LLDPWWNP +E QA+DRVHRLGQ RD + + R+ +KDTVE +L +Q++K +A+ L D+ + R++LDDLR FF Sbjct: 911 RKVVVFSQWTSMLDMVSRLLTRHSFSHCKFDGGLNQEARERVLTKFTNDPNIEVLVISLKAGGVGLNLTCASVVILLDPWWNPGVEKQAVDRVHRLGQTRDVI-VKRYVIKDTVEDMILQLQQRKELLAKHVLVVAKAHDDR--RSERINLDDLRTFF 1065
BLAST of NO29G00430 vs. NCBI_GenBank
Match: XP_009533794.1 (hypothetical protein PHYSODRAFT_317996 [Phytophthora sojae] >EGZ11049.1 hypothetical protein PHYSODRAFT_317996 [Phytophthora sojae]) HSP 1 Score: 159.8 bits (403), Expect = 1.500e-35 Identity = 80/158 (50.63%), Postives = 108/158 (68.35%), Query Frame = 0 Query: 184 KKAVIFSQWTGMLDLVSRALAHKQIIFVRLDGRTSQQQRGHVLREFASNDEVRVMVLSLRAGGVGLNLTSANVVMLLDPWWNPALEDQAIDRVHRLGQLRDTVHILRFTVKDTVEQQMLVVQEKKAAVARSALACGAGGGDKDGKEGRLSLDDLRKFF 342 +K V+FSQWT MLD+VSR L +G +Q QR VL +FA + V V+V+SL+AGGVGLNLT A+VV+LLDPWWNP +EDQA+DRVHRLGQ +D + + R+ V DTVE +L +Q++K +A+ L ++ + RL+LDDLR FF Sbjct: 902 RKVVVFSQWTSMLDMVSRLLQRHGFSHCTFNGALNQGQRERVLTKFAKDPSVEVLVISLKAGGVGLNLTCASVVILLDPWWNPGVEDQAVDRVHRLGQTQDVI-VKRYVVNDTVEDMILQLQQRKEKLAKHVLVVAKAHDER--RSERLNLDDLRSFF 1056
BLAST of NO29G00430 vs. NCBI_GenBank
Match: XP_006652864.1 (PREDICTED: helicase-like transcription factor CHR28 [Oryza brachyantha]) HSP 1 Score: 159.8 bits (403), Expect = 1.500e-35 Identity = 88/199 (44.22%), Postives = 126/199 (63.32%), Query Frame = 0 Query: 144 DSVHCADKERRTKPPSMNVKDEEGREDEDGKEELPLSLPPKKAVIFSQWTGMLDLVSRALAHKQIIFVRLDGRTSQQQRGHVLREFASNDEVRVMVLSLRAGGVGLNLTSANVVMLLDPWWNPALEDQAIDRVHRLGQLRDTVHILRFTVKDTVEQQMLVVQEKKAAVARSALACGAGGGDKDGKEG-RLSLDDLRKFF 342 +S + + K R ++ + D E P + P KA++FSQWTGMLDL+ +L + +I F RLDG S R ++EF ++ EVRVM++SL+AG +GLN+ +A V+++DPWWNP EDQA+DR HR+GQ+R V + R T+KDTVE ++L +QEKK + +SA GGDK G RL+LDDL+ F Sbjct: 872 ESSYISSKIRSATDILNSIVNTHALTGSDTIESNPSEVAPPKAIVFSQWTGMLDLLELSLDNYRIKFRRLDGAMSLNLREKAVKEFNTDPEVRVMLMSLKAGNLGLNMVAACHVIMIDPWWNPYAEDQAVDRAHRIGQIR-PVTVSRLTIKDTVEDRILALQEKKRKMVQSAF-----GGDKPGGNATRLTLDDLQYLF 1064
BLAST of NO29G00430 vs. NCBI_GenBank
Match: ETI54510.1 (hypothetical protein F443_02648 [Phytophthora parasitica P1569] >ETK94407.1 hypothetical protein L915_02530 [Phytophthora parasitica] >ETL47783.1 hypothetical protein L916_02502 [Phytophthora parasitica] >ETM00897.1 hypothetical protein L917_02436 [Phytophthora parasitica] >ETM54074.1 hypothetical protein L914_02525 [Phytophthora parasitica] >ETO83262.1 hypothetical protein F444_02649 [Phytophthora parasitica P1976] >ETP24341.1 hypothetical protein F441_02610 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 159.5 bits (402), Expect = 1.900e-35 Identity = 79/158 (50.00%), Postives = 110/158 (69.62%), Query Frame = 0 Query: 184 KKAVIFSQWTGMLDLVSRALAHKQIIFVRLDGRTSQQQRGHVLREFASNDEVRVMVLSLRAGGVGLNLTSANVVMLLDPWWNPALEDQAIDRVHRLGQLRDTVHILRFTVKDTVEQQMLVVQEKKAAVARSALACGAGGGDKDGKEGRLSLDDLRKFF 342 +K VIFSQWT MLD+VS+ L +G +Q+ R VL +FA + +V V+V+SL+AGGVGLNLT A+VV+LLDPWWNP +E+QA+DRVHRLGQ +D + + R+ VKDTVE +L +Q++K +A+ L ++ + RL+LDDLR FF Sbjct: 960 RKVVIFSQWTSMLDMVSQLLTRHGFTHCTFNGGLNQEARERVLTKFAKDPDVEVLVISLKAGGVGLNLTCASVVILLDPWWNPGVEEQAVDRVHRLGQTQDVI-VKRYVVKDTVEDMILQLQQRKEKLAKHVLVVAKAHDER--RSERLNLDDLRSFF 1114 The following BLAST results are available for this feature:
BLAST of NO29G00430 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO29G00430 ID=NO29G00430|Name=NO29G00430|organism=Nannochloropsis oceanica|type=gene|length=1143bpback to top protein sequence of NO29G00430.1 >NO29G00430.1-protein ID=NO29G00430.1-protein|Name=NO29G00430.1|organism=Nannochloropsis oceanica|type=polypeptide|length=342bpback to top Synonyms
Publications
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