NO29G00330, NO29G00330 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO29G00330 vs. NCBI_GenBank
Match: EWM21260.1 (hypothetical protein Naga_101302g1 [Nannochloropsis gaditana]) HSP 1 Score: 183.3 bits (464), Expect = 1.600e-42 Identity = 115/204 (56.37%), Postives = 136/204 (66.67%), Query Frame = 0 Query: 18 PPPYLYSAVPLLFLVAFILPKLHAFLPVSPYSTSTSXXXXXXALQAKKPSTKKXXGTGASTVKGFGSXXXXXXXXXXXT-VQHPLLKDKGHLALIDWIQTQGGLINHLAVASIQPYNIRGIVALKPFKKGDIIISIPYSLALDVTPPSLPSSSST--LADPIPAALELLRQLDDEEIKARYAPYLAMIPSATTKQGEGGYGLTT 219 P LY V + L ++P AFL VSP S XXXXXX X TG STVKGFGS + H LL+D+GHL+LIDW+Q +GG INHL VAS+QP NIRGIV LKPFKKG+ IISIPY+LA+DVTP +L S++ LADP+PAALELL+QLDD A YAPYLAM+PS T K+GEGGYG+TT Sbjct: 4 PRSSLYRFVFHVCLGLSLVPDCPAFL-VSPPSFXXXXXXXXXXXXXXXXXXXXXGATGPSTVKGFGSSKPSPSSSSSFPGLPHTLLRDQGHLSLIDWVQQRGGEINHLGVASVQPQNIRGIVTLKPFKKGETIISIPYALAIDVTPTALSPSAAAPKLADPVPAALELLKQLDDPAFAAAYAPYLAMVPSPTAKEGEGGYGMTT 206
BLAST of NO29G00330 vs. NCBI_GenBank
Match: XP_002289165.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED92702.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 141.0 bits (354), Expect = 9.000e-30 Identity = 103/297 (34.68%), Postives = 144/297 (48.48%), Query Frame = 0 Query: 103 KDKGHLALIDWIQTQGGLIN-------HLAVASIQPYNIRGIVALKPFKKGDIIISIPYSLALDVTPPSLPSSSSTLADPIPAALELLRQ-------LDDEEIKARYAPYLAMIPSATTKQGEGGYGLTTDFFTKSELESLQWPPTLVET-------NNRIQRTQEAAKE-------GGREEGL---------VRWAVWMVVSRSLGIAPALLGEGEGGRGGGRSGQRQVLIPFLDLCNHDEGSPHVLTGR--EGGMLKVVAGREVGVGEEVAFAYGGGQLTSDRFVQDYGFLEEKG 361 + K L D++Q G N + S IRG++AL+ KG+ II IPY +ALD+ S ADP A LL+Q D ++K R Y AM+P+ + G +TDFF++S LE +Q P + ET R +R E + G EEG ++WA W++ SR L + G E + ++LIP +D+CNHD SPH+LTGR GG LKV+AG +V G+ + YGGG +DRF+QDYGFL+E G Sbjct: 39 RSKSALTFYDYLQNNGASSNLKRVGLGQFPLPSSPSTTIRGVIALRDISKGEPIIEIPYEMALDLGRES--------ADPTLPATTLLQQYCQWKSGADGPDMKGR-GDYFAMLPTYMSADCLG----STDFFSESALEMMQSPIVVEETLLRRQLVEARYERDIETMAQMSSNLYRWGNEEGSGSSIATLSHLQWATWLITSRVLTVQ----GSPE------ETVAHRLLIPLIDMCNHDRDSPHLLTGRAMPGGTLKVLAGTDVKAGDAIDIGYGGGVEGNDRFIQDYGFLDEGG 312
BLAST of NO29G00330 vs. NCBI_GenBank
Match: OEU16495.1 (SET domain-containing protein [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 139.8 bits (351), Expect = 2.000e-29 Identity = 97/250 (38.80%), Postives = 136/250 (54.40%), Query Frame = 0 Query: 134 IRGIVALKPFKKGDIIISIPYSLALDV----TPPSLPSSS------STLADPIPAALELLRQLDDEEIKARYAPYLAMIPSATTKQGEGGYGLTTDFFTKSELESLQWPPTLVETNNRIQR------TQEAAKEGGRE--------EGLVRWAVWMVVSRSLGIAPALLGEGEGGRGGGRSGQRQVLIPFLDLCNHDEGSPHVLTGR--EGGMLKVVAGREVGVGEEVAFAYGGGQLTSDRFVQDYGFLE 358 IRGIVALKP KKGD II IPY A++ + P+LP+ + TLA ++ + + +++++I + A Y M+P QGE +T FF+ L LQ+P + ET R +R + A E + E + WAVW++ SR L + G+ E G+ ++LIPFLD+CNHD SPHVLTGR GG LKVVAG + G+ + YGGG +DRF+QDYGFL+ Sbjct: 77 IRGIVALKPIKKGDTIIRIPYEQAVNFGQEGSDPTLPAVAFLKDYCETLASSSSSSTDEVDAIENKKISGK-ASYYQMLPKF---QGEDCMS-STGFFSDRALTELQYPLIVEETEKRKERICSRFQSDIANNENFPKWLDGSPIIEDQLAWAVWLITSRVLTVQ----GDAEEGK------SYRLLIPFLDMCNHDRSSPHVLTGRAVPGGELKVVAGASIKEGDAINIGYGGGVAGNDRFLQDYGFLD 311
BLAST of NO29G00330 vs. NCBI_GenBank
Match: KOO30594.1 (histone-lysine n-methyltransferase [Chrysochromulina sp. CCMP291]) HSP 1 Score: 138.7 bits (348), Expect = 4.500e-29 Identity = 91/276 (32.97%), Postives = 140/276 (50.72%), Query Frame = 0 Query: 101 LLKDKGHLALIDWIQTQGGLINHLAVASIQPY--NIRGIVALKPFKKGDIIISIPYSLALDVTPPSLPSSSSTLADPIPAALELLRQLDDEEIKARYAPYLAMIPSATTKQGEGGYGLTTDFFTKSELESLQWPPTLVETNNRIQRTQEAAKEGGREEGL--------------VRWAVWMVVSRSLGIA-PALLGEGEGGRGGGRSGQRQVLIPFLDLCNHDEGSPHVLTGREGGMLKVVAGREVGVGEEVAFAYGGGQLTSDRFVQDYGFLEEK 360 LL + + AL +W+++ + +L I + +RG++AL+ G+ I++IP +LA+D+ + DP+PAA L ++ + YA Y A++P + T DFF++ EL+ LQWPP +VET R + ++A E G +RWAVW ++SR L +A P L G ++LIP +D+ NH GS H LTGR GML+VVAG V GE++ YG Q ++ FV YGF++ K Sbjct: 53 LLDEPRYTALYEWLRSSP--LTNLKKVGIAEFEGGLRGVMALQDIMAGEEIVAIPATLAIDLGADGV--------DPLPAARRFLGEMHG-DTDGEYAAYWAVLPPP-----DAADLCTPDFFSEKELQMLQWPPLVVETRKRSAQLRKALGERAPNSGTPNDVMAVAGGNMRELRWAVWTILSRVLTVADPTDL------------GGHKLLIPLIDMFNHRGGSKHYLTGRTDGMLRVVAGATVKAGEQIFIKYGTDQTSNVEFVAHYGFVDPK 300
BLAST of NO29G00330 vs. NCBI_GenBank
Match: XP_005770147.1 (hypothetical protein EMIHUDRAFT_102428 [Emiliania huxleyi CCMP1516] >EOD17718.1 hypothetical protein EMIHUDRAFT_102428 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 129.8 bits (325), Expect = 2.100e-26 Identity = 88/265 (33.21%), Postives = 131/265 (49.43%), Query Frame = 0 Query: 102 LKDKGHLALIDWIQTQGGLINHLAVASIQPYNIRGIVALKPFKKGDIIISIPYSLALDVTPPSLPSSSSTLADPIPAALELLRQLDDEEIKARYAPYLAMIPSATTKQGEGGYGLTTDFFTKSELESLQWPPTLVETNNRIQRTQEAAKEGGREEG---------LVRWAVWMVVSRSLGIAPALLGEGEGGRGGGRSGQRQVLIPFLDLCNHDEGSPHVLTGREGGMLKVVAGREVGVGEEVAFAYGGGQLTSDRFVQDYGFLE 358 L D + +L W++ +G + +A+A +RG++A + G+ I+++P A+D+ + DP+PAA LL + AR PY A +P Q + T DF+ ++ LE QWPP E R + A GG EG ++WAVW+V SR L + +G GRG ++LIP+LD+ NH SPH L GR GML+V+AG VG GE+V YG ++ F+ YGFL+ Sbjct: 36 LVDPAYESLRGWLEAEGAKLGAVAIADFG--GLRGLMATRRIDAGEEIVAVPARCAVDL--------GAQGDDPLPAARALLEARARDAGGAR-EPYYATLP-----QPDSPDLCTPDFWGEATLELCQWPPLAEEVRRRAADIESALGGGGEGEGGAAGEAARRELQWAVWLVQSRVLTV------QGADGRG------HKLLIPWLDMFNHRASSPHRLAGRTDGMLRVLAGAPVGAGEQVEIVYGTSGTSNAEFLGHYGFLD 272
BLAST of NO29G00330 vs. NCBI_GenBank
Match: XP_005828259.1 (hypothetical protein GUITHDRAFT_112741 [Guillardia theta CCMP2712] >EKX41279.1 hypothetical protein GUITHDRAFT_112741 [Guillardia theta CCMP2712]) HSP 1 Score: 129.4 bits (324), Expect = 2.700e-26 Identity = 88/301 (29.24%), Postives = 145/301 (48.17%), Query Frame = 0 Query: 69 KKXXGTGASTVKGFGSXXXXXXXXXXXTVQHPLLKDKGHLALIDWIQTQGGLINHLAVASIQPYNIRGIVALKPFKKGDIIISIPYSLALDVTPPSLPSSSSTLADPIPAALELLRQLDDEEIKAR--YAPYLAMIPSATTKQGEGGYGLTTDFFTKSELESLQWPPTLVETNNRI---QRTQEAAKEG-------GREEGLVRWAVWMVVSRSLGIAPALLGEGEGGRGGGRSGQRQVLIPFLDLCNHDEGSPHVLTGREGGMLKVVAGREVGVGEEVAFAYGGGQLTSDRFVQDYGFLE 358 KK GA KGFG+ + + W++ G ++ +A+A +RG+ A K ++G++I+SIP + L++ S +P AA +L+R DEE + + P+ M+P TT+F++++EL +L+W + ET +R+ + T EA++ G EE L W V+ +VSR L I G + LIP +D+ NHD SPH L G+ +++AG+++ G+++ F YGGG L +DR +QDYGF+E Sbjct: 8 KKSPKKGAPVAKGFGAKPTLAG-------KASRIDSADSERFFQWLKAGGASVSKVAIADFD--GLRGVAAEKNIEEGEVIVSIPRDICLNL--------GSDGVNPGYAAAQLVRIEKDEERRRNGWFQPFFDMLPKYEQCD-------TTEFYSENELNALEWDAVIQETKSRVAMLRSTYEASQVGLSNDIKFTWEEFL--WGVYQIVSRVLTIYT------------NEDGAVKYLIPMIDMFNHDAASPHQLKATRDGLFQIIAGKKIFAGQQINFPYGGGNLNNDRIIQDYGFVE 270
BLAST of NO29G00330 vs. NCBI_GenBank
Match: EJK50107.1 (hypothetical protein THAOC_30954 [Thalassiosira oceanica]) HSP 1 Score: 119.8 bits (299), Expect = 2.100e-23 Identity = 91/251 (36.25%), Postives = 122/251 (48.61%), Query Frame = 0 Query: 134 IRGIVALKPFKKGDIIISIPYSLALDVTPPSLPSSSSTLADPIPAALELLRQLDDEEIKARYAP-------YLAMIPSATTKQGEGGYGLTTDFFTKSELESLQWPPTLVETNNRIQ------------RTQEAAK------EGGREEGLVRWAVWMVVSRSLGIAPALLGEGEGGRGGGRSGQRQVLIPFLDLCNHDEGSPHVLTGR--EGGMLKVVAGREVGVGEEVAFAYGGGQLTSDRFVQDYGFLE 358 +RG++ALK KGD II IPY +ALD+ S ADP A L++ A P Y M+P + G +TDFF+ S L+ LQ P ET R + TQ ++ E E+ L WA W++ SR L + G E S ++LIP +D+CNH SPH+LTGR GG+LKVVAG +V G+ + YGGG +DRF+QDYGFL+ Sbjct: 125 LRGVIALKDISKGDPIIEIPYRMALDLGRES--------ADPTLPATAFLQKYCAWRSGADVPPGDRDRGDYFDMLPPFLSDDCLG----STDFFSDSALDMLQSPMVKEETLERKKLVKLRYERDIESMTQMSSNLYQWDGEAATEDHL-HWASWIITSRVLTVQ----GPPES------SFSNRLLIPLIDMCNHSRESPHILTGRAMPGGLLKVVAGVDVKAGDAIDICYGGGVEGNDRFIQDYGFLD 352
BLAST of NO29G00330 vs. NCBI_GenBank
Match: XP_002287161.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED94604.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 90.1 bits (222), Expect = 1.800e-14 Identity = 66/238 (27.73%), Postives = 119/238 (50.00%), Query Frame = 0 Query: 133 NIRGIVALKPFKKGDIIISIPYSLALDVTPPSLPSSSSTLADPIPAALELLR-QLDDEEIKARYAPYLAMIPSATTKQGEGGYGLTTDFFTKSELESLQWPPTLVETNNRIQRTQEAAKEGGREEGLVRWAVWMVVSRS----LGIAPALLGEGEGGRGGGRSGQRQVLIPFLDLCNHD----EGSPHVL-TGREGGMLKVVAGREVGVGEEVAFAYG-GGQLTSDRFVQDYGFLEEK 360 NIRG+ A +PFKK +II IP AL + PS+ + T+AD A+ L+ +++ + K ++ YL +P+ E + T DF++ E++ L++P + + R + E A+ G +++A W+V SRS + + ++ EG +VL+P+LD+ NH H++ ++ + A R + G+EV +YG G TS + +YGF+ ++ Sbjct: 96 NIRGLYATRPFKKDEIICKIPSDCALALVDPSVVNDDFTVAD---GAVNFLQWYVNNPQAKQMWSAYLDTLPTR-----EMHFDPTPDFYSDGEIDQLEFPMIVKQAKERKNQIMELAQSSGIPFDELQFATWLVASRSFMIKISVNDPMVKEGALST---TQNTIRVLLPYLDMINHSSDDYNAELHLIDPEKDDAWFAIRAVRPIKKGKEVTISYGASGVETSAGLLMNYGFVADE 322
BLAST of NO29G00330 vs. NCBI_GenBank
Match: XP_005535718.1 (similar to ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase [Cyanidioschyzon merolae strain 10D] >BAM79432.1 similar to ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase [Cyanidioschyzon merolae strain 10D]) HSP 1 Score: 89.7 bits (221), Expect = 2.400e-14 Identity = 77/247 (31.17%), Postives = 108/247 (43.72%), Query Frame = 0 Query: 134 IRGIVALKPFKKGDIIISIPYSLALDVTPPSLPSSSSTLADPIPAALELLRQLDDEEIKARYAPYLAMIPSATTKQGEGGYGLTTDFFTKSELESLQWPPTLVETNNRIQR-----TQEAAKEGG---------------REEGLVRWAVWMVVSRSLGIAPALLGEGEGGRGGGRSGQRQVLIPFLDLCNHDEGSPHVLTGR-EGGMLKVVAGREVGVGEEVAFAYGGGQLTSDRFVQDYGFLEEK 360 +RG+VA + G++I IP LA+ + S +P AL LLR + D E +Y Y ++P Q +TTDF+ EL + PT+ ET R Q+ QE + G E WAV +VVSR+L + G QR LIP LD+ N S H L R ++AG V EE+ YGGG +++DR +QDYGF+ E+ Sbjct: 163 MRGLVATAAIRAGEVICRIPRRLAICL--------GSEGENPGLPALHLLRMMTDGEAVHKYKAYFDVLPRPEMCQ------MTTDFYNDEELGQIAHTPTVEETRRRRQQLRDTFLQEFLRTGADYLHPQVAAQNLDHMPEFQRYLWAVHLVVSRALAVRT------------GDEAQR-YLIPLLDMINCRMDSKHELRYRIATDEFVLIAGESVRRSEEIRIPYGGGFVSNDRLIQDYGFIVER 382
BLAST of NO29G00330 vs. NCBI_GenBank
Match: EJK72844.1 (hypothetical protein THAOC_05584, partial [Thalassiosira oceanica]) HSP 1 Score: 81.6 bits (200), Expect = 6.500e-12 Identity = 67/237 (28.27%), Postives = 120/237 (50.63%), Query Frame = 0 Query: 134 IRGIVALKPFKKGDIIISIPYSLALDVTPPSLPSSSSTLADPI-PAALELLR-QLDDEEIKARYAPYLAMIPSATTKQGEGGYGLTTDFFTKSELESLQWPPTLVETNNRIQRTQEAAKEGGREEGLVRWAVWMVVSRSLGIAPALLGEGEGGRGGGRSGQR---QVLIPFLDLCNHDEGSPH-----VLTGREGGMLKVVAGREVGVGEEVAFAYG-GGQLTSDRFVQDYGFLEEK 360 IRG+ A K F+KGDI+ IP +AL +T PSS++ +AD + A+ ++ +EE K + YL +P+ + + T DF+++ E+++L++P K G +++A W+V SRS I + + +GE R G S + +VL+P+LD+ NH + + + ++ + A R + G+E++ +YG G TS + +YGF+ E+ Sbjct: 97 IRGMYANKSFRKGDIVCKIPSDVALALTD---PSSATDVADGVADGAMNFIQWYASNEEAKQTWKAYLDTLPTK-----DMHFDPTPDFYSEQEIQALEFP---------------KIKSGVVSFDELQFATWLVASRSFAIKIS-VDDGELVREGAVSTREKVIRVLLPYLDMINHSSDNANAELHLIDPEKDDAWFAIRATRPIKKGKEISISYGASGVETSLGLLSNYGFVPEE 309 The following BLAST results are available for this feature:
BLAST of NO29G00330 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO29G00330 ID=NO29G00330|Name=NO29G00330|organism=Nannochloropsis oceanica|type=gene|length=3760bpback to top protein sequence of NO29G00330.1 >NO29G00330.1-protein ID=NO29G00330.1-protein|Name=NO29G00330.1|organism=Nannochloropsis oceanica|type=polypeptide|length=438bpback to top Synonyms
Publications
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