NO29G00320, NO29G00320 (gene) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO29G00320
Unique Name	NO29G00320
Type	gene
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	9223
Alignment location	chr29:129158..138380 -

Link to JBrowse

Properties


Property Name	Value
Description	ATP-dependent RNA helicase DHX8

Mutants

Expression

Analysis:

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr29	genome	chr29:129158..138380 -

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
PRJNA769958	2024-08-13
GSE178672	2023-12-15
PRJNA933693	2023-10-26
PRJNA943449	2023-07-19
GSE149904	2020-10-10
NoIMET1_WT_HS	2020-09-29
GSE139615	2020-03-11
PRJNA241382	2020-03-11
BLASTP analysis of N. oceanica IMET1 genes	2019-07-11
InterPro analysis for N. oceanica IMET1 genes	2019-07-11
PRJNA182180	2019-04-25
Gene prediction for N. oceanica IMET1	2017-10-24

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003676	nucleic acid binding
GO:0004386	helicase activity

Vocabulary: **INTERPRO**
Term	Definition
IPR012340	NA-bd_OB-fold
IPR027417	P-loop_NTPase
IPR011709	DUF1605
IPR003029	Rbsml_prot_S1_RNA-bd_dom
IPR022967	S1_dom
IPR001650	Helicase_C
IPR007502	Helicase-assoc_dom
IPR014001	Helicase_ATP-bd

Homology

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BLAST of NO29G00320 vs. NCBI_GenBank
Match: XP_009517810.1 (hypothetical protein PHYSODRAFT_553525 [Phytophthora sojae] >EGZ30535.1 hypothetical protein PHYSODRAFT_553525 [Phytophthora sojae])

HSP 1 Score: 1362.1 bits (3524), Expect = 0.000e+0
Identity = 676/979 (69.05%), Postives = 802/979 (81.92%), Query Frame = 0

Query:  327 ELELYGIYDGKVTKVMDFGCFVELEGVKGQLREGLVHVGQIQQGMLRDPKAAVGRGQRVKVKVISITGSKLSLSMKEVEQKTGEDLMPQRSAAGIAKAQAELRSNXXXXXXXXXXXXXXXXXXXXXGINRGVDIEAVKQRM--EDERDTRARKRMTSPELWEARQLIASGVMPASEIIGDAEGGNLLDYEETAEELEVELNDEEPAFLAGQTQFSRELSPPRIVKNPDGSLNRAAMTQNQLAKERRELRQAQVSSLIDQIPKDFNKSWIDPVPEAGERHFAQELRSINLGDNMSMPEWKEQAQKKNLSYGFIQKGSLKEQREHLPVFMLKRQFMEGMAQNQVLVVRGETGSGKTTQLTQYLAEMGFSSRGIIGCTQPRRVAASSVAKRVAEEFGCQLGQEVGYTVRFDDCTSPETIIKYMTDGMLLREYLVDGDLSRYSVVMLDEAHERTIHTDVLFGLLKDLLTRRKDFRLIVTSATLEVEKFSGYFFDAPIFSIPGRTHKVTILHANDPEPDYLDACLLTVMQIHLSEPEGDILVFLTGQEEIDTCSEILYGRMKQL--GSLAPELIILPVYGAQPSEMQSRIFEPAPPGARKCVIATNIAEASLTIDGIVYVVDPGFCKQKVFNSRMGMDALVVTPISQASAQQRSGRAGRTMPGKCFRLYTEDAFHNEMLPNSVPEIQRANLGNVVLQLKAMGINDLLGFDFMDPPPVATLISAMQNLYTLGALDEEGLLTRLGRKMAEFPLEPQLSKILITSVELACTDEILTIVAMLSVETPFYRPKDKQAQADMKKAKFFQVEGDHLTLLAVYEGWKNAKFSNPWCFENFLQARAMKRAQDVRKQLVAILDRYKMDILSAGRNFKKIQQAICSGYFTNVAKKDPQEGFKTIVDNNLVYIHPSSALFNKSPEWVLYHELVMTTKEYMRNVMAVDPKWLVELAPKFFKAADPHKLTKAKRMQKIEPLYDRFNPPNSWRLSKRKG 1302
            E+ELYGIYDG+VTKVMDFG FVELEG   + +EGLVHV  +    + + K    RG RVKVK+ISI+G+KLS+SM++V+Q TG DLMPQRS++G  +A+ E +S+                      IN         Q++  +D +  RA KRM+SPE WE +QLI SGV+   +     E   LL+ E T E+ EVELN++EP FL GQTQ SRE+SP +IVKNPDGS+ RAAMTQ+ LAKERRELRQ Q + LID IPKD N+ W DP+PEAGERHFAQELR IN+G    +PEWK+++  KNLSYG +   S+ EQRE LPVF LKRQ M+ +A NQVLVV GETGSGKTTQ+TQY+AEMG +S GIIGCTQPRRVAASSVAKRVAEEFGC+LGQEVGY++RF+D TSPET+IKYMT+GMLLREYL D  LS+YS +MLDEAHERTI+TDVLFGLLKDL+ +RKD ++IVTSATL+ EKFS YFFD PIF+IPGRT  V IL+  +PE DYLDA LL VMQIHLSEPEGDIL+FLTGQEEIDT  E+LY R+K L   +LAPELIILPVYGA PSEMQSRIFEPAP G+RKCV+ATNIAEASLTIDGI YVVDPGFCKQ  FNS++GMD+LVV P SQASA+QR+GRAGRT PGKC+RLYTE+A+ NEMLP +VPEIQRANLG+VVLQLKAMGINDL+GFDFMDPPP   L+ A++NLY LGALD+EGLLTRLG+KMAEFP+EP+ +K+L+TSV L C +E+LTIVAMLSVE+ F+RPK+KQAQAD KKAKF Q EGDHLTLLAVYE W N+KFSNPWC+ENF+QARA++RAQDVRKQL++ILDRYKMD++S G+NF K+++AI +GYF N AKKDPQEG++T+V+   VYIHPSSALFNKSPEWVLYHELV+TTKEYMRN+M ++PKWLVELAP FFK  DP KL+K KR +KIEPLYDRFNPP+SWRLSKR+G
Sbjct:  204 EIELYGIYDGRVTKVMDFGVFVELEGFSREKKEGLVHVSNLSANRVHNVKEFAKRGDRVKVKLISISGAKLSMSMRDVDQTTGRDLMPQRSSSGAERARQENKSSDARSW-----------------INPSAPGMQSSQQLDEDDSKPQRAAKRMSSPERWEVQQLINSGVLSVEDYPTFDEEHGLLNTEATEEDFEVELNEDEPVFLRGQTQMSREMSPVKIVKNPDGSMQRAAMTQSNLAKERRELRQTQANQLIDSIPKDLNRPWEDPMPEAGERHFAQELRGINMGSTFELPEWKQKSVGKNLSYGIVSNKSILEQRESLPVFKLKRQLMKAIADNQVLVVIGETGSGKTTQMTQYMAEMGLTSTGIIGCTQPRRVAASSVAKRVAEEFGCELGQEVGYSMRFEDVTSPETVIKYMTEGMLLREYLADPTLSKYSALMLDEAHERTINTDVLFGLLKDLVRKRKDLKIIVTSATLDAEKFSRYFFDCPIFTIPGRTFPVEILYTKEPELDYLDASLLCVMQIHLSEPEGDILLFLTGQEEIDTACEVLYQRIKALQERALAPELIILPVYGALPSEMQSRIFEPAPKGSRKCVVATNIAEASLTIDGIYYVVDPGFCKQNAFNSKIGMDSLVVVPCSQASARQRAGRAGRTGPGKCYRLYTENAYKNEMLPTTVPEIQRANLGSVVLQLKAMGINDLMGFDFMDPPPQDALVMALENLYALGALDDEGLLTRLGKKMAEFPVEPKNAKVLLTSVVLGCAEEVLTIVAMLSVESVFFRPKEKQAQADQKKAKFHQPEGDHLTLLAVYEAWANSKFSNPWCYENFIQARAIRRAQDVRKQLLSILDRYKMDVVSCGKNFNKVRRAIVAGYFANTAKKDPQEGYRTMVEGQPVYIHPSSALFNKSPEWVLYHELVLTTKEYMRNIMTIEPKWLVELAPAFFKKGDPTKLSKRKRNEKIEPLYDRFNPPDSWRLSKRRG 1165

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BLAST of NO29G00320 vs. NCBI_GenBank
Match: ETI34370.1 (ATP-dependent helicase HrpA [Phytophthora parasitica P1569])

HSP 1 Score: 1357.8 bits (3513), Expect = 0.000e+0
Identity = 675/978 (69.02%), Postives = 801/978 (81.90%), Query Frame = 0

Query:  327 ELELYGIYDGKVTKVMDFGCFVELEGVKGQLREGLVHVGQIQQGMLRDPKAAVGRGQRVKVKVISITGSKLSLSMKEVEQKTGEDLMPQRSAAGIAKAQAELRSNXXXXXXXXXXXXXXXXXXXXXGINRGVDIEAVKQRM--EDERDTRARKRMTSPELWEARQLIASGVMPASEIIGDAEGGNLLDYEETAEELEVELNDEEPAFLAGQTQFSRELSPPRIVKNPDGSLNRAAMTQNQLAKERRELRQAQVSSLIDQIPKDFNKSWIDPVPEAGERHFAQELRSINLGDNMSMPEWKEQAQKKNLSYGFIQKGSLKEQREHLPVFMLKRQFMEGMAQNQVLVVRGETGSGKTTQLTQYLAEMGFSSRGIIGCTQPRRVAASSVAKRVAEEFGCQLGQEVGYTVRFDDCTSPETIIKYMTDGMLLREYLVDGDLSRYSVVMLDEAHERTIHTDVLFGLLKDLLTRRKDFRLIVTSATLEVEKFSGYFFDAPIFSIPGRTHKVTILHANDPEPDYLDACLLTVMQIHLSEPEGDILVFLTGQEEIDTCSEILYGRMKQL--GSLAPELIILPVYGAQPSEMQSRIFEPAPPGARKCVIATNIAEASLTIDGIVYVVDPGFCKQKVFNSRMGMDALVVTPISQASAQQRSGRAGRTMPGKCFRLYTEDAFHNEMLPNSVPEIQRANLGNVVLQLKAMGINDLLGFDFMDPPPVATLISAMQNLYTLGALDEEGLLTRLGRKMAEFPLEPQLSKILITSVELACTDEILTIVAMLSVETPFYRPKDKQAQADMKKAKFFQVEGDHLTLLAVYEGWKNAKFSNPWCFENFLQARAMKRAQDVRKQLVAILDRYKMDILSAGRNFKKIQQAICSGYFTNVAKKDPQEGFKTIVDNNLVYIHPSSALFNKSPEWVLYHELVMTTKEYMRNVMAVDPKWLVELAPKFFKAADPHKLTKAKRMQKIEPLYDRFNPPNSWRLSKRK 1301
            ELELYGIYDG+VTKVMDFG FVELEG   + +EGLVHV  +    + + K    RG RVKVK+ISI+G+KLS+SM++V+QKTG+DLMPQRS+ G  +A+ E +S+                      IN         Q++  +D +  RA KRM+SPE WE +QLI SGV+   +     E   LL+ E T E+ EVELN++EP FL GQT  SRE+SP +IVKNPDGS+ RAAMTQ+ LAKERRELRQ Q + LID IPKD N+ W DP+PEAGERHFAQELR IN+G    +PEWK+++  KNLSYG +   S+ EQRE LPVF LKRQ M+ +A NQVLVV GETGSGKTTQ+TQY+AEMG +S GIIGCTQPRRVAASSVAKRVAEEFGC+LGQEVGY++RF+D TSPET+IKYMT+GMLLREYL D  LS+YS +MLDEAHERTI+TDVLFGLLKDL+ +RKD ++IVTSATL+ EKFS YFFD PIF+IPGRT  V IL+  +PE DYLDA LL VMQIHLSEPEGDIL+FLTGQEEIDT  E+LY R+K L   +LAPELIILPVYGA PSEMQSRIFEPAP G+RKCV+ATNIAEASLTIDGI YVVDPGFCKQ  FNS++GMD+LVV P SQASA+QR+GRAGRT PGKC+RLYTE+A+ NEMLP +VPEIQRANLG+VVLQLKAMGINDL+GFDFMDPPP   L+ A++NLY LGALD+EGLLTRLG+KMAEFP+EP+ +K+L+TSV L C +E+LTIVAMLSVE+ F+RPK+KQAQAD KKAKF Q EGDHLTLLAVYE W N+KFSNPWC+ENF+QARA++RAQDVRKQL++ILDRYKMD++S G+N+ K+++AI +GYF N AKKDPQEG++T+V+   VYIHPSSALFNKSPEWVLYHELV+TTKEYMRN+M ++PKWLVELAP FFK  DP KL+K KR +KIEPLYDRFNPP+SWRLSKR+
Sbjct:  224 ELELYGIYDGRVTKVMDFGVFVELEGFSREKKEGLVHVSNLSANRVSNVKEFAKRGDRVKVKLISISGAKLSMSMRDVDQKTGKDLMPQRSSDGAERARQENKSSDSRSW-----------------INPSAPGMQSSQQLDEDDSKPQRAAKRMSSPERWEVQQLINSGVLSIEDYPTFDEEHGLLNTETTEEDFEVELNEDEPVFLRGQTHMSREMSPVKIVKNPDGSMQRAAMTQSNLAKERRELRQTQANQLIDSIPKDLNRPWEDPMPEAGERHFAQELRGINMGSTFELPEWKQKSVGKNLSYGIVSNKSILEQRESLPVFKLKRQLMKAIADNQVLVVIGETGSGKTTQMTQYMAEMGLTSTGIIGCTQPRRVAASSVAKRVAEEFGCELGQEVGYSMRFEDVTSPETVIKYMTEGMLLREYLADPTLSKYSALMLDEAHERTINTDVLFGLLKDLVRKRKDLKIIVTSATLDAEKFSRYFFDCPIFTIPGRTFPVEILYTKEPELDYLDASLLCVMQIHLSEPEGDILLFLTGQEEIDTACEVLYQRIKALQERALAPELIILPVYGALPSEMQSRIFEPAPKGSRKCVVATNIAEASLTIDGIYYVVDPGFCKQNAFNSKIGMDSLVVVPCSQASARQRAGRAGRTGPGKCYRLYTENAYKNEMLPTTVPEIQRANLGSVVLQLKAMGINDLMGFDFMDPPPQDALVMALENLYALGALDDEGLLTRLGKKMAEFPVEPKNAKVLLTSVVLGCAEEVLTIVAMLSVESVFFRPKEKQAQADQKKAKFHQPEGDHLTLLAVYEAWANSKFSNPWCYENFIQARAIRRAQDVRKQLLSILDRYKMDVVSCGKNYNKVRRAIVAGYFANTAKKDPQEGYRTMVEGQPVYIHPSSALFNKSPEWVLYHELVLTTKEYMRNIMTIEPKWLVELAPAFFKKGDPTKLSKRKRNEKIEPLYDRFNPPDSWRLSKRR 1184

[Close]

BLAST of NO29G00320 vs. NCBI_GenBank
Match: ETK74726.1 (ATP-dependent helicase HrpA [Phytophthora parasitica] >ETP04276.1 ATP-dependent helicase HrpA [Phytophthora parasitica CJ01A1])

HSP 1 Score: 1357.8 bits (3513), Expect = 0.000e+0
Identity = 675/978 (69.02%), Postives = 801/978 (81.90%), Query Frame = 0

Query:  327 ELELYGIYDGKVTKVMDFGCFVELEGVKGQLREGLVHVGQIQQGMLRDPKAAVGRGQRVKVKVISITGSKLSLSMKEVEQKTGEDLMPQRSAAGIAKAQAELRSNXXXXXXXXXXXXXXXXXXXXXGINRGVDIEAVKQRM--EDERDTRARKRMTSPELWEARQLIASGVMPASEIIGDAEGGNLLDYEETAEELEVELNDEEPAFLAGQTQFSRELSPPRIVKNPDGSLNRAAMTQNQLAKERRELRQAQVSSLIDQIPKDFNKSWIDPVPEAGERHFAQELRSINLGDNMSMPEWKEQAQKKNLSYGFIQKGSLKEQREHLPVFMLKRQFMEGMAQNQVLVVRGETGSGKTTQLTQYLAEMGFSSRGIIGCTQPRRVAASSVAKRVAEEFGCQLGQEVGYTVRFDDCTSPETIIKYMTDGMLLREYLVDGDLSRYSVVMLDEAHERTIHTDVLFGLLKDLLTRRKDFRLIVTSATLEVEKFSGYFFDAPIFSIPGRTHKVTILHANDPEPDYLDACLLTVMQIHLSEPEGDILVFLTGQEEIDTCSEILYGRMKQL--GSLAPELIILPVYGAQPSEMQSRIFEPAPPGARKCVIATNIAEASLTIDGIVYVVDPGFCKQKVFNSRMGMDALVVTPISQASAQQRSGRAGRTMPGKCFRLYTEDAFHNEMLPNSVPEIQRANLGNVVLQLKAMGINDLLGFDFMDPPPVATLISAMQNLYTLGALDEEGLLTRLGRKMAEFPLEPQLSKILITSVELACTDEILTIVAMLSVETPFYRPKDKQAQADMKKAKFFQVEGDHLTLLAVYEGWKNAKFSNPWCFENFLQARAMKRAQDVRKQLVAILDRYKMDILSAGRNFKKIQQAICSGYFTNVAKKDPQEGFKTIVDNNLVYIHPSSALFNKSPEWVLYHELVMTTKEYMRNVMAVDPKWLVELAPKFFKAADPHKLTKAKRMQKIEPLYDRFNPPNSWRLSKRK 1301
            ELELYGIYDG+VTKVMDFG FVELEG   + +EGLVHV  +    + + K    RG RVKVK+ISI+G+KLS+SM++V+QKTG+DLMPQRS+ G  +A+ E +S+                      IN         Q++  +D +  RA KRM+SPE WE +QLI SGV+   +     E   LL+ E T E+ EVELN++EP FL GQT  SRE+SP +IVKNPDGS+ RAAMTQ+ LAKERRELRQ Q + LID IPKD N+ W DP+PEAGERHFAQELR IN+G    +PEWK+++  KNLSYG +   S+ EQRE LPVF LKRQ M+ +A NQVLVV GETGSGKTTQ+TQY+AEMG +S GIIGCTQPRRVAASSVAKRVAEEFGC+LGQEVGY++RF+D TSPET+IKYMT+GMLLREYL D  LS+YS +MLDEAHERTI+TDVLFGLLKDL+ +RKD ++IVTSATL+ EKFS YFFD PIF+IPGRT  V IL+  +PE DYLDA LL VMQIHLSEPEGDIL+FLTGQEEIDT  E+LY R+K L   +LAPELIILPVYGA PSEMQSRIFEPAP G+RKCV+ATNIAEASLTIDGI YVVDPGFCKQ  FNS++GMD+LVV P SQASA+QR+GRAGRT PGKC+RLYTE+A+ NEMLP +VPEIQRANLG+VVLQLKAMGINDL+GFDFMDPPP   L+ A++NLY LGALD+EGLLTRLG+KMAEFP+EP+ +K+L+TSV L C +E+LTIVAMLSVE+ F+RPK+KQAQAD KKAKF Q EGDHLTLLAVYE W N+KFSNPWC+ENF+QARA++RAQDVRKQL++ILDRYKMD++S G+N+ K+++AI +GYF N AKKDPQEG++T+V+   VYIHPSSALFNKSPEWVLYHELV+TTKEYMRN+M ++PKWLVELAP FFK  DP KL+K KR +KIEPLYDRFNPP+SWRLSKR+
Sbjct:  224 ELELYGIYDGRVTKVMDFGVFVELEGFSREKKEGLVHVSNLSANRVSNVKEFAKRGDRVKVKLISISGAKLSMSMRDVDQKTGKDLMPQRSSDGAERARQENKSSDSRSW-----------------INPSAPGMQSSQQLDEDDSKPQRAAKRMSSPERWEVQQLINSGVLSIEDYPTFDEEHGLLNTETTEEDFEVELNEDEPVFLRGQTHMSREMSPVKIVKNPDGSMQRAAMTQSNLAKERRELRQTQANQLIDSIPKDLNRPWEDPMPEAGERHFAQELRGINMGSTFELPEWKQKSVGKNLSYGIVSNKSILEQRESLPVFKLKRQLMKAIADNQVLVVIGETGSGKTTQMTQYMAEMGLTSTGIIGCTQPRRVAASSVAKRVAEEFGCELGQEVGYSMRFEDVTSPETVIKYMTEGMLLREYLADPTLSKYSALMLDEAHERTINTDVLFGLLKDLVRKRKDLKIIVTSATLDAEKFSRYFFDCPIFTIPGRTFPVEILYTKEPELDYLDASLLCVMQIHLSEPEGDILLFLTGQEEIDTACEVLYQRIKALQERALAPELIILPVYGALPSEMQSRIFEPAPKGSRKCVVATNIAEASLTIDGIYYVVDPGFCKQNAFNSKIGMDSLVVVPCSQASARQRAGRAGRTGPGKCYRLYTENAYKNEMLPTTVPEIQRANLGSVVLQLKAMGINDLMGFDFMDPPPQDALVMALENLYALGALDDEGLLTRLGKKMAEFPVEPKNAKVLLTSVVLGCAEEVLTIVAMLSVESVFFRPKEKQAQADQKKAKFHQPEGDHLTLLAVYEAWANSKFSNPWCYENFIQARAIRRAQDVRKQLLSILDRYKMDVVSCGKNYNKVRRAIVAGYFANTAKKDPQEGYRTMVEGQPVYIHPSSALFNKSPEWVLYHELVLTTKEYMRNIMTIEPKWLVELAPAFFKKGDPTKLSKRKRNEKIEPLYDRFNPPDSWRLSKRR 1184

[Close]

BLAST of NO29G00320 vs. NCBI_GenBank
Match: ETL28161.1 (ATP-dependent helicase HrpA [Phytophthora parasitica] >ETL81400.1 ATP-dependent helicase HrpA [Phytophthora parasitica])

HSP 1 Score: 1357.8 bits (3513), Expect = 0.000e+0
Identity = 675/978 (69.02%), Postives = 801/978 (81.90%), Query Frame = 0

Query:  327 ELELYGIYDGKVTKVMDFGCFVELEGVKGQLREGLVHVGQIQQGMLRDPKAAVGRGQRVKVKVISITGSKLSLSMKEVEQKTGEDLMPQRSAAGIAKAQAELRSNXXXXXXXXXXXXXXXXXXXXXGINRGVDIEAVKQRM--EDERDTRARKRMTSPELWEARQLIASGVMPASEIIGDAEGGNLLDYEETAEELEVELNDEEPAFLAGQTQFSRELSPPRIVKNPDGSLNRAAMTQNQLAKERRELRQAQVSSLIDQIPKDFNKSWIDPVPEAGERHFAQELRSINLGDNMSMPEWKEQAQKKNLSYGFIQKGSLKEQREHLPVFMLKRQFMEGMAQNQVLVVRGETGSGKTTQLTQYLAEMGFSSRGIIGCTQPRRVAASSVAKRVAEEFGCQLGQEVGYTVRFDDCTSPETIIKYMTDGMLLREYLVDGDLSRYSVVMLDEAHERTIHTDVLFGLLKDLLTRRKDFRLIVTSATLEVEKFSGYFFDAPIFSIPGRTHKVTILHANDPEPDYLDACLLTVMQIHLSEPEGDILVFLTGQEEIDTCSEILYGRMKQL--GSLAPELIILPVYGAQPSEMQSRIFEPAPPGARKCVIATNIAEASLTIDGIVYVVDPGFCKQKVFNSRMGMDALVVTPISQASAQQRSGRAGRTMPGKCFRLYTEDAFHNEMLPNSVPEIQRANLGNVVLQLKAMGINDLLGFDFMDPPPVATLISAMQNLYTLGALDEEGLLTRLGRKMAEFPLEPQLSKILITSVELACTDEILTIVAMLSVETPFYRPKDKQAQADMKKAKFFQVEGDHLTLLAVYEGWKNAKFSNPWCFENFLQARAMKRAQDVRKQLVAILDRYKMDILSAGRNFKKIQQAICSGYFTNVAKKDPQEGFKTIVDNNLVYIHPSSALFNKSPEWVLYHELVMTTKEYMRNVMAVDPKWLVELAPKFFKAADPHKLTKAKRMQKIEPLYDRFNPPNSWRLSKRK 1301
            ELELYGIYDG+VTKVMDFG FVELEG   + +EGLVHV  +    + + K    RG RVKVK+ISI+G+KLS+SM++V+QKTG+DLMPQRS+ G  +A+ E +S+                      IN         Q++  +D +  RA KRM+SPE WE +QLI SGV+   +     E   LL+ E T E+ EVELN++EP FL GQT  SRE+SP +IVKNPDGS+ RAAMTQ+ LAKERRELRQ Q + LID IPKD N+ W DP+PEAGERHFAQELR IN+G    +PEWK+++  KNLSYG +   S+ EQRE LPVF LKRQ M+ +A NQVLVV GETGSGKTTQ+TQY+AEMG +S GIIGCTQPRRVAASSVAKRVAEEFGC+LGQEVGY++RF+D TSPET+IKYMT+GMLLREYL D  LS+YS +MLDEAHERTI+TDVLFGLLKDL+ +RKD ++IVTSATL+ EKFS YFFD PIF+IPGRT  V IL+  +PE DYLDA LL VMQIHLSEPEGDIL+FLTGQEEIDT  E+LY R+K L   +LAPELIILPVYGA PSEMQSRIFEPAP G+RKCV+ATNIAEASLTIDGI YVVDPGFCKQ  FNS++GMD+LVV P SQASA+QR+GRAGRT PGKC+RLYTE+A+ NEMLP +VPEIQRANLG+VVLQLKAMGINDL+GFDFMDPPP   L+ A++NLY LGALD+EGLLTRLG+KMAEFP+EP+ +K+L+TSV L C +E+LTIVAMLSVE+ F+RPK+KQAQAD KKAKF Q EGDHLTLLAVYE W N+KFSNPWC+ENF+QARA++RAQDVRKQL++ILDRYKMD++S G+N+ K+++AI +GYF N AKKDPQEG++T+V+   VYIHPSSALFNKSPEWVLYHELV+TTKEYMRN+M ++PKWLVELAP FFK  DP KL+K KR +KIEPLYDRFNPP+SWRLSKR+
Sbjct:  224 ELELYGIYDGRVTKVMDFGVFVELEGFSREKKEGLVHVSNLSANRVSNVKEFAKRGDRVKVKLISISGAKLSMSMRDVDQKTGKDLMPQRSSDGAERARQENKSSDSRSW-----------------INPSAPGMQSSQQLDEDDSKPQRAAKRMSSPERWEVQQLINSGVLSIEDYPTFDEEHGLLNTETTEEDFEVELNEDEPVFLRGQTHMSREMSPVKIVKNPDGSMQRAAMTQSNLAKERRELRQTQANQLIDSIPKDLNRPWEDPMPEAGERHFAQELRGINMGSTFELPEWKQKSVGKNLSYGIVSNKSILEQRESLPVFKLKRQLMKAIADNQVLVVIGETGSGKTTQMTQYMAEMGLTSTGIIGCTQPRRVAASSVAKRVAEEFGCELGQEVGYSMRFEDVTSPETVIKYMTEGMLLREYLADPTLSKYSALMLDEAHERTINTDVLFGLLKDLVRKRKDLKIIVTSATLDAEKFSRYFFDCPIFTIPGRTFPVEILYTKEPELDYLDASLLCVMQIHLSEPEGDILLFLTGQEEIDTACEVLYQRIKALQERALAPELIILPVYGALPSEMQSRIFEPAPKGSRKCVVATNIAEASLTIDGIYYVVDPGFCKQNAFNSKIGMDSLVVVPCSQASARQRAGRAGRTGPGKCYRLYTENAYKNEMLPTTVPEIQRANLGSVVLQLKAMGINDLMGFDFMDPPPQDALVMALENLYALGALDDEGLLTRLGKKMAEFPVEPKNAKVLLTSVVLGCAEEVLTIVAMLSVESVFFRPKEKQAQADQKKAKFHQPEGDHLTLLAVYEAWANSKFSNPWCYENFIQARAIRRAQDVRKQLLSILDRYKMDVVSCGKNYNKVRRAIVAGYFANTAKKDPQEGYRTMVEGQPVYIHPSSALFNKSPEWVLYHELVLTTKEYMRNIMTIEPKWLVELAPAFFKKGDPTKLSKRKRNEKIEPLYDRFNPPDSWRLSKRR 1184

[Close]

BLAST of NO29G00320 vs. NCBI_GenBank
Match: ETM34605.1 (ATP-dependent helicase HrpA [Phytophthora parasitica])

HSP 1 Score: 1357.8 bits (3513), Expect = 0.000e+0
Identity = 675/978 (69.02%), Postives = 801/978 (81.90%), Query Frame = 0

Query:  327 ELELYGIYDGKVTKVMDFGCFVELEGVKGQLREGLVHVGQIQQGMLRDPKAAVGRGQRVKVKVISITGSKLSLSMKEVEQKTGEDLMPQRSAAGIAKAQAELRSNXXXXXXXXXXXXXXXXXXXXXGINRGVDIEAVKQRM--EDERDTRARKRMTSPELWEARQLIASGVMPASEIIGDAEGGNLLDYEETAEELEVELNDEEPAFLAGQTQFSRELSPPRIVKNPDGSLNRAAMTQNQLAKERRELRQAQVSSLIDQIPKDFNKSWIDPVPEAGERHFAQELRSINLGDNMSMPEWKEQAQKKNLSYGFIQKGSLKEQREHLPVFMLKRQFMEGMAQNQVLVVRGETGSGKTTQLTQYLAEMGFSSRGIIGCTQPRRVAASSVAKRVAEEFGCQLGQEVGYTVRFDDCTSPETIIKYMTDGMLLREYLVDGDLSRYSVVMLDEAHERTIHTDVLFGLLKDLLTRRKDFRLIVTSATLEVEKFSGYFFDAPIFSIPGRTHKVTILHANDPEPDYLDACLLTVMQIHLSEPEGDILVFLTGQEEIDTCSEILYGRMKQL--GSLAPELIILPVYGAQPSEMQSRIFEPAPPGARKCVIATNIAEASLTIDGIVYVVDPGFCKQKVFNSRMGMDALVVTPISQASAQQRSGRAGRTMPGKCFRLYTEDAFHNEMLPNSVPEIQRANLGNVVLQLKAMGINDLLGFDFMDPPPVATLISAMQNLYTLGALDEEGLLTRLGRKMAEFPLEPQLSKILITSVELACTDEILTIVAMLSVETPFYRPKDKQAQADMKKAKFFQVEGDHLTLLAVYEGWKNAKFSNPWCFENFLQARAMKRAQDVRKQLVAILDRYKMDILSAGRNFKKIQQAICSGYFTNVAKKDPQEGFKTIVDNNLVYIHPSSALFNKSPEWVLYHELVMTTKEYMRNVMAVDPKWLVELAPKFFKAADPHKLTKAKRMQKIEPLYDRFNPPNSWRLSKRK 1301
            ELELYGIYDG+VTKVMDFG FVELEG   + +EGLVHV  +    + + K    RG RVKVK+ISI+G+KLS+SM++V+QKTG+DLMPQRS+ G  +A+ E +S+                      IN         Q++  +D +  RA KRM+SPE WE +QLI SGV+   +     E   LL+ E T E+ EVELN++EP FL GQT  SRE+SP +IVKNPDGS+ RAAMTQ+ LAKERRELRQ Q + LID IPKD N+ W DP+PEAGERHFAQELR IN+G    +PEWK+++  KNLSYG +   S+ EQRE LPVF LKRQ M+ +A NQVLVV GETGSGKTTQ+TQY+AEMG +S GIIGCTQPRRVAASSVAKRVAEEFGC+LGQEVGY++RF+D TSPET+IKYMT+GMLLREYL D  LS+YS +MLDEAHERTI+TDVLFGLLKDL+ +RKD ++IVTSATL+ EKFS YFFD PIF+IPGRT  V IL+  +PE DYLDA LL VMQIHLSEPEGDIL+FLTGQEEIDT  E+LY R+K L   +LAPELIILPVYGA PSEMQSRIFEPAP G+RKCV+ATNIAEASLTIDGI YVVDPGFCKQ  FNS++GMD+LVV P SQASA+QR+GRAGRT PGKC+RLYTE+A+ NEMLP +VPEIQRANLG+VVLQLKAMGINDL+GFDFMDPPP   L+ A++NLY LGALD+EGLLTRLG+KMAEFP+EP+ +K+L+TSV L C +E+LTIVAMLSVE+ F+RPK+KQAQAD KKAKF Q EGDHLTLLAVYE W N+KFSNPWC+ENF+QARA++RAQDVRKQL++ILDRYKMD++S G+N+ K+++AI +GYF N AKKDPQEG++T+V+   VYIHPSSALFNKSPEWVLYHELV+TTKEYMRN+M ++PKWLVELAP FFK  DP KL+K KR +KIEPLYDRFNPP+SWRLSKR+
Sbjct:  224 ELELYGIYDGRVTKVMDFGVFVELEGFSREKKEGLVHVSNLSANRVSNVKEFAKRGDRVKVKLISISGAKLSMSMRDVDQKTGKDLMPQRSSDGAERARQENKSSDSRSW-----------------INPSAPGMQSSQQLDEDDSKPQRAAKRMSSPERWEVQQLINSGVLSIEDYPTFDEEHGLLNTETTEEDFEVELNEDEPVFLRGQTHMSREMSPVKIVKNPDGSMQRAAMTQSNLAKERRELRQTQANQLIDSIPKDLNRPWEDPMPEAGERHFAQELRGINMGSTFELPEWKQKSVGKNLSYGIVSNKSILEQRESLPVFKLKRQLMKAIADNQVLVVIGETGSGKTTQMTQYMAEMGLTSTGIIGCTQPRRVAASSVAKRVAEEFGCELGQEVGYSMRFEDVTSPETVIKYMTEGMLLREYLADPTLSKYSALMLDEAHERTINTDVLFGLLKDLVRKRKDLKIIVTSATLDAEKFSRYFFDCPIFTIPGRTFPVEILYTKEPELDYLDASLLCVMQIHLSEPEGDILLFLTGQEEIDTACEVLYQRIKALQERALAPELIILPVYGALPSEMQSRIFEPAPKGSRKCVVATNIAEASLTIDGIYYVVDPGFCKQNAFNSKIGMDSLVVVPCSQASARQRAGRAGRTGPGKCYRLYTENAYKNEMLPTTVPEIQRANLGSVVLQLKAMGINDLMGFDFMDPPPQDALVMALENLYALGALDDEGLLTRLGKKMAEFPVEPKNAKVLLTSVVLGCAEEVLTIVAMLSVESVFFRPKEKQAQADQKKAKFHQPEGDHLTLLAVYEAWANSKFSNPWCYENFIQARAIRRAQDVRKQLLSILDRYKMDVVSCGKNYNKVRRAIVAGYFANTAKKDPQEGYRTMVEGQPVYIHPSSALFNKSPEWVLYHELVLTTKEYMRNIMTIEPKWLVELAPAFFKKGDPTKLSKRKRNEKIEPLYDRFNPPDSWRLSKRR 1184

[Close]

BLAST of NO29G00320 vs. NCBI_GenBank
Match: XP_008896971.1 (ATP-dependent helicase HrpA [Phytophthora parasitica INRA-310] >ETN17405.1 ATP-dependent helicase HrpA [Phytophthora parasitica INRA-310])

HSP 1 Score: 1357.8 bits (3513), Expect = 0.000e+0
Identity = 675/978 (69.02%), Postives = 801/978 (81.90%), Query Frame = 0

Query:  327 ELELYGIYDGKVTKVMDFGCFVELEGVKGQLREGLVHVGQIQQGMLRDPKAAVGRGQRVKVKVISITGSKLSLSMKEVEQKTGEDLMPQRSAAGIAKAQAELRSNXXXXXXXXXXXXXXXXXXXXXGINRGVDIEAVKQRM--EDERDTRARKRMTSPELWEARQLIASGVMPASEIIGDAEGGNLLDYEETAEELEVELNDEEPAFLAGQTQFSRELSPPRIVKNPDGSLNRAAMTQNQLAKERRELRQAQVSSLIDQIPKDFNKSWIDPVPEAGERHFAQELRSINLGDNMSMPEWKEQAQKKNLSYGFIQKGSLKEQREHLPVFMLKRQFMEGMAQNQVLVVRGETGSGKTTQLTQYLAEMGFSSRGIIGCTQPRRVAASSVAKRVAEEFGCQLGQEVGYTVRFDDCTSPETIIKYMTDGMLLREYLVDGDLSRYSVVMLDEAHERTIHTDVLFGLLKDLLTRRKDFRLIVTSATLEVEKFSGYFFDAPIFSIPGRTHKVTILHANDPEPDYLDACLLTVMQIHLSEPEGDILVFLTGQEEIDTCSEILYGRMKQL--GSLAPELIILPVYGAQPSEMQSRIFEPAPPGARKCVIATNIAEASLTIDGIVYVVDPGFCKQKVFNSRMGMDALVVTPISQASAQQRSGRAGRTMPGKCFRLYTEDAFHNEMLPNSVPEIQRANLGNVVLQLKAMGINDLLGFDFMDPPPVATLISAMQNLYTLGALDEEGLLTRLGRKMAEFPLEPQLSKILITSVELACTDEILTIVAMLSVETPFYRPKDKQAQADMKKAKFFQVEGDHLTLLAVYEGWKNAKFSNPWCFENFLQARAMKRAQDVRKQLVAILDRYKMDILSAGRNFKKIQQAICSGYFTNVAKKDPQEGFKTIVDNNLVYIHPSSALFNKSPEWVLYHELVMTTKEYMRNVMAVDPKWLVELAPKFFKAADPHKLTKAKRMQKIEPLYDRFNPPNSWRLSKRK 1301
            ELELYGIYDG+VTKVMDFG FVELEG   + +EGLVHV  +    + + K    RG RVKVK+ISI+G+KLS+SM++V+QKTG+DLMPQRS+ G  +A+ E +S+                      IN         Q++  +D +  RA KRM+SPE WE +QLI SGV+   +     E   LL+ E T E+ EVELN++EP FL GQT  SRE+SP +IVKNPDGS+ RAAMTQ+ LAKERRELRQ Q + LID IPKD N+ W DP+PEAGERHFAQELR IN+G    +PEWK+++  KNLSYG +   S+ EQRE LPVF LKRQ M+ +A NQVLVV GETGSGKTTQ+TQY+AEMG +S GIIGCTQPRRVAASSVAKRVAEEFGC+LGQEVGY++RF+D TSPET+IKYMT+GMLLREYL D  LS+YS +MLDEAHERTI+TDVLFGLLKDL+ +RKD ++IVTSATL+ EKFS YFFD PIF+IPGRT  V IL+  +PE DYLDA LL VMQIHLSEPEGDIL+FLTGQEEIDT  E+LY R+K L   +LAPELIILPVYGA PSEMQSRIFEPAP G+RKCV+ATNIAEASLTIDGI YVVDPGFCKQ  FNS++GMD+LVV P SQASA+QR+GRAGRT PGKC+RLYTE+A+ NEMLP +VPEIQRANLG+VVLQLKAMGINDL+GFDFMDPPP   L+ A++NLY LGALD+EGLLTRLG+KMAEFP+EP+ +K+L+TSV L C +E+LTIVAMLSVE+ F+RPK+KQAQAD KKAKF Q EGDHLTLLAVYE W N+KFSNPWC+ENF+QARA++RAQDVRKQL++ILDRYKMD++S G+N+ K+++AI +GYF N AKKDPQEG++T+V+   VYIHPSSALFNKSPEWVLYHELV+TTKEYMRN+M ++PKWLVELAP FFK  DP KL+K KR +KIEPLYDRFNPP+SWRLSKR+
Sbjct:  224 ELELYGIYDGRVTKVMDFGVFVELEGFSREKKEGLVHVSNLSANRVSNVKEFAKRGDRVKVKLISISGAKLSMSMRDVDQKTGKDLMPQRSSDGAERARQENKSSDSRSW-----------------INPSAPGMQSSQQLDEDDSKPQRAAKRMSSPERWEVQQLINSGVLSIEDYPTFDEEHGLLNTEATEEDFEVELNEDEPVFLRGQTHMSREMSPVKIVKNPDGSMQRAAMTQSNLAKERRELRQTQANQLIDSIPKDLNRPWEDPMPEAGERHFAQELRGINMGSTFELPEWKQKSVGKNLSYGIVSNKSILEQRESLPVFKLKRQLMKAIADNQVLVVIGETGSGKTTQMTQYMAEMGLTSTGIIGCTQPRRVAASSVAKRVAEEFGCELGQEVGYSMRFEDVTSPETVIKYMTEGMLLREYLADPTLSKYSALMLDEAHERTINTDVLFGLLKDLVRKRKDLKIIVTSATLDAEKFSRYFFDCPIFTIPGRTFPVEILYTKEPELDYLDASLLCVMQIHLSEPEGDILLFLTGQEEIDTACEVLYQRIKALQERALAPELIILPVYGALPSEMQSRIFEPAPKGSRKCVVATNIAEASLTIDGIYYVVDPGFCKQNAFNSKIGMDSLVVVPCSQASARQRAGRAGRTGPGKCYRLYTENAYKNEMLPTTVPEIQRANLGSVVLQLKAMGINDLMGFDFMDPPPQDALVMALENLYALGALDDEGLLTRLGKKMAEFPVEPKNAKVLLTSVVLGCAEEVLTIVAMLSVESVFFRPKEKQAQADQKKAKFHQPEGDHLTLLAVYEAWANSKFSNPWCYENFIQARAIRRAQDVRKQLLSILDRYKMDVVSCGKNYNKVRRAIVAGYFANTAKKDPQEGYRTMVEGQPVYIHPSSALFNKSPEWVLYHELVLTTKEYMRNIMTIEPKWLVELAPAFFKKGDPTKLSKRKRNEKIEPLYDRFNPPDSWRLSKRR 1184

[Close]

BLAST of NO29G00320 vs. NCBI_GenBank
Match: ETO63238.1 (ATP-dependent helicase HrpA [Phytophthora parasitica P1976])

HSP 1 Score: 1357.8 bits (3513), Expect = 0.000e+0
Identity = 675/978 (69.02%), Postives = 801/978 (81.90%), Query Frame = 0

Query:  327 ELELYGIYDGKVTKVMDFGCFVELEGVKGQLREGLVHVGQIQQGMLRDPKAAVGRGQRVKVKVISITGSKLSLSMKEVEQKTGEDLMPQRSAAGIAKAQAELRSNXXXXXXXXXXXXXXXXXXXXXGINRGVDIEAVKQRM--EDERDTRARKRMTSPELWEARQLIASGVMPASEIIGDAEGGNLLDYEETAEELEVELNDEEPAFLAGQTQFSRELSPPRIVKNPDGSLNRAAMTQNQLAKERRELRQAQVSSLIDQIPKDFNKSWIDPVPEAGERHFAQELRSINLGDNMSMPEWKEQAQKKNLSYGFIQKGSLKEQREHLPVFMLKRQFMEGMAQNQVLVVRGETGSGKTTQLTQYLAEMGFSSRGIIGCTQPRRVAASSVAKRVAEEFGCQLGQEVGYTVRFDDCTSPETIIKYMTDGMLLREYLVDGDLSRYSVVMLDEAHERTIHTDVLFGLLKDLLTRRKDFRLIVTSATLEVEKFSGYFFDAPIFSIPGRTHKVTILHANDPEPDYLDACLLTVMQIHLSEPEGDILVFLTGQEEIDTCSEILYGRMKQL--GSLAPELIILPVYGAQPSEMQSRIFEPAPPGARKCVIATNIAEASLTIDGIVYVVDPGFCKQKVFNSRMGMDALVVTPISQASAQQRSGRAGRTMPGKCFRLYTEDAFHNEMLPNSVPEIQRANLGNVVLQLKAMGINDLLGFDFMDPPPVATLISAMQNLYTLGALDEEGLLTRLGRKMAEFPLEPQLSKILITSVELACTDEILTIVAMLSVETPFYRPKDKQAQADMKKAKFFQVEGDHLTLLAVYEGWKNAKFSNPWCFENFLQARAMKRAQDVRKQLVAILDRYKMDILSAGRNFKKIQQAICSGYFTNVAKKDPQEGFKTIVDNNLVYIHPSSALFNKSPEWVLYHELVMTTKEYMRNVMAVDPKWLVELAPKFFKAADPHKLTKAKRMQKIEPLYDRFNPPNSWRLSKRK 1301
            ELELYGIYDG+VTKVMDFG FVELEG   + +EGLVHV  +    + + K    RG RVKVK+ISI+G+KLS+SM++V+QKTG+DLMPQRS+ G  +A+ E +S+                      IN         Q++  +D +  RA KRM+SPE WE +QLI SGV+   +     E   LL+ E T E+ EVELN++EP FL GQT  SRE+SP +IVKNPDGS+ RAAMTQ+ LAKERRELRQ Q + LID IPKD N+ W DP+PEAGERHFAQELR IN+G    +PEWK+++  KNLSYG +   S+ EQRE LPVF LKRQ M+ +A NQVLVV GETGSGKTTQ+TQY+AEMG +S GIIGCTQPRRVAASSVAKRVAEEFGC+LGQEVGY++RF+D TSPET+IKYMT+GMLLREYL D  LS+YS +MLDEAHERTI+TDVLFGLLKDL+ +RKD ++IVTSATL+ EKFS YFFD PIF+IPGRT  V IL+  +PE DYLDA LL VMQIHLSEPEGDIL+FLTGQEEIDT  E+LY R+K L   +LAPELIILPVYGA PSEMQSRIFEPAP G+RKCV+ATNIAEASLTIDGI YVVDPGFCKQ  FNS++GMD+LVV P SQASA+QR+GRAGRT PGKC+RLYTE+A+ NEMLP +VPEIQRANLG+VVLQLKAMGINDL+GFDFMDPPP   L+ A++NLY LGALD+EGLLTRLG+KMAEFP+EP+ +K+L+TSV L C +E+LTIVAMLSVE+ F+RPK+KQAQAD KKAKF Q EGDHLTLLAVYE W N+KFSNPWC+ENF+QARA++RAQDVRKQL++ILDRYKMD++S G+N+ K+++AI +GYF N AKKDPQEG++T+V+   VYIHPSSALFNKSPEWVLYHELV+TTKEYMRN+M ++PKWLVELAP FFK  DP KL+K KR +KIEPLYDRFNPP+SWRLSKR+
Sbjct:  224 ELELYGIYDGRVTKVMDFGVFVELEGFSREKKEGLVHVSNLSANRVSNVKEFAKRGDRVKVKLISISGAKLSMSMRDVDQKTGKDLMPQRSSDGAERARQENKSSDSRSW-----------------INPSAPGMQSSQQLDEDDSKPQRAAKRMSSPERWEVQQLINSGVLSIEDYPTFDEEHGLLNTETTEEDFEVELNEDEPVFLRGQTHMSREMSPVKIVKNPDGSMQRAAMTQSNLAKERRELRQTQANQLIDSIPKDLNRPWEDPMPEAGERHFAQELRGINMGSTFELPEWKQKSVGKNLSYGIVSNKSILEQRESLPVFKLKRQLMKAIADNQVLVVIGETGSGKTTQMTQYMAEMGLTSTGIIGCTQPRRVAASSVAKRVAEEFGCELGQEVGYSMRFEDVTSPETVIKYMTEGMLLREYLADPTLSKYSALMLDEAHERTINTDVLFGLLKDLVRKRKDLKIIVTSATLDAEKFSRYFFDCPIFTIPGRTFPVEILYTKEPELDYLDASLLCVMQIHLSEPEGDILLFLTGQEEIDTACEVLYQRIKALQERALAPELIILPVYGALPSEMQSRIFEPAPKGSRKCVVATNIAEASLTIDGIYYVVDPGFCKQNAFNSKIGMDSLVVVPCSQASARQRAGRAGRTGPGKCYRLYTENAYKNEMLPTTVPEIQRANLGSVVLQLKAMGINDLMGFDFMDPPPQDALVMALENLYALGALDDEGLLTRLGKKMAEFPVEPKNAKVLLTSVVLGCAEEVLTIVAMLSVESVFFRPKEKQAQADQKKAKFHQPEGDHLTLLAVYEAWANSKFSNPWCYENFIQARAIRRAQDVRKQLLSILDRYKMDVVSCGKNYNKVRRAIVAGYFANTAKKDPQEGYRTMVEGQPVYIHPSSALFNKSPEWVLYHELVLTTKEYMRNIMTIEPKWLVELAPAFFKKGDPTKLSKRKRNEKIEPLYDRFNPPDSWRLSKRR 1184

[Close]

BLAST of NO29G00320 vs. NCBI_GenBank
Match: ETP32400.1 (ATP-dependent helicase HrpA [Phytophthora parasitica P10297])

HSP 1 Score: 1357.8 bits (3513), Expect = 0.000e+0
Identity = 675/978 (69.02%), Postives = 801/978 (81.90%), Query Frame = 0

Query:  327 ELELYGIYDGKVTKVMDFGCFVELEGVKGQLREGLVHVGQIQQGMLRDPKAAVGRGQRVKVKVISITGSKLSLSMKEVEQKTGEDLMPQRSAAGIAKAQAELRSNXXXXXXXXXXXXXXXXXXXXXGINRGVDIEAVKQRM--EDERDTRARKRMTSPELWEARQLIASGVMPASEIIGDAEGGNLLDYEETAEELEVELNDEEPAFLAGQTQFSRELSPPRIVKNPDGSLNRAAMTQNQLAKERRELRQAQVSSLIDQIPKDFNKSWIDPVPEAGERHFAQELRSINLGDNMSMPEWKEQAQKKNLSYGFIQKGSLKEQREHLPVFMLKRQFMEGMAQNQVLVVRGETGSGKTTQLTQYLAEMGFSSRGIIGCTQPRRVAASSVAKRVAEEFGCQLGQEVGYTVRFDDCTSPETIIKYMTDGMLLREYLVDGDLSRYSVVMLDEAHERTIHTDVLFGLLKDLLTRRKDFRLIVTSATLEVEKFSGYFFDAPIFSIPGRTHKVTILHANDPEPDYLDACLLTVMQIHLSEPEGDILVFLTGQEEIDTCSEILYGRMKQL--GSLAPELIILPVYGAQPSEMQSRIFEPAPPGARKCVIATNIAEASLTIDGIVYVVDPGFCKQKVFNSRMGMDALVVTPISQASAQQRSGRAGRTMPGKCFRLYTEDAFHNEMLPNSVPEIQRANLGNVVLQLKAMGINDLLGFDFMDPPPVATLISAMQNLYTLGALDEEGLLTRLGRKMAEFPLEPQLSKILITSVELACTDEILTIVAMLSVETPFYRPKDKQAQADMKKAKFFQVEGDHLTLLAVYEGWKNAKFSNPWCFENFLQARAMKRAQDVRKQLVAILDRYKMDILSAGRNFKKIQQAICSGYFTNVAKKDPQEGFKTIVDNNLVYIHPSSALFNKSPEWVLYHELVMTTKEYMRNVMAVDPKWLVELAPKFFKAADPHKLTKAKRMQKIEPLYDRFNPPNSWRLSKRK 1301
            ELELYGIYDG+VTKVMDFG FVELEG   + +EGLVHV  +    + + K    RG RVKVK+ISI+G+KLS+SM++V+QKTG+DLMPQRS+ G  +A+ E +S+                      IN         Q++  +D +  RA KRM+SPE WE +QLI SGV+   +     E   LL+ E T E+ EVELN++EP FL GQT  SRE+SP +IVKNPDGS+ RAAMTQ+ LAKERRELRQ Q + LID IPKD N+ W DP+PEAGERHFAQELR IN+G    +PEWK+++  KNLSYG +   S+ EQRE LPVF LKRQ M+ +A NQVLVV GETGSGKTTQ+TQY+AEMG +S GIIGCTQPRRVAASSVAKRVAEEFGC+LGQEVGY++RF+D TSPET+IKYMT+GMLLREYL D  LS+YS +MLDEAHERTI+TDVLFGLLKDL+ +RKD ++IVTSATL+ EKFS YFFD PIF+IPGRT  V IL+  +PE DYLDA LL VMQIHLSEPEGDIL+FLTGQEEIDT  E+LY R+K L   +LAPELIILPVYGA PSEMQSRIFEPAP G+RKCV+ATNIAEASLTIDGI YVVDPGFCKQ  FNS++GMD+LVV P SQASA+QR+GRAGRT PGKC+RLYTE+A+ NEMLP +VPEIQRANLG+VVLQLKAMGINDL+GFDFMDPPP   L+ A++NLY LGALD+EGLLTRLG+KMAEFP+EP+ +K+L+TSV L C +E+LTIVAMLSVE+ F+RPK+KQAQAD KKAKF Q EGDHLTLLAVYE W N+KFSNPWC+ENF+QARA++RAQDVRKQL++ILDRYKMD++S G+N+ K+++AI +GYF N AKKDPQEG++T+V+   VYIHPSSALFNKSPEWVLYHELV+TTKEYMRN+M ++PKWLVELAP FFK  DP KL+K KR +KIEPLYDRFNPP+SWRLSKR+
Sbjct:  222 ELELYGIYDGRVTKVMDFGVFVELEGFSREKKEGLVHVSNLSANRVSNVKEFAKRGDRVKVKLISISGAKLSMSMRDVDQKTGKDLMPQRSSDGAERARQENKSSDSRSW-----------------INPSAPGMQSSQQLDEDDSKPQRAAKRMSSPERWEVQQLINSGVLSIEDYPTFDEEHGLLNTETTEEDFEVELNEDEPVFLRGQTHMSREMSPVKIVKNPDGSMQRAAMTQSNLAKERRELRQTQANQLIDSIPKDLNRPWEDPMPEAGERHFAQELRGINMGSTFELPEWKQKSVGKNLSYGIVSNKSILEQRESLPVFKLKRQLMKAIADNQVLVVIGETGSGKTTQMTQYMAEMGLTSTGIIGCTQPRRVAASSVAKRVAEEFGCELGQEVGYSMRFEDVTSPETVIKYMTEGMLLREYLADPTLSKYSALMLDEAHERTINTDVLFGLLKDLVRKRKDLKIIVTSATLDAEKFSRYFFDCPIFTIPGRTFPVEILYTKEPELDYLDASLLCVMQIHLSEPEGDILLFLTGQEEIDTACEVLYQRIKALQERALAPELIILPVYGALPSEMQSRIFEPAPKGSRKCVVATNIAEASLTIDGIYYVVDPGFCKQNAFNSKIGMDSLVVVPCSQASARQRAGRAGRTGPGKCYRLYTENAYKNEMLPTTVPEIQRANLGSVVLQLKAMGINDLMGFDFMDPPPQDALVMALENLYALGALDDEGLLTRLGKKMAEFPVEPKNAKVLLTSVVLGCAEEVLTIVAMLSVESVFFRPKEKQAQADQKKAKFHQPEGDHLTLLAVYEAWANSKFSNPWCYENFIQARAIRRAQDVRKQLLSILDRYKMDVVSCGKNYNKVRRAIVAGYFANTAKKDPQEGYRTMVEGQPVYIHPSSALFNKSPEWVLYHELVLTTKEYMRNIMTIEPKWLVELAPAFFKKGDPTKLSKRKRNEKIEPLYDRFNPPDSWRLSKRR 1182

[Close]

BLAST of NO29G00320 vs. NCBI_GenBank
Match: OWZ18325.1 (ATP-dependent helicase [Phytophthora megakarya])

HSP 1 Score: 1357.4 bits (3512), Expect = 0.000e+0
Identity = 797/1302 (61.21%), Postives = 948/1302 (72.81%), Query Frame = 0

Query:    4 LDKLQELSLVSKICTELDSHLGLADKTLAEFIIHLAESHGDPMSFRSALDQNGAEFPQTLSDKLFHLIKAMRPIKSGRKRAYNGGGDDDGEEHQHVEPRQARNENEAAFPGLRLQNTSRSTLYLPDVAMVGTGESLDRLKAKGVKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSRWDDXXXXXXXXXXXXXXXXXXXXXXXXXSPPSRAAAELELYGIYDGKVTKVMDFGCFVELEGVKGQLREGLVHVGQIQQGMLRDPKAAVGRGQRVKVKVISITGSKLSLSMKEVEQKTGEDLMPQRSAAGIAKAQAELRSNXXXXXXXXXXXXXXXXXXXXXGINRGVDIEAVKQRM--EDERDTRARKRMTSPELWEARQLIASGVMPASEIIGDAEGGNLLDYEETAEELEVELNDEEPAFLAGQTQFSRELSPPRIVKNPDGSLNRAAMTQNQLAKERRELRQAQVSSLIDQIPKDFNKSWIDPVPEAGERHFAQELRSINLGDNMSMPEWKEQAQKKNLSYGFIQKGSLKEQREHLPVFMLKRQFMEGMAQNQVLVVRGETGSGKTTQLTQYLAEMGFSSRGIIGCTQPRRVAASSVAKRVAEEFGCQLGQEVGYTVRFDDCTSPETIIKYMTDGMLLREYLVDGDLSRYSVVMLDEAHERTIHTDVLFGLLKDLLTRRKDFRLIVTSATLEVEKFSGYFFDAPIFSIPGRTHKVTILHANDPEPDYLDACLLTVMQIHLSEPEGDILVFLTGQEEIDTCSEILYGRMKQL--GSLAPELIILPVYGAQPSEMQSRIFEPAPPGARKCVIATNIAEASLTIDGIVYVVDPGFCKQKVFNSRMGMDALVVTPISQASAQQRSGRAGRTMPGKCFRLYTEDAFHNEMLPNSVPEIQRANLGNVVLQLKAMGINDLLGFDFMDPPPVATLISAMQNLYTLGALDEEGLLTRLGRKMAEFPLEPQLSKILITSVELACTDEILTIVAMLSVETPFYRPKDKQAQADMKKAKFFQVEGDHLTLLAVYEGWKNAKFSNPWCFENFLQARAMKRAQDVRKQLVAILDRYKMDILSAGRNFKKIQQAICSGYFTNVAKKDPQEGFKTIVDNNLVYIHPSSALFNKSPEWVLYHELVMTTKEYMRNVMAVDPKWLVELAPKFFKAADPHKLTKAKRMQKIEPLYDRFNPPNSWRLSKRKG 1302
            ++KLQELSLVSK+C  L++HLG++DKTLAEF+I L  S     +F +++ Q+    P  L++ L+ +++ M P K   K+A + GG    ++HQ  +  Q                       L    +VGT    +    K VK                                                                  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  R DD                                 ELELYGIYDG++TKVMDFG FVEL+G   + +EGLVHV  +    + + K    RG RVKVK+ISITG+KLS+SM++V+QKTG+DLMPQRS  G  +A+ E +S+                      IN         Q++  +D +  RA KRM+SPE WE +QLI SGV+   +     E   LL+ E T E+ EVELN++EP FL GQTQ SRE+SP +IVKNPDGS+ RAAMTQ+ LAKERRELRQ Q + LID IPKD N+ W DP+PEAGERHFAQELR IN+G    +PEWK+++  KNLSYG +   S+ EQRE LPVF LKRQ M+ +A NQVLVV GETGSGKTTQ+TQY+AEMG +S GIIGCTQPRRVAASSVAKRVAEEFGC+LGQEVGY++RF+D TSPET+IKYMT+GMLLREYL D  LS+YS +MLDEAHERTI+TDVLFGLLKDL+ +R D ++IVTSATL+ EKFS YFFD PIF+IPGRT  V IL+  +PE DYLDA LL VMQIHLSEPEGDIL+FLTGQEEIDT  E+LY R+K L   +LAPELIILPVYGA PSEMQSRIFEPAP G+RKCV+ATNIAEASLTIDGI YVVDPGFCKQ  FNS++GMD+LVV P SQASA+QR+GRAGRT PGKC+RLYTE+A+ NEMLP +VPEIQRANLG+VVLQ+KAMGINDL+ FDFMDPPP   L+ A++NLY LGALD+EGLLTRLG+KMAEFP+EP+ +K+L+TSV L C +E+LTIVAMLSVE+ F+RPK+KQAQAD KKAKF Q EGDHLTLL VYE W N+KFSNPWC+ENF+QARA++RAQDVRKQL++ILDRYKMD++S G+NF K+++AI +GYF N AKKDPQEG++T+V+   VYIHPSSALFNKSPEWVLYHELV+TTKEYMRN+M +DPKWLVELAP FFK  DP KL+K KR +KIEPLYDRFNPP+SWRLSKR+G
Sbjct:    1 MEKLQELSLVSKVCQALENHLGMSDKTLAEFVIDLVRSSSSCAAFLASIKQDELPLPSALAENLYRIVQTMAPRK--MKQAEDAGGKSKSKKHQIRDDEQ-----------------------LTAADIVGTSAVDEEDTKKEVK--------------------------------------------------------------SSAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRTDD------------------------------QPRELELYGIYDGRITKVMDFGVFVELDGFAREKKEGLVHVSNLSANRVSNVKEFARRGNRVKVKLISITGAKLSMSMRDVDQKTGQDLMPQRSIGGAERARQENKSSDSRSW-----------------INPSAPGMQSSQQLDEDDSKVQRATKRMSSPERWEVQQLINSGVLSVEDYPTFDEEHGLLNTEATEEDFEVELNEDEPVFLRGQTQMSREMSPVKIVKNPDGSMQRAAMTQSNLAKERRELRQTQANQLIDSIPKDLNRPWEDPMPEAGERHFAQELRGINMGSTFELPEWKQKSVGKNLSYGIVSNKSILEQRESLPVFKLKRQLMKAIADNQVLVVIGETGSGKTTQMTQYMAEMGLTSTGIIGCTQPRRVAASSVAKRVAEEFGCELGQEVGYSMRFEDVTSPETVIKYMTEGMLLREYLADSTLSKYSALMLDEAHERTINTDVLFGLLKDLVRKRNDLKIIVTSATLDAEKFSRYFFDCPIFTIPGRTFPVEILYTKEPELDYLDASLLCVMQIHLSEPEGDILLFLTGQEEIDTACEVLYQRIKALQERALAPELIILPVYGALPSEMQSRIFEPAPKGSRKCVVATNIAEASLTIDGIYYVVDPGFCKQNAFNSKIGMDSLVVVPCSQASARQRAGRAGRTGPGKCYRLYTENAYKNEMLPTTVPEIQRANLGSVVLQMKAMGINDLMVFDFMDPPPQDALVMALENLYALGALDDEGLLTRLGKKMAEFPVEPKNAKVLLTSVVLGCAEEVLTIVAMLSVESVFFRPKEKQAQADQKKAKFHQPEGDHLTLLGVYEAWANSKFSNPWCYENFIQARAIRRAQDVRKQLLSILDRYKMDVVSCGKNFNKVRRAIVAGYFANTAKKDPQEGYRTMVEGQPVYIHPSSALFNKSPEWVLYHELVLTTKEYMRNIMTIDPKWLVELAPAFFKKGDPTKLSKRKRTEKIEPLYDRFNPPDSWRLSKRRG 1168

[Close]

BLAST of NO29G00320 vs. NCBI_GenBank
Match: XP_002907406.1 (ATP-dependent RNA helicase DHX8 [Phytophthora infestans T30-4] >EEY63970.1 ATP-dependent RNA helicase DHX8 [Phytophthora infestans T30-4])

HSP 1 Score: 1357.0 bits (3511), Expect = 0.000e+0
Identity = 671/979 (68.54%), Postives = 801/979 (81.82%), Query Frame = 0

Query:  327 ELELYGIYDGKVTKVMDFGCFVELEGVKGQLREGLVHVGQIQQGMLRDPKAAVGRGQRVKVKVISITGSKLSLSMKEVEQKTGEDLMPQRSAAGIAKAQAELRSNXXXXXXXXXXXXXXXXXXXXXGINRGVDIEAVKQRM--EDERDTRARKRMTSPELWEARQLIASGVMPASEIIGDAEGGNLLDYEETAEELEVELNDEEPAFLAGQTQFSRELSPPRIVKNPDGSLNRAAMTQNQLAKERRELRQAQVSSLIDQIPKDFNKSWIDPVPEAGERHFAQELRSINLGDNMSMPEWKEQAQKKNLSYGFIQKGSLKEQREHLPVFMLKRQFMEGMAQNQVLVVRGETGSGKTTQLTQYLAEMGFSSRGIIGCTQPRRVAASSVAKRVAEEFGCQLGQEVGYTVRFDDCTSPETIIKYMTDGMLLREYLVDGDLSRYSVVMLDEAHERTIHTDVLFGLLKDLLTRRKDFRLIVTSATLEVEKFSGYFFDAPIFSIPGRTHKVTILHANDPEPDYLDACLLTVMQIHLSEPEGDILVFLTGQEEIDTCSEILYGRMKQL--GSLAPELIILPVYGAQPSEMQSRIFEPAPPGARKCVIATNIAEASLTIDGIVYVVDPGFCKQKVFNSRMGMDALVVTPISQASAQQRSGRAGRTMPGKCFRLYTEDAFHNEMLPNSVPEIQRANLGNVVLQLKAMGINDLLGFDFMDPPPVATLISAMQNLYTLGALDEEGLLTRLGRKMAEFPLEPQLSKILITSVELACTDEILTIVAMLSVETPFYRPKDKQAQADMKKAKFFQVEGDHLTLLAVYEGWKNAKFSNPWCFENFLQARAMKRAQDVRKQLVAILDRYKMDILSAGRNFKKIQQAICSGYFTNVAKKDPQEGFKTIVDNNLVYIHPSSALFNKSPEWVLYHELVMTTKEYMRNVMAVDPKWLVELAPKFFKAADPHKLTKAKRMQKIEPLYDRFNPPNSWRLSKRKG 1302
            ELELYGIYDG+V KVMDFG FVELEG   + +EGLVHV  +    + + K    RG RVKVK+ISI+G+KLS+SM++V+Q+TG+DLMPQRS+ G  +A+ E RS+                      IN         Q++  +D +  RA KRM+SPE WE +QLI SGV+   +     E   +L+ E T E+ EVELN++EP FL GQTQ SRE+SP +IVKNPDGS+ RAAMTQ+ LAKERRELRQ Q + LID IPKD N+ W DP+P+AGERHFAQELR IN+G    +PEWK+++  KNLSYG +   ++ EQRE LPVF LKRQ M+ +A NQVLVV GETGSGKTTQ+TQY+AEMG +S GIIGCTQPRRVAASSVAKRVAEEFGC+LGQEVGY++RF+D TSPET+IKYMT+GMLLREYL D  LS+YS +MLDEAHERTI+TDVLFGLLKDL+  RKD ++IVTSATL+ EKFS YFFD PIF+IPGRT  V IL+  +PE DYLDACLL VMQIHLSEPEGDIL+FLTGQEEIDT  E+LY R+K L   +LAPELIILPVYGA PSEMQSRIFEPAP G+RKCV+ATNIAEASLTIDGI YVVDPGFCKQ  FNS++GMD+LVV P SQASA+QR+GRAGRT PGKC+RLYTE+A+ NEMLP +VPEIQRANLG+VVLQLKAMGINDL+GFDFMDPPP   L+ A++NLY LGALD+EGLLTRLG+KMAEFP+EP+ +K+L+TSV L C +E+LTIVAMLSVE+ F+RPK+KQAQAD KKAKF Q EGDHLTLL VYE W N+KFSNPWC++NF+QARA++RAQDVRKQL++ILDRYKMD++S G+N+ K+++AI +GYF N AKKDPQEG++T+V+   VYIHPSSALFNKSPEWVLYHELV+TTKEYMRN+M ++PKWLVELAP FFK  DP KL+K KR +KIEPL+DRFNPP+SWRLSKR+G
Sbjct:  197 ELELYGIYDGRVAKVMDFGVFVELEGFSREKKEGLVHVSNLSANRVSNVKEFAKRGDRVKVKLISISGAKLSMSMRDVDQRTGKDLMPQRSSDGAERARQENRSSDSRSW-----------------INPSAPGMQSSQQLDEDDSKPQRAAKRMSSPERWEVQQLINSGVLSVEDYPTFDEEHGMLNTEATEEDFEVELNEDEPVFLRGQTQMSREISPVKIVKNPDGSMQRAAMTQSNLAKERRELRQTQANQLIDSIPKDLNRPWEDPMPDAGERHFAQELRGINMGSTFELPEWKQKSVGKNLSYGIVSNKTILEQRESLPVFKLKRQLMKAIADNQVLVVIGETGSGKTTQMTQYMAEMGLTSTGIIGCTQPRRVAASSVAKRVAEEFGCELGQEVGYSMRFEDVTSPETVIKYMTEGMLLREYLADSTLSKYSALMLDEAHERTINTDVLFGLLKDLVRTRKDLKIIVTSATLDAEKFSRYFFDCPIFTIPGRTFPVEILYTKEPELDYLDACLLCVMQIHLSEPEGDILLFLTGQEEIDTACEVLYQRIKALQERALAPELIILPVYGALPSEMQSRIFEPAPKGSRKCVVATNIAEASLTIDGIYYVVDPGFCKQNAFNSKIGMDSLVVVPCSQASARQRAGRAGRTGPGKCYRLYTENAYKNEMLPTTVPEIQRANLGSVVLQLKAMGINDLMGFDFMDPPPQDALVMALENLYALGALDDEGLLTRLGKKMAEFPVEPKNAKVLLTSVVLGCAEEVLTIVAMLSVESVFFRPKEKQAQADQKKAKFHQPEGDHLTLLGVYEAWANSKFSNPWCYDNFIQARAIRRAQDVRKQLLSILDRYKMDVVSCGKNYNKVRRAIVAGYFANTAKKDPQEGYRTMVEGQPVYIHPSSALFNKSPEWVLYHELVLTTKEYMRNIMTIEPKWLVELAPAFFKKGDPTKLSKRKRNEKIEPLFDRFNPPDSWRLSKRRG 1158

HSP 2 Score: 72.0 bits (175), Expect = 1.500e-8
Identity = 36/91 (39.56%), Postives = 57/91 (62.64%), Query Frame = 0

Query:    4 LDKLQELSLVSKICTELDSHLGLADKTLAEFIIHLAESHGDPMSFRSALDQNGAEFPQTLSDKLFHLIKAMRPIKSGRKRAYNGGGDDDGE 95
            ++KLQELSLVSK+C  L++HLG++DKTLAEF+I L  S     +F +++ ++    P  L++ L+ +++ M P    RK    GG   D +
Sbjct:    1 MEKLQELSLVSKVCQALENHLGMSDKTLAEFVIDLVRSSSSCTAFLASIKKDELPLPPALAENLYRIVQTMAP----RKMKQVGGSAADAK 87

The following BLAST results are available for this feature:

BLAST of NO29G00320 vs. NCBI_GenBank

BLAST of NO29G00320 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20


Match Name	E-value	Identity	Description
XP_009517810.1	0.000e+0	69.05	hypothetical protein PHYSODRAFT_553525 [Phytophtho...	[more]
ETI34370.1	0.000e+0	69.02	ATP-dependent helicase HrpA [Phytophthora parasiti...	[more]
ETK74726.1	0.000e+0	69.02	ATP-dependent helicase HrpA [Phytophthora parasiti...	[more]
ETL28161.1	0.000e+0	69.02	ATP-dependent helicase HrpA [Phytophthora parasiti...	[more]
ETM34605.1	0.000e+0	69.02	ATP-dependent helicase HrpA [Phytophthora parasiti...	[more]
XP_008896971.1	0.000e+0	69.02	ATP-dependent helicase HrpA [Phytophthora parasiti...	[more]
ETO63238.1	0.000e+0	69.02	ATP-dependent helicase HrpA [Phytophthora parasiti...	[more]
ETP32400.1	0.000e+0	69.02	ATP-dependent helicase HrpA [Phytophthora parasiti...	[more]
OWZ18325.1	0.000e+0	61.21	ATP-dependent helicase [Phytophthora megakarya]	[more]
XP_002907406.1	0.000e+0	68.54	ATP-dependent RNA helicase DHX8 [Phytophthora infe...	[more]

Pages

Relationships

This gene is member of the following syntenic_region feature(s):


Feature Name	Unique Name	Species	Type
nonsL061	nonsL061	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ncniR038	ncniR038	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ngnoR081	ngnoR081	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region

This gene is orthologous to the following gene feature(s):


Feature Name	Unique Name	Species	Type
NSK005129	NSK005129	Nannochloropsis salina (N. salina CCMP1776)	gene

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
NO29G00320.1	NO29G00320.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following gene feature(s) are orthologous to this gene:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|186010	gene_8202	Nannochloropsis oceanica (N. oceanica CCMP1779)	gene
Naga_102772g1	gene9165	Nannochloropsis gaditana (N. gaditana B-31)	gene

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
NO29G00320.1	NO29G00320.1	Nannochloropsis oceanica (N. oceanica IMET1)	mRNA

Sequences

The following sequences are available for this feature:

gene sequence
protein sequence

gene sequence

>NO29G00320 ID=NO29G00320|Name=NO29G00320|organism=Nannochloropsis oceanica|type=gene|length=9223bp
AGGTATAGACACCATGGCGGCCCTGGATAAGCTCCAGGAGCTGTCGCTGG
TGTCCAAGATTTGCACGGAGCTGGACAGTCACTTGGGTTTGGCAGATAAG
ACGCTGGCCGAGTTTATCATCCATTTAGCTGAGAGTCACGGAGACCCGAT
Ggtacgtccgcatgtggtgcaagagggggaggagcaggaagggaagtgag
agtgggaaggggaggaggggggataggatacgggtgtggccgatgggttt
gtgggagtgcgttgtgaaatgcaaggtggtaggagggtaggaagcattga
ggataaatagggcttggcagacatgtacattccctgtgttagggttatgc
cataacgtcaaagagtacggcttcatccctttactcacccttatgctccc
gccctccctcccttccttccctacagTCGTTCCGCTCAGCCCTGGACCAG
AACGGCGCGGAGTTTCCCCAGACACTCTCTGACAAGCTTTTCCACCTCAT
CAAGGCCATGAGGCCTATCAAAAGCGGGCGGAAAAGGGCTTATAATGGAG
GCGGTGACGACGACGGGGAAGAGCACCAGCATGTAGAGCCACGCCAAGCA
CGGAATGAGAACGAGGCGGCGTTTCCTGGACTAAGgtcagcagtggccct
tccttccctccctccctcccttcctccctccctcccttcctccctccctc
cttccctccctcctttcctccctccccttcgctcattccttactcctttc
tatttctttagGCTCCAAAACACGAGCCGATCCACGCTCTACCTTCCGGA
CGTGGCGATGGTAGGGACTGGGGAAAGTCTTGACCGTCTGAAGGCAAAGG
GCGTGAAGGAGGAGGAGGTTGTGAAGAAGGAGGAAGAGGAGGAGGAGGAG
GAGGAGGATCGGAATGGGAAGAGGAAAAGGGAGGAGAGGGGGAGGGAAGA
GGAGGAGCGTCAGGCCAGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAAG
GAGGGAGGGGTCGCGGGCAAAGCCGGGAGAGAGATGGTGACCGGCGCGAC
AGGGACAACGACCGAGgtacatactagtggtgcccttcctctcttcctcc
ctccttccctccctccctccctttctccttccatccctacctcttgccat
ccttttctccctgctgttcaacatcctccccctcccccctccctccctcc
ctccctccctccctccctccctccctcattttgtcaacaccaacagACTA
CTCTCGAGGCCGTGGTAGGGACAGTGGTAGGCACCGCTCAAGGGAGAGGG
ACGATGGAGATCATCGAAGGAGGGAGGGAGGGAAGGAGATGGAGAGGGAG
AGGGAGCAGGGAAGAGGGAACAGGCGACGTCATTCCTCCCGCTCGCGGTC
TTGTTCACCGTCTCGGGGGGAGAGGGAGGGAGGAAGGGAGGGAGGGAGGG
GGCGGTCGTCACGGTGGGACGACCAGGACAGGAATAGCGTGTCGTCTTCC
TCCTCTTCACGCTATGGAGGGAGGGAGGGAGGGAGGGAGCGATCGCGTTC
CCCTCCCTCTCGTGCCGCGGCCGAATTGGAGCTGTATGGGATTTATGACG
GAAAGgtagggagggagggagggagggagggagggaaggatatacctgtg
cggcccatacacacacagatgcctacttcatcctccctccctccctccct
ccctctttccctccttttctccctccccccctcctttcctcagGTAACAA
AGGTGATGGATTTCGGATGCTTTGTGGAGCTGGAAGGTGTCAAAGGACAG
CTCCGGGAGGGGCTCGTCCACGTCGGGCAGATCCAGCAGgtgcgccctcc
ttccctcctttcctcctttccttcttcccatcttcgtttcctctcctgct
gtccccctctcttcctttccctcattccaccttttcttcttctatccttc
cctccttccgtaaatcaaacactcgcacaatgatttctgaccacctcctc
cctccctccctccctccctccctccctccctccctctccagGGCATGCTT
CGAGACCCCAAGGCAGCAGTCGGTAGGGGGCAGCGGGTCAAAGTGAAGGT
CATTAGCATCACAGGCTCCAAGCTCTCCCTCTCCATGAAGGAGGTCGAGC
AGAAGACAGgtaggccccttttcttctcccttcccacttaaaaaaaaaga
atcggaatgaaaagtaataaggataactctagtcactgtcactaatcgcg
ttccagcctcctcccacactcccttcctttactccctccctccttccctc
ccatccattgaagcggtgataccaagcacgctaatccctcccaccctccc
attccctccctcccaccctccctcccttcctcagGGGAAGATCTCATGCC
CCAACGGAGCGCTGCGGGCATAGCCAAAGCTCAGGCCGAGCTGCGGTCCA
ATCCCACCGGGCCGGGGGGAGGGGGAGGAGGGGGAGGAGGGATGGGAGgt
gcgtggtgtgggggcaagggaaggagggaggggttgttccggggtactcc
gaaacaaggactactttctggcctttcatttcaaagatttttgaatttaa
attttaaattcattttaaaataaaaataaaatctcctttcttcatttctt
tcccgtcagCGTTTGCGGGCATGGGGGGGATCAATCGCGGCGTGGATATC
GAGGCGGTGAAGCAGCGGATGGAGGACGAGAGGGACACGAGGGCTCGGAA
GCGAATGACCTCGCCCGAGCTCTGGGAAGCACGGCAACTGATTGCCTCAG
gtgggaggaagggagggagggaaccagagagggagggaaggaaggaatga
gtgtgaaatgcaaagaaagtaccgggtatatcctcaccacgtttcctccg
cttctccttccctccttccgtccttccctcccctgcctccctccatccct
tccctcctccagGCGTGATGCCGGCCTCGGAGATTATCGGCGACGCAGAA
GGGGGAAATCTTCTCGACTACGAGGAAACAGCCGAAGgtatgacttctcc
ctccctcccttccttccttccttcctccctccctccctcttcctgacgtc
aacttttggagctcacatttcgcttccctccctccctcccttcctccctc
cctcctttcctccctcagAGTTGGAGGTGGAGCTGAACGATGAAGAGCCC
GCCTTCCTCGCCGGTCAGACACAGTTCTCCCGgtacgccccctccctccc
cttcctcccctccttccttctccctccccttacacgtcccttccctccta
cctcccttgcagAGAACTCTCCCCTCCCCGCATCGTGAAAAACCCCGACG
GGTCCCTCAATCGTGCGGCTATGACGCAGAACCAGCTGGCCAAGGAGCGA
CGGGAGCTTCGGCAGGCCCAGGTCTCCTCCCTCATCGACCAGATCCCCAA
Ggtacctccctccgtccctccctccctccctccctccctccctcccttcc
tccctttctccctttctccctctctccctttctctctccctccctccctt
gcttcctccctcccttgcttcttccctccctctcttgcttcctccctccc
ttgcttcttccctacctgtgccttcattcactcgtccacgctgcctccct
cttcctcactcctccttctctcctccctcccttcctcccttcctcccagG
ACTTCAACAAATCATGGATTGACCCCGTGCCCGAGGCCGGAGAGCGTCAT
TTCGCGCAAGAATTACGCAGCATTAATCTAGGCGATAACATGTCCATGCC
CGAGTGGAAGGAACAGgtgagtcctcccttttcttccctccctccctccc
tccctcatgatggccgtcggtaccctcccccttctcaccctccctccctc
ccccctccctccctcctcctcagGCTCAAAAGAAGAACCTGTCCTACGGC
TTCATCCAAAAGGGCTCACTTAAAGAGCAACGGGAGCACCTTCCGGTCTT
CATGCTCAAGCGGCAGTTTATGGAGGGCATGGCCCAGAACCAGgtatgca
cgccctccctccctccctccctccctccctccctccctccctcccttctt
agcaacccttggatgaccttccttgaatctgacgtcgtcgtcccccttcc
ctccctccctccctccctccctccctccctccctccagGTGCTCGTGGTG
CGGGGGGAGACCGGATCCGGGAAGACGACGCAGCTCACACAGTATCTTGC
TGAGATGGGgtaggaagggagggagggagggagggagggaacaagagggg
aagaaaggaaagctacaacccacacacctccatggatcccaatgtacacc
tcacccgcctgcccgcccgcccgcccgccctccctcctcccttccctcct
catcacagGTTTTCTTCCCGGGGCATCATCGGGTGCACCCAGCCCCGGAG
AGTGGCCGCCTCTTCCGTCGCCAAGCGCGTGGCCGAGGAATTCGGTTGCC
AGTTAGGACAGGAGgtaccttcctccctctctccctccctccctccctca
tttccaggtgctcaaccttccctccctccctccgtccctccctcctcctc
agGTCGGTTACACGGTGCGGTTCGACGACTGCACCTCCCCCGAGACTATC
ATCAAGTACATGACTGgtaggtgcccctccctccctcctttcctccgtcc
tcatccctccctctccgcctccctccctcaaaccttctgtgtctgtcgtc
gatatgatgtcccccctccttccctccctccctccctccctccctccctc
cctccctcagACGGCATGCTTTTGCGCGAATACCTGGTGGATGGCGACCT
CTCCCGCTACTCCGTGGTCATGCTCGATGAAGCGCACGAACGGACCATCC
ACACCGACGTCCTCTTTGGCCTCCTCAAGgtatacatgtccttccccccc
ccccccctccctccctccctccctccctccctccctcccttccctcctca
ttcttggcacatcttttctacctccctccctccctccctccctccctctc
agGACCTACTCACCCGGCGGAAAGACTTTCGGCTCATTGTCACGTCTGCC
ACCCTCGAGgtacgtcccttcccctccctccctccccctcttccccatcc
aacctaacaccctgatccgaccatccccattccctcccctcctccatcct
ttcctccctccctttccccctcccttcgtcattcacatacatatatatac
atatatacataaatgtcgccgttccaacccaccatcaccctccctccctc
cctccctccctccctccctccctacctccctccctccttacctacccagG
TGGAGAAGTTCTCGGGCTACTTTTTCGACGCTCCCATCTTCTCCATCCCG
GGACGAACACACAAGgtaggtaggtagggaaggagggagggagggaggga
gggagggaggaattgaaacatgacaaatccacatgtgtactatttgtgtt
gcaaaataccaactgccttccctccctccctccctccccccctccctccc
ttcttcagGTGACCATCCTCCACGCCAATGATCCCGAGCCCGACTACCTC
GACGCCTGCCTTCTCACAGTCATGCAGgtgcgtgcttccttccctccctc
tcaccctccctccctccttcctcacctcgatctaacgaccgtcccccctt
ccttcccttcctttctttctcctctctcttaccgagctttcatccctccc
tccccccctccctccccccctcccaagATCCACCTCTCGGAGCCTGAAGG
AGACATCTTAGTCTTCCTCACAGGCCAGGAGGAGATCGACACCTGCTCCG
AAATTCTCTACGGCCGAATGAAGCAGgtaggtagggagggagggaaggag
ggagggcagggccaaaacagatgtcattcctcatttgagcaaccgttcat
tcacctacctttctctacttatgtaccatctccccctctcttccctcctt
ccctccctccctccttccctccctccctccctccctccctccttagTTGG
GAAGTCTCGCTCCCGAGCTGATCATCCTCCCCGTCTATGGCGCCCAGCCC
TCTGAAATGCAGTCAAGGATATTCGAACCGGCACCTCCGGgtacgtgcct
tccctccctccctccctccttccctcccttcctccctccctttctgcccc
aaaaatacaggacaacggtttcccctcatccctccctccctccctccctc
ccaccccagGCGCGCGCAAGTGCGTCATCGCCACCAACATCGCCGAGGCC
TCCCTCACCATCGACGGGATCGTCTACGTGGTGGATCCCGGCTTCTGCAA
GCAGAAAGTCTTCAACTCCCGGATGGGCATGGACGCCCTCGTCGTGACGC
CCATCTCGCAGgtacctccctccttccctccttccctccttccctccccc
cctccctcgatatctctcgctctcgttctcactctcgattcaactcgcaa
tccaacgcttcctccaatacaaagaagctcctcgatctcaatcccagcct
ttactcacatctaactctctcatagatgtaatctccctctggtctaaatt
taatcttcctgtaatcgaatctaaatctccctctaatctaaatccaatct
ccttctaatgtaatcgtaatctccctcttctccatatctccctcttcctt
ccaatctcccctttaaagGCGTCAGCCCAACAACGTTCCGGTCGAGCCGG
TCGCACCATGCCGGgtacatgccctccctccctccctccctccctccctc
cctccctccctccctccctccctccctccctccctccctcccttcctccc
tgaccgactgcccaagacccaccccttcctccctccctccctccctccct
tctccagGCAAGTGCTTCAGGCTATACACCGAGGATGCCTTCCACAACGA
AATGCTCCCCAATAGTGTCCCTGAAATCCAAAGAGCCAACTTAGGCAACG
TCGTGCTGCAGgtacacgtcctccctccctccctccctccctccctccct
ccctccctcccttcccccccctttcccttcctctcgtcctgttccgcgcg
gaaaaatgcgcgaaagttgagtcacaggctcactttaccttcccctccct
ccctccctccctctctccctccctccctccctccctcccttcctccctca
gCTCAAGGCTATGGGCATCAACGACCTCCTGGGCTTCGATTTTATGGACC
CACCGCCCGTCGCTACCCTCATCTCGGCTATGCAGgtacttccttcctcc
ctccctccctcccttccatgacatctgctccctcggcgccttggacgaaa
aaggcattctcacaccctccctccctccctccctccctccctccctccct
ccctccctccctccctccctcccttccagAACCTCTACACCCTCGGCGCC
TTAGACGAGGAAGGGCTTCTGACCCGCTTAGGACGGAAGATGGCAGAATT
CCCCCTCGAGCCCCAGCTTTCCAAAATCCTCATAACGAGCGTAGAGCTTG
CCTGTACAGgtaagaaggccctccctccctccctccctcccaccctctct
ccctctccccctccctcccttcctctgttccattcacgttcctccctccc
tccctctctccctccctcctcatcagACGAGATTCTGACCATCGTGGCCA
TGTTGTCTGTGGAAACTCCCTTCTATCGCCCGAAAGACAAGCAAGCACAA
GCAGACATGAAAAAGGCCAAGTTTTTCCAGgtacgccctccctccctccc
tccctccctccctccctccttctccagccttgtgacgtgctcctttcttt
tccttgtttcacttccttccctttcccctcgccccctcctcagGTGGAAG
GCGACCATCTCACCCTCCTCGCCGTATACGAGGGCTGGAAAAACGCCAAA
TTCTCCAACCCGTGGTGCTTCGAGAACTTTCTACAGGCCCGGGCGATGAA
GAGAGCACAAGATGTGCGGAAGCAGCTGGTGGCCATCTTGGATAGATATA
AGATGGATATACTCTCGGCAGgtacgtacactatccctccctttctccct
ccctccctccctcccttcccctcccctccgtcctcgccactttcatcgtc
atccctccttccgcccctcgtctcctcctgttccatcactccatcaccca
cctaccctccctccctccctccctccctccctccctccctccctccctcc
ctcccccggcagGCCGGAACTTCAAGAAGATTCAACAGGCCATATGCTCC
GGGTATTTTACCAACGTGGCGAAGAAGGATCCTCAGGAGGGCTTCAAGAC
GATCGTGGACAACAACCTTGTCTATATCCATCCCTCCTCCGCGCTCTTCA
ACAAGAGTCCCGAGTGGGTGCTCTATCACGAGCTCGTGATGACCACCAAg
tacgtatctgccctccctccctccctccctccctccctccctccctccct
cccttccttcctccctctctggatagctcaacgtatctccatcatggacc
atcccacctcactagaactcaccctccctccctccctccctccctccctc
cctccctccctccctccctccctctctctccctcaatcacagGGAATACA
TGCGGAACGTCATGGCTGTTGATCCCAAGTGGCTCGTGGAACTCGCGCCA
AAATTCTTCAAGGCGGCAGACCCGCACAAGCTCACCAAGgtaaggagaga
gggagggagggagggagggagggagggagggagggaaagggcgattcttg
acattcatgtgcatgagccgtaatttctttcctccgtcattcctccttgc
tatctttctgcttgccctccttcccaccctccttccctccgtccctcctg
ctccctccttccacagGCCAAGCGGATGCAGAAAATCGAGCCGTTGTACG
ATCGCTTCAACCCGCCCAACTCCTGGCGCTTGTCCAAGAGGAAGGGATAG
AGGGAGGGAGACGGAGGGAGGGGCGAAGGGACGGAGACGGAGGGAGGAAT
AGAAGGAGGGAGGCGGGGATGAAAGACGGGAGTGTACGGGCTCGTCAGGG
GGGGTCAGACCGCAGGAAGAAAGGACGGCGGCAAGATAAGAACAAGCAGC
CAAATCGTCAGCACCAGCACCAACAGCATCGATAAGCGAAAGAAAGAAAA
AAGGTAACCAATTACCACGAGCA

protein sequence of NO29G00320.1

>NO29G00320.1-protein ID=NO29G00320.1-protein|Name=NO29G00320.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1302bp
MAALDKLQELSLVSKICTELDSHLGLADKTLAEFIIHLAESHGDPMSFRS
ALDQNGAEFPQTLSDKLFHLIKAMRPIKSGRKRAYNGGGDDDGEEHQHVE
PRQARNENEAAFPGLRLQNTSRSTLYLPDVAMVGTGESLDRLKAKGVKEE
EVVKKEEEEEEEEEDRNGKRKREERGREEEERQARREGGREGGREGGRGR
GQSRERDGDRRDRDNDRDYSRGRGRDSGRHRSRERDDGDHRRREGGKEME
REREQGRGNRRRHSSRSRSCSPSRGEREGGREGGRGRSSRWDDQDRNSVS
SSSSSRYGGREGGRERSRSPPSRAAAELELYGIYDGKVTKVMDFGCFVEL
EGVKGQLREGLVHVGQIQQGMLRDPKAAVGRGQRVKVKVISITGSKLSLS
MKEVEQKTGEDLMPQRSAAGIAKAQAELRSNPTGPGGGGGGGGGMGAFAG
MGGINRGVDIEAVKQRMEDERDTRARKRMTSPELWEARQLIASGVMPASE
IIGDAEGGNLLDYEETAEELEVELNDEEPAFLAGQTQFSRELSPPRIVKN
PDGSLNRAAMTQNQLAKERRELRQAQVSSLIDQIPKDFNKSWIDPVPEAG
ERHFAQELRSINLGDNMSMPEWKEQAQKKNLSYGFIQKGSLKEQREHLPV
FMLKRQFMEGMAQNQVLVVRGETGSGKTTQLTQYLAEMGFSSRGIIGCTQ
PRRVAASSVAKRVAEEFGCQLGQEVGYTVRFDDCTSPETIIKYMTDGMLL
REYLVDGDLSRYSVVMLDEAHERTIHTDVLFGLLKDLLTRRKDFRLIVTS
ATLEVEKFSGYFFDAPIFSIPGRTHKVTILHANDPEPDYLDACLLTVMQI
HLSEPEGDILVFLTGQEEIDTCSEILYGRMKQLGSLAPELIILPVYGAQP
SEMQSRIFEPAPPGARKCVIATNIAEASLTIDGIVYVVDPGFCKQKVFNS
RMGMDALVVTPISQASAQQRSGRAGRTMPGKCFRLYTEDAFHNEMLPNSV
PEIQRANLGNVVLQLKAMGINDLLGFDFMDPPPVATLISAMQNLYTLGAL
DEEGLLTRLGRKMAEFPLEPQLSKILITSVELACTDEILTIVAMLSVETP
FYRPKDKQAQADMKKAKFFQVEGDHLTLLAVYEGWKNAKFSNPWCFENFL
QARAMKRAQDVRKQLVAILDRYKMDILSAGRNFKKIQQAICSGYFTNVAK
KDPQEGFKTIVDNNLVYIHPSSALFNKSPEWVLYHELVMTTKEYMRNVMA
VDPKWLVELAPKFFKAADPHKLTKAKRMQKIEPLYDRFNPPNSWRLSKRK
G*

Synonyms

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