NO29G00250, NO29G00250 (gene) Nannochloropsis oceanica

Overview
NameNO29G00250
Unique NameNO29G00250
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length4880
Alignment locationchr29:94602..99481 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr29genomechr29:94602..99481 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO29G00250 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR079ncniR079Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR081ngnoR081Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO29G00250.2NO29G00250.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO29G00250.1NO29G00250.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO29G00250.2NO29G00250.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO29G00250.1NO29G00250.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO29G00250 ID=NO29G00250|Name=NO29G00250|organism=Nannochloropsis oceanica|type=gene|length=4880bp
GGAGGAAGGGAGAGAGGGAAGGAGGAAGGCAGCTCGAGGGAGGGGGTGAG
AGGGAGGAAGGGAGAGGATGGGAGTTGTATCTCTTTCAGTACTTTCTTCC
CACTTTGGTCACTTTCCTCTTTGGAGGAAGGAGGCGGGGAGGGAGGGAGG
GAAAGCAGAGGCGACAATGACCCTTCCGTTCCTTTCTTTCGTTTCCCTTC
ATCTCCCTTGTCTTCTTTCTTCTACTCGCGCTCTTCCTTCTTCAAATTTT
CCCTTCTTGTCTTATCTTCCACCTTTCAATCTTTCCCTTGGGTGTCTTTG
TGTATGTGTGTGTCTCACGCATACGCATGCGCCGACAAGCACACGCACTC
ATATGTCATGCCTTCATCTAAAAGTTGATTTATCTCTCAGACAGAGGGTC
GATTTGGGGAGGATGGGAGAAGGAAGAGAAGGAGGGAGAGCAGGTGACTT
GTCTAGCGGCCAAGGCGGAAAGGGATAGGAGGAGGAATGTGGAGGAGGTA
AAGAGGAGGAAGAAGGAGAGAGAGAGTGTTTTTTTCATCTATTTATTTAC
TCATTTATTTATTAAATTAAATAAATGAGTAAATAAATAATTCCGAGTCC
TATTTTTTGTGTGAATTCTTGCAAGAGACTCTCCTCCTTCTTGGCTAGCT
TTCTCTTCCCTTTTTTGGGGGGGCGGACTGCTAGTCTGTGTGCCCGCAAT
TTCTATATATTTGTTTATTTTATGTAATTTATTTTATTCATTTATGTGGA
TAAAATTTATTCATTGATAACAAATGTTTTTGCGCAGGAAGGGATAGGGA
GCAAGGGGGTAGAGGGCTGTTCATTCCCACCCACAGGACTCGAAGCGCGA
CACTTTTTTCCCATTGAATTATAGGAGAGAGAGTATTTAGAGAGACTGAG
AAGCCCTAGACTGGAATGATCCTCCCCTTTTTGGTTCTCGCAAGAGACCC
AAAACGCATCTTGTTTACCTTCATATGATAATGATGGTAATTTAAGGTGT
GCTTCCCTCCCTTCCTGCCTCACTTCCCGGACCCTCAACCCTTTTGTCTT
GCCCCTCTTAAGGCCTCTCTCCCTCCTTCCTTCTTTTCGTCGGAAGGGGG
GGAAGGTCAGGAGGGGCTCCTTCTCCTCCTAGTCCTCCTCCTCCTCCTCC
TCCTTCTTCACTCCTTTATTTTGGGTCGGATCCAAAATGTTGTTCTCCCG
TCTTTGTCCTTCTCTTTCTCTCTTCTCCTCTCCTTGGGCAGACGCCGTGT
AAAAAAGTGTCGCATCTCTTCCACCTCTTTCTTTCTCTTCAAGTTCAATC
AACCAGTCAATAAAAATAATTTCCTTAGAGGAAATCCCCCTTCCTCCCCC
CTTTCCTTCTTTTCCTCCACTATTTTCTTCTCTTCTTCCCAAGGGTTGGG
GGGGAAGGAGATAAGGAGGAGGGGACGGCACAAAATTAGCATGCGCTCGG
TGGGATGAGTGGATGTGTGCGAGAGAAAGAGAGAAAGAAAGGAGGGGGTC
CCTTGCCGTCTCAATTTTTTATTTAATTGAATAAGTATTAATTTACTCAT
TCGATTAATGTATTTATTCAATCCCTCTTTATTTTTCCAAGGAGATTTTC
ATTTATTTATTTGAATGCAAGAATGATATATTGAAGAGAGAGGTAGTAAA
CAATAATCACTAATAGTACGTCATATCTTATAATAATAATATTGATAAAA
GGATTAATCGTGCGTCTGTGTATATGGTGGTGATCGTGTATGTGTCTCCT
CCGGACCGCTAGCCCCTCTGTATTTCCTCCTCTTTTTTCCCTCTCCATCA
TTGCACCCCTTCCCCCCTCTTCCTCCCTCCATCTCGAACCCGCTCTCCTT
CCCTCCCATTCTTTATGTCCTCTCTCCTCTTCTACCTTTTTTTATTCTCT
CTTTCGATCCCTGACGGGTTGGGATGTCTATGTTTCTCTTTCTGCTCTCT
CTTACTTCTTTTTGAGAAGAGGAGGGAGGAAGGAAGGGAGGGAGGAGTGT
TATCGGGCAGAAAAGATGACTGACGACGAGTCTCCTTCTTGGTGTGTGTC
TGTGTGACTCGTTACCTTTTTCATGAGATGTCACATACTTAGGGAATGAA
CAGCCCCACTGTGGAGGATGGATCATCAATTTATTAATTAATCAAATGAT
TGTTCAATTATTTTGATTAAAGAAAGAGGGTGAAAAGAACTGTGAAGGGC
GCATGTTTTAATTGTATGTGGATGAGTGGCTGAATACTGACGCATGCGTG
TTGTAAAACAAGAAGAGAGGGGGAGAAAGGAGAAAAAAGGCATGAAGAGG
GGAGGGAGGGAGGAAGGGGAGGATGGGAGGATGGGAGGGAGAGGTGAGGT
GGGAGCATGCAGTCTTGAGAAGGGGGGCCAGACGAGGAGGCAAGTATCTG
TCATTTTTTCCTGTCCTTTTTGTCCCTCTCTCTCTTCATTTTCAGTCTTT
GTCCTTCATCCCCTTCTTGCTTGGTTTTGGCCTGTACATTTGTTGTATTG
TCGAGATCAGGGCGCCTCCCCCTTTTGATTATTCGTTTAAATGAGTAATG
GGGGAGGAAAAGGAGGGGAGAAAGGCGCACGGTGTTTCGTCGCCCAGCCT
TGTCGAAGGAGGAGACAGAGCAGGGAGAGAGGGAGGAGGAGGAGGGTGCG
GGAGGGAGGGATGGAGGCAAGGGTGAAGAGGGCGGGGAGGTAGCGTTCTG
CTGTTTCCATGGCTCTCGTCCCTTCCACAGCTTGTCCGTTCCGAGGACTC
TCGTTTCTCTGTCAGGTCACGGTTTGTTCTCTCTCACTTCTTAATCCTCC
TTGTCACCATCTTTCGTCGTCCATGTCCTCTCTTCTGGTACTCCTTTACG
GGTTTTTTCCTCTTCTTTTACTCCATCTTCATTTTTTCACGTGTGTGCGT
GTGCGAATGATTATTTCATCCCACACCCCAAAGGAATGCCCTTCTCGTTT
ATCTCCTTTTACCTTCTTTCGTATTTTTAAATTTGTGAATTTCCTCCTTT
TTTCCAGTAAAATCTTTACGATTTTATTGCTCATGGAGAAGAGGAGAAAT
GAGTAAATCGTATTTATTCATTTATTTATATCTATAAATACTCGTAATGT
CGAACGAATCCCAAAAATAAATTGACTGAGCGGAATTTCTTAATTAATAT
ATGCATGTGTTCATTTTAGTGAGAAATAAAAGAATAGGATAATTGTAGTA
GTGGTGAACATTCTCAATTCTTCCCTTCCTCTCCTCAGACACGCTGACAC
TCACCCGCCCTTCCAACCCTCCCTCATCTCCTCCCTCCCTCCCCATCCAT
CCACGAGGCAAAAGAAACGGATGATTCAATTACGTCGAGCATCAGCAAAG
GTCCTGAGTAGAGGGGTAGGTAGAAGAGAGGGAGGAAATGCAGCAGCAGC
AGCAGCAGCAGCAGCAGCAACAGCAGCAGCAGCAGTAGTAGCAAGACCGA
TCACGGCAAGGAAACGGCCATGTACTGTCCTTTTCTCCTCCTTCTCCTTC
GCCTCCTTCTCCTTCTCCTCCTTTTCCTCCTTCTCCTCCTTCGCTATCTT
CTCCTCCTCTTGTTCCTCCTTCTCCTCCTCCTCTTCTTCCTCCACCCGGA
TCCCTCTCACTCTCTTCTCCCCCTCCCTCTCCTGCCCCCTCGAACGACCC
ACACCTGTCCTCGTTCTACCTCCCGAGACCAAACGGAGAAAAGGCAGCAG
CATGACCACAGCAGTCACTACTGGTGCCAGCGCCTCTTCCTTCCTCCAAC
CCTCCCTCCCTCCCTCTTCCTCCTTCGCCTCCTCCTCCTCCTCCCCCTCG
TCGGAAATGGAATGGGCGCCGCTGGTGGATTTTTTCACTGAGCGAGGAGT
GACCGTCGGgtgagtgcaaggatggagggagggagtgagaggagggagaa
aatgggaggaaagtgggtaggagagaagggagaaggagggagagagggag
gatggcaaacaccctgtgattgaacaacttctcatcgcgcttcctccctt
ccttcccccatttctcccttcctcgtccctccctcctcacaccagCTTCA
TCTCCGGGATCCACCGCGATTGCTCCTCTCTGTCGCTCGCTGACTATGAG
GGACGGCTCGTCGCAGCTGTGAAGGATCTTGCCACCCCCAGCCCTGTTGT
CATCGCGTTGTCGCCCTTGATGgtatggcagggagggaggccgggaggga
ggcagggaggaagatttgctctatttttgatccttgtttcagcaccacaa
ttacatcctagcccctccgacttgtatatcctcccccccctttccctccg
tcactccctctcttcctcctttccttccctccttccctgcctccctaagA
GCTTTGTCGCTCAAAAGTACCTGGAGTCTCACGCTGCTGCCGGTGTTGTC
CTCCTCGACCCCCTTCCTCCCTCCCCCTCCTCCCCCTCCTCCTCCTCCGG
CAGCGCTCTTCAACGATACTCTCGATGGGTACGGACGGAGGGAGGGGAGG
AGGACGGGGAGGAGGACGGGGACGACGGTGAATTTCCTTGGCAGGCGATG
AAGGAGGCAGGGAGGGAGGGAGGGGACGTGAAGCTGGAGAGCGGAATCAT
GGACTGGCTCGTGCTTCTAAGTGGAGAACCGCCAAGCGGAGGAGGAAGGG
AGGAAGGGATGGACGGGGCGCATCCGTTTTTGACGAGGGAGGACGTTCAG
GCCTTGACTGAGATGCATGGAATGGATGGGAAGGAGAATGTGAAGGTGTT
GAGGGAGAGAGGGAGGGAGGGAGGAATGGAGGAGGGGCCGGAGCGGCAGG
CGGTGGAGATGGCGGGTCTGGTGTATGGATGGTACGATGATCGATTTTGA
GCATTGTAATGTTTGAGTATCGGAGTATAT
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protein sequence of NO29G00250.2

>NO29G00250.2-protein ID=NO29G00250.2-protein|Name=NO29G00250.2|organism=Nannochloropsis oceanica|type=polypeptide|length=448bp
MIQLRRASAKVLSRGVGRREGGNAAAAAAAAAATAAAAVVARPITARKRP
CTVLFSSFSFASFSFSSFSSFSSFAIFSSSCSSFSSSSSSSTRIPLTLFS
PSLSCPLERPTPVLVLPPETKRRKGSSMTTAVTTGASASSFLQPSLPPSS
SFASSSSSPSSEMEWAPLVDFFTERGVTVGFISGIHRDCSSLSLADYEGR
LVAAVKDLATPSPVVIALSPLMVWQGGRPGGRQGGRFALFLILVSAPQLH
PSPSDLYILPPLSLRHSLSSSFPSLLPCLPKSFVAQKYLESHAAAGVVLL
DPLPPSPSSPSSSSGSALQRYSRWVRTEGGEEDGEEDGDDGEFPWQAMKE
AGREGGDVKLESGIMDWLVLLSGEPPSGGGREEGMDGAHPFLTREDVQAL
TEMHGMDGKENVKVLRERGREGGMEEGPERQAVEMAGLVYGWYDDRF*
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protein sequence of NO29G00250.1

>NO29G00250.1-protein ID=NO29G00250.1-protein|Name=NO29G00250.1|organism=Nannochloropsis oceanica|type=polypeptide|length=389bp
MIQLRRASAKVLSRGVGRREGGNAAAAAAAAAATAAAAVVARPITARKRP
CTVLFSSFSFASFSFSSFSSFSSFAIFSSSCSSFSSSSSSSTRIPLTLFS
PSLSCPLERPTPVLVLPPETKRRKGSSMTTAVTTGASASSFLQPSLPPSS
SFASSSSSPSSEMEWAPLVDFFTERGVTVGFISGIHRDCSSLSLADYEGR
LVAAVKDLATPSPVVIALSPLMSFVAQKYLESHAAAGVVLLDPLPPSPSS
PSSSSGSALQRYSRWVRTEGGEEDGEEDGDDGEFPWQAMKEAGREGGDVK
LESGIMDWLVLLSGEPPSGGGREEGMDGAHPFLTREDVQALTEMHGMDGK
ENVKVLRERGREGGMEEGPERQAVEMAGLVYGWYDDRF*
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Synonyms
Publications