NO29G00240, NO29G00240 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO29G00240 vs. NCBI_GenBank
Match: EWM21243.1 (SGF29 tudor-like domain protein [Nannochloropsis gaditana]) HSP 1 Score: 473.4 bits (1217), Expect = 4.800e-130 Identity = 226/276 (81.88%), Postives = 253/276 (91.67%), Query Frame = 0 Query: 1 MAYSKHHEESGTYLEDFLERLQPLPNDIQRSFHLMRELDKDSTELHIRLSDMERRYLSQSKKKLHGVKETNPEERLKIIEDKQATEDIANLRALIMTKQREKVDVANQISEMIDQHMRLLKVDMGNFQTELRETGEYDFLGARKGDSVAFKQNVYETHFVLGKVAAYRGESGSYEVVDVDDDLRVYTLPETQVVLLNPGSEAQRLKYQKGDEVFAVYPETTSFYLGTIAQPPRRGVGHGGPGQDVPKLAVQFQDDADETGFTPIRWVPVQHIFKAI 277 MAY+KHHEESGTYLEDFLERLQPLPNDIQRSFHLMRELDKD+TELH+RL +E++YL Q+K+ L G KE+ PEERLK++EDK+A+ +IA+LRALIM KQREK+DV NQ+S+M+ HMR+LKVDM NFQTELRETGEYDFLGARK D+VAFKQNVYETHFVLGKV YR +SG+YEVVDVDDD +YTLPETQ+VLLNPGSEAQRLKYQKGDEVFAVYPETTSFYLGTIAQPPRRG+GH G GQDVPKLAVQFQDDADE G TPIRWVPVQH+FKAI Sbjct: 1 MAYAKHHEESGTYLEDFLERLQPLPNDIQRSFHLMRELDKDATELHVRLRGLEKQYLGQAKRSLQGAKESKPEERLKLVEDKEASAEIADLRALIMAKQREKIDVVNQVSDMMKHHMRMLKVDMDNFQTELRETGEYDFLGARKDDAVAFKQNVYETHFVLGKVVNYRADSGAYEVVDVDDDSHIYTLPETQIVLLNPGSEAQRLKYQKGDEVFAVYPETTSFYLGTIAQPPRRGMGHSGLGQDVPKLAVQFQDDADEFGHTPIRWVPVQHVFKAI 276
BLAST of NO29G00240 vs. NCBI_GenBank
Match: CBJ32510.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 175.3 bits (443), Expect = 2.700e-40 Identity = 104/276 (37.68%), Postives = 163/276 (59.06%), Query Frame = 0 Query: 1 MAYSKHHEESGTYLEDFLERLQPLPNDIQRSFHLMRELDKDSTELHIRLSDMERRYLSQSKKKLHGVKETNPEERLKIIEDKQATEDIANLRALIMTKQREKVDVANQISEMIDQHMRLLKVDMGNFQTELRETGEYDFLGARKGDSVAFKQNVYETHFVLGKVAAYRGESGSYEVVDVDDDLRVYTLPETQVVLLNPGSEAQRLKYQKGDEVFAVYPETTSFYLGTIAQPPR-RG-VGHGGPGQDVPKLAVQFQDDADETGFTPIRWVPVQHIFK 275 MAY +E T+++DF++ + +PN+I+R+ LMR LDKD+ L L + ++L Q+++K+ ++ + +++D +I +L + EKV +A+Q +M+ ++ L D+ +F+ L GE+D A+ GD VAF+++ E +VLG+V ++ E+G YEV+D DD+ + T+ E QV+ L E + + KGD+V AVY +TTSFY TIA PPR RG +G+GG VQF DDADE G TP R VP+ HI K Sbjct: 1 MAYRGPMQEEATFVDDFMDGMTTMPNEIRRNSQLMRTLDKDAHGLSSELEALHNKFLGQAREKMKARGDSQELDPKVLVDDPPLMAEIDSLFSRTKQIVDEKVAIADQTHQMVADRLKRLTTDLASFEQTLHSQGEFDVGAAQPGDQVAFQEDP-EADWVLGRVLSWMHETGQYEVMDEDDNSKKLTMDEHQVIPL----EGRTERLSKGDDVLAVYVDTTSFYHATIAIPPRGRGQIGNGGTAH------VQFVDDADEHGVTPHRAVPIIHIIK 265
BLAST of NO29G00240 vs. NCBI_GenBank
Match: XP_002180913.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC47565.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 127.5 bits (319), Expect = 6.500e-26 Identity = 84/283 (29.68%), Postives = 149/283 (52.65%), Query Frame = 0 Query: 12 TYLEDFLERLQPLPNDIQRSFHLMRELDKDSTELHIRLSDMERRYLSQSKKKL------------HGVKETN--------PEERLKIIEDKQATEDIANLRALIMTKQREKVDVANQISEMIDQHMRLLKVDMGNFQTELRETGEYDFLGAR--KGDSVAFKQNVYETHFVLGKVAAYRGESGSYEVVDVD-DDLRVYTLPETQVVLLNPGSEAQRLKYQKGDEVFAVYPETTSFYLGTIAQPPRRGVGHGGPGQDVPKLAVQFQDDADETGFTPIRWVPVQH 272 TYLE F+E L LP++++R+ L+++LDK S L +++RY+ Q++ K+ HGV+ + E ++ +++ + I + + K EK+ +A Q + ID + L D+G + L+ TG++ + K + +A Q E+ ++L KV + ++G Y++ D D + +++TLPE+QV++L K + GD V+AVYP+TTSFY T+ Q PR+ P + V F DD+DE G T ++VP+++ Sbjct: 65 TYLEAFIETLSTLPHEVRRNMDLIKDLDKASGVRGETLRQLQQRYIHQAEDKMMQLELVEREDGTHGVRVIDGTEVIIPTTYELVEYVQNAELERQIQQAQEDCLQKADEKIAIAQQALDRIDAVCQRLDHDLGAMELLLQNTGDFQTQETKTAKPNDLAACQITPESEWILAKVVTFDPQTGVYKLADEDVESNKLFTLPESQVIILYAIE-----KLRAGDSVYAVYPDTTSFYPATVVQAPRKA--------STPFVTVNFVDDSDEFGVTHDKFVPLKY 334
BLAST of NO29G00240 vs. NCBI_GenBank
Match: GAX25018.1 (SAGA-associated factor 29 [Fistulifera solaris]) HSP 1 Score: 120.6 bits (301), Expect = 7.900e-24 Identity = 94/286 (32.87%), Postives = 141/286 (49.30%), Query Frame = 0 Query: 12 TYLEDFLERLQPLPNDIQRSFHLMRELDKDSTELHIRLSDMERRYLSQSKKKL-----------HGVKETNPE-------------ERLKIIEDKQATEDIANLRALIMTKQREKVDVANQISEMIDQHMRLLKVDMGNFQTELRETGEYDFLGARKGDSVAFKQNVYETHFVLGKVAAYRGESGSYEVVDVD-DDLRVYTLPETQVVLLNPGSEAQRLKYQKGDEVFAVYPETTSFYLGTIAQPPRRGVGHGGPGQDVPKLAVQFQDDADETGFTPIRWVPVQHI 273 TYLE F+E L LP ++R+ L+++LD+ +L ++ YL Q+++K+ GV+ E E + D A I L+A + K EKV VA Q E ID + L D+ L+ GE+ + + +A Q T ++L KV + ++ +Y++VD D + +V+ LPE QVV+L G + + KGD VFAVYP+TTSFY T+ Q PR+ GQ P + V F DD+DE G T + V +QHI Sbjct: 7 TYLESFVESLTTLPYQVRRNLELVQDLDRSYQSDLAKLQELYTAYLQQAEEKVLQLEVAPMETGKGVRVIRKEDAEKAPIIIPTTAELMAYTYDADAMRQIEALQADCLQKADEKVCVARQAYEWIDAVVERLDDDLQALSKILQAQGEFQQEEVAQPNDLAACQ--LGTEWILAKVLEFDTKTRTYKLVDEDVESHKVFHLPEDQVVILR-GVD----RLSKGDTVFAVYPDTTSFYQATVVQVPRKTA-----GQSSPFVIVSFMDDSDEFGVTHDKTVQLQHI 280
BLAST of NO29G00240 vs. NCBI_GenBank
Match: GAX26748.1 (SAGA-associated factor 29 [Fistulifera solaris]) HSP 1 Score: 118.6 bits (296), Expect = 3.000e-23 Identity = 92/286 (32.17%), Postives = 138/286 (48.25%), Query Frame = 0 Query: 12 TYLEDFLERLQPLPNDIQRSFHLMRELDKDSTELHIRLSDMERRYLSQSKKKL-----------HGVKETNPE-------------ERLKIIEDKQATEDIANLRALIMTKQREKVDVANQISEMIDQHMRLLKVDMGNFQTELRETGEYDFLGARKGDSVAFKQNVYETHFVLGKVAAYRGESGSYEVVDVD-DDLRVYTLPETQVVLLNPGSEAQRLKYQKGDEVFAVYPETTSFYLGTIAQPPRRGVGHGGPGQDVPKLAVQFQDDADETGFTPIRWVPVQHI 273 TYLE F+E L LP ++R+ L+++LD+ +L ++ YL Q+++K+ GV+ E E + D A I L+A + K EKV VA Q E ID + L D+ L+ GE+ + + +A Q T ++L KV + + +Y+++D D + +V+ LPE QVV+L + KGD VFAVYP+TTSFY T+ Q PR+ GQ P + V F DD+DE G T + V +QHI Sbjct: 7 TYLEAFVESLTTLPYQVRRNLELVQDLDRSYQSDLAKLQELYTAYLQQAEEKVLQLEVAPMEAGKGVRVIRKEDAENAPIIIPTTAELMNYTYDADAMRQIEALQADCLQKADEKVCVAKQAYEWIDAVVERLDDDLQTLSKLLQAQGEFQQEEVAQPNDLAACQ--VGTEWILAKVLEFDTATRTYKLIDEDVESHKVFHLPEDQVVILRCLD-----RLSKGDTVFAVYPDTTSFYQATVVQVPRKTA-----GQSSPFVIVSFMDDSDEFGVTHDKAVQLQHI 280
BLAST of NO29G00240 vs. NCBI_GenBank
Match: GBG28387.1 (SAGA-associated factor 29 [Aurantiochytrium sp. FCC1311]) HSP 1 Score: 107.5 bits (267), Expect = 7.000e-20 Identity = 81/275 (29.45%), Postives = 137/275 (49.82%), Query Frame = 0 Query: 11 GTYLEDFLERLQPLPNDIQRSFHLMRELDKDSTELHIRLSDMERRYLSQSKKKLHGVKETNPEERLKIIEDKQATED---IANLRALIMTKQREKVDVANQISEMIDQHMRLLKVDMGNFQTELRETGEYDFLGARKGDSVAFKQNVYETHFVLGKVAAYRGESGSYEVVDVDDDLRVYTLPETQVVLLNPGSEAQRLKYQ---KGDEVFAVYPETTSFYLGTIAQPPRRGVGHGGPGQDVPK----LAVQFQDD--ADETGFTPIRWVPVQHIF 274 G+ LE++L+ LQ +P +I+R LMR+LD+ T+ RL+ ++ + +++++ ET PE R ++++ + +++ + +RA + K EK +++Q+ +M +Q+++ L+ D+ + L+ +GE G VA T V + V DVDD Y LP T+VVLL K + +G +V AVYP+TT FY T+ P R G+G P VQF DD TG T +VP +++F Sbjct: 15 GSVLEEYLDMLQVMPVEIRRYTTLMRDLDQKCTKEVHRLAALQGTLVERAREQC--ANETTPEGRAQVVKKLRESDEFKPLVTMRASLKQKIAEKRSISDQLFDMSEQNLKRLRSDIDYLKDILQLSGEIQESPYTPGRLVAAYIEADATWIVCKVSEFSQANPDLVTVADVDDSKTRYVLPVTKVVLLADKETLNTAKVRLSSRGKKVLAVYPKTTCFYKATLVSTPFRESGNGPSAMPHPPGTILCGVQFDDDDVDQATGSTMKHFVPTKYVF 287
BLAST of NO29G00240 vs. NCBI_GenBank
Match: OEU14692.1 (hypothetical protein FRACYDRAFT_188007 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 99.8 bits (247), Expect = 1.400e-17 Identity = 85/300 (28.33%), Postives = 141/300 (47.00%), Query Frame = 0 Query: 12 TYLEDFLERLQPLPNDIQRSFHLMRELDKDSTELHIRLSDMERRYLSQSKKKL--------HGVKETN--------------PEERLKIIEDKQATEDIANLRALIMTKQREKVDVANQISEMIDQHMRLLKVDMGNFQTELRETGEY--DF-------------LGARKGDSVAFKQNVYETHFVLGKVAAYRGESGSYEVVDVD-DDLRVYTLPETQVVLLNPGSEAQRLKYQKGDEVFAVYPETTSFYLGTIAQPPRRGVGHGGPGQDVPKLAVQFQDDAD-ETGFTPIRWVPVQHI 273 TYLE F+E L LP +++R+ LM+++D + L ++ Y+ + + K+ GV+ + EE + + + I +LRA + + EKV++A Q +MID + L D+ + EL + DF GA K + +A Q + ++L KV + ++G + + D D + +V+ LP + V++L + + GD VFAVYP+TTSFY GTIAQ PR+ G G + + F DD D TG T + V ++H+ Sbjct: 11 TYLEGFIESLSTLPAELRRNLDLMKDMDGSCSTLMDETMRLQLDYIRRVEDKIGRLEVVDGEGVRVLSNNDDIRKLPVVIPTTEELMAYVHEPTTLSQIESLRADSLQQAEEKVEIAKQTYKMIDNLYQKLDADLRQREMELSLSTRNGPDFHHHHPSNATATMNQGAPKLNDLAAIQVPGTSDWILAKVVTHDPKTGMFTLSDEDVESNKVFNLPASSVIILE-----RMRNIRSGDVVFAVYPDTTSFYQGTIAQQPRKAAGGG------MFVTITFLDDEDAATGETHDKAVLLKHV 299
BLAST of NO29G00240 vs. NCBI_GenBank
Match: EWM22464.1 (SGF29 tudor-like domain protein [Nannochloropsis gaditana]) HSP 1 Score: 90.9 bits (224), Expect = 6.700e-15 Identity = 48/116 (41.38%), Postives = 66/116 (56.90%), Query Frame = 0 Query: 159 FVLGKVAAYRGESGSYEVVDVDDDLRVYTLPETQVVLLNPGSEAQRLKYQKGDEVFAVYPETTSFYLGTIAQPPRRGVGHGGPGQDVPKLAVQFQDDADETGFTPIRWVPVQHIFK 275 ++L +V Y E +Y+V D DD V LP V+ L+ E L QK D V AV+P+TTSFY + + P+R G GP ++ V+F+DD DETG TP R VP +H+ K Sbjct: 256 WILARVIQYAPERDTYQVRDEDDHANVQVLPSANVICLH---EENLLDVQKNDTVLAVFPDTTSFYRAQVTKVPKRAQGGLGP----LEVMVKFEDDEDETGRTPHRRVPARHVLK 364
BLAST of NO29G00240 vs. NCBI_GenBank
Match: CBJ26159.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 83.6 bits (205), Expect = 1.100e-12 Identity = 51/124 (41.13%), Postives = 70/124 (56.45%), Query Frame = 0 Query: 145 GDSVAFK-QNVYET-HFVLGKVAAYRGESGSYEVVDVDDDLRVYTLPETQVVLLNPGSEAQRLKYQKGDEVFAVYPETTSFYLGTIAQPPRRGVGHGGPGQDVPKLAVQFQDDAD-ETGFTPIR 266 G+ VA K N E ++L ++ Y YEV D DD L+ +P+ V+ L G + + KGD+V AV+P+TTSFY GTI++ P R G V +L VQF+DDAD +TG TP R Sbjct: 133 GEQVAAKVTNTNENGSWILAEIIRYLAGRACYEVKDADDPLKQIEVPDNNVIRLREGGQG----FAKGDDVLAVFPDTTSFYRGTISKQPVRKAGL------VAELVVQFEDDADQDTGKTPHR 246
BLAST of NO29G00240 vs. NCBI_GenBank
Match: CBJ48948.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 81.6 bits (200), Expect = 4.100e-12 Identity = 49/134 (36.57%), Postives = 78/134 (58.21%), Query Frame = 0 Query: 142 ARKGDSVAFKQNVYET-HFVLGKVAAYRGESGSYEVVDVDD--DLRVYTLPETQVVLLNPGSEAQRLKYQKGDEVFAVYPETTSFYLGTIAQPPRRGVGHGGPGQDVPKLAVQFQDDADETGFTPIRWVPVQHI 273 A+ G+ VA + + E ++L +V Y E+ YE+ D DD + + T P + V+ L ++ QKG+ V AV+P+TTSFYLGTI + P+ PG + ++ V+F DDAD+TG TP R +P +++ Sbjct: 370 AKNGEQVAVRDDREEPGAWILARVIKYVPETHQYELKDDDDKEGIGILTAPRSLVIRLEDSTKG----VQKGERVLAVFPDTTSFYLGTIHRVPK-----PAPGAE-RRIEVKFNDDADDTGRTPGRPLPARYV 493 The following BLAST results are available for this feature:
BLAST of NO29G00240 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO29G00240 ID=NO29G00240|Name=NO29G00240|organism=Nannochloropsis oceanica|type=gene|length=3102bpback to top protein sequence of NO29G00240.1 >NO29G00240.1-protein ID=NO29G00240.1-protein|Name=NO29G00240.1|organism=Nannochloropsis oceanica|type=polypeptide|length=277bpback to top protein sequence of NO29G00240.2 >NO29G00240.2-protein ID=NO29G00240.2-protein|Name=NO29G00240.2|organism=Nannochloropsis oceanica|type=polypeptide|length=243bpback to top Synonyms
Publications
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