NO29G00220, NO29G00220 (gene) Nannochloropsis oceanica

Overview
NameNO29G00220
Unique NameNO29G00220
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1935
Alignment locationchr29:84928..86862 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr29genomechr29:84928..86862 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO29G00220 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR079ncniR079Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR081ngnoR081Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO29G00220.1NO29G00220.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|611523gene_10442Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO29G00220.1NO29G00220.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO29G00220 ID=NO29G00220|Name=NO29G00220|organism=Nannochloropsis oceanica|type=gene|length=1935bp
ATGCGGGTTCGAACTTGTCAAAAGGGCGGCCTGGTCCAGCTCCTGGCAGT
CCTCTTCTTAATAGCCCCTCTCGCGGACGCTGGCCCCCTGACTGATTTTT
TGGATAGAGCTCGTGCTCGATCCGCCACGCCGTCGCCGACCTTAGCCGCG
ACACCAGCTCCGACTGAAGTCAAAAAGACGCCTGCACCAACTTCTGCTCC
TACGAAGAGTCTCACGAAAGCGCCGACGAGGAAGCCTCTCTTCAACCCCA
AGGCAACCCCTGTGCCCGAGCTCCCAGCTAACGATGATGACGAGGAGGAT
GTCTGGGATGGAGAATATGCCGATGGAGGTAACGACCCAAGAGACGACGA
TGACGAGGAGGAGGCGACCGACGACGGCTGGGACGACGACGATGAGGGTC
TTTGGGATGACTTTACGTGGCCCCCTACTGCCGTTGCCCCTGCGACTGAC
GCGATGAAGGACAGTGTGGCGGCTCCCACGGACCTCCCAGCGGACGATGA
TGAAGAGGAGGATGACTGGGATGAGGACGAGTACGGTTGGAGTGACGACG
ATGACGAGGAGGAGGCGACCGATGACGGCTGGGATGACGACGACGAGGGT
CTTTGGGATGACTTCACGTGGCCCCCCACTGCCGTTGCTCCTGCGACTGA
CGCGATGAAGGACAGTGTGGTGGCTCTGGATACTGCGACGCCTATCCCCA
CGGAACCTCCTTTCGAACTCTCTGTGATGCCTGCTGACGATGACTTTCGA
GTGGAGGGTGAATACGAGGGGGAGGATGACGACTTGGAGAATGATGAAGA
CCTTGAAGACATGATGGAAGACGACCCTGAGGTAGCGGAGGAGAAAGAGT
TTGATATTGCCAGCAGTGAGGTGGAGGAAGACGATGACCTGGAGGAAGGC
ATAGAGCCCCTTGACGAAAGTGAGGAGGCCACAGTCGGCCCGGTCGAAGC
TGGGGAAGCTGTCACACCTGCGGAGAAGGGGGATGCCGCTGCTATCGACG
ACGACGAGGAGGCAAACGATGATGACGTCGCGGCCGAACCTATGGAGGAA
AATGCGGTGGCGGCGGACGACGACGAGGAGGCAAACGATGATGACGTCGC
AGCCGAAACTATGGAGGAAAATGCGGTGGCGGCGGACGACGACGAGGAGG
AGGAGAAGGAGGAGCACAATGACGATGACGAGGAGCACGACGACGACGAC
GAGGAGCACGACAACGATGACGAGGAACAAGTTGACGACGTGGACGATGA
GGAGGAGTTGGAGGTAATGGGCAAGGAGGATGACGCCGTCATTTCCGAAT
TTCCGGTTGAAGCTGCGGTTGAAGTGCCCGAAGAGGAGACGACGGATGGC
GACCGGACTGATGGCACCGTTGCTGACCCCGCCGAGGTTGTTGATGCGAA
GGCCACGCGAGCCCCTACCGCTGCGCGCTCGCCCGCGCCCACCAACGGTG
TGCCCATAGTCGACCCGGACGGGGTAGGGACGGGACTCCCTCCTGATGCC
GTTGCAGAGGGGGGGCTTCCCGGGGCACCCGGAGGTGGCTTAGGCCAGGG
GGGTGGAAACCTGCCCGGAGTGCCTAACCTGGGAGGGGTGGGTAACGGTC
CTATCGGGGATATGATTACCGGTGGGGCGAAGGACGGGACAGATGCCACG
CCCATGACGGGAGAGGAGGGGAGCGTCACAAACCCCACGAGCGGAGTCGA
CCCGACAGACACGACAAGCGGCGGGGGCAAGACCACCACCACGAACATCA
CCCCTCCAACTGCCCCGCCGACGGAGAAAGAAGACAAGATCCTGCCGATT
GACGATGCGCTGCCGGCGGACGGGACGCTCAACGAGCAGGCGGTGATGCA
CTCGGGTGCGGCAATGATCCATACGTCCGTGTTGGCGGTGCTGGCGACCG
CAGCCATGGCGGCCGTGCCTCTGCTAGCATTTTAA
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protein sequence of NO29G00220.1

>NO29G00220.1-protein ID=NO29G00220.1-protein|Name=NO29G00220.1|organism=Nannochloropsis oceanica|type=polypeptide|length=645bp
MRVRTCQKGGLVQLLAVLFLIAPLADAGPLTDFLDRARARSATPSPTLAA
TPAPTEVKKTPAPTSAPTKSLTKAPTRKPLFNPKATPVPELPANDDDEED
VWDGEYADGGNDPRDDDDEEEATDDGWDDDDEGLWDDFTWPPTAVAPATD
AMKDSVAAPTDLPADDDEEEDDWDEDEYGWSDDDDEEEATDDGWDDDDEG
LWDDFTWPPTAVAPATDAMKDSVVALDTATPIPTEPPFELSVMPADDDFR
VEGEYEGEDDDLENDEDLEDMMEDDPEVAEEKEFDIASSEVEEDDDLEEG
IEPLDESEEATVGPVEAGEAVTPAEKGDAAAIDDDEEANDDDVAAEPMEE
NAVAADDDEEANDDDVAAETMEENAVAADDDEEEEKEEHNDDDEEHDDDD
EEHDNDDEEQVDDVDDEEELEVMGKEDDAVISEFPVEAAVEVPEEETTDG
DRTDGTVADPAEVVDAKATRAPTAARSPAPTNGVPIVDPDGVGTGLPPDA
VAEGGLPGAPGGGLGQGGGNLPGVPNLGGVGNGPIGDMITGGAKDGTDAT
PMTGEEGSVTNPTSGVDPTDTTSGGGKTTTTNITPPTAPPTEKEDKILPI
DDALPADGTLNEQAVMHSGAAMIHTSVLAVLATAAMAAVPLLAF*
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Synonyms
Publications