NO29G00210, NO29G00210 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO29G00210 vs. NCBI_GenBank
Match: XP_005853398.1 (hypothetical protein NGA_0497210 [Nannochloropsis gaditana CCMP526] >EKU22960.1 hypothetical protein NGA_0497210 [Nannochloropsis gaditana CCMP526] >EWM21226.1 hypothetical protein Naga_100507g1 [Nannochloropsis gaditana]) HSP 1 Score: 169.9 bits (429), Expect = 1.500e-38 Identity = 86/126 (68.25%), Postives = 94/126 (74.60%), Query Frame = 0 Query: 35 QLTEKGGRYESSMRGDGVDASCCDWPPQDYESSVLHVVKEEDKEGDEGDRGGK-RRVVEEKVVLEYEGRRLTLRTLLEEDELAPLFDGAYWPGTMVWPVSLWTAEYIHHTYRKHMRGARVVELGCG 160 Q E GGR S R CDWPPQ YES V+ V+KEE +G G G K VVEEKVV+EYE RRLT RTLLEEDELAPLFDGAYWPGTMVWPVSLWTAEY+H TYR+ ++GARVVELGCG Sbjct: 27 QAWEGGGREGHSSRPP--QEVTCDWPPQGYESDVIRVIKEEGMDGGAGRDGEKGAMVVEEKVVVEYERRRLTFRTLLEEDELAPLFDGAYWPGTMVWPVSLWTAEYLHRTYRRELKGARVVELGCG 150
BLAST of NO29G00210 vs. NCBI_GenBank
Match: XP_012200786.1 (hypothetical protein SPRG_06577 [Saprolegnia parasitica CBS 223.65] >KDO28338.1 hypothetical protein SPRG_06577 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 145.6 bits (366), Expect = 3.000e-31 Identity = 89/240 (37.08%), Postives = 125/240 (52.08%), Query Frame = 0 Query: 89 RVVEEKVVLEY-EGRRLTLRTLLEEDELAPLFDGAYWPGTMVWPVSLWTAEYIHHTYRKHMRGARVVELGCGCGVPGMLCHLMGAASVALTEQPELMRIIRQNIKENFGVEGGREKRREGGTATNGKEEKNGACRGEEAHADLSPPSSPLMSIPPSSTSSLFAAPLWWSREAALDLLEQNEWPAVDFAVCCDCIYAPFWGESYKALLACFEEFSARSPSTCIGIISVERRNGDGVDDFLA 328 +V EE++V++ EG RL + LL+E ELAPLF GA W GT+VW + + Y+ + +R RVVELG G GVPGM+ ++GA V LTEQPEL+ ++R NI+ NF S S++ AA L W EA + + A D +CCDCIY P +G+S++AL + A +P+ C ++SVERR+GDG+D FLA Sbjct: 12 KVCEERIVIDVDEGHRLDISLLLDEQELAPLFCGAAWAGTLVWEAAELISNYVLN--ELDVRTLRVVELGAGLGVPGMVAGILGAPHVVLTEQPELVPLLRTNIRRNF------------------------------------------------SASNVEAAVLSWGTEATTAFCAR--YGAFDLVLCCDCIYEPLYGQSWRALALSMDVLCAANPA-CRVLVSVERRHGDGIDAFLA 198
BLAST of NO29G00210 vs. NCBI_GenBank
Match: OQR85008.1 (hypothetical protein ACHHYP_12443 [Achlya hypogyna]) HSP 1 Score: 143.7 bits (361), Expect = 1.100e-30 Identity = 85/239 (35.56%), Postives = 123/239 (51.46%), Query Frame = 0 Query: 89 RVVEEKVVLEYEGRRLTLRTLLEEDELAPLFDGAYWPGTMVWPVSLWTAEYIHHTYRKHMRGARVVELGCGCGVPGMLCHLMGAASVALTEQPELMRIIRQNIKENFGVEGGREKRREGGTATNGKEEKNGACRGEEAHADLSPPSSPLMSIPPSSTSSLFAAPLWWSREAALDLLEQNEWPAVDFAVCCDCIYAPFWGESYKALLACFEEFSARSPSTCIGIISVERRNGDGVDDFLA 328 +V EE++V+ E + L + LL+E+ELAPLF GA W GT+VW + + Y+ + + RV+ELG G GVPGM+ L+GA V LTEQPEL+ ++R NI+ NF + +S+ AA L W REA + + D + CDC+Y P +GES++AL +E A +P+ C ++SVERR+GDG+D FLA Sbjct: 14 KVCEERIVIHVEDKSLDISLLLDEEELAPLFCGAAWAGTLVWEAAELLSNYMLN--ELDVSSLRVLELGAGLGVPGMVAGLLGAQHVVLTEQPELVPLLRTNIRRNF-----------------------------------------------AGANSVAAAELSWGREATRAFVATH--GTFDVLLSCDCVYEPLYGESWRALAHTMDELCAANPA-CRALVSVERRHGDGIDRFLA 200
BLAST of NO29G00210 vs. NCBI_GenBank
Match: XP_008620151.1 (hypothetical protein SDRG_15747 [Saprolegnia diclina VS20] >EQC26402.1 hypothetical protein SDRG_15747 [Saprolegnia diclina VS20]) HSP 1 Score: 141.0 bits (354), Expect = 7.300e-30 Identity = 86/240 (35.83%), Postives = 125/240 (52.08%), Query Frame = 0 Query: 89 RVVEEKVVLEY-EGRRLTLRTLLEEDELAPLFDGAYWPGTMVWPVSLWTAEYIHHTYRKHMRGARVVELGCGCGVPGMLCHLMGAASVALTEQPELMRIIRQNIKENFGVEGGREKRREGGTATNGKEEKNGACRGEEAHADLSPPSSPLMSIPPSSTSSLFAAPLWWSREAALDLLEQNEWPAVDFAVCCDCIYAPFWGESYKALLACFEEFSARSPSTCIGIISVERRNGDGVDDFLA 328 +V EE++V++ E RL + LL+E ELAPLF GA W GT+VW + + Y+ + +R RV+ELG G GVPGM+ ++GA V LTEQPEL+ ++R NI+ NF +S+S++ AA L W A ++ A D +CCDCIY P +G+S++AL + A +P+ C ++SVERR+GDG+D FLA Sbjct: 12 KVCEERIVIDVDESHRLDISLLLDEHELAPLFCGAAWAGTLVWEAAELISNYVLN--ELDVRNLRVLELGAGLGVPGMVAGILGAPHVVLTEQPELVPLLRTNIRRNFA----------------------------------------------ASSSNVEAAVLSWGTAATTAFCA--KYGAFDVVLCCDCIYEPLYGQSWRALALSMDVLCASNPA-CRVLMSVERRHGDGIDSFLA 200
BLAST of NO29G00210 vs. NCBI_GenBank
Match: CCA27477.1 (conserved hypothetical protein [Albugo laibachii Nc14]) HSP 1 Score: 138.3 bits (347), Expect = 4.700e-29 Identity = 82/228 (35.96%), Postives = 116/228 (50.88%), Query Frame = 0 Query: 103 RLTLRTLLEEDELAPLFDGAYWPGTMVWPVSLWTAEYIHHTY----RKHMRGARVVELGCGCGVPGMLCHLMGAASVALTEQPELMRIIRQNIKENFGVEGGREKRREGGTATNGKEEKNGACRGEEAHADLSPPSSPLMSIPPSSTSSLFAAPLWWSREAALDLLEQNEWPAVDFAVCCDCIYAPFWGESYKALLACFEEFSARSPSTCIGIISVERRNGDGVDDFL 327 +LTL LL+E+ELAPLF GA W GT+VW +++ A Y H Y R +R RV+ELG G GVPGM + GA SV LTEQ +L+ ++ +N+K N G A N K+E+ ++ L W +E+ + L + +DF + CDCI+ P +G+S+KAL + +P C+ +SVERR DGVD FL Sbjct: 41 KLTLSLLLKEEELAPLFSGAAWAGTVVWDAAIYLARYFLHHYGAILRDKLRSIRVLELGAGIGVPGMAARIAGAESVILTEQEDLVDLMHRNLKGN--------ANALGLDAANDKKEQ-----------------------------AIVGRVLSWGKESIHNYLMTYQDEQIDFVLSCDCIFVPLYGDSWKALAITMQAICETNPQCCV-FLSVERRKEDGVDSFL 230
BLAST of NO29G00210 vs. NCBI_GenBank
Match: CCI39613.1 (unnamed protein product [Albugo candida]) HSP 1 Score: 138.3 bits (347), Expect = 4.700e-29 Identity = 86/239 (35.98%), Postives = 118/239 (49.37%), Query Frame = 0 Query: 92 EEKVVLEYEGRRLTLRTLLEEDELAPLFDGAYWPGTMVWPVSLWTAEYIHHTY----RKHMRGARVVELGCGCGVPGMLCHLMGAASVALTEQPELMRIIRQNIKENFGVEGGREKRREGGTATNGKEEKNGACRGEEAHADLSPPSSPLMSIPPSSTSSLFAAPLWWSREAALDLLEQNEWPAVDFAVCCDCIYAPFWGESYKALLACFEEFSARSPSTCIGIISVERRNGDGVDDFL 327 E+ VL + +LTL LL+E+ELAPLF GA W GT+VW +++ Y H Y R +R RV+ELG G GVPGM + GA SV LTEQ +L+ +I +NIK N G N K+E+ ++ L W +E+ L+ +DF + CDCI+ P +G+S+KAL +E +P C +SVERR DGVD FL Sbjct: 21 EKAEVLVFGTTKLTLSLLLKEEELAPLFSGAAWAGTVVWDAAIYLTRYFLHHYGTELRNALRSTRVLELGAGIGVPGMAARIAGADSVILTEQEDLVDLIHRNIKSNANALGLH--------PANDKKEQ-----------------------------AIVGRVLSWGKESINTYLKTYHDEQIDFVLSCDCIFEPLYGDSWKALAITMQEICELNPE-CSVFLSVERRKEDGVDRFL 221
BLAST of NO29G00210 vs. NCBI_GenBank
Match: XP_008864896.1 (hypothetical protein H310_02966 [Aphanomyces invadans] >ETW06821.1 hypothetical protein H310_02966 [Aphanomyces invadans]) HSP 1 Score: 133.3 bits (334), Expect = 1.500e-27 Identity = 83/238 (34.87%), Postives = 122/238 (51.26%), Query Frame = 0 Query: 89 RVVEEKVVLEYEGRRLTLRTLLEEDELAPLFDGAYWPGTMVWPVSLWTAEYIHHTYRKHMRGARVVELGCGCGVPGMLCHLMGAASVALTEQPELMRIIRQNIKENFGVEGGREKRREGGTATNGKEEKNGACRGEEAHADLSPPSSPLMSIPPSSTSSLFAAPLWWSREAALDLLEQNEWPAVDFAVCCDCIYAPFWGESYKALLACFEEFSARSPSTCIGIISVERRNGDGVDDFL 327 RV EE++ + ++L L +L+EDELAPLF GA W GT+VW ++ A ++ + + + RV+ELG G GVPGM+ ++GA V LTEQPEL+ ++R NI+ NF NG + A+ L W +AA + E A D + CDCIY P +GES++AL + R+P+ CI +++VERR+ DG+D FL Sbjct: 13 RVCEERICIGVRDKQLDLTLVLDEDELAPLFAGAAWAGTLVWDAAVVLANHVLNDVQ--VDSLRVLELGAGIGVPGMVASILGAKHVVLTEQPELVPLLRTNIRRNF---------------------PNG---------------------------GVTASALSWGVDAANAFCD--EHGAFDIVLSCDCIYQPLYGESWRALALTMDVLCKRNPA-CIVLVAVERRHEDGIDAFL 197
BLAST of NO29G00210 vs. NCBI_GenBank
Match: OQS07676.1 (hypothetical protein THRCLA_00335 [Thraustotheca clavata]) HSP 1 Score: 131.7 bits (330), Expect = 4.400e-27 Identity = 82/252 (32.54%), Postives = 125/252 (49.60%), Query Frame = 0 Query: 89 RVVEEKVVLEYEGRRLTLRTLLEEDELAPLFDGAYWPGTMVWPVSLWTAEYIHHTYRKHMRGARVVELGCGCGVPGMLCHLMGAASVALTEQPELMRIIRQNIKENFGVEGGREKRREGGTATNGKEEKNGACRGEEAHADLSPPSSPLMSIPPSSTSSLFAAPLWWSREAALDLLEQNEWPAVDFAVCCDCIYAPFWGESYKALLACFEEFSARSPSTCIGIISVERRNGDGVDDFLA--CARATMEVKQV 339 +V EE++V++ E + L + LL+E ELAPLF GA W GT+VW ++ + Y+ + ++ RV+ELG G GVPGM+ L+GA V +TEQPEL+ +IR NI+ N +S SS+ A L W REA + E D + CDC+Y P +GES++ L + +P+ C + SVERR+ DG++ FL+ T++ +Q+ Sbjct: 12 KVCEERIVVDVEDKSLDITLLLDEHELAPLFCGAAWAGTLVWEAAVALSNYVLN--EVDLKPLRVLELGAGLGVPGMVAGLLGAKRVVITEQPELVPLIRTNIRRNI-----------------------------------------------ASLSSVEAKILSWGREATTSFCD--EMGLFDLVLSCDCVYEPLYGESWRDLAQTMDVLCQHNPN-CKILASVERRHADGINKFLSYIATDTTLKARQL 211
BLAST of NO29G00210 vs. NCBI_GenBank
Match: XP_009834848.1 (hypothetical protein H257_10098 [Aphanomyces astaci] >ETV75717.1 hypothetical protein H257_10098 [Aphanomyces astaci]) HSP 1 Score: 130.6 bits (327), Expect = 9.900e-27 Identity = 82/239 (34.31%), Postives = 116/239 (48.54%), Query Frame = 0 Query: 89 RVVEEKVVLEYEGRRLTLRTLLEEDELAPLFDGAYWPGTMVWPVSLWTAEYIHHTYRKHMRGARVVELGCGCGVPGMLCHLMGAASVALTEQPELMRIIRQNIKENFGVEGGREKRREGGTATNGKEEKNGACRGEEAHADLSPPSSPLMSIPPSSTSSLFAAPLWWSREAALDLLEQNEWPAVDFAVCCDCIYAPFWGESYKALLACFEEFSARSPSTCIGIISVERRNGDGVDDFLA 328 RV EE++ + + L L LL+EDELAPLF GA W GT+VW ++ A ++ + R + RV+ELG G GVPGM+ ++GA V +TEQPEL+ ++R NI+ NF G G A N C + + A D + CDCIY P +GES+ AL + R+P+ C+ ++SVERR+ DG+D FLA Sbjct: 15 RVCEERIRIGVRDKELDLTLLLDEDELAPLFAGAAWAGTLVWDAAVVLANHLLNDVR--LESLRVLELGAGIGVPGMVASILGAKHVVITEQPELVPLLRTNIRRNFPNGGVTATALSWGVAAT-----NAFC---------------------------------------------DSFGAFDVVLSCDCIYQPLYGESWCALAVTMDVLCKRNPA-CVVLVSVERRHEDGIDAFLA 200
BLAST of NO29G00210 vs. NCBI_GenBank
Match: XP_002902470.1 (conserved hypothetical protein [Phytophthora infestans T30-4] >EEY56396.1 conserved hypothetical protein [Phytophthora infestans T30-4]) HSP 1 Score: 128.6 bits (322), Expect = 3.800e-26 Identity = 85/241 (35.27%), Postives = 114/241 (47.30%), Query Frame = 0 Query: 91 VEEKVVLEYEGRRLTLRTLLEEDELAPLFDGAYWPGTMVWPVSLWTAEYIHHTYRKHM----RGARVVELGCGCGVPGMLCHLMGAASVALTEQPELMRIIRQNIKENFGVEGGREKRREGGTATNGKEEKNGACRGEEAHADLSPPSSPLMSIPPSSTSSLFAAPLWWSREAALDLLEQNEWPAVDFAVCCDCIYAPFWGESYKALLACFEEFSARSPSTCIGIISVERRNGDGVDDFLA 328 VEE + G+ L L L++ DELAPLF GA W GT++W ++ A YR+ + RV+ELG G GVPGM + GA V LTEQ EL+R++ N+ N E NG+E+ G+E + A PL W + + L Q VD + CDCIY P +G S++AL E P CI ++ VERRN DG+D FLA Sbjct: 15 VEEFTRVRVNGKDLNLTLLMQADELAPLFSGAAWAGTLLWDAAVHLARRFLTDYRQQLEDPSNSLRVIELGAGIGVPGMAARVAGAKHVILTEQDELLRLMHVNLAAN----------AEVLNLPNGEED------GDE-------------------KGGIVARPLSWGVQQTNEYLAQYPDEKVDVVLSCDCIYEPLYGTSWRALAQTMELLCLAYPK-CIVLMGVERRNQDGIDKFLA 219 The following BLAST results are available for this feature:
BLAST of NO29G00210 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20 Position : 0 Zoom : x 1
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO29G00210 ID=NO29G00210|Name=NO29G00210|organism=Nannochloropsis oceanica|type=gene|length=4863bpback to top protein sequence of NO29G00210.1 >NO29G00210.1-protein ID=NO29G00210.1-protein|Name=NO29G00210.1|organism=Nannochloropsis oceanica|type=polypeptide|length=357bpback to top Synonyms
Publications
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