NO29G00190, NO29G00190 (gene) Nannochloropsis oceanica
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Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO29G00190 vs. NCBI_GenBank
Match: XP_005853399.1 (px domain containing protein [Nannochloropsis gaditana CCMP526] >EKU22961.1 px domain containing protein [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 147.1 bits (370), Expect = 4.500e-32 Identity = 66/87 (75.86%), Postives = 74/87 (85.06%), Query Frame = 0
Query: 70 KEHRRRFKDFDKLDEKIRSYFWGHHLASSLPALPPKFFKVLSSHNSPSFLEERRMALDAYVHKLLTFPHVRRNPDWQAFVRGEEGFR 157
KEHR RF+DFDKLD KIRSYFWGHHLASSLP LPPK+ K L++H SPSFLEERR ALDAY+ +L FP+V+RNPDWQAFV GE G R
Sbjct: 220 KEHRFRFRDFDKLDVKIRSYFWGHHLASSLPRLPPKYLKALTAHTSPSFLEERRAALDAYMQRLQNFPYVQRNPDWQAFVLGEPGLR 306
BLAST of NO29G00190 vs. NCBI_GenBank
Match: EWM21227.1 (px domain containing protein [Nannochloropsis gaditana]) HSP 1 Score: 147.1 bits (370), Expect = 4.500e-32 Identity = 66/87 (75.86%), Postives = 74/87 (85.06%), Query Frame = 0
Query: 70 KEHRRRFKDFDKLDEKIRSYFWGHHLASSLPALPPKFFKVLSSHNSPSFLEERRMALDAYVHKLLTFPHVRRNPDWQAFVRGEEGFR 157
KEHR RF+DFDKLD KIRSYFWGHHLASSLP LPPK+ K L++H SPSFLEERR ALDAY+ +L FP+V+RNPDWQAFV GE G R
Sbjct: 225 KEHRFRFRDFDKLDVKIRSYFWGHHLASSLPRLPPKYLKALTAHTSPSFLEERRAALDAYMQRLQNFPYVQRNPDWQAFVLGEPGLR 311
BLAST of NO29G00190 vs. NCBI_GenBank
Match: XP_005856197.1 (px domain containing protein, partial [Nannochloropsis gaditana CCMP526] >EKU20177.1 px domain containing protein, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 117.5 bits (293), Expect = 3.800e-23 Identity = 53/71 (74.65%), Postives = 61/71 (85.92%), Query Frame = 0
Query: 70 KEHRRRFKDFDKLDEKIRSYFWGHHLASSLPALPPKFFKVLSSHNSPSFLEERRMALDAYVHKLLTFPHVR 141
KEHR RF+DFDKLD KIRSYFWGHHLASSLP LPPK+ K L++H SPSFLEERR ALDAY+ +L FP+V+
Sbjct: 220 KEHRFRFRDFDKLDVKIRSYFWGHHLASSLPRLPPKYLKALTAHTSPSFLEERRAALDAYMQRLQNFPYVQ 290
BLAST of NO29G00190 vs. NCBI_GenBank
Match: EWM24547.1 (hypothetical protein Naga_100260g2 [Nannochloropsis gaditana]) HSP 1 Score: 75.1 bits (183), Expect = 2.200e-10 Identity = 34/75 (45.33%), Postives = 45/75 (60.00%), Query Frame = 0
Query: 74 RRFKDFDKLDEKIRSYFWGHHLASSLPALPPKFFKVLSSHNSPSFLEERRMALDAYVHKLLTFPHVRRNPDWQAF 149
RR++DFDKLD +RS F G HL SSLP+LP K + + P F+E RR L+ Y+ +L+ P NPD F
Sbjct: 247 RRYRDFDKLDRLVRSAFAGSHLLSSLPSLPIKVLNPFADQSDPLFIEHRRQELEVYLQRLIRMPKASHNPDLLRF 321
BLAST of NO29G00190 vs. NCBI_GenBank
Match: XP_009038266.1 (hypothetical protein AURANDRAFT_71905 [Aureococcus anophagefferens] >EGB07029.1 hypothetical protein AURANDRAFT_71905 [Aureococcus anophagefferens]) HSP 1 Score: 74.3 bits (181), Expect = 3.700e-10 Identity = 38/84 (45.24%), Postives = 46/84 (54.76%), Query Frame = 0
Query: 66 DVGVKEHRRRFKDFDKLDEKIRSYFWGHHLASSLPALPPKFFKVLSSHNSPSFLEERRMALDAYVHKLLTFPHVRRNPDWQAFV 150
+V RRF+DF LDE I GHH+ +S+P LP K K+ HN +FLE RR LD YV KL+ PHV P FV
Sbjct: 155 EVATTRVHRRFRDFADLDEAITGALAGHHVRNSVPRLPLKKLKLFQDHNDAAFLEARRRDLDGYVAKLVHVPHVWATPPAAPFV 238
BLAST of NO29G00190 vs. NCBI_GenBank
Match: GBG26089.1 (Hypothetical Protein FCC1311_023092 [Aurantiochytrium sp. FCC1311]) HSP 1 Score: 74.3 bits (181), Expect = 3.700e-10 Identity = 35/77 (45.45%), Postives = 49/77 (63.64%), Query Frame = 0
Query: 73 RRRFKDFDKLDEKIRSYFWGHHLASSLPALPPKFFKVLSSHNSPSFLEERRMALDAYVHKLLTFPHVRRNPDWQAFV 150
++RF +F +LD +RS F HL SSLP LPP+ K L+ H + +F+ +RRMAL AY+ KL P + NPD F+
Sbjct: 200 QKRFSEFVELDRLVRSAFATSHLLSSLPTLPPRQIKALADHTNQAFIVKRRMALSAYLRKLAKMPRIPCNPDVLEFL 276
BLAST of NO29G00190 vs. NCBI_GenBank
Match: CBN76238.1 (PX domain containing protein (Partial), partial [Ectocarpus siliculosus]) HSP 1 Score: 72.4 bits (176), Expect = 1.400e-9 Identity = 36/76 (47.37%), Postives = 47/76 (61.84%), Query Frame = 0
Query: 74 RRFKDFDKLDEKIRSYFWGHHLASSLPALPPKFFKVLSSHNSPSFLEERRMALDAYVHKLLTFPHVRRNPDWQAFV 150
RRF+DF L E++ S GHHL SSLP P K K+ ++H SF+EERR AL+ Y+ LL PHV +AF+
Sbjct: 86 RRFRDFYALQEQVESLMKGHHLRSSLPRFPGKKSKLWTNHGDLSFVEERRKALEQYLKTLLQLPHVSTLDSTRAFL 161
BLAST of NO29G00190 vs. NCBI_GenBank
Match: XP_005853793.1 (px domain containing protein [Nannochloropsis gaditana CCMP526] >EKU22566.1 px domain containing protein [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 69.7 bits (169), Expect = 9.100e-9 Identity = 34/76 (44.74%), Postives = 49/76 (64.47%), Query Frame = 0
Query: 74 RRFKDFDKLDEKIRSYFWGHHLASSLPALPPKFFKVLSSHNSPSFLEERRMALDAYVHKLLTFPHVRRNPDWQAFV 150
RR+++F L E++ + F GHHL SSLP LP + K+L HN +F+EERR+ L+ + KLL+ PHV Q F+
Sbjct: 151 RRYREFVCLFEQVHAAFKGHHLRSSLPELPGRQLKLLVDHNDTAFVEERRLLLETALGKLLSVPHVGAMVPVQVFL 226
BLAST of NO29G00190 vs. NCBI_GenBank
Match: EWM22419.1 (px domain containing protein [Nannochloropsis gaditana]) HSP 1 Score: 69.7 bits (169), Expect = 9.100e-9 Identity = 34/76 (44.74%), Postives = 49/76 (64.47%), Query Frame = 0
Query: 74 RRFKDFDKLDEKIRSYFWGHHLASSLPALPPKFFKVLSSHNSPSFLEERRMALDAYVHKLLTFPHVRRNPDWQAFV 150
RR+++F L E++ + F GHHL SSLP LP + K+L HN +F+EERR+ L+ + KLL+ PHV Q F+
Sbjct: 151 RRYREFVCLFEQVHAAFKGHHLRSSLPELPGRQLKLLVDHNDTAFVEERRLLLETALGKLLSVPHVGAMVPVQVFL 226
BLAST of NO29G00190 vs. NCBI_GenBank
Match: GBG33055.1 (Sorting nexin-2 [Aurantiochytrium sp. FCC1311]) HSP 1 Score: 68.9 bits (167), Expect = 1.600e-8 Identity = 34/76 (44.74%), Postives = 46/76 (60.53%), Query Frame = 0
Query: 74 RRFKDFDKLDEKIRSYFWGHHLASSLPALPPKFFKVLSSHNSPSFLEERRMALDAYVHKLLTFPHVRRNPDWQAFV 150
RRF+DF +IRS F+G H+ SS+P PPK K+L H FLE RR L+ ++ + L P V NPD +AF+
Sbjct: 152 RRFRDFRFAYSQIRSAFYGTHMLSSVPKHPPKHNKLLQDHLRTEFLETRRQDLENWLRRTLLVPRVAVNPDMEAFL 227 The following BLAST results are available for this feature:
BLAST of NO29G00190 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 10
Relationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO29G00190 ID=NO29G00190|Name=NO29G00190|organism=Nannochloropsis oceanica|type=gene|length=790bpback to top protein sequence of NO29G00190.1 >NO29G00190.1-protein ID=NO29G00190.1-protein|Name=NO29G00190.1|organism=Nannochloropsis oceanica|type=polypeptide|length=157bpback to top Synonyms
Publications
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