NO29G00130, NO29G00130 (gene) Nannochloropsis oceanica

Overview
NameNO29G00130
Unique NameNO29G00130
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length5022
Alignment locationchr29:50360..55381 +

Link to JBrowse

Properties
Property NameValue
DescriptionAlpha/beta hydrolase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr29genomechr29:50360..55381 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR029058AB_hydrolase
IPR013094AB_hydrolase_3
Homology
BLAST of NO29G00130 vs. NCBI_GenBank
Match: WP_007416780.1 (alpha/beta hydrolase [Pedosphaera parvula] >EEF59198.1 alpha/beta hydrolase [Pedosphaera parvula Ellin514])

HSP 1 Score: 172.6 bits (436), Expect = 3.800e-39
Identity = 117/320 (36.56%), Postives = 159/320 (49.69%), Query Frame = 0
Query:  245 SSILPEGAIPLWKAGQVPLAKGRRAKDTPLLIPFYPDEAKWAGLSVVIMPGGGYRFLSMEKEGREVARWLCDEEGIAAFVLQYRVGPDGYHHPTQLLDGRRSVKKARELVRQHYRRRAGGGERELLGGAAXXXXXXXXXXXXXXXXXXXXXXXSAGGHLSASVLVHPEEDEETRAEHVKDATEGYSARPDFGILVYPVISMDDKITHEKSKAFLL-----PFPTANLTTYYSIEKQVPPPXXXXXXXXXXXXXXLYHSEEDKTVSIENSIFLAAALRNAGLDHDLCYFDKGKHGMGLGVK--NGVR--HPWTRLALAFLR 556
            S   P  + PLW+ G  P A G   KD P L PF+P   K  G ++V+ PGGGY  L+   EG++ A WL D +G+ AFVL+YR+G  GYHHP +L D    V +A  LVR H        +R  + G+                        SAGGHL+A+++ H +  +        DA E  S+RPD GIL YPVI+M +K TH  SK  LL     P     L+    + K+ PP               L+H+ EDK V +EN++  A ALR AG+  DL  ++KG HG  LG +  N     HPWT   + +L+
Sbjct:   17 SQAQPTNSFPLWEDG-APGALGTADKDIPTLTPFFPSPDKATGAAMVVCPGGGYGNLA-PYEGKDYALWLKD-QGVTAFVLKYRLGSAGYHHPVELQD----VSRAIRLVRSHAAEWKLDPKRVGIIGS------------------------SAGGHLAATLMTHFDGGKSDST----DAVEKESSRPDLGILCYPVITMGEK-THAGSKMNLLGKDPSPELVKELSNECHVTKETPP-------------CFLFHTVEDKAVPVENALMFATALREAGVPFDLHIYEKGAHGTALGTRAYNSATKLHPWTSDCVYWLK 287          
BLAST of NO29G00130 vs. NCBI_GenBank
Match: SDL43416.1 (Acetyl esterase/lipase [Catalinimonas alkaloidigena])

HSP 1 Score: 163.7 bits (413), Expect = 1.800e-36
Identity = 112/333 (33.63%), Postives = 161/333 (48.35%), Query Frame = 0
Query:  249 PEGAIPLWKAGQVPLAKGRRAKDTPLLIPFYPDEAKWAGLSVVIMPGGGYRFLSMEKEGREVARWLCDEEGIAAFVLQYRVGPD---GYHHPTQLLDGRRSVKKARELVRQHY--RRRAGGGERELLGGAAXXXXXXXXXXXXXXXXXXXXXXXSAGGHLSASVLVHPEEDEETRAEHVKDATEGYSARPDFGILVYPVISMDDKITHEKSKAFLL-PFPTANLTTYYSIEKQV---PPPXXXXXXXXXXXXXXLYHSEEDKTVSIENSIFLAAALRNAGLDHDLCYFDKGKHGMGLG----------VKNGVRHPWTRLALAFLRREHLLRE 563
            P   + LW  G  P AKG  AKD P L  F P   +  G +VV+ PGGGY  L+MEKEG  VA WL +  G+AAFVL+YR+G D   GY HP  L D +R+++  R   +++    +R G     ++G                          SAGGHL+A+   H +          KD  E  S+RPDF +L+YPVI+++   TH  S+ +LL   P A+L    S E QV    PP              L H+ +D++V  +NS++   AL+ AG+  +L  +D G HG G+           + + + H WTR    +L+ +  L E
Sbjct:   29 PHQEVMLWPDG-APGAKGYEAKDQPNLTVFLPPADRATGAAVVVCPGGGYHHLAMEKEGFHVAEWL-NSLGVAAFVLKYRLGSDEAGGYRHPAMLQDAQRAIRTVRRRAKEYSIDPKRVG-----IMG-------------------------FSAGGHLAATAGTHYDAGN----ADAKDRIERLSSRPDFMVLIYPVITLEQSFTHAGSRHYLLGDHPEASLVHSLSNETQVDSLTPP------------AFLVHANDDQSVPPQNSVYFYLALKEAGVSAELHLYDHGGHGFGMADGASYSTGQTLNDPMLHSWTRRCADWLQHQGWLGE 313          
BLAST of NO29G00130 vs. NCBI_GenBank
Match: WP_089683608.1 (alpha/beta hydrolase [Catalinimonas alkaloidigena])

HSP 1 Score: 163.7 bits (413), Expect = 1.800e-36
Identity = 112/333 (33.63%), Postives = 161/333 (48.35%), Query Frame = 0
Query:  249 PEGAIPLWKAGQVPLAKGRRAKDTPLLIPFYPDEAKWAGLSVVIMPGGGYRFLSMEKEGREVARWLCDEEGIAAFVLQYRVGPD---GYHHPTQLLDGRRSVKKARELVRQHY--RRRAGGGERELLGGAAXXXXXXXXXXXXXXXXXXXXXXXSAGGHLSASVLVHPEEDEETRAEHVKDATEGYSARPDFGILVYPVISMDDKITHEKSKAFLL-PFPTANLTTYYSIEKQV---PPPXXXXXXXXXXXXXXLYHSEEDKTVSIENSIFLAAALRNAGLDHDLCYFDKGKHGMGLG----------VKNGVRHPWTRLALAFLRREHLLRE 563
            P   + LW  G  P AKG  AKD P L  F P   +  G +VV+ PGGGY  L+MEKEG  VA WL +  G+AAFVL+YR+G D   GY HP  L D +R+++  R   +++    +R G     ++G                          SAGGHL+A+   H +          KD  E  S+RPDF +L+YPVI+++   TH  S+ +LL   P A+L    S E QV    PP              L H+ +D++V  +NS++   AL+ AG+  +L  +D G HG G+           + + + H WTR    +L+ +  L E
Sbjct:   32 PHQEVMLWPDG-APGAKGYEAKDQPNLTVFLPPADRATGAAVVVCPGGGYHHLAMEKEGFHVAEWL-NSLGVAAFVLKYRLGSDEAGGYRHPAMLQDAQRAIRTVRRRAKEYSIDPKRVG-----IMG-------------------------FSAGGHLAATAGTHYDAGN----ADAKDRIERLSSRPDFMVLIYPVITLEQSFTHAGSRHYLLGDHPEASLVHSLSNETQVDSLTPP------------AFLVHANDDQSVPPQNSVYFYLALKEAGVSAELHLYDHGGHGFGMADGASYSTGQTLNDPMLHSWTRRCADWLQHQGWLGE 316          
BLAST of NO29G00130 vs. NCBI_GenBank
Match: SPE55329.1 (Alpha/beta hydrolase [Verrucomicrobia bacterium])

HSP 1 Score: 162.5 bits (410), Expect = 3.900e-36
Identity = 119/333 (35.74%), Postives = 160/333 (48.05%), Query Frame = 0
Query:  223 TAHFGFPLSSSSPFDFFPPSDPSSILPEGAIPLWKAGQVPLAKGRRAKDTPLLIPFYPDEAKWAGLSVVIMPGGGYRFLSMEKEGREVARWLCDEEGIAAFVLQYRVGPDGYHHPTQLLDGRRSVKKARELVRQHYRRRAGGGERELLGGAAXXXXXXXXXXXXXXXXXXXXXXXSAGGHLSASVLVHPEEDEETRAEHVKDATEGYSARPDFGILVYPVISMDDKITHEKSKAFLL-PFPTA----NLTTYYSIEKQVPPPXXXXXXXXXXXXXXLYHSEEDKTVSIENSIFLAAALRNAGLDHDLCYFDKGKHGMGLGVKNGV---RHPWT 548
            TA FG+ ++  +      P++P  + PEGA         P A G+  KD P L  +  + A   G ++VI PGGGY  L+   EG   ARWL +E+GIA  VL+YR+G  GYHHP  L D  R+V+            RA  GE +L                            SAGGHL++++L H +  + T +    DA E  S+RPD GIL Y VI+M    TH+ SK  LL   P A    NL+    + K  PP               L+H+ ED  V +EN++  A ALR AG+  DL  + KG HG+GLG +      RHPWT
Sbjct:    9 TASFGWLVALQA-----QPANPIVLWPEGA---------PGALGKADKDVPTLTAYLAEPAIATGAAMVICPGGGYGMLA-RHEGEHYARWL-NEQGIAGLVLKYRLGSSGYHHPAMLQDAARAVRLV----------RARAGEWKL------------------DRKRIGIMGSSAGGHLASTLLTHFDAGDATSS----DAIERESSRPDLGILCYAVITM-GHFTHQGSKENLLGKAPPAELVQNLSNELQVTKDTPP-------------CFLWHTYEDTVVPVENTLMFAEALRKAGVPFDLHIYQKGAHGLGLGSQEWAPDRRHPWT 279          
BLAST of NO29G00130 vs. NCBI_GenBank
Match: GBD34930.1 (Acetylxylan esterase [bacterium HR36])

HSP 1 Score: 160.6 bits (405), Expect = 1.500e-35
Identity = 107/307 (34.85%), Postives = 144/307 (46.91%), Query Frame = 0
Query:  253 IPLWKAGQVPLAKGRRAKDTPLLIPFYPDEAKWAGLSVVIMPGGGYRFLSMEKEGREVARWLCDEEGIAAFVLQYRVGPDGYHHPTQLLDGRRSVKKARELVRQHYRRRAGGGERELLGGAAXXXXXXXXXXXXXXXXXXXXXXXSAGGHLSASVLVHPEEDEETRAEHVKDATEGYSARPDFGILVYPVISMDDKITHEKSKAFLL-PFPTANLTTYYSIEKQV---PPPXXXXXXXXXXXXXXLYHSEEDKTVSIENSIFLAAALRNAGLDHDLCYFDKGKHGMGLGVKNGVRHPWTRLALAFLR 556
            IPLW   + P A   + +D P L  + P + K  G +VV+ PGGGY FL++  EG+E+A WL +E G+ AFVL+YRV P  Y HP  L D +R+++  R    Q                                         SAGGHL+AS  VH +      +    D  +  S RPDF IL YPVIS  +   H+ S+  LL P P   L  Y S+EK V    PP              L+H+ EDK V  ENS+    ALR AG+  +L  ++KG HG+GL  K+ +   W      +LR
Sbjct:   22 IPLW-PDKPPGAVSDKPEDRPTLTLYLPPKEKATGTAVVVCPGGGYGFLAVGLEGQEIAEWL-NEHGVTAFVLRYRVAP-RYRHPAPLQDVQRAIRLVRSRAAQ----------------------------WNIDPKRIGVWGFSAGGHLAASAAVHFDAGNPQSS----DPIDRLSCRPDFCILAYPVISFTEPFAHKGSRNNLLGPNPDPKLLEYLSLEKNVTAQTPP------------AFLFHTTEDKVVPAENSVAFYLALRKAGVPAELHIYEKGPHGVGLAKKDPILRTWPDHLATWLR 281          
BLAST of NO29G00130 vs. NCBI_GenBank
Match: OLC45952.1 (1,4-beta-xylanase [Acidobacteria bacterium 13_1_40CM_65_14])

HSP 1 Score: 158.7 bits (400), Expect = 5.600e-35
Identity = 112/323 (34.67%), Postives = 160/323 (49.54%), Query Frame = 0
Query:  244 PSSILPE-GAIPLWKAGQVPLAKGRRAKDTPLLIPFYPDEAKWAGLSVVIMPGGGYRFLSMEKEGREVARWLCDEEGIAAFVLQYRVGPDGYHHPTQLLDGRRSVKKARELVRQHYRRRAGGGERELLGGAAXXXXXXXXXXXXXXXXXXXXXXXSAGGHLSASVLVHPEEDEETRAEHVKDATEGYSARPDFGILVYPVISMDDKITHEKSKAFLL-PFPTANLTTYYSIEKQV---PPPXXXXXXXXXXXXXXLYHSEEDKTVSIENSIFLAAALRNAGLDHDLCYFDKGKHGMGLGVKNGVRHPWTRLALAFLRREHLLR 562
            P+ IL E   IPLW+ G  P A G  A+D P L  + P        +V++ PGGGYR LSM KEGR  A +L +  GIAAFVL+YR+GP  YHHP +L D +R+++  R    Q +  RA  G   ++G                          SAGGHL+++   H +    +      DA E  S+RPDF IL YPVI++ +  TH+ SK  LL   P + +  + S E QV    PP              L+H+  D  V +ENS++   ALR AG+  ++  F  G HG G+ +++     W ++   +LR    L+
Sbjct:   25 PAPILQEPQTIPLWEEG-APGALGNAAEDIPTLTIYMPPNTTGPMTAVIVAPGGGYRALSMNKEGRAPANYL-NALGIAAFVLKYRLGPK-YHHPIELGDMQRAIRTLRARADQWHLDRARIG---VMG-------------------------FSAGGHLASTASTHFDGGHASAG----DAIERASSRPDFAILGYPVITLTEPWTHQGSKTNLLGETPDSAVARHLSTETQVNAETPP------------TFLFHTNADTAVPVENSVYYFLALRKAGVPAEMHIFKDGAHGAGMPMQDQALSEWPKVLANWLRASGFLK 300          
BLAST of NO29G00130 vs. NCBI_GenBank
Match: WP_006983369.1 (alpha/beta hydrolase [Chthoniobacter flavus] >EDY16431.1 alpha/beta hydrolase [Chthoniobacter flavus Ellin428])

HSP 1 Score: 157.9 bits (398), Expect = 9.600e-35
Identity = 116/315 (36.83%), Postives = 148/315 (46.98%), Query Frame = 0
Query:  249 PEGAIPLWKAGQVPLAKGRRAKDTPLLIPFYPDEAKWAGLSVVIMPGGGYRFLSMEKEGREVARWLCDEEGIAAFVLQYRVGPDGYHHPTQLLDGRRSVKKARELVRQHY--RRRAGGGERELLGGAAXXXXXXXXXXXXXXXXXXXXXXXSAGGHLSASVLVHPEEDEETRAEHVKDATEGYSARPDFGILVYPVISMDDKITHEKSKAFLL-PFPTANLTTYYSIEKQV---PPPXXXXXXXXXXXXXXLYHSEEDKTVSIENSIFLAAALRNAGLDHDLCYFDKGKHGMGL--GVKNGVRHPWTRLALAFLR 556
            P   IPLW     P A G +  D P L  F P   K  G ++VI PGGGY  L+   EG+  A WL  E GIA  VL+YR+G  GY HP  L D  R+V+ AR    + +   +R G     ++G                          SAGGHL++++L H +  +   A    D  E +S+RPD GIL YPVI+M    TH  SK  LL   P   L    S EK V    PP              L+H+ ED  V +ENS+  A AL +AG+  DL  + KG HGMGL  G   G  HPW    L +L+
Sbjct:   20 PLAPIPLW-PNAAPGALGDKDDDIPTLTAFLPSPDKATGAAIVICPGGGYGGLA-PHEGKGYAEWLA-ENGIAGLVLKYRLGSHGYRHPAMLNDAARAVRLARSKAGEWHIDVKRVG-----IMGS-------------------------SAGGHLASTLLTHFDAGKTDDA----DPIERFSSRPDIGILCYPVITM-GPFTHGGSKKNLLGDNPPQELVDLLSNEKHVTKDTPP------------TFLFHTYEDNAVKVENSLMFAKALHDAGVPFDLHIYQKGAHGMGLGGGHAGGPHHPWVADCLYWLK 284          
BLAST of NO29G00130 vs. NCBI_GenBank
Match: OJV06744.1 (endo-1,4-beta-xylanase [Verrucomicrobia bacterium 61-8])

HSP 1 Score: 157.1 bits (396), Expect = 1.600e-34
Identity = 114/307 (37.13%), Postives = 149/307 (48.53%), Query Frame = 0
Query:  253 IPLWKAGQVPLAKGRRAKDTPLLIPFYPDEAKWAGLSVVIMPGGGYRFLSMEKEGREVARWLCDEEGIAAFVLQYRVGPDGYHHPTQLLDGRRSVKKARELVRQHYRRRAGGGERELLGGAAXXXXXXXXXXXXXXXXXXXXXXXSAGGHLSASVLVHPEEDEETRAEHVKDATEGYSARPDFGILVYPVISMDDKITHEKSKAFLL-PFPTANLTTYYSIEKQV---PPPXXXXXXXXXXXXXXLYHSEEDKTVSIENSIFLAAALRNAGLDHDLCYFDKGKHGMGLGVKNGVRHPWTRLALAFLR 556
            +PLW  G  P A G  AKD P +  + PD  K  G ++VI PGGGY  L+   EG   A+WL +E GIA  V++YR+G  GY HP  L D  R+V+  R+        +AG                                  SAGGHL++++L H +           D  E  S+RPD G+L Y VI+M    TH+ SK  LL P P   L    S EKQV    PP              ++H+ EDK V +ENS+  AAALR  G+  +L  ++KG HGMGLG  NG  H WT   LA+L+
Sbjct:   15 LPLW-PGAAPGALGSEAKDIPTVTAYLPDADKATGAAMVIFPGGGYGGLA-SHEGEGYAKWL-NENGIAGIVVKYRLGKSGYRHPAMLNDAARAVRLTRQ--------KAG--------------------EWNIDPHRVGVMGSSAGGHLASTILTHFDAGN----PQSPDPVERESSRPDLGVLCYAVITMGPD-THQGSKNNLLGPNPDPALVELLSNEKQVTADTPP------------CFIWHTWEDKGVKMENSMAFAAALREKGVPFELHIYEKGGHGMGLG--NG--HRWTSDCLAWLK 269          
BLAST of NO29G00130 vs. NCBI_GenBank
Match: PHX84639.1 (endo-1,4-beta-xylanase [Opitutae bacterium])

HSP 1 Score: 157.1 bits (396), Expect = 1.600e-34
Identity = 118/312 (37.82%), Postives = 151/312 (48.40%), Query Frame = 0
Query:  249 PEGAIPLWKAGQVPLAKGR-RAKDTPLLIPFYPDEAKWAGLSVVIMPGGGYRFLSMEKEGREVARWLCDEEGIAAFVLQYRVGPDGYHHPTQLLDGRRSVKKARELVRQHYRRRAGGGERELLGGAAXXXXXXXXXXXXXXXXXXXXXXXSAGGHLSASVLVHPEEDEETRAEHVKDATEGYSARPDFGILVYPVISMDDKITHEKSKAFLL-PFPTANLTTYYSIEKQV---PPPXXXXXXXXXXXXXXLYHSEEDKTVSIENSIFLAAALRNAGLDHDLCYFDKGKHGMGLGVKN--------GVRHPWT 548
            P+ A PLW A   P A G    KD P L PF+P  AK  G SVVI PGGGY  L+   EGR+ A WL +  GIA FVL+YR+G  GY HP  + D  R+V+            RA  GE +L                            SAGGHL+++ + H +  +   A+ ++ A    S+RPD GIL YPVISM    TH  SK  LL   P+  L    S E QV    PP              ++H+ EDK V +EN++  AAAL+  G+  DL  + KG HG+GLGVK            HPW+
Sbjct:   21 PKEAFPLW-AKATPGALGTDPVKDIPTLTPFFPAAAKATGASVVICPGGGYGGLA-SHEGRDYALWL-NAHGIAGFVLKYRLGSAGYRHPAMMNDVNRAVRYV----------RANAGEWKL------------------DAKRIGVMGSSAGGHLASTAVTHFDMGKADAADPIERA----SSRPDLGILCYPVISMGAH-THNGSKNNLLGKEPSEELVKLLSNELQVTKSTPP------------CFVWHTWEDKGVKVENAMEFAAALQRNGVPFDLHVYQKGAHGIGLGVKGWDPEKTPVSALHPWS 284          
BLAST of NO29G00130 vs. NCBI_GenBank
Match: WP_108060727.1 (alpha/beta hydrolase [Spartobacteria bacterium LR76] >PTX96330.1 endo-1,4-beta-xylanase [Spartobacteria bacterium LR76])

HSP 1 Score: 157.1 bits (396), Expect = 1.600e-34
Identity = 112/306 (36.60%), Postives = 150/306 (49.02%), Query Frame = 0
Query:  253 IPLWKAGQVPLAKGRRAKDTPLLIPFYPDEAKWAGLSVVIMPGGGYRFLSMEKEGREVARWLCDEEGIAAFVLQYRVGPDGYHHPTQLLDGRRSVKKARELVRQHY--RRRAGGGERELLGGAAXXXXXXXXXXXXXXXXXXXXXXXSAGGHLSASVLVHPEEDEETRAEHVKDATEGYSARPDFGILVYPVISMDDKITHEKSKAFLL-PFPTANLTTYYSIEKQVPPPXXXXXXXXXXXXXXLYHSEEDKTVSIENSIFLAAALRNAGLDHDLCYFDKGKHGMGLGVKNGVRHPWTRLALAFLR 556
            +PLW  G  P A G   KD P +  + P+  K  G ++VI PGGGY  L+   EG   A+WL +E GIA  V++YR+G  GY HP  L D  R+V+  R+   +     RR G     ++G                          SAGGHL++++L H +           D  E  S+RPD G+L Y VI+M    TH+ SK+ LL P P   L    S EKQV P               ++H+ EDK V +ENS   AAALR  G+  +L  ++KG HGMGLG  NG  H WT   L +L+
Sbjct:   13 LPLWPDG-APGALGNEPKDIPTVTVYLPEPEKATGAAMVIFPGGGYGGLA-SHEGEGYAKWL-NENGIAGIVVKYRLGKSGYRHPAMLNDAARAVRLTRQKAEEWKIDPRRVG-----VMGS-------------------------SAGGHLASTILTHFDAGN----PQSPDPVERESSRPDLGVLCYAVITMGPN-THQGSKSNLLGPNPDPALVELLSNEKQVTP---------ETPPCFIWHTWEDKGVKMENSTAFAAALREKGVPFELHIYEKGGHGMGLG--NG--HRWTSDCLVWLK 267          
The following BLAST results are available for this feature:
BLAST of NO29G00130 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
WP_007416780.13.800e-3936.56alpha/beta hydrolase [Pedosphaera parvula] >EEF591... [more]
SDL43416.11.800e-3633.63Acetyl esterase/lipase [Catalinimonas alkaloidigen... [more]
WP_089683608.11.800e-3633.63alpha/beta hydrolase [Catalinimonas alkaloidigena][more]
SPE55329.13.900e-3635.74Alpha/beta hydrolase [Verrucomicrobia bacterium][more]
GBD34930.11.500e-3534.85Acetylxylan esterase [bacterium HR36][more]
OLC45952.15.600e-3534.671,4-beta-xylanase [Acidobacteria bacterium 13_1_40... [more]
WP_006983369.19.600e-3536.83alpha/beta hydrolase [Chthoniobacter flavus] >EDY1... [more]
OJV06744.11.600e-3437.13endo-1,4-beta-xylanase [Verrucomicrobia bacterium ... [more]
PHX84639.11.600e-3437.82endo-1,4-beta-xylanase [Opitutae bacterium][more]
WP_108060727.11.600e-3436.60alpha/beta hydrolase [Spartobacteria bacterium LR7... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL064nonsL064Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR079ncniR079Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR081ngnoR081Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR080ngnoR080Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO29G00130.1NO29G00130.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|674825gene_10452Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_101331g2gene9189Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO29G00130.1NO29G00130.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO29G00130 ID=NO29G00130|Name=NO29G00130|organism=Nannochloropsis oceanica|type=gene|length=5022bp
GGAGGATGTGTGAAAATGGGTTGAGATCCTTCCCCAAGACGATTTATGTC
ACTAGCGCTACCAACCACGCTCCTCCTCGCACGCTCTAAGCCACCTCCAT
CACGCCCCTGCTTACCAGCCGCTTTGCCCTACCCTCCCTCTCTCTCTCCA
TCTCCATCTCCATGTTTCTTCCTTCCTTTCTGCGTACCTCTTCCTTGCCA
CGCTCCAGCATTACCACCATCCCTTTCTGACCTTTCACGAGGGCGGCTGC
CAAGGCACAGCCTGCAGGCCCTGCGCCGACGATTATATACTTGGGTTTGG
AAGCTGCGGCAGAGGGGAAAGAGGAGGCAGGAGGTTCGACCATCATGATG
CGAGCGATGGGATTCTCGGCTAGGCTTGGCTTGCGATCTTGGTTTACGCG
ACTTGGGTGCTGCAGAAATGGAGAATGAGGACTGAGGCTGAATGCGCTAG
GCTGTTGATTTGCCCCCTGCGCGCCTGTATACGTGTGCATTGTGTGGGTG
TGGGTGTGGGAAAGCGCCCCATGACGCGCATAAGGGACGCGAAACAGCCG
CCGCCGGTCAGCCTCGCTGAATTCAAATCGTCCTTAGCTCACGTTGCTTA
GCATTGACCTACGTACAGCCGCACCCGGCAGCAGCACTTTTCCTACCCGG
GCAGACCCGGCTTCTCCGAAAGTCTGTCCGGACAAACCCCGTGAAGGGTG
TCTGTGAGGGAGGGGGGGTATGTATGGGGAAATTGGGTACAAGGGCCTCC
GCTCATGGGGTCGCGCCGAATCACTTGGTAACGCGTAAATCAAGGGCTTC
ATGACTTTTCTCTTCCCTTCTGTCTTTTCCTTTTCCCCTGCCCTTTCCGT
TCCTCTCGTTTTTACGCCATCGTTATTCCGGGTGCCAGGGTATCCAGTTG
AAAATCATTACCTGTGTGGGTTTTATCCGGGTTTTTACCCGGGTCTTGCT
GGGTGCCCGGAATGTCAATACCCGGCGCCGCTCTCTAACGTACACTGCCC
ACCAAATAGGCACAGAGACATGCTATCGCCTGCGGCAGACGAAGAGGAAC
TCTTTGGCTCTCAGGATAACGGGGACGACGGGGAGATTTCGCCCGTGGCT
AGACGACACAGACATACGCCACCACCAGGACCAAGCCGCCCTCCCTTGCC
TCCTCGCAGAAGTCAACCTCGCGCCCGCCCTGACCCATCGCAAGCCGTGC
AGCCACCATATCAATCACGGCAGCGACAGGCTCAAGAGCTCAAGCAGCAG
GAGGAGGAATTACTGCATGAGCATCGGCTGCAGCAGCAGCAGCAGCAGCA
GCAGCATCAGCAGCAGCAGGAGCAGAAGCAGAAGCAACAACAGCAACAAC
AGCTTCAACAGCCACCCTCTCGCCGATCCCCCATCTCCTCCTTCTTCATC
TTTGCCCTCACCATTGCCACGCTTTTGGCAGTCGCCCTCCTTCTCTCCGC
TGCTTTCCCCTCATCCACAGCGCATTTCGGTTTCCCTCTCTCTTCGTCCT
CGCCCTTCGATTTTTTCCCTCCCTCCGACCCATCATCCATCCTGCCGGAA
GGTGCCATCCCTCTATGGAAAGCAGGACAAGTTCCCTTGGCGAAGGGGCG
CAGAGCCAAAGACACGCCGCTCCTCATCCCCTTTTATCCCGACGgtaaga
aggagggagggagggagggagggagggagggagggaaggagtgccctaat
gaatcgccttttgtgccataactttcgcatatattagaagtattttattc
aaaatttattctcgaaagggacgggacgtgtttgcattaagtggtggttg
cagtgcagatggatgggattagtaagcagccgccgccaggagtgaataaa
tgcatacttctcacgcattcactcgtcccatcgattgacttgcccacatt
catgcacgatcaaaatagAAGCAAAATGGGCGGGTCTCTCTGTGGTGATC
ATGCCGGGAGGCGGCTACAGGTTCCTCTCCATGgcaagttctccttccct
ccctccctccctccctccccctcattcccctctctctctccctctctcat
tgaatcatgtagaaggaagccactgcaccctaccaacctcccttcacatc
ctcccctccatccccccctccctttttccctccctttctgttatgttcag
GAGAAGGAAGGGCGGGAGGTGGCGAGGTGGTTGTGTGACGAGGAGGGTAT
CGCTGCCTTTGTGTTGCAGTATCGCGTCGGACCTGATGGgtagggaggga
gggagggagggagggagggacgaagggtgcatctcccccgggggccacca
cccaaccgattttgtgacagcggatgaaacgtcagaccgctccctcacca
tctccttccctttctccctccctccctccctccctccctccctccttccc
tcagTTATCACCATCCGACCCAACTGCTGGACGGTCGGCGGAGCGTGAAG
AAAGCCCGAGAGCTCGTGCGGCAGCACTACAGAAGGAGGGCGGGAGGAGG
GGAAAGGGAACTGCTAGGCGGGGCCGCAGCAACGGCAGCAACGGCAGCAA
CGGCAACAACAGCAACAGTGGAGGGGGTTATGGGCGTGATGGGATTTTCA
GCGGgtaacgacaaggaaggagagaggcagggcgggagggcgagagggag
aggtgttaggatggtgctatagggctggtagagagaggaggaggagaagg
aggaggatgttgcaggagaagggccagaaaggcaactgtcttccaattac
cttgatcatgccctcaccccctaccatccctcccaccctcagGCGGGCAC
CTCAGCGCCTCGGTGTTGGTCCACCCGGAGGAGGACGAGGAGACCCGGGC
CGAGCACGTCAAGGACGCGACCGAGGGATACAGgtatggctgggaaggag
ggagggagggagggagggagggaggagggaaggaggagatgggatagaga
aagtttcgatcacgtagttctctgttctgccgttcaaacccctctcccct
ccccccccccctccctcctttgtggtagCGCTCGGCCTGATTTCGGTATT
TTGGTGTACCCCGTCATCTCTATGGACGACAAAATAACACACGAGAAGAG
CAAGgtaggtaggttgggaaggaagaaggaaggaagggagggagggaggg
agggagggagggagggagggagggggtctcaaatctcgtcttgtcctctt
ccaggtgtcacccccttatccccccctctccctccctcgcccacgcccac
ctcctccttcttcttcttcttaacgcgcggaatcactcgcaccggacatc
ctctttcccccctccctttccctccctccctccctccccccctccctttc
ctcctaccaaatcctccctccctccctttcctcgctcacacaccttctct
gcttcgtctttcggctccgttaatttgattctatcttgtgtgatcgacat
tggccctaattaaacctttgcttaatgtagcgaaatatttcatgggtcct
ttttttttccttaccacaaacagGCGTTCCTCCTCCCCTTCCCCACCGCC
AACCTGACCACCTACTACTCTATCGAGAAGCAGGTGCCTCCTCCTTCCTC
CCCGCCCTCCGCCCCTCCCTCCTTCCCGCCCATCTTTCTCTATCACTCCG
AAGAGGACAAGACCGTTTCCATTGAGAATTCGATTTTTCTGGCCGCAGCC
TTGAGGAATGCAGGGgtaagccgggaaagcagggagggagggaggaaagg
aaggaggaagcaagagataatctctttgtcacctcatgcagctgatcccc
gtccctcaccctctccctcactccattctttccttccttccttccttcct
cgttttgcagCTGGATCACGACCTCTGCTACTTCGACAAGGGAAAGCACG
GCATGGGGTTGGGCGTAAAGAgtacgtcctccttccctctctctctccct
ccctccctccctccctacctctctacctccctgcctactccctccgtcac
cctcccctgctcactgctcatgtgcctgctctcctccctccctccctccc
ttccttggacagACGGCGTGAGACACCCGTGGACCCGGCTCGCCCTGGCT
TTTCTCCGACGGGAGCACCTCCTTCGGGAAGGAGGGGGGGAGGACGAGAA
GAAGGAGGAGGTTCCGAGGGAGGACAAGCGGCGGCATGGCCCATGGGGTC
AGTATATATGCACGGGCATCCCCTGAGCGGGAGTGAGGAGAGAAGACGAA
TAAGGAAGTTGGATAGCTCGGTAGGGAGTGAGAAGAGAGCAAGAGAGACA
CAGATAGATATTGCTATAGCTCTGTATGGCAGTAGATGATAGGAAGAATG
ACAGGGATAGAAATTTTGACAGGACGTGAGAAGTATGGAAGAATGAGAAA
GAAAGATAGCTCTACAGAAAGTGAGAAGAATGGAAGAGTGAGAATGATAG
ACAGCTCTGAAGGGAATGAAAAGAGAGCGAGAGTAAAAAGAATGGATAGC
TCTGTACGTAGGTTGAAAGACGAATTGATCGCGAGCGAGAGGGCGGGGTA
AAAAAAGGCTCAAGCAGCCGTGGCCTCGGCGTCATGTCCGAAAGGTGAGC
CGACAAAAACATACCCCCGAGGGCGGGATAAAAAAAGGCTCAAGCAGCCG
TGGCCTCGGCGTCATGTCCGAAAGGCGAGCCGACAAAAACATACCCGGAA
AGTGAAATGAGAGAAACGAAACCAGCAATCAAATATGTAGCTTGAGTGTT
TTATAAGGGAAAAATTACGTCCATGCACCGCCGGCTTTCCTGCTTATGAC
TCGGGTGTCAAGGCCGTCAATAAAATGACTTCCCACAACATACCCGGAAG
GCCTCGCAAGGGAGGGAGCGAGGGAGAGAGGGGGAGAAGCAGAGATATCA
TGAATGACTGTCTATTGGTCTATGGTCAGATCCATCTCCTGAATGATATT
TCTGTTCACTCGATTGTCAATGCTTTAATTACGGCCCGTCTTGAAAGCGA
AAAGCAAAAGCAATAGCCCTGT
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protein sequence of NO29G00130.1

>NO29G00130.1-protein ID=NO29G00130.1-protein|Name=NO29G00130.1|organism=Nannochloropsis oceanica|type=polypeptide|length=594bp
MTFLFPSVFSFSPALSVPLVFTPSLFRVPGYPVENHYLCGFYPGFYPGLA
GCPECQYPAPLSNVHCPPNRHRDMLSPAADEEELFGSQDNGDDGEISPVA
RRHRHTPPPGPSRPPLPPRRSQPRARPDPSQAVQPPYQSRQRQAQELKQQ
EEELLHEHRLQQQQQQQQHQQQQEQKQKQQQQQQLQQPPSRRSPISSFFI
FALTIATLLAVALLLSAAFPSSTAHFGFPLSSSSPFDFFPPSDPSSILPE
GAIPLWKAGQVPLAKGRRAKDTPLLIPFYPDEAKWAGLSVVIMPGGGYRF
LSMEKEGREVARWLCDEEGIAAFVLQYRVGPDGYHHPTQLLDGRRSVKKA
RELVRQHYRRRAGGGERELLGGAAATAATAATATTATVEGVMGVMGFSAG
GHLSASVLVHPEEDEETRAEHVKDATEGYSARPDFGILVYPVISMDDKIT
HEKSKAFLLPFPTANLTTYYSIEKQVPPPSSPPSAPPSFPPIFLYHSEED
KTVSIENSIFLAAALRNAGLDHDLCYFDKGKHGMGLGVKNGVRHPWTRLA
LAFLRREHLLREGGGEDEKKEEVPREDKRRHGPWGQYICTGIP*
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Synonyms
Publications