NO29G00080, NO29G00080 (gene) Nannochloropsis oceanica

Overview
NameNO29G00080
Unique NameNO29G00080
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length8825
Alignment locationchr29:27216..36040 -

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Properties
Property NameValue
DescriptionRetinoblastoma-associated protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr29genomechr29:27216..36040 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006357regulation of transcription by RNA polymerase II
GO:0051726regulation of cell cycle
GO:0051726regulation of cell cycle
GO:0006357regulation of transcription by RNA polymerase II
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
GO:0005634nucleus
Vocabulary: INTERPRO
TermDefinition
IPR036915Cyclin-like_sf
IPR028309RB_fam
IPR002719RB_B
IPR002720RB_A
Homology
BLAST of NO29G00080 vs. NCBI_GenBank
Match: OQS04311.1 (hypothetical protein THRCLA_03444 [Thraustotheca clavata])

HSP 1 Score: 212.2 bits (539), Expect = 1.000e-50
Identity = 124/331 (37.46%), Postives = 176/331 (53.17%), Query Frame = 0
Query:  771 EETLKRVRRLAQALYYRVLLTMLDKESERLRRRDHGGLLRHSAFHRATVACCLEVLAKGLSLSTLSFPRPLDICQVHPFDFHKALESFIKACPGLPFLLRSHLLDVEEQILEKAAWLSSSPLFPLISSSETKGTWPPPSLRGEGREDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGACVWRRRKAKPTYSPALEYFFRKVMLLAAQKIHVLGKCLELPGATLDKIWTAFKHALGTRVVTLLPDRHLDHVILCSIYAICKVVKHRPEATFKRILEAHR---PAARNAFGVIKDIPLPNNKEGDIIQYYNLLFLPSLKPYILQF 1099
            E +L R + L   LYYRVL  +LD E++R +  DH  LL ++AFH+A  AC +EV+ K  SL TL+FP+ L  C V  FDF K LESF+K  P LP  L+ HL D+E+ +L+   W S+S L+ L++ S +                                                                P     L+ FFRKV+ LAA +I+ LG+ L+L    L++IWT  K  + T    LL DRHLDH+ILCS Y +CKV    PE TFKR+LEA++   P+A  +  ++++IPL  N +GD+I++YN  F+P+LK ++LQF
Sbjct:  453 EGSLGRTKLLGIGLYYRVLEALLDAEADRRQTSDHSMLLSNTAFHKALFACSMEVVLKAHSLVTLAFPQILTTCGVSAFDFGKILESFVKRAPQLPSELKRHLRDLEQTVLDSLVWQSNSGLYALLTESSSS----------------------------------------------------------EHSVNPGRFSILQIFFRKVLALAANRIYALGQHLKLEAKYLNQIWTCVKECIST-YQELLKDRHLDHLILCSFYGVCKVNHVLPEVTFKRVLEAYKRTYPSAAKS-SIVREIPLGANVKGDVIKFYNRCFIPTLKGFLLQF 723          
BLAST of NO29G00080 vs. NCBI_GenBank
Match: XP_008609167.1 (hypothetical protein SDRG_05238 [Saprolegnia diclina VS20] >EQC37647.1 hypothetical protein SDRG_05238 [Saprolegnia diclina VS20])

HSP 1 Score: 204.5 bits (519), Expect = 2.100e-48
Identity = 120/332 (36.14%), Postives = 174/332 (52.41%), Query Frame = 0
Query:  771 EETLKRVRRLAQALYYRVLLTMLDKESERLRRRDHGGLLRHSAFHRATVACCLEVLAKGLSLSTLSFPRPLDICQVHPFDFHKALESFIKACPGLPFLLRSHLLDVEEQILEKAAWLSSSPLFPLISSSETKGTWPPPSLRGEGREDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGACVWRRRKAKPTYSPALEYFFRKVMLLAAQKIHVLGKCLELPGATLDKIWTAFKHALGTRVVTLLPDRHLDHVILCSIYAICKVVKHRPEATFKRILEAHR---PAARNAFGVIKDIPLPNNK-EGDIIQYYNLLFLPSLKPYILQF 1099
            E +L + + +   LYYRVL ++LD E++RL   D   LL ++AFH+A  AC +EV+ K  SL TL+FP  L  C V  FDF K LESF+K  P LP  L+ H+ D+E+ +L+   W S S L+ L+++ E                                                               A P     L+ FFRKV+ LAA +I+ LG+ L+L    L++IWT+ K  +      LL DRHLDHVILCS Y +CKV    PE TFKR+L+A++   P++  A  ++++IPL     +GD+I++YN  F+P+LK ++LQF
Sbjct:  469 EGSLGKTKTMGVGLYYRVLESLLDAEADRLHTTDFSSLLTNTAFHKALFACSMEVVLKAHSLVTLAFPHILATCDVSAFDFGKILESFVKRAPSLPSELKRHMRDLEQTVLDSLVWQSQSGLYTLLATDE---------------------------------------------------------------ATPARFCMLQLFFRKVLALAANRIYALGQHLKLDAMYLNQIWTSVKECISNH-AELLRDRHLDHVILCSFYGVCKVNHVAPEVTFKRVLDAYKRTYPSSAKA-SIVREIPLDKPAVKGDVIKFYNRCFIPTLKAFLLQF 735          
BLAST of NO29G00080 vs. NCBI_GenBank
Match: XP_012203050.1 (hypothetical protein SPRG_08426 [Saprolegnia parasitica CBS 223.65] >KDO26352.1 hypothetical protein SPRG_08426 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 203.8 bits (517), Expect = 3.600e-48
Identity = 119/330 (36.06%), Postives = 174/330 (52.73%), Query Frame = 0
Query:  773 TLKRVRRLAQALYYRVLLTMLDKESERLRRRDHGGLLRHSAFHRATVACCLEVLAKGLSLSTLSFPRPLDICQVHPFDFHKALESFIKACPGLPFLLRSHLLDVEEQILEKAAWLSSSPLFPLISSSETKGTWPPPSLRGEGREDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGACVWRRRKAKPTYSPALEYFFRKVMLLAAQKIHVLGKCLELPGATLDKIWTAFKHALGTRVVTLLPDRHLDHVILCSIYAICKVVKHRPEATFKRILEAHR---PAARNAFGVIKDIPLPN-NKEGDIIQYYNLLFLPSLKPYILQF 1099
            +L + + +   LYYRVL ++LD E++RL   D   LL ++AFH+A  AC +EV+ K  SL TL+FP  L  C V  FDF K LESF+K  P LP  L+ H+ D+E+ +L+   W S S L+ L+++ E                                                               A P     L+ FFRKV+ LAA +I+ LG+ L+L    L++IWT+ K  +      LL DRH+DHVILCS Y +CKV    PE TFKR+LEA++   PA+  A  ++++IPL   + +GD+I++YN  ++P+LK ++LQF
Sbjct:  468 SLGKTKTMGVGLYYRVLESLLDAEADRLHTSDFSSLLTNAAFHKALFACSMEVVLKAHSLVTLAFPHILGTCDVSAFDFGKILESFVKRAPSLPSELKRHMRDLEQTVLDSLVWQSRSGLYALLAADE---------------------------------------------------------------ATPARFCMLQLFFRKVLALAANRIYALGQHLQLDATYLNQIWTSVKECISNH-AELLRDRHVDHVILCSFYGVCKVNHVVPEVTFKRVLEAYKRTYPASAKA-AIVREIPLDKPSIKGDVIKFYNRCYIPTLKAFLLQF 732          
BLAST of NO29G00080 vs. NCBI_GenBank
Match: XP_009836115.1 (hypothetical protein H257_11018 [Aphanomyces astaci] >ETV74457.1 hypothetical protein H257_11018 [Aphanomyces astaci])

HSP 1 Score: 196.1 bits (497), Expect = 7.500e-46
Identity = 114/345 (33.04%), Postives = 177/345 (51.30%), Query Frame = 0
Query:  758 GDLSTAAAGSHAREETLKRVRRLAQALYYRVLLTMLDKESERLRRRDHGGLLRHSAFHRATVACCLEVLAKGLSLSTLSFPRPLDICQVHPFDFHKALESFIKACPGLPFLLRSHLLDVEEQILEKAAWLSSSPLFPLISSSETKGTWPPPSLRGEGREDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGACVWRRRKAKPTYSPALEYFFRKVMLLAAQKIHVLGKCLELPGATLDKIWTAFKHALGTRVVTLLPDRHLDHVILCSIYAICKVVKHRPEATFKRILEAHR---PAARNAFGVIKDIPLPN-NKEGDIIQYYNLLFLPSLKPYILQF 1099
            G  S++ + S   E +L + + +   L+Y+VL  +LD E+ R++  D   LL +S+F RA  AC +EV+ K  SL +L+FP+ L  C V  FDF K +ESF+K  P LP  L+ H+ D+E+ +L+   W SSS L PL+S+ + K                                                                  +  L+ FFRKV+ LAA +I  LG+ L+L    L+++WT  K  +     +LL +RHLDH+ILC++Y +CKV    PE TFKR+L+ ++   P    A  ++++IPL     +GD+I++YN  F+P+LK ++LQF
Sbjct:  457 GSTSSSTSSSSHVEGSLTKTKAMGLGLFYKVLEALLDAEAVRIQSGDFSALLSNSSFTRALFACSMEVVLKAHSLVSLAFPQLLTTCDVDAFDFGKIIESFVKRAPQLPSELKRHMRDLEQTVLDSLVWASSSGLHPLLSNPQLKS-----------------------------------------------------------------AAILQLFFRKVLALAANRILALGQHLQLDAPLLNQVWTTVKECISVHHSSLLRNRHLDHMILCALYGVCKVNHVVPEVTFKRVLDGYKRVYPTVSKA-SIVREIPLDTPTAKGDVIKFYNRCFIPTLKAFLLQF 735          
BLAST of NO29G00080 vs. NCBI_GenBank
Match: XP_008876835.1 (hypothetical protein H310_11825 [Aphanomyces invadans] >XP_008876836.1 hypothetical protein, variant 1 [Aphanomyces invadans] >ETV94519.1 hypothetical protein H310_11825 [Aphanomyces invadans] >ETV94520.1 hypothetical protein, variant 1 [Aphanomyces invadans])

HSP 1 Score: 191.8 bits (486), Expect = 1.400e-44
Identity = 111/338 (32.84%), Postives = 173/338 (51.18%), Query Frame = 0
Query:  765 AGSHAREETLKRVRRLAQALYYRVLLTMLDKESERLRRRDHGGLLRHSAFHRATVACCLEVLAKGLSLSTLSFPRPLDICQVHPFDFHKALESFIKACPGLPFLLRSHLLDVEEQILEKAAWLSSSPLFPLISSSETKGTWPPPSLRGEGREDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGACVWRRRKAKPTYSPALEYFFRKVMLLAAQKIHVLGKCLELPGATLDKIWTAFKHALGTRVVTLLPDRHLDHVILCSIYAICKVVKHRPEATFKRILEAHR---PAARNAFGVIKDIPLPN-NKEGDIIQYYNLLFLPSLKPYILQF 1099
            A S   E +L + +R+   L+Y+VL  +LD E++R++  D   LL + +F R+  AC +EV+ K  SL +++FP  L  C V  FDF K +ESF+K  P LP  L+ H+ D+E+ +L+   W SSS L PL+++ + K                                                                  +  L+ FFRKV+ LAA +I VLG+ L+L    L+++WT  K ++      LL DRH+DH+ILC+ Y +CKV    PE TFKRIL+ ++   P    +  ++++IPL     +GD+I++YN  F+P+LK ++LQF
Sbjct:  472 ASSSNVEGSLAKTKRMGLGLFYKVLEALLDAEAKRIQAVDFSPLLSNPSFTRSLFACSMEVVLKAHSLVSMAFPHLLTTCDVDAFDFGKIIESFVKHAPQLPSELKRHMRDLEQTVLDSLVWASSSGLHPLLANPQLK-----------------------------------------------------------------TAAILQLFFRKVLALAANRIFVLGQHLQLDAPYLNQVWTTVKESISVHHSRLLRDRHIDHIILCAFYGVCKVNHVEPEVTFKRILDGYKRLFPTVSKS-SIVREIPLETPASKGDVIKFYNRCFIPTLKAFLLQF 743          
BLAST of NO29G00080 vs. NCBI_GenBank
Match: XP_008876834.1 (hypothetical protein, variant 2 [Aphanomyces invadans] >ETV94521.1 hypothetical protein, variant 2 [Aphanomyces invadans])

HSP 1 Score: 191.8 bits (486), Expect = 1.400e-44
Identity = 111/338 (32.84%), Postives = 173/338 (51.18%), Query Frame = 0
Query:  765 AGSHAREETLKRVRRLAQALYYRVLLTMLDKESERLRRRDHGGLLRHSAFHRATVACCLEVLAKGLSLSTLSFPRPLDICQVHPFDFHKALESFIKACPGLPFLLRSHLLDVEEQILEKAAWLSSSPLFPLISSSETKGTWPPPSLRGEGREDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGACVWRRRKAKPTYSPALEYFFRKVMLLAAQKIHVLGKCLELPGATLDKIWTAFKHALGTRVVTLLPDRHLDHVILCSIYAICKVVKHRPEATFKRILEAHR---PAARNAFGVIKDIPLPN-NKEGDIIQYYNLLFLPSLKPYILQF 1099
            A S   E +L + +R+   L+Y+VL  +LD E++R++  D   LL + +F R+  AC +EV+ K  SL +++FP  L  C V  FDF K +ESF+K  P LP  L+ H+ D+E+ +L+   W SSS L PL+++ + K                                                                  +  L+ FFRKV+ LAA +I VLG+ L+L    L+++WT  K ++      LL DRH+DH+ILC+ Y +CKV    PE TFKRIL+ ++   P    +  ++++IPL     +GD+I++YN  F+P+LK ++LQF
Sbjct:  453 ASSSNVEGSLAKTKRMGLGLFYKVLEALLDAEAKRIQAVDFSPLLSNPSFTRSLFACSMEVVLKAHSLVSMAFPHLLTTCDVDAFDFGKIIESFVKHAPQLPSELKRHMRDLEQTVLDSLVWASSSGLHPLLANPQLK-----------------------------------------------------------------TAAILQLFFRKVLALAANRIFVLGQHLQLDAPYLNQVWTTVKESISVHHSRLLRDRHIDHIILCAFYGVCKVNHVEPEVTFKRILDGYKRLFPTVSKS-SIVREIPLETPASKGDVIKFYNRCFIPTLKAFLLQF 724          
BLAST of NO29G00080 vs. NCBI_GenBank
Match: OQR86989.1 (hypothetical protein ACHHYP_09624 [Achlya hypogyna])

HSP 1 Score: 190.7 bits (483), Expect = 3.200e-44
Identity = 117/331 (35.35%), Postives = 171/331 (51.66%), Query Frame = 0
Query:  771 EETLKRVRRLAQALYYRVLLTMLDKESERLRRRDHGGLLRHSAFHRATVACCLEVLAKGLSLSTLSFPRPLDICQVHPFDFHKALESFIKACPGLPFLLRSHLLDVEEQILEKAAWLSSSPLFPLISSSETKGTWPPPSLRGEGREDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGACVWRRRKAKPTYSPALEYFFRKVMLLAAQKIHVLGKCLELPGATLDKIWTAFKHALGTRVVTLLPDRHLDHVILCSIYAICKVVKHRPEATFKRILEAHR---PAARNAFGVIKDIPLPNNKEGDIIQYYNLLFLPSLKPYILQF 1099
            E +L + + +   L+Y+VL  +LD E+ RL+  D   LL + AFH+A  AC +EV+ K  SL TL+FP+ L    V  FDF K LESF+K  P LP  L+ H+ D+E+ +L+   W S S L+ L S++             E R                                         C+             L+ FFRKV+ LAA +IH LG  L L    L+++WT  K  +      LL +RHLDH+ILCS Y +CKV +  PE TFKR+ +A++   PAA  +  +I++IPL +  +GD+I++YN  F+P+LK ++LQF
Sbjct:  475 EGSLGKTKHMGVGLFYKVLEALLDAEAIRLQTTDFSSLLSNVAFHKALFACSMEVVLKAHSLVTLAFPQILTTVDVSAFDFGKVLESFVKRAPALPSELKRHMRDLEQTVLDSLVWQSHSGLYALFSTAV------------ENR----------------------------------------FCL-------------LQLFFRKVLALAANRIHALGTHLALDLVYLNQVWTCVKECISNH-QELLRNRHLDHLILCSFYGVCKVNRVVPEVTFKRVTDAYKRTYPAAAKS-SIIREIPLDHGVKGDVIKFYNRCFIPTLKGFLLQF 738          
BLAST of NO29G00080 vs. NCBI_GenBank
Match: GAY05255.1 (Hypothetical protein PINS_013060 [Pythium insidiosum])

HSP 1 Score: 183.7 bits (465), Expect = 3.900e-42
Identity = 145/351 (41.31%), Postives = 195/351 (55.56%), Query Frame = 0
Query:  771 EETLKRVRRLAQALYYRVLLTMLDKESERLRRRDHGGLLRHSAFHRATVACCLEVLAKGLSLSTLSFPRPLDICQVHPFDFHKALESFIKACPGLPFLLRSHLLDVEEQILEKAAWLSSSPLFPLISSSETKGTWPPPSLRGEGREDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGACVWRRRKAKPTYSPALEYFFRKVMLLAAQKIHVLGKCLELPGATLDKIWTAFKHALGTRVVTLLPDRHLDHVILCSIYAICKVVKHRPEATFKRILEAH----------------------RPAARNAFGVIKDIPLPNNK-EGDIIQYYNLLFLPSLKPYILQF 1099
            E +LK+++ LA  L+YRVL  +L  E +RLR  +   LLR+  F  +   C LEV+ K   L TLSFP  L    V+ FDF K +ESF+K  P LP  L+ H+ D+E+ IL+  AW S S L+ +++ +                  XXXXXXXXXXXXXXXXXXXXXXXX                           S  L+ FFRKV+ LAA +I  LG  LEL  A L+++WTA K  + T    LL DRHLD VILCSIY +CKV   +PE TFKRI++A+                      RP++++   VI+DI L + +  GDII++YN  F+P++K ++LQF
Sbjct: 1032 EGSLKKMKNLAITLFYRVLEALLRTERDRLRSSNFTTLLRNETFISSLFTCSLEVVLKAHGLITLSFPFLLGTLGVNAFDFGKVIESFVKHVPKLPSTLKRHMRDLEQVILDSLAWRSDSGLYVVLAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXR--------------------------STVLQLFFRKVLSLAASRIFRLGNSLELDAAVLNQVWTAIKECISTH-HDLLKDRHLDQVILCSIYGVCKVNHVKPEVTFKRIIDAYKKLQTPHWSSNTNSAFSSASLARPSSQHNRDVIRDILLDDRRSRGDIIKFYNRCFIPTMKVFLLQF 1355          
BLAST of NO29G00080 vs. NCBI_GenBank
Match: CBJ27990.1 (Putative retinoblastoma [Ectocarpus siliculosus])

HSP 1 Score: 170.2 bits (430), Expect = 4.400e-38
Identity = 159/404 (39.36%), Postives = 208/404 (51.49%), Query Frame = 0
Query:  761 STAAAGSHAREETLKRVRRLAQALYYRVLLTMLDKESERLRRRDHGGLLRHSAFHRATVACCLEVLAKGLSLSTLSFPRPLDICQVHPFDFHKALESFIKACPGLPFLLRSHLLDVEEQILEKAAWLSSSPLFPLISSSETKGTWP-------------------------------------PPSLRGEGREDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGACVWRRRKAKPTYSPALEYFFRKVMLLAAQKIHVLG-KCLELPGATLDKIWTAFKHALGTRVVTLLPDRHLDHVILCSIYAICKVVKHRPEATFKRILEAHRPAARNAFG------------VIKDIPL---------------PNNKE-GDIIQYYNLLFLPSLKPYILQF 1099
            S  A GS      +   ++ A+ALYY  L  +LD E+ERL   DH  LL     H+A +ACCLE + K  SL +L+FP  L    +   D  K LESF + CPGLP  L+ HL +V+ +I+E+ A  + + +F LI   E  G WP                                     P S   E    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                 L+ FFR++M  AA+ +  L  + L LPG T D++WT  K  +  R   +L DRHL HVILCS Y++CKV    PE TFKRI+E ++  A    G            V+KDI L               P  +E GDII++YN +++P++K ++L+F
Sbjct:  618 SLDARGSDLEAGVVGDAKKKAEALYYSTLEVLLDAETERLSSEDHSRLLEQETLHKALLACCLEAVLKASSLLSLTFPWVLRRMDIDALDLCKVLESFARFCPGLPMNLKYHLFEVQTEIVERLALEAGAGVFRLIEEHEAAGEWPVTPLRETDVAPPTGSHMAGLPCSPQKVDCQPQANAGKPASSLDEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDLFFRRLMKRAAEVVAELCLRRLHLPGDTADQVWTVIKRCVAQR-TEILKDRHLHHVILCSTYSVCKVNGVTPEVTFKRIIEQYKQLAGAGGGGLSGGVGTPRLSVVKDILLKRGHDEEAGGEGAGEPQQEERGDIIKFYNKVYIPAMKQFVLEF 1020          
BLAST of NO29G00080 vs. NCBI_GenBank
Match: XP_013404180.1 (retinoblastoma-associated protein-like, partial [Lingula anatina])

HSP 1 Score: 164.5 bits (415), Expect = 2.400e-36
Identity = 114/333 (34.23%), Postives = 156/333 (46.85%), Query Frame = 0
Query:  779 RLAQALYYRVLLTMLDKESERLRRRDHGGLLRHSAFHRATVACCLEVLAKGL----------SLSTLSFPRPLDICQVHPFDFHKALESFIKACPGLPFLLRSHLLDVEEQILEKAAWLSSSPLFPLISSSETKGTWPPPSLRGEGREDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGACVWRRRKAKPTYSPALEYFFRKVMLLAAQKIHVLGKCLELPGATLDKIWTAFKHALGTRVVTLLPDRHLDHVILCSIYAICKVVKHRPEATFKRILEAHRPAARNAFGVIKDIPLPNNKEGDIIQYYNLLFLPSLKPYILQFASS 1102
            +LA  LYYRVL  ML  E +RL R D   LL +  FH++ +AC +EV+              S +  +FP  L +  +  ++FHK LESFI+A P LP     H+  +E QILEK AW S SPLF L+ S+E     P PS+                                             + V   R+  P  S +L  FF KV  LA  ++  L   L +P     KIWT  +H + TR   LL DRHLD V+LCS+YAI KV+    E  FK I+  ++        V K+  +  N+   II +YN +F+ + K  ILQF+ S
Sbjct:   42 QLAVRLYYRVLEKMLKAEEDRLSRADFSTLLNNDTFHKSLLACAVEVVMAAYASTVPGNATPSSTDTAFPWVLAVFGLQAYNFHKVLESFIRAEPCLPRETIKHIQSIENQILEKIAWKSDSPLFDLLKSTEI----PAPSIPVSPGVKEQPKNGGKPVTAAQLYLSPTNGLQATCKMADTAQVIASSSV---RQTPPKRSHSLNLFFNKVSRLAYHRLQDLCTLLAIPKDMQLKIWTCLEHCI-TRKPDLLRDRHLDQVMLCSVYAIHKVISTDTELKFKTIVHMYKSMPHATQEVFKNTLISGNEYDSIIGFYNRVFMQATKNVILQFSPS 366          
The following BLAST results are available for this feature:
BLAST of NO29G00080 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
OQS04311.11.000e-5037.46hypothetical protein THRCLA_03444 [Thraustotheca c... [more]
XP_008609167.12.100e-4836.14hypothetical protein SDRG_05238 [Saprolegnia dicli... [more]
XP_012203050.13.600e-4836.06hypothetical protein SPRG_08426 [Saprolegnia paras... [more]
XP_009836115.17.500e-4633.04hypothetical protein H257_11018 [Aphanomyces astac... [more]
XP_008876835.11.400e-4432.84hypothetical protein H310_11825 [Aphanomyces invad... [more]
XP_008876834.11.400e-4432.84hypothetical protein, variant 2 [Aphanomyces invad... [more]
OQR86989.13.200e-4435.35hypothetical protein ACHHYP_09624 [Achlya hypogyna... [more]
GAY05255.13.900e-4241.31Hypothetical protein PINS_013060 [Pythium insidios... [more]
CBJ27990.14.400e-3839.36Putative retinoblastoma [Ectocarpus siliculosus][more]
XP_013404180.12.400e-3634.23retinoblastoma-associated protein-like, partial [L... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL064nonsL064Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR079ncniR079Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR081ngnoR081Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK008390NSK008390Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO29G00080.1NO29G00080.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|634138gene_10457Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_101418g1gene9208Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO29G00080.1NO29G00080.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO29G00080 ID=NO29G00080|Name=NO29G00080|organism=Nannochloropsis oceanica|type=gene|length=8825bp
ACAGAGATGCCAACACATAGGATAGATCCCGTGGCCCAGGCCTGCTTCGA
TGAGGTGACGGTGGCTCTGGGCGAGGGGGAAGGATCCGTCAAGACCAAGG
CTCGAGAGgtacgttctagctctggaggtagggacaaagaacatcgtcgg
tcgaggtggtgacgatggcgagaaagagggggtggatgttatacctcata
tatccgatgcggtgcctactcttcttatcctcagcacaacccctctctcc
ttccctcagTATCTCGCCGATATCCTGGCCCTCCGCATCCCTCCCGATAC
GCACCGCCCCGGCCCCTGGCTGTGGGTGGCCTGCAGTGTTTTGATGGCCC
TGTTTGAAGGGGGCATGCCCGGGGGCAAGACGTTGGGGGACGTGCTCAAG
gtaatggtaaaggagggcaaggaaggtctgaagggagggagggagggagg
agtgtctgcacatatactcccatgcattcattcatctgacaacatgtcaa
tgcagGCGACGGGCCTTAGGCCGTTAGAATTCGATGATTTTCTTGCGCAT
CTAGCCCTCCTCTCTCAGCGGCTGGAGGGACTCTCAGATGACGTAAGGGA
GCTGGCGGGAAGCCTCAGgtagggaaggagggatggagggagggagcgcg
ggagggaggagttcacggcgggggatggttgaattgcctcagagaggact
cagagaggaaatctgaggagaaaaagcatagtctatcgttgtttctgatt
ttgtcgtactcaccgccacctatgtttgtgttgtgttgtgaacagGCAGA
GTTGGAATGAGACGTCATGCGTCTACTCTAAGTACGTCCAGCTGTGGAGC
CACCGTCACAAgtaagaagagagggggggagataggggggtagggagaga
gaggaggcaatacgttgggtccttgaaaaggcgatcaagcagccaagcag
ccagactctcacactcctccctccctccctccctccctccctcccttcct
ttctcccctcagGGTGTCACCCGTGGGCCTTCCCTCCCTCGGGGATGACG
ACCGCATTATGCCCGGTGCTTTCAGCTTCGGCTGGTATTTGTACATTAAT
GTGAACCAGGACAAGgtgggtagggaggtcgggaaggcgggaggaaagga
gggaggtggaagggggggagggagggatggaacaccactagcacggtagt
gacccaccaccctctctccttgaggacatggtcgctatatcgttcacgac
accctcgttcgtgatgcccttctccatggcgccctcatccatgatcctcc
cctccctccctccctccctccctccctccctcagGACCTGGTGGCATCCT
TCCACGTCATGCTGGCCAGCCTCGAGTTCGTCCTGCGGCATGCCAAGGGC
AAGGGAGAGGGCGAGAGTGCGGGGGAAGGGAGGATAGATGGGGGGGCAAG
GAGCACTCTGAAAAGTGAAGTTCAAAAgtaagggatatgaggaggggagg
cagggaagggagggaggcagggaaaggagggatggcacccgtgtattcac
acctcttaatttgttcatctcttaatttactcatcggttcatcgatgttg
ttattatttcattactgataattgattagctggctcatggattcatgccc
tcgccctctcactctttccatcccacagGCTTCAAGCCGAGGGGAGAGTA
AAGAGGGAAGAAGACAAGGACGGCGAGGCTCTCAAGAAGGGAAAGGGCAA
GAAGCCCGCGCGTGCCTCCTCCCTCTCTCCCTCCCTCCCTTCACGCGGGA
CGGGGAAGGCCGTGATGGAGAGCATGGAGGAGGACGCAATTGCTGCATTG
TTTATGATGGGGgtgaggaaaaggagggagggagggagggagggagggag
ggagggagggagggagggagggatgctttatgaaacgtgcccttatttca
tatttttttgaaacatgtttcaaaattcaaaaatgaacagGCTGCTAACG
CTGCCCCCTCTTCCTCTACCTCGTCCGCTCATGCTTCTTCCCCACCTGCC
TCCTTGACGCTGCCGCTCTTCGAGAGCGTTGGCGGGAAAGGAGGGGGAGG
GAGGGGAGGGAGGGAGGGAGGACGGGGGGGACGGGGAGGGTATGAGAAGG
TGTCCAAGGTGAAGCAGGACGTGCTCGAGGAAGACGCGAAAAAGgtagga
actgatggagggagggagggaaggagggagggagggagggagggaggggg
gatgctcactcattttgaccattatttgatccccacattctcagGTCCGT
GACTTTATCGGCGCACTGCTTCAGGAAGGACGTTTGCTCATGgtacgtgc
cccctctccctccctcgctccctccctcccttcctccctcctccctccct
tcctatacacctgatcctgatatttccctcttcttctcgttctcctcccc
ctacgcctcccctcctcattcatcgcagGGTGGCCAAAGCGGTCGTGCTG
TCCTTCTCCCCTCGTCGCCTCTGTCCGGCACCGCCGACCTGTCCCCGCTC
TTCTCCGAGGAgtaaggagggagggaagaagagagggagggagggaggga
tggaaaaagagaaagagggagggagggagggagggagggaggtcatacag
tacccgttcaactcgcccacctctaccaccagagcgccttccatcatggt
atttatttgtattccgccattcacgacattcattattaattcattgatat
ccacgctcacccacccacccacgcacacgcacacacctacacacactcaa
ttccagGGTTCTCCCGCACAACGTCCGTGCCCTACACGATGCCTACCAGG
TCCGCTTGAGGGGGGAAGGAGGGGGGGAGGGCGGGAGCGAGGGAGGGAGC
GCAAGGCGGCGGTGCTTTCTGGATGCTCGCTTCGTCCTGACCTTCCCCTC
GGCCAAAGACGATGCCACGGAAGAGCCCGTCATCGCCCTCCCTCCCGCCC
TTGCCCTCCCTCCCTCCCTTCCTACCCATGTGGCCTCCTCCTCTTCAGGC
CCTGCCCATAACGGAGGGGAGGGAGGGAGGGAGGAAGGGAAGGAGGGAGG
AGGTGGGGGAGGAGGGGAAGCACATCCCGTGACGTATACGCCGAAGAAAT
CTTCGCGTCCGGCGGGGCCAGCCGTGACGCCCAGgtgagggagggaggga
gggagggagggagggagggagggagggaaggcaagggggaccaagtctca
gtacattgaagagggcgttctttacgattctcacggccaccctcaaccca
tcattcccttcccccttcctccccccctccctccctccatccctccctgc
agCACCGGCAGCCGCCTGTTATTCCGGGACTACCACGCCCTGGCATCAGC
CGACCCTCTCCTGCAATCGCCCTTCGCCGCCGCCTCCTCCACCTCCTCCC
CCCGCCCCTCATCTTCCTTTACAGCGGCATCCATGgtacgcctagaggga
aaataggagagagggagggagggagggagggcgggagggagggagggagg
gaaggagtgaaaggatagtctcgtctctgcgaggaatccggtccacgcct
ctctccaccgcctgccccaccttctctccccttttctttcttctgcttct
cttcttcttatccccccctcctcttgtgctcttcttctcccttctcctct
ttccttcctcccctctccattcccttcttcctctctccatctccttcacc
tccccatgtctccatcccctccatccctatctattccctccattatcttg
tctcccttttttcttccagACGCCGCAAAAGCCACCCCCGGGCAAGTCCA
AGGCCCGCACTCCCACTCGgtaagcaccttcttgtcctccctccctccct
cctcccctccctccctccctccctctctctttccctccttccttccttcc
ctcttgcccttccatggacgcctctctgaaagaagatgagggtatccata
cctactccttcctaaactgactcccctccctccctccctccctccctccc
tccctccctccctccctccctccctccctgtccagATCTCCTCGTGTCCC
CCACCCTGGATTCTCACCAGGCGTGTCGCAGACGCCCGTGTCCGCGGCGA
TGGAGGCCCTCAACTGGCTGAATGCGCTGGAAGgtaggcaaagagggagg
gagggaaagagggatggaaagacgaaagttgtcatggctgactcccacac
gatcgcttgtccggaaggtgggagagagggaagaagggagggaggaggga
gggttacatcggttctgacgtctctttcacagGGCTTCCCGCCTCGCCGT
CGCACGCTCTCCTCGATTATTATCGGGCTGCTTCCCTACCGCCGGgtacg
ttcttcccgccctccttccctctttccctccctccctcctctcttaccga
ttcatcacccacactcaaccaattttctcccacgaccgcagATGAGCTAG
AGCAACAACAGCAGCAGGAGCGGCAACAGTCATATGCCCCTTCAACAACA
ACAAGAACAACAACAAGAACAACAACAACAACAACAACAACAACAACAAC
AACAACAGCAGCAGCAGCAACAACAACAACAACAACAACAACAACAGCAG
CAGCAGCAGCAGCAGCAGCAGCAACAGCAGCCGGGTGGTATACATCCCTT
GTGGGCCATCGTCTGACGTCTCTCCTTGACCAAATATCTCACCCCAGCAG
CAGCACCACCACCATCCCACCGCCCACGCCTACAACCACCTCAACTGCCG
CTGCTGCTGCTGCTCCCGCTGCTACTACTGGTGCTCCTCCTCCTCCTTTT
GACGGGGATTTGAGCACTGCAGCCGgtgggtttccatttccttctgttcg
gccttggcagccacatgactggtaatactcacctccctccctctctaact
ccctccctccctccagCTGGCTCCCACGCCCGTGAAGAAACTCTCAAGCG
CGTCCGCCGTCTCGCCCAAGCTCTCTACTACCGCGTCCTCCTGgtacctc
cttccttccctccctccctccctccctccctccctccctccctcccgctg
cttatgccctccctcccccctccctccctccagACCATGCTGGACAAGGA
GAGCGAGCGTCTGCGTCGACGCGACCACGGGGGCCTCTTACGTCATTCCG
CCTTCCACCGCGCCACCGTCGCCTGCTGCCTCGAGgcaagttcatgccct
ccctccctccctccctccctccctcctttccccctcactcacctcccggt
gcatctttctcacgatggtgtcccttcttcccttcctctggccctacttc
cctctctagGTCTTAGCCAAAGGCCTCTCCCTTTCGACCCTCTCCTTTCC
CCGCCCCCTCGACATCTGTCAAGTACACCCTTTCGATTTCCATAAGgtta
gctgccctgcctccctccccctgccggcacgcgatttctttcatagacca
cccctccctccctccctccctccctccctccctcccccagGCCCTCGAGT
CGTTCATCAAGGCATGTCCCGGCCTGCCCTTTCTCCTCCGCTCGCATTTG
CTGGACGTGGAGGAGCAGgtagggagggagggagggagagagaaaaggtt
caggttttgtcacctcggtactccatcttcccgacttctcacctctctct
ccttccctcccgccttacctccctttcatcctctctccctccctcgctcc
ctccctccttccctccctccctctcttcgcagATTCTTGAGAAGGCCGCG
TGGCTGTCTTCGTCCCCCCTCTTCCCTCTCATCAGCAGCAGCGAGACGAA
AGGCACCTGGCCCCCACCGTCTCTGCGGGGAGAAGGGAGGGAGGACAGGA
GGGAGGACGGGGAAGGGGAGAAGGAGAAGAAGGAGGGGAAGGAGAACAAA
GAGGGGCTGGTGGCGGTGGCGATGGACGTAAAGGAGGAGGAGGAGGAGGA
GAAGCAGGGAGCATGCGTGTGGAGGAGGAGGAAGGCCAAGCCCACGTACA
GCCCTGCGCTCGAGTACTTCTTTCGGAAGgtcaggggagaccgcccgccc
tccctccctccctcgctgtcccctccatttaatctgcgcatctttgacaa
ttaaaccaacacacaccctcccctcctccctccctccctccctccctccc
tccctccctccctcgctcgctccagGTGATGCTCCTAGCGGCCCAGAAGA
TCCATGTGCTGGGCAAGTGCCTCGAGgtattccctccctccctccctccc
tccctccctccctccctccctccctccctccctccctccctccctccctc
cttccctttaccccttccctcttgtctcgccccgtcttctccctcctctc
tccatttaacctcccactcctctctcgtttccattttctgccctccctcc
ctgcccccctccagCTGCCTGGAGCTACCTTAGACAAAATATGGACAGCC
TTCAAGCACGCCCTCGGCACCCGCGTCgtacgtcacgtcctccctccctc
cctccctccctccctccctccctccctccctccctccctccctccctccc
tccctccctccctccctggtagcctgcccacaccacttttctctttgtcg
tttatcttgtcttctccccctttctctcttctttcctccctcctctcttc
ttttctctgccgccccgctcctcctttccatcacatcaaccctccctccc
tccctccctccctcagGTTACCCTCCTCCCCGATCGTCACCTCGACCACG
TCATTCTCTGCTCCATCTACGCCATCTGCAAGgtagacccttcgtctctc
cctccctccctccctccctccctccctcccttgcacgccatgtgacaatt
tccctcgcccatccccctccttttccccctccttctctccctccctcgat
tttcctctgttcccgtccgagtccccataacatctcgcaatccttcacac
tcaatctttccctccttcctcccttcctcccttcctcagGTGGTCAAGCA
CCGGCCCGAGGCCACGTTCAAGCGCATCCTGGAGGCTCATCGGCgtctgc
cctaccccctcctttcctctgcaagtggaggagggggaggaggggggggg
ggacgtcagcagCTGCAGCCCGCAATGCGTTTGGCGTTATTAAGgtaagg
cctctctttccgcctgttgctccctccctccctccctcccgccctctttc
cctccctctctccctcttgcttgacactcgccggaaatcctcttcatgtg
tgtgatttcctccctcccttcctctctctctcccttcctctctccctccc
tccctccctccttcccagGACATCCCCCTGCCCAACAATAAGGAGGGCGA
CATCATCCAGTACTACAACCTCCTCTTCCTCCCTTCTCTCAAGCCCTATA
TACTCCAGTTCGCGTCCTCGTCCTCCCTTCCTTCCTCCTCCTCCTCCTCC
TCCTCCATCCCTTCCTCCACCTCTCCGACTGCGATACAAAAGGAGGAGGG
AAGGAGAGCGGGAAGGAGGGCAGGAGGGAGGGCAGGAGTGTCTCCTCCCG
TGGAAAAGCCGTCATCGCCCATGTCGCCGCTGCCAAAGAGGAGGGAGGAG
GAAGGAGGAGGCAGTGGTGGTGGTGGCGGTGGTGGAGGAAGAGGAGGAGA
AGGAGGAGAAGGAGGAGATGACAGAGTGGGAGCAGGCCCAAgtgagtgac
tttctgggatgtttctcgtccggcgcgttcttctcccctcccgttgtcga
tcttcttactctcttgcccctgcttaccctccttcctccctccctccctc
cctccttccctcccagCCTCCTCGCCCGCCATCTCCCCCCTCCCTCTCCC
TGCTCCTCTCCGCTCTCCCCAAAAACGCCTCGGGCATTCCAACATCTACC
TGACTACCACCAGCACCCATCCTATCGCCTCCTCCCTCCTGCCCTCGTCC
TCTATTTCACCAACTCGGAGCAGTAAGCATTCATCGGCCGCTGCTGCGGC
GGCGGCAGTGGCGCTGGCAGCAGCTGCTACTGCTGCTTCGTCGTCTTCTT
CCTCCCTCAGTCGCTCCTTGTCTGGAGGAGGTGAGGGAGGGAAGAAGGCT
AAGGAAGTGAGGGAGGGACGGAAGGAGGAGGAGGACCAAAAAAGGAAGGA
GGAGAAAGAAGAGGAGGAAGGGGAACGCAATCCCTCTCCACCGGCGACTG
CGTATTTCCCTGTACAGgtagggagggaggaaggagcggatgggtggttc
tatggtcagctggtggttttcagacgagcaagagtcttctacgacatttc
cattttgtttcacctctcactcaccgacttacacattcttccctccctcc
ctgaagCCGCCAGTGCCGTCGCCCGCTGCCAGCTACCGCGATGCCCGCTA
TCAGCTCACGCCGCGAACACGCATCCTGTATGCCTTCGGAGAGgtaagcc
cctccgtccctctctccctccctccctcctttcgttctcgccctccctcc
ctccctccctccctccctccctccctccctccctcctttttctcgtccct
aatctacctcacgcctgcttgcctgctcctcctgttggtctctccctccc
tctttccctccctcagTCTCCGGCCAAAGACCTGGAGCTGGTAAATCGGG
CCATCAATCGACCCTTCCCGTCCCCGTCCTCCTCCCCTTCCCCCTCGTCC
GCCAAAAGAGGAGGAGGAGGAGGAGGAGAAGGAGGAGCAGGAGGACGACG
CAGTCAGAAGAAGCTGAAGATGTGA
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protein sequence of NO29G00080.1

>NO29G00080.1-protein ID=NO29G00080.1-protein|Name=NO29G00080.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1407bp
MPTHRIDPVAQACFDEVTVALGEGEGSVKTKAREYLADILALRIPPDTHR
PGPWLWVACSVLMALFEGGMPGGKTLGDVLKATGLRPLEFDDFLAHLALL
SQRLEGLSDDVRELAGSLRQSWNETSCVYSKYVQLWSHRHKVSPVGLPSL
GDDDRIMPGAFSFGWYLYINVNQDKDLVASFHVMLASLEFVLRHAKGKGE
GESAGEGRIDGGARSTLKSEVQKLQAEGRVKREEDKDGEALKKGKGKKPA
RASSLSPSLPSRGTGKAVMESMEEDAIAALFMMGAANAAPSSSTSSAHAS
SPPASLTLPLFESVGGKGGGGRGGREGGRGGRGGYEKVSKVKQDVLEEDA
KKVRDFIGALLQEGRLLMGGQSGRAVLLPSSPLSGTADLSPLFSEEVLPH
NVRALHDAYQVRLRGEGGGEGGSEGGSARRRCFLDARFVLTFPSAKDDAT
EEPVIALPPALALPPSLPTHVASSSSGPAHNGGEGGREEGKEGGGGGGGE
AHPVTYTPKKSSRPAGPAVTPSTGSRLLFRDYHALASADPLLQSPFAAAS
STSSPRPSSSFTAASMTPQKPPPGKSKARTPTRSPRVPHPGFSPGVSQTP
VSAAMEALNWLNALEGLPASPSHALLDYYRAASLPPDELEQQQQQERQQS
YAPSTTTRTTTRTTTTTTTTTTTTTAAAATTTTTTTTTAAAAAAAAATAA
GWYTSLVGHRLTSLLDQISHPSSSTTTIPPPTPTTTSTAAAAAAPAATTG
APPPPFDGDLSTAAAGSHAREETLKRVRRLAQALYYRVLLTMLDKESERL
RRRDHGGLLRHSAFHRATVACCLEVLAKGLSLSTLSFPRPLDICQVHPFD
FHKALESFIKACPGLPFLLRSHLLDVEEQILEKAAWLSSSPLFPLISSSE
TKGTWPPPSLRGEGREDRREDGEGEKEKKEGKENKEGLVAVAMDVKEEEE
EEKQGACVWRRRKAKPTYSPALEYFFRKVMLLAAQKIHVLGKCLELPGAT
LDKIWTAFKHALGTRVVTLLPDRHLDHVILCSIYAICKVVKHRPEATFKR
ILEAHRPAARNAFGVIKDIPLPNNKEGDIIQYYNLLFLPSLKPYILQFAS
SSSLPSSSSSSSSIPSSTSPTAIQKEEGRRAGRRAGGRAGVSPPVEKPSS
PMSPLPKRREEEGGGSGGGGGGGGRGGEGGEGGDDRVGAGPTSSPAISPL
PLPAPLRSPQKRLGHSNIYLTTTSTHPIASSLLPSSSISPTRSSKHSSAA
AAAAAVALAAAATAASSSSSSLSRSLSGGGEGGKKAKEVREGRKEEEDQK
RKEEKEEEEGERNPSPPATAYFPVQPPVPSPAASYRDARYQLTPRTRILY
AFGESPAKDLELVNRAINRPFPSPSSSPSPSSAKRGGGGGGEGGAGGRRS
QKKLKM*
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