NO29G00070, NO29G00070 (gene) Nannochloropsis oceanica

Overview
NameNO29G00070
Unique NameNO29G00070
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length6795
Alignment locationchr29:19684..26478 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr29genomechr29:19684..26478 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR006869DUF547
Homology
The following BLAST results are available for this feature:
BLAST of NO29G00070 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL064nonsL064Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR079ncniR079Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR081ngnoR081Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK008387NSK008387Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO29G00070.1NO29G00070.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO29G00070.1NO29G00070.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO29G00070 ID=NO29G00070|Name=NO29G00070|organism=Nannochloropsis oceanica|type=gene|length=6795bp
AACAGTGAGAGAATTAAAAATTAAATTATGTTGTGCCCACCGCCGCGTCT
CCTCCTAAACATTGAAACCACGCAGCGCCCGGAATGGACAGCTGCCTCAA
GTCTTTTTAATTGGGCCGCTCTTCTGGTCCCTGTTCCTACTTCCTCCTCC
TCACCCTCGTCCTCGTCCTTCTACAAAGGGAGTGCCTGCCTTCCTCCCTC
CCGCTCAGCCCATCGCCGAGCAATTCTGCAGGCCTTTCTCTCCTTCCTTC
CCTCCGCGCTTTCATTCCCTTATCCCTCTGTGCACACCCTTGTGGTCACA
GATGGCGATGGAAGAAGGCATTACGGCTTCTTGGCCAAGGCTGGACAAGA
GGCCACCGCACCAGTCCTTCTGTTAGAGAGTTCTTTTCCGTCCTTTGCCG
CAGCCAGGACTTTGTTGCGTTATTTGATTCAACATCCCAGCGCAATAGCT
GTAGAAACATTGATTGTGCAAGGGCTTCCGGTGCCCTTGCCGGGTGTGAG
AGTTGAAGTTTCATTGCCTCGTGGTGCTGACATTGCCCGGGGGGAAAGCG
GAGGAAGAGGAGAAAGAGGAAGCGGCTTGCTGATAACACAGAAAAGAAGA
CAAGAACAAGAGACATCTGACCTTCTGAGCTACGGCTGGCCACTTGGTAG
CCCCTTACCTGAGGATGAGTGCCTGGACCGGCTCTTGTTGTTGGGGATGA
GCCCTCAGACCATGACTAGGCTATGGCTCTCGCTTGTACTGGAGAAGAAG
GTGGCGATCACCACACGGGGACACCCGCATCTGTTGCCATTGCTATGTGA
Ggtacgtaatagggagggctttgaagttcagagatggacactcttgtcta
aaagatctgtgcctcacccctctctgctcacaacgcccttttcctccctc
cctcctccctccctccctccctcccctccagCTGCTTCTCTCGTGGCTTC
TGCCTCTACCGTGGGCGCATGCCTTCATCCCCTCCCTCCCACCCGGCCTA
GACTTCGCAGGCTGTGTGGCCGATGTTCCCTTTCCTATGCTAGTAGGGCT
GGAGGGAGGGAGGGAGGGAGGGGGGAGGGGGAGGAAGGGTGGGTGCACTG
GGATGTTGACACAGGGGTGCTCGAGGGGTGGGGAGTGGAGGAGGAGCATG
AGAGGGAGCAAGGGATGTTGTGGCTGCTGGAGAGGGAGATGGAGAGGAGA
GTGACCCTGCCTTTGGCGGGGGTCATGCAGGCGCAGGCATTGAGGGAGGA
GGGATGGGAGGGAGCGGGCGAGGGAGAGGTGGGCCTTTGGAGGTCCTTGT
CGAGCCAGGTGCAGCAGATTTTTGCATCAACCACGGTCTCGGTCTTCCTA
GGTCCGCGCTCTTCGCCTCATAAGGAGATGGAGCAGCAGCAGCAGCAGCA
GCAGCAGCAGCAGCAGCAGCAGATTGAGAAAGTGAAGAGAAAGGGGGAGG
ATGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGGCAGTGGTGGT
GCTGCCTCAGCCTCGCCCTCGTCCTCATTCTCCTTCTTTTCCTCGCCCTC
CTTCATCTGTGGTTGGCTCAAACTCCTTCCTACCTCCTCCTCCTCTTCAT
TTGCCCACAGCGGCCACCACAGTAAAGAAAAGGAGGGAAGGACGGATGAC
GAAGAGGACGGAGAGCATGATATTGCCACTTCCGTTTCCTCTTCTTCTTC
CTCCTTGGCCCGCTCCTCGTCCTCCTCCCCTTCCTCGCCCTCCGACGTCC
TCCTTCTTTGGGCCGAGCTCGATAGCAGCCAGTTCCTCTTCTACCCTCCC
TCCGCCCTCCCTCCCTCCCGCCTGCCCCCCTCTTCCTCGTCCTCCTCCTC
CTCCTCCTTCCTTCCCTCATCCTCTTCCAGTTGCCCCCCCTCCCTCCCTT
CCGCCCTCCCCCTCCCCCTCCTCCGCCTGTCCCTGCGGTCGCTGACGGCG
CTTATCCCAGTCTTGAACGCCGAGCCCCTGGGGCTGGTCTTCGACTGTCA
CTTGGCCGGGGGAACGGAGCACTACCGGCTTTGTGCATCCACGGGCACAG
ACAGACAGGGCTGGATCAAGGGCTTTGAGCGGTTAAAGAGGAGCCAGAAT
CACAACCGCAAGCTCAGCGTCGTCAGCCACCAGAAAAAGAAGAACAAGAG
GAAGGGATGGCGGGAGGGCGGGGAGGATCCAATCGCCTGGGTAAGAAAGA
CAGTCATGGACTCGCAGgtgagcaaggtgtatatatatatatatatgcgt
ttaagattcccagattttatgtttgcgattccaattaatgattcttaaag
tgatgttagacgctccaatcgccctccctccctccctccctccctccctc
tccctccctcccgcagGGCATGGAGCTCCTCCTCAGCAAAAGCAAGGAGG
CACCTCTAGCCGCGAGCAGCCTATGTGAGGACGAGGGCGTGCTTGAGGCC
GTTTTCCAGGCCTTGGCCCGGGAGACCCCTCCTCCCTCCCTCCCTCTCCT
CCTGGGGGCTATGCATGGAGTGTGGGAGGAAATGAGGTATAAAGGAAGTG
CAGGAGAGGAGGCGAAGGAGGGAAAGAAGGCGGACAGCGCTGTGGGAGAG
ACTGGAAGCAGTAGCAGCAGCGACAAGATTGGCATTAGCAGTAGTAGTAG
TAACCCCACCACCACCACCCCAAGCAGCAGCAGCAGCAGCAGCAGCAGCA
GTGGCGACAAACCTCGCTCTCACCGTCCAGCCCCCGCCACAATGGACGAA
CTTCTCAACCGCCTCTTCTCCTCCTCCTCCTCCTCCTCCTCCTTTTCCTC
CTCCTCCTCATCCTCTTCTTACACCTCCAGCGTGTCTTCCCGCCCCCCAT
ATCTCCCTTCCTCCCTCACCACCTGCCGCCTTGATCTCTTCAACGGCAGC
CTCAACATCTCCTCATCCTCTTCCGTCCCTCCCTCCATCTCTCCCTCCCT
CCAAGCCGCGTTTGAGGAGGTGGCCACTGTCTGGGCTCCTCGTCACTCTT
CCCTCTCCACCTCCCGCGCTTCTCAGgtaagacctccttcacacactcct
tccctctttttctttctccctctcctcgatccttcctgcgcttcgtctgt
cccatatctttttccttcgctcaggatcgcagaggggcgttcttcctcct
tttgtgacaccctcctatgcgctaatagaaagtacgtcttttcccttttg
catttcttttcacttgacaattctctcgtcctccctccctccttccttgc
ctcccctagGCATCCAACGCCCGCACCCGCAGCATCAGCACCATGCGCTG
GAAGCCTTCCCCCTCGACCTCCTCCCCTCCCTCCCTCCCTTTCCCCCCAT
CCTCCAGCCCCGGGATTAGGAAGAGGGCGAAGACGACGGCAGGGATGGCA
GTCAAGGGGCTCGTGGCTAAGTGGCGGCAGTACCAGGAGCCGgtgtgtga
cctctgccctccctccctcgttccttccacccctctctctgcatcatctg
tggcttataaattttgtttactcgactcttctgcccctctctctctcccc
tttgtcccttcctccttcctctttcagCCTATGGCCTCTGCCCTCGTGCT
TGCCGCCCAGCCCGCCCCTCCCCTTTCCCCAGTCCGCCCTGCCCCCCCTC
CCTCCCCCTCCTCCTCATCGCCCTCGTCCTCGTCCGCACCCTCGACGAGC
CTTCTCTTCCCCGCGCTTCACAAGGCTGCCACTCGTCTAAGGGAAAAAAT
GAAGGAAGGGAAGGAGGGAGGTGGAGTTGAGGCGGTCAGAGAGGGAGAGA
AGGGAGTGATTGTAGAAGAAGAGGAGGAAGGGGGACAGGAGAAAGAGCGA
GTACAGGAGGCCCCCTTCTCCCACTACCAGCAGCGAAGGCATCAAGAGAA
AGACCACCACCAGCAGCAGCAGCAGCAGCAGCAGCAGCAACGCGCCGCCC
ACGCCCTCCTCCTGTCCTCTCTACTCGAGAAGCAGGGCTTGGCCACCCAA
GCCCTCGGAGCTCTCTCCCCCCACCCTCCCTCCTTCTCTCCTTCCCTCCC
TCCCTCCATTTTTCTGACTCTCAACAGACCCAGGATCTACCGGCTTTTGC
GGCTAGCCTTCAGGCAGGAACTCGgtaagcctccttccctgcttccctcc
ctgcctccctctctccctcctaactccttttgcctcgctgacactcaagc
tggaacacgttacctcctccctccctccctcattccttcccttctcccca
gCCACGTCCTCCTGGCACGATGCCCTTCACTCCCTTACGCTCGGGGTGGG
GGCAGGGTGGGTTGGAGCCGAGGGGCTCAAGGCCTTTGCTCTCGGCGCGG
CCGTGTGGCACCTGCAGCAGCAGCAGCAGCAGAAGCAGGAGAAAGAAAAG
GGGGATGGAGAAATTAAGGGAGGAAGGAAAGAAGGGAgtaagggacgcag
cagcagtggcagcaaaaagcatttgtctttctcccggaccctaagacgac
aaggctcttcttcctcctcctcatccttctccttctccccctctgtagcc
cttcacctcctacggcgtgctggctcctccaccctatcctcctcttcgtc
ctccctgtcttctcccttctcctcctccctgggtttctgcgacagccctt
cttctaagCCCGCCTATACCCTCCTCCCCCCCCTCCCTCCTCCTCCTCTT
CCTCCTCCTCAACCTTCTTGAACCGTCACCATCCTTCCCAGGGCACTCTG
CTCGTCCTCAACAgtacgtctccttccttccctccctccctcctctcctt
gttccctttaaaagtgccatccactcgctaaactactccctccctccctc
cctccgtccggccctccctccttcactcccttcttaattagATAAAGCCC
GCTGGACACGCCTCCCCAATCCCTCTCAGAGCCCTCTAGACCTGGTCGCT
GATCTTCTCGATCGCCTCCTCGCTCTTGTCAAGACGCACGCAGCTCCTTC
GAAGGACGgtacgcccctccctccttccctcccctccttccctcccctcc
cctcccttcctgcttcctcctctccctcagacacgagcaccaagaaccct
ctcatttcttttccccacccccctccctccctccttttctccctccctcc
cttcaccgctcagATCCAGGCTCGTATTCCCTAGGTCCTGTCGAGCTGGG
CAGCATCAAGGCCTCTGCTGGCTACGGTCTGTTCGAGGCATACACGTCAC
AGgtgcactctctttccctccctccctccctccctccctccctccttccc
tacccccctctctctgtcctgtttccctgccgtctctccctccgtcccac
tccctcctgcgtacttttcgcacctttcatccgtcttcctcttcctcctt
ccttccctccctccctccctcatctctagCTCTTGCTTTTGGACCTTGAG
ACAGCCAGCGACAAACAGTCCTTCGATCTCCTGgtaaggagaggaaagga
gggagggaggaaaaaaggaaggaagaaaaggatagagaggggaaatccta
gctcctcatagcgttctttccttcatagcatcacgtaccctccctcattc
cctctctctctttttgttccccttgagtatagGAAGGGGAGGACGAGGAG
GACGATCTAGCCCGCCTGGCCTTCCTCCTGACCCTTCACAACCTCCTCTC
CCTGCACGGCCTCATCGATCACTCCCCCAGCTGGCCCACTGACAGCACCA
CAACCAGCGCCACCACCACCACAATGGACAACAACAACCACACCAgtggc
ggcaccagcagccgcgttccatccctccctccctccctttctccatctct
cgtcccgccctcgaccaaacaacgcgaggcggccctcgctgactttcagG
CTCGGCAACGAAGCGCACGCTACAGGGTGGGGGGGGGGAGGGCGGGGGTG
GCATTACCATAACGCCTGCCTACATCGAGCATCGGCTATTGCGAAGTGCG
GTGTCCGGAGGAGGTTTTCGTCTCTTCCCCTCCTCCATCGCTCGCTATTT
TTCATCATCATCCTTCCCATCCTCTTCCTTGCCCTTATCCTCCTCCTCCC
CCTCATCCTCCTCCTTCCTCTCCCCCTTCTCGTCCACCTCCTCCTTCACC
ACCACTACCTCCTTCTCCTCCTCGTCTCCCTACTCTCCTCCCGTGTTGGA
GGAAGACCCTAGCAACTTGAACCTCCTCCCGCCCCTTCCTTCCCTTCCTC
CCTCCCTTCCTTCCCCCCTCAAGCCCAAGCAGCTCGCCCTCCGTTCCTCT
CATCCCCTCCTTTTATTCGCCCTCTCCTACGGCACTGACGCCTCGCCCTT
CATTACGTCCTATCGGTGTCCTTCCTCCCTCCCTCTCTCCCTCCGCCAGC
AGGCGCGAACCTTTATTTTGCGAAACGTGAGGGTGACAAGGGAGGGAGGG
AGGGCAGTGTTGGTGCTGCCAGAACTGCTGCAGGTGCACTGGCAAGAGTT
TGGAAGTGACTTGGCAACGGCTCTGAGGGAGGTCTGGAGGCAGGTTGAGG
AAGAGGGGGAGGGAGAGAGGAAGGCCGGGAGAGGTCGAGGTGGAAGGGGG
ATGGGGAGGAGGAAGGCCGGGAGGGAGGAGGAACAGCTGTGGCAGCAGCA
GCAGGAGGCGTGGGAGAAGTTGAAGAATGAGGTGGAGGAGGTTTTGAGTG
GTGGGAAGGAGGGAAGGAAGGGGAGTAGGAAGGCGTTGTGGAAGAGGGTG
GAGTTTGTGCCGGATGACCATACTTGTTGCCAGCTGCGGTTCTAG
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protein sequence of NO29G00070.1

>NO29G00070.1-protein ID=NO29G00070.1-protein|Name=NO29G00070.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1351bp
MLWLLEREMERRVTLPLAGVMQAQALREEGWEGAGEGEVGLWRSLSSQVQ
QIFASTTVSVFLGPRSSPHKEMEQQQQQQQQQQQQQIEKVKRKGEDAAAA
AAAAAAAAGSGGAASASPSSSFSFFSSPSFICGWLKLLPTSSSSSFAHSG
HHSKEKEGRTDDEEDGEHDIATSVSSSSSSLARSSSSSPSSPSDVLLLWA
ELDSSQFLFYPPSALPPSRLPPSSSSSSSSSFLPSSSSSCPPSLPSALPL
PLLRLSLRSLTALIPVLNAEPLGLVFDCHLAGGTEHYRLCASTGTDRQGW
IKGFERLKRSQNHNRKLSVVSHQKKKNKRKGWREGGEDPIAWVRKTVMDS
QGMELLLSKSKEAPLAASSLCEDEGVLEAVFQALARETPPPSLPLLLGAM
HGVWEEMRYKGSAGEEAKEGKKADSAVGETGSSSSSDKIGISSSSSNPTT
TTPSSSSSSSSSSGDKPRSHRPAPATMDELLNRLFSSSSSSSSFSSSSSS
SSYTSSVSSRPPYLPSSLTTCRLDLFNGSLNISSSSSVPPSISPSLQAAF
EEVATVWAPRHSSLSTSRASQASNARTRSISTMRWKPSPSTSSPPSLPFP
PSSSPGIRKRAKTTAGMAVKGLVAKWRQYQEPPMASALVLAAQPAPPLSP
VRPAPPPSPSSSSPSSSSAPSTSLLFPALHKAATRLREKMKEGKEGGGVE
AVREGEKGVIVEEEEEGGQEKERVQEAPFSHYQQRRHQEKDHHQQQQQQQ
QQQRAAHALLLSSLLEKQGLATQALGALSPHPPSFSPSLPPSIFLTLNRP
RIYRLLRLAFRQELATSSWHDALHSLTLGVGAGWVGAEGLKAFALGAAVW
HLQQQQQQKQEKEKGDGEIKGGRKEGTRLYPPPPPPSSSSSSSSTFLNRH
HPSQGTLLVLNNKARWTRLPNPSQSPLDLVADLLDRLLALVKTHAAPSKD
DPGSYSLGPVELGSIKASAGYGLFEAYTSQLLLLDLETASDKQSFDLLEG
EDEEDDLARLAFLLTLHNLLSLHGLIDHSPSWPTDSTTTSATTTTMDNNN
HTSSATKRTLQGGGGEGGGGITITPAYIEHRLLRSAVSGGGFRLFPSSIA
RYFSSSSFPSSSLPLSSSSPSSSSFLSPFSSTSSFTTTTSFSSSSPYSPP
VLEEDPSNLNLLPPLPSLPPSLPSPLKPKQLALRSSHPLLLFALSYGTDA
SPFITSYRCPSSLPLSLRQQARTFILRNVRVTREGGRAVLVLPELLQVHW
QEFGSDLATALREVWRQVEEEGEGERKAGRGRGGRGMGRRKAGREEEQLW
QQQQEAWEKLKNEVEEVLSGGKEGRKGSRKALWKRVEFVPDDHTCCQLRF
*
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Synonyms
Publications