NO29G00050, NO29G00050 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO29G00050 vs. NCBI_GenBank
Match: EWM23246.1 (hypothetical protein Naga_101622g1 [Nannochloropsis gaditana]) HSP 1 Score: 328.6 bits (841), Expect = 2.300e-86 Identity = 157/309 (50.81%), Postives = 201/309 (65.05%), Query Frame = 0 Query: 19 VSKMGHIKT--TWPAIVIFVSLVVFLSDGQKFFKVYSSNAPAIPSSFLGDLESGD---FQLAFDESAGYFDDIRESDWKLIKARINNTPNCASECEPEEPPTWYQNNWEPAISCQHERRIGALGDGGKWVCDPHRILNK--PSKSCLVYSIGSNNEFTFEKAIRRDISSECEVHTFDPTVGNHPSNLPKNENITFHPWGLGATNQGAYKNLNTIINELGHAGKEIDIFKIDCEGCEFETVRSWFGDGSVAIRQILLEIHKGTEGAQPPPTQELMLFLESKGFVIFHKEPNIQYGGGLCIEYAFLRLRPP 321 + + G IKT IV+ +L +F + Y+S ++ L + D F++A + S G+FDDIR++ WK + RI TP+CA+ C E WYQNNWEP +C ERRIG GDGGKWVCDP RI+ K CLVYS+GSNN+F+FE++I RDIS CE+HTFDPT+G+ P+ +E ITFHPWGL N G YK L TI+ +L H +EIDI KIDCEGCE+ + SW D + IRQIL+E+H+GTEGA P P + M L +GFVIFHKEPNIQ+ GG CIEYAF+RL P Sbjct: 1 MKEAGKIKTIVVQGVIVVLAALCLFWTMN------YASAQVSLEKKGNSQLRTSDISPFKMAMEGSEGFFDDIRDAGWKRLMERIQTTPSCAASCAAEPAAHWYQNNWEPNFTCLDERRIGRWGDGGKWVCDPRRIVAKAEAGHGCLVYSVGSNNDFSFEESILRDISPACEIHTFDPTIGDRPAKPLTDEQITFHPWGLSNKNDGKYKTLQTIMQDLDHGNREIDILKIDCEGCEWSSYESWL-DKGIRIRQILIELHQGTEGATPVPAMKFMESLSQRGFVIFHKEPNIQWAGGACIEYAFVRLASP 302
BLAST of NO29G00050 vs. NCBI_GenBank
Match: EWM23245.1 (hypothetical protein Naga_101786g1 [Nannochloropsis gaditana]) HSP 1 Score: 318.5 bits (815), Expect = 2.300e-83 Identity = 150/294 (51.02%), Postives = 194/294 (65.99%), Query Frame = 0 Query: 33 VIFVSLVVFLSDGQKFFKV-YSSNAPAIPSSFLGDLESGD---FQLAFDESAGYFDDIRESDWKLIKARINNTPNCASECEPEEPPTWYQNNWEPAISCQHERRIGALGDGGKWVCDPHRILNK--PSKSCLVYSIGSNNEFTFEKAIRRDISSECEVHTFDPTVGNHPSNLPKNENITFHPWGLGATNQGAYKNLNTIINELGHAGKEIDIFKIDCEGCEFETVRSWFGDGSVAIRQILLEIHKGTEGAQPPPTQELMLFLESKGFVIFHKEPNIQYGGGLCIEYAFLRLRPP 321 ++ ++V L+ F+ V Y+S ++ L + D F++A + S G+FDDIR++ WK + RI TP+CA+ C E WYQNNWEP +C ERRIG GDGGKWVCDP RI+ K CLVYS+GSNN+F+FE++I RDIS CE+HTFDPT+G+ P+ +E ITFHPWGL N G YK L TI+ +L H +EIDI KIDCEGCE+ + SW D + IRQIL+E+H+GTEGA P P + M L +GFVIFHKEPN GG CIEYAF++L P Sbjct: 27 IVVQGVIVVLAALCLFWTVNYASAQVSLEEKGNSQLRTSDISPFKMAMEGSEGFFDDIRDAGWKRLMERIQTTPSCAASCAAEPAARWYQNNWEPNFTCLDERRIGRWGDGGKWVCDPRRIVAKAEAGHGCLVYSVGSNNDFSFEESILRDISPACEIHTFDPTIGDRPAKPLTDEQITFHPWGLSNKNDGKYKTLQTIMQDLDHGNREIDILKIDCEGCEWSSYESWL-DKGIRIRQILIELHQGTEGATPVPAMKFMESLSQRGFVIFHKEPNTLGCGGRCIEYAFVKLASP 319
BLAST of NO29G00050 vs. NCBI_GenBank
Match: XP_005855704.1 (hypothetical protein NGA_0645500 [Nannochloropsis gaditana CCMP526] >EKU20656.1 hypothetical protein NGA_0645500 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 317.4 bits (812), Expect = 5.200e-83 Identity = 142/249 (57.03%), Postives = 174/249 (69.88%), Query Frame = 0 Query: 74 LAFDESAGYFDDIRESDWKLIKARINNTPNCASECEPEEPPTWYQNNWEPAISCQHERRIGALGDGGKWVCDPHRILNK--PSKSCLVYSIGSNNEFTFEKAIRRDISSECEVHTFDPTVGNHPSNLPKNENITFHPWGLGATNQGAYKNLNTIINELGHAGKEIDIFKIDCEGCEFETVRSWFGDGSVAIRQILLEIHKGTEGAQPPPTQELMLFLESKGFVIFHKEPNIQYGGGLCIEYAFLRLRPP 321 +A + S G+FDDIR++ WK + RI TP+CA+ C E WYQNNWEP +C ERRIG GDGGKWVCDP RI+ K CLVYS+GSNN+F+FE++I RDIS CE+HTFDPT+G+ P+ +E ITFHPWGL N G YK L TI+ +L H +EIDI KIDCEGCE+ + SW D + IRQIL+E+H+GTEGA P P + M L +GFVIFHKEPN GG CIEYAF+RL P Sbjct: 1 MAMEGSEGFFDDIRDAGWKRLMERIQTTPSCAASCAAEPAARWYQNNWEPNFTCLDERRIGRWGDGGKWVCDPRRIVAKAEAGHGCLVYSVGSNNDFSFEESILRDISPACEIHTFDPTIGDRPAKPLTDEQITFHPWGLSNKNDGKYKTLQTIMQDLDHGNREIDILKIDCEGCEWSSYESWL-DKGIRIRQILIELHQGTEGATPVPAMKFMESLSQRGFVIFHKEPNTLGCGGRCIEYAFVRLASP 248
BLAST of NO29G00050 vs. NCBI_GenBank
Match: CEL99428.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 194.5 bits (493), Expect = 5.100e-46 Identity = 115/279 (41.22%), Postives = 157/279 (56.27%), Query Frame = 0 Query: 72 FQLAFDESAGYFDDIRESD---WKLIKA------RINNTPNCASECE--PEEPPTWYQNNWEPAISCQHERRIGALGDGGKWVCDPHRILNK---PSKSCLVYSIGSNNEFTFEKAIRRDISSECEVHTFDPTVGNHPSNLPKNENITFHPWGLGATNQGA----------YKNLNTIINELGHAGKEIDIFKIDCEGCEFETVRSWFGDGS----VAIRQILLEIHK-GTEGAQP-PPTQELMLFLESKGFVIFHKEPNIQYGGGLCIEYAFLRLRPP 321 F L +ES G++D + S+ W+L K PN S+ T+YQ +EP SC+ E R+G LGDGGKWVCDP RI+++ K CLVYS+G +NE++FE ++ + + CEVHTFD TV + K E+I FH WG+ +GA LN II LGH +EIDIFKID EG EF+++ G+ IRQ+L+E+H G Q +EL+ + G+V+FHKEPNIQY GG C+E+AFL+L P Sbjct: 136 FALMAEESLGFYDASQYSEAQRWELKKRNRAVMWHRQMDPNWLSKISLVRGHGATFYQMFFEPDWSCEFEMRLGTLGDGGKWVCDPDRIISRSKASGKPCLVYSVGGSNEWSFEDSVYKTLG--CEVHTFDHTVATPKA---KPEHINFHRWGIDQPGRGASLQADNPGPLTAGLNEIITALGHENREIDIFKIDVEGAEFKSLTPLLTSGAWRKKPPIRQVLIEVHVFGNHQQQAVEMNKELLSAFLNNGYVMFHKEPNIQYAGGNCVEFAFLQLDLP 409
BLAST of NO29G00050 vs. NCBI_GenBank
Match: CEM12199.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 188.7 bits (478), Expect = 2.800e-44 Identity = 106/272 (38.97%), Postives = 153/272 (56.25%), Query Frame = 0 Query: 78 ESAGYFDDIRESD---WKLIKA------RINNTPNCASECEPEEPPTWYQNNWEPAISCQHERRIGALGDGGKWVCDPHRILNKPSKS---CLVYSIGSNNEFTFEKAIRRDISSECEVHTFDPTVGNHPSNLPKNENITFHPWGLGATNQGA----------YKNLNTIINELGHAGKEIDIFKIDCEGCEFETVRSWFGDGS----VAIRQILLEIHKGTEGAQP--PPTQELMLFLESKGFVIFHKEPNIQYGGGLCIEYAFLRLRPPL 322 ES G++D + ++ W+L K P S+ T+YQ ++P SC+ E R+G LGDGGKWVCDP RI ++ + S CLVYS+G +NE++FE ++ + + CEVHTFD TV + K E++ FH WG+ +GA LN II LGH +EIDIFKID EG EF+++ G IRQ+L+E+H + Q +EL+ + G+V+FHKEPNIQ+ GG C+E+AFL++ P+ Sbjct: 116 ESLGFYDSSQYTEAQRWELRKKNRAVMWHRQMDPKWLSKISGANGQTFYQMFFDPDWSCEFEVRLGTLGDGGKWVCDPDRIRSRSNASGEPCLVYSVGGSNEWSFEDSVHKTLG--CEVHTFDHTVAVPEA---KPEHVHFHRWGIDQPGKGANLKADDPGPLTAGLNEIITALGHESREIDIFKIDVEGAEFKSLTPLLTSGEWRKRPPIRQVLIEVHVYGDHQQQVVEMNRELLTAFLNNGYVMFHKEPNIQHAGGNCVEFAFLQMNLPI 382
BLAST of NO29G00050 vs. NCBI_GenBank
Match: CEM11087.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 185.3 bits (469), Expect = 3.100e-43 Identity = 109/273 (39.93%), Postives = 151/273 (55.31%), Query Frame = 0 Query: 78 ESAGYFDDIRESD---WKLIKA------RINNTPNCASECEPEE--PPTWYQNNWEPAISCQHERRIGALGDGGKWVCDPHRILNKPSKS---CLVYSIGSNNEFTFEKAIRRDISSECEVHTFDPTVGNHPSNLPKNENITFHPWGLGATNQGA----------YKNLNTIINELGHAGKEIDIFKIDCEGCEFETVRSWFGDGS----VAIRQILLEIHKGTEGAQP--PPTQELMLFLESKGFVIFHKEPNIQYGGGLCIEYAFLRLRPP 321 ES G++D R ++ W+L K PN S+ + PT+YQ +EP SC+ E R+G LGDGGKWVCDP RI+++ S CLVYS+G +NE++FE ++ + + CEVHTFD TV + K ++ FH WG+ GA LN II LGH +EIDI KID EG EF ++ G+ IRQ+L+E+H Q +EL+ + G+V+FHKEPNIQ+ GG C+E+AFL+L P Sbjct: 111 ESLGFYDAGRYTEAERWELKKRNRALMWHRQMDPNWLSKVSEVKGHGPTFYQMFFEPDWSCEFEMRLGTLGDGGKWVCDPDRIISRSKASGEPCLVYSVGGSNEWSFEDSVHKTLG--CEVHTFDHTVATPKA---KPNHVIFHRWGIDWPGSGANLQADSPGPLTAGLNEIITALGHETREIDILKIDVEGAEFRSLTPLLTSGAWRRRPPIRQVLIEVHVLGINKQKVVDLNKELLSAFLNNGYVLFHKEPNIQHAGGNCVEFAFLQLDLP 378
BLAST of NO29G00050 vs. NCBI_GenBank
Match: XP_001422352.1 (predicted protein [Ostreococcus lucimarinus CCE9901] >ABP00669.1 predicted protein [Ostreococcus lucimarinus CCE9901]) HSP 1 Score: 185.3 bits (469), Expect = 3.100e-43 Identity = 94/233 (40.34%), Postives = 133/233 (57.08%), Query Frame = 0 Query: 116 WYQNNWEPAISCQHERRIGALGDGGKWVCDPHRILNKPSKSCLVYSIGSNNEFTFEKAIRRDISSECEVHTFDPTVGNHPSNLPKNENITFHPWGLGATNQ---GAYKNLNTIINELGHAGKEIDIFKIDCEGCEFETVRSWFGDGSVAIRQILLEIHKGT---------------------------EGAQPPPTQELMLFLESKGFVIFHKEPNIQYG--GGLCIEYAFLR 317 WYQ+N EPA++C E R+G G+GGK +CDP+R+ + + L+YS+GS ++F+FE+AI RD+SS CE+H FD TV N P N P + F PWGLG + K+L ++ LGH G+ ID+ KIDCEGCE+ T SW D V + ++L+EIH GT + + P + L + F IFHKEPNI+Y +C+E+AF+R Sbjct: 104 WYQDNVEPAVTCAREERVGPAGEGGKCLCDPNRLRARGADG-LIYSVGSFDDFSFEEAIMRDVSSACEIHVFDHTVSN-PRNKPC--GVHFQPWGLGGAREPDGSDLKSLADVVVALGHKGRTIDVLKIDCEGCEWSTYGSWI-DADVRVDEMLVEIHAGTIDSNLKEVHQSWLSLIVGDQLFGRGALDPLREPVAKRFFRRLHDENFYIFHKEPNIKYSLLHKMCVEFAFIR 331
BLAST of NO29G00050 vs. NCBI_GenBank
Match: XP_001422281.1 (hypothetical protein OSTLU_93976, partial [Ostreococcus lucimarinus CCE9901] >ABP00598.1 hypothetical protein OSTLU_93976, partial [Ostreococcus lucimarinus CCE9901]) HSP 1 Score: 182.2 bits (461), Expect = 2.600e-42 Identity = 96/233 (41.20%), Postives = 131/233 (56.22%), Query Frame = 0 Query: 116 WYQNNWEPAISCQHERRIGALGDGGKWVCDPHRILNKPSKSCLVYSIGSNNEFTFEKAIRRDISSECEVHTFDPTVGNHPSNLPKNENITFHPWGLGATNQ---GAYKNLNTIINELGHAGKEIDIFKIDCEGCEFETVRSWFGDGSVAIRQILLEIHKGT---------------------------EGAQPPPTQELMLFLESKGFVIFHKEPNIQYG--GGLCIEYAFLR 317 WYQ+N EPA++C E R G G+GGK +CDP+R L CL+YS+GS ++F+FE+AI RD+SS E+H FD TV N P N P + FHP GLG + K L I+ LGH G+ ID+ KIDCEGCE+ T SWF D V + ++L+EIH GT + ++ P + + L + F IFHKEPNI+Y +C+E+A +R Sbjct: 82 WYQDNVEPAVTCAREERAGPAGEGGKGLCDPNR-LRAQGADCLIYSVGSFDDFSFEEAITRDVSSAREIHAFDHTVSN-PRNKPC--GVHFHPLGLGGAREPDGSDLKGLADIVVALGHKGRTIDVLKIDCEGCEWSTYGSWF-DADVRVDEMLVEIHAGTIDSNLNEIHQSWLSLIVGEQLFGRGALDPSREPVAKRFLRRLYDENFYIFHKEPNIKYSRLHKMCVEFALIR 309
BLAST of NO29G00050 vs. NCBI_GenBank
Match: EJK74669.1 (hypothetical protein THAOC_03642 [Thalassiosira oceanica]) HSP 1 Score: 179.9 bits (455), Expect = 1.300e-41 Identity = 95/231 (41.13%), Postives = 135/231 (58.44%), Query Frame = 0 Query: 116 WYQNNWEPAISCQHERRIG--ALGDGGKWVCDPHRILNKPSK---------SCLVYSIGSNNEFTFEKAIRRDIS-SECEVHTFDPTVGNHPSNLPKN-ENITFHPWGLG------------ATNQGAYKNLNTIINELGHAGKE-IDIFKIDCEGCEFETVRSWFGDGSVAIRQILLEIHKGTEGAQPPPTQELMLF---LESKGFVIFHKEPNIQYGGGLCIEYAFLRL 318 WYQNN+EP SC +E+R+G GDG KWVCDPHRI+ ++ C+VYS+GSN +FTFE +++++ CE H FD + ++ +PK + +FH WGLG N YK+L+ + EL H + IDIFKIDCEGCE++T R W + QIL+E+HK P +++ F LE +G++ FHKEPNIQ+ CIEYAF+++ Sbjct: 93 WYQNNYEPNFSCPYEKRVGIPMNGDGAKWVCDPHRIVGLAAERKKADPRHPGCVVYSVGSNGDFTFELGVQKEVGVGTCEFHIFD--IDSYEHRVPKELKRASFHHWGLGTAVKKGDVIPQRVNNGMRYKSLSDTVKELHHEKLDVIDIFKIDCEGCEWDTHRDWVSGKVPLMHQILVEVHKA-------PIDKVLNFFDSLEKEGYLRFHKEPNIQWSAD-CIEYAFVKV 313
BLAST of NO29G00050 vs. NCBI_GenBank
Match: XP_002296921.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED86649.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 177.6 bits (449), Expect = 6.400e-41 Identity = 106/294 (36.05%), Postives = 144/294 (48.98%), Query Frame = 0 Query: 68 ESGDFQLAFDESAGYFDDIRESDWKLIKARINNTPNCASECEP----------------EEPPTWYQNNWEPAISCQHERRIG--ALGDGGKWVCDPHRI--------LNKPS-KSCLVYSIGSNNEFTFEKAIRRDI-SSECEVHTFDPTVGNHPSNLPKN-ENITFHPWGLG--------ATNQGAYKNLNTIINELGHAGKE-IDIFKIDCEGCEFETVRSWFGDGSVAIRQILLEIHKGTEGAQPPPTQELMLFLESKGFVIFHKEPNIQYGGGLCIEYAFLRLRPPLRS 324 + G + A ES G+F DI W +K+ + N +P WYQNN+EP SCQ E+RIG GDG KWVCDPHRI L P+ C+VYS+GSN +F FE +++++ CE H FD GN+ +PK + +H WGL T Y L + LGH + ID+FKIDCE CE+ET + W G ++QI +E+H GA + E G++ FHKEPNIQ+ CIEYAF+++ S Sbjct: 60 DDGQYDTARSESFGFFYDIPNDHWNRLKSIYASHSNHVDPKQPLRFNPDFEGGDQRNWRSSAHAWYQNNYEPNFSCQFEKRIGQNMNGDGPKWVCDPHRIKRLAEERKLKDPNHPGCVVYSVGSNGDFNFEMGMQKELGEGVCEFHIFD--FGNYGGKVPKELKRAYYHQWGLAKQDPNVVTPTMGNKYYGLLDTVKLLGHDKLDVIDVFKIDCEKCEWETYQDWLAPGIPMLQQIQVEVH----GAPGQKALDFYDGFERAGYLRFHKEPNIQFNSD-CIEYAFIKVEKSFMS 346 The following BLAST results are available for this feature:
BLAST of NO29G00050 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO29G00050 ID=NO29G00050|Name=NO29G00050|organism=Nannochloropsis oceanica|type=gene|length=1780bpback to top protein sequence of NO29G00050.1 >NO29G00050.1-protein ID=NO29G00050.1-protein|Name=NO29G00050.1|organism=Nannochloropsis oceanica|type=polypeptide|length=326bpback to top Synonyms
Publications
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