NO29G00030, NO29G00030 (gene) Nannochloropsis oceanica

Overview
NameNO29G00030
Unique NameNO29G00030
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3162
Alignment locationchr29:10081..13242 -

Link to JBrowse

Properties
Property NameValue
DescriptionSignal peptide peptidase
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr29genomechr29:10081..13242 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0016021integral component of membrane
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0004190aspartic-type endopeptidase activity
GO:0004190aspartic-type endopeptidase activity
Vocabulary: INTERPRO
TermDefinition
IPR007369Peptidase_A22B_SPP
IPR006639Preselin/SPP
Vocabulary: Biological Process
TermDefinition
GO:0006508proteolysis
Homology
BLAST of NO29G00030 vs. NCBI_GenBank
Match: XP_005852561.1 (signal peptide peptidase [Nannochloropsis gaditana CCMP526] >EKU23271.1 signal peptide peptidase [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 491.1 bits (1263), Expect = 3.800e-135
Identity = 321/538 (59.67%), Postives = 330/538 (61.34%), Query Frame = 0
Query:   43 SFNALYLRPVPTPLQQQQQHPQIQQHTARGRPLAFWQRQVEEEVVDXXXXXXXXXXXKEAIRLQKILDKRLVLAAQALAEDWPVYLFLIGIQAIPVLAGGLVGGNFLFFWLTACTCVYLGAKRSSAVARAGEIFQAVTTRNA---------------------FAAPIAASVSLFGTYYLLKNQFDIATV-------------------------------------------------YQLMTTFFGGYCLRDVLISTLLFL-------------------------------------------------GELNNIKWVATALSGAVCATYLWGPAAAVXXXXXXXXXXXXXXXXXXXXXXXXAANFITSGIALQAQASIPIKSLKPALIFLTGLFLYDIYFVFLSPGGVMESVATSLEGPVKLLSPRAAAATAPGQYPFSILGLGDIVVPGLFVGLLKRIDEGVDGLGEKNTFFAAGMTGYGVGLLLTFLANILMHRGQPALLYIVPSLIAAALGTAAVTGRWEEVWGFNGEEAE 462
            SFNALYLR       ++ Q   +Q H AR RPLAFWQRQ EE  V            KEAIRLQKILDKRLVLAAQAL EDWPVYLFLIG+QAIPVLAGGLVGGNFLFFWLTACTCVYLGAKRSSAVARAGEIFQ                               P+ +                                                                      QLMTTFFGGYCLRDVLISTLL L                                                 GEL+ +K  AT LSG VCATYLWGPAAAV  XXXXXXXXXXXXX         AANFITSGIALQAQASIPIKSLKPALIFLTGLFLYDIYFVF SPGGVMESVATSLEGPVKLLSPRAAAATAPGQYPFSILGLGDIVVPGLFVGLLKRIDEG DGLG KNTFFAAGM GY +GLLLTF ANILMHRGQPALLYIVPSLIAAALGTAAVTGRWEEVW FN E  E
Sbjct:   41 SFNALYLR-------RKHQLAPLQPHRARARPLAFWQRQTEEREV-AEEAEEMSDDEKEAIRLQKILDKRLVLAAQALQEDWPVYLFLIGVQAIPVLAGGLVGGNFLFFWLTACTCVYLGAKRSSAVARAGEIFQVGVAGGGRERXXXXXXXXXXXXXQQVHHRGLPVRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPSVQLMTTFFGGYCLRDVLISTLLALGLGGSIQSFYAPPPKPIPARRGPFSXXXXXXXXXXXXXXXXPPLRDPDEGELDGLKLAATLLSGGVCATYLWGPAAAV--XXXXXXXXXXXXXFLGAISALLAANFITSGIALQAQASIPIKSLKPALIFLTGLFLYDIYFVFFSPGGVMESVATSLEGPVKLLSPRAAAATAPGQYPFSILGLGDIVVPGLFVGLLKRIDEGQDGLGTKNTFFAAGMGGYALGLLLTFSANILMHRGQPALLYIVPSLIAAALGTAAVTGRWEEVWTFNSEGGE 568          
BLAST of NO29G00030 vs. NCBI_GenBank
Match: EWM21213.1 (minor histocompatibility antigen [Nannochloropsis gaditana] >EWM21214.1 minor histocompatibility antigen [Nannochloropsis gaditana])

HSP 1 Score: 416.4 bits (1069), Expect = 1.200e-112
Identity = 258/362 (71.27%), Postives = 265/362 (73.20%), Query Frame = 0
Query:   43 SFNALYLRPVPTPLQQQQQHPQIQQHTARGRPLAFWQRQVEEEVVDXXXXXXXXXXXKEAIRLQKILDKRLVLAAQALAEDWPVYLFLIGIQAIPVLAGGLVGGNFLFFWLTACTCVYLGAKRSSAVARAGEIFQAVTTRNAFAAPIAASVSLFGTYYLLKNQFDIATVYQLMTTFFGGYCLRDVLISTLLFL-------------------------------------------------GELNNIKWVATALSGAVCATYLWGPAAAVXXXXXXXXXXXXXXXXXXXXXXXXAANFITSGIALQAQASIPIKSLKPALIFLTGLFLYDIYFVFLSPGGVMESVATSLEGPVKLLSPRAA 356
            SFNALYLR       ++ Q   +Q H AR RPLAFWQRQ EE  V            KEAIRLQKILDKRLVLAAQAL EDWPVYLFLIG+QAIPVLAGGLVGGNFLFFWLTACTCVYLGAKRSSAVARAGEIFQAVTTRNAFAAPIAAS+SLFGTYYLLKNQFDIATVYQLMTTFFGGYCLRDVLISTLL L                                                 GEL+ +K  AT LSG VCATYLWGPAAAV  XXXXXXXXXXXXX         AANFITSGIALQAQASIPIKSLKPALIFLTGLFLYDIYFVF SPGGVMESVATSLEGPVKLLSPRAA
Sbjct:   41 SFNALYLR-------RKHQLAPLQPHRARARPLAFWQRQTEEREV-AEEAEEMSDDEKEAIRLQKILDKRLVLAAQALQEDWPVYLFLIGVQAIPVLAGGLVGGNFLFFWLTACTCVYLGAKRSSAVARAGEIFQAVTTRNAFAAPIAASISLFGTYYLLKNQFDIATVYQLMTTFFGGYCLRDVLISTLLALGLGGSIQSFYAPPPKPIPARRGPFSXXXXXXXXXXXXXXXXPPLRDPDEGELDGLKLAATLLSGGVCATYLWGPAAAV--XXXXXXXXXXXXXFLGAISALLAANFITSGIALQAQASIPIKSLKPALIFLTGLFLYDIYFVFFSPGGVMESVATSLEGPVKLLSPRAA 392          
BLAST of NO29G00030 vs. NCBI_GenBank
Match: XP_005710376.1 (unnamed protein product [Chondrus crispus] >CDF40082.1 unnamed protein product [Chondrus crispus])

HSP 1 Score: 149.8 bits (377), Expect = 2.100e-32
Identity = 126/363 (34.71%), Postives = 181/363 (49.86%), Query Frame = 0
Query:  125 PVYLFLIGIQAIP-VLAGGLVGGNFLFFWLTACTCVYLGAKRSSAVARAGEIFQA--VTTRNAFAAPIAASVSLFGTYYLLK-NQFDIATVYQLMTTFFGGYCLRD----VLISTLLFLGELNNIKW-----VATALSGAV-CATYLWGPAAAVXXXXXXXXXXXXXXXXXXXXXXXXAANFITSGIALQAQASIPIKSLKPALIFLTGLFLYDIYFVFLSPGGVMESVATSLEGPVKLLSPR--AAAATAPGQYPFSILGLGDIVVPGLFVGLLKRIDEGV----DGLGEKNT-FFAAGMTGYGVGLLLTFLANILMHRGQPALLYIVPSLIAAALGTAAVTGRWEEVWGF----NGEEAEE 463
            P Y+ L+  QA+P +     V G+  +F  TA   + +G +R+       E FQ+  ++   A AAP AAS  LFG+Y LLK    +I  ++  +TTF G  CL++    V  S L   G  + + W     + TA    +  A    GPA A                          +N I  GI  +  + +   S   A   L GLF YDI++VF S   VM SVAT ++ P KLL PR  A  A++  +YP++ILGLGD+ +PG+FV L + +D  +     G  E ++ +F A +  YG GLL  F+AN+  H  QPALLY+VP+LI ++LG  +  G   EV GF      EE +E
Sbjct:   92 PFYVALVAAQALPFIFPHSGVAGDLTYFTTTAVAALIIGCRRAPL-----EPFQSQPISKTQAIAAPFAASTFLFGSYLLLKYTTVNIGAIFNGLTTFAGTLCLKEALDPVFHSALSLAGLQDLVLWQQNSPLPTAEGDNIEPARLSLGPALA-----SVAAIATTVAYLSHVEPTFVFSNMIALGICARVVSLVRPDSFVVAAGLLCGLFFYDIFWVFGSE--VMVSVATQIDSPGKLLFPRDVADVASSTVKYPYAILGLGDVCIPGIFVSLAQAMDSALVQVKKGASEGDSPYFVAAVAAYGAGLLSCFVANLTTHVAQPALLYLVPALILSSLGMGSARGELNEVIGFKVKTGAEETQE 442          
BLAST of NO29G00030 vs. NCBI_GenBank
Match: XP_005788170.1 (hypothetical protein EMIHUDRAFT_467353 [Emiliania huxleyi CCMP1516] >EOD35741.1 hypothetical protein EMIHUDRAFT_467353 [Emiliania huxleyi CCMP1516])

HSP 1 Score: 132.5 bits (332), Expect = 3.400e-27
Identity = 130/381 (34.12%), Postives = 176/381 (46.19%), Query Frame = 0
Query:  116 AAQALAEDWPVYLFLIGIQA-IPVLAGGLVG------GNFLFFWLTACTCVYLGAKRSSAVARAGEIFQAVTTRNAFAAPIAASVSLFGTYYLLK-NQFDIATVYQLMTTFFGGYCLRDVL-------ISTLLF------LGE------LNNIKWVATALSGAVCATYLWGPAAAVXXXXXXXXXXXXXXXXXXXXXXXXAANFITSG-IALQAQASIPIKSLKPALIFLTGLFLYDIYFVFLSPGGVMESVATSLEGPVKLL-SPRAAAATAPGQYPFSILGLGDIVVPGLFVGLLKRIDE-------GVDGLGEKNTFFAAGMTGYGVGLLLTFLANILMHRGQPALLYIVPSLIAAALGTAAVTGRWEEVWGFNGEEA 461
            A Q +  D   Y+ L  I A +P +    +G         L+F   A   VYLG KR       GE    +++R+A  AP+ AS  L G Y +LK  + D   VY+L    F      D+L       ++  LF      LGE      +N     A A+S AV A YL GP +                               T G ++L A A++        ++   GLF YD +FVF S   VM +VAT +E P K L +   A A A G+YPFS+LGLGD+VVPG FVGLL+ +D+       G +    + ++F  G+  Y  GLL TF AN L   GQPAL+YIVPSL+ +A+ TAA  G    +  F    A
Sbjct:   52 ATQVVRRDLGAYVGLTSIVALVPAVDWAGLGPETSNVARLLYFSAVALGSVYLGVKRQD----LGE-SSPISSRSAALAPLFASAVLGGLYAILKFTELDPGAVYRLAACLFALLATSDLLQPLLGLAVAGELFRPADDELGEEREAAVMNAGAAPAFAVSLAVVAAYLQGPLS-------------------------------TGGPLSLPAFAALNDSLGFGIVMTSLGLFCYDAFFVFKS--DVMLTVATQIEAPAKFLWAAVGAGADAGGRYPFSVLGLGDVVVPGAFVGLLRELDKEQGRAGGGSEEEAREASYFQVGLGAYAAGLLSTFAANYLTKSGQPALVYIVPSLLLSAVATAASRGELPSLLEFESPRA 394          
BLAST of NO29G00030 vs. NCBI_GenBank
Match: EJK65379.1 (hypothetical protein THAOC_13764 [Thalassiosira oceanica])

HSP 1 Score: 129.8 bits (325), Expect = 2.200e-26
Identity = 110/370 (29.73%), Postives = 166/370 (44.86%), Query Frame = 0
Query:  101 EAIRLQKILDKRL-------VLAAQALAEDWPVYLFLIGIQAIPVLAGGLVGGNFLFFWLTACTCVYLGAKRSSAVARAGEIFQAVTTRNAFAAPIAASVSLFGTYYLLKNQFDIATVYQLMTTFFGGYCLRDVLISTLLFLGELNNIKWVATALSGAVCATYLWGPAAAVXXXXXXXXXXXXXXXXXXXXXXXXAANFITSGI-----ALQAQASIPIKSLKPALIFLTGLFLYDIYFVFLSPGGVMESVATSLEGPVKLLSPRAAAATAPGQYPFSILGLGDIVVPGLFVGLLKRIDEGVDGLGEKNTFFAAGMTGYGVGLLLTFLANILMHRGQPALLYIVPSLIAAALGTAAVTGRWEEVWGFNGE 459
            E  RL+++  +RL       V  A  ++ED   Y  +  +Q +P+L  G +  + ++F+  A T VYLG ++ +      E  + V+  NA  AP+ AS S+ G Y LLKN  DI  +Y ++ T FG   + D+ +  L  L    +       L  A+   +    A A+                           FI S I                              YD ++VF S   VM +VAT +E PVK + P    A     Y FS+LGLGD+V+PGLFV L+ + DE ++   E  ++F   +  Y  GL   F AN +   GQPAL+Y+ PSL+ +AL  A+  G+  ++W F  E
Sbjct:   34 EEERLRRLRRERLAKIEAGEVRRANRVSEDKFAYALIFALQFMPLLGNGRL-ESLVYFYGVAVTTVYLGGRQETI-----EQAERVSKDNALFAPVFASASIGGLYLLLKNGIDITALYAVVVTLFGAISISDIGVPVLRNLIPGVDFANEEVPLPKAIVQKFKLDEADALPLDGLITLGLGLLCTAVYWSPLVMEQKFIASNILAXXXXXXXXXXXXXXXXXXXXXXXXXXXXYDAFWVFGS--DVMMTVATKVEAPVKFIFP----ADTVRDYNFSVLGLGDLVIPGLFVRLMAKADEALN--PENFSYFNTAVLAYAFGLGACFTANAIFQNGQPALIYLDPSLVGSALACASANGQVAQLWDFQEE 389          
BLAST of NO29G00030 vs. NCBI_GenBank
Match: CBJ30784.1 (minor histocompatibility antigen H13, putative [Ectocarpus siliculosus])

HSP 1 Score: 119.4 bits (298), Expect = 3.000e-23
Identity = 122/413 (29.54%), Postives = 167/413 (40.44%), Query Frame = 0
Query:  117 AQALAEDWPVYLFLIGIQAIPVLAGGLVGGNFLFFWLTACTCVYLGAKRSSAVARAGEIFQAVTTRNAFAAPIAASVSLFGTYYLLK-NQFDIATVYQLMTTFFGGYCLRDVLISTLLFLGELNNIKW-----VATALSGAVCATY------LWGPAAAVXXXXXXXXXXXXXXXXXXXXXXXXAANFITSGIALQAQASIPIKSLKPALIFLTGLFLYDIYFVFLSPGGVMESVATSLEGPVKLLSPRAAAATAPG-QYPFSILGLGDIVVPGLFVGLLKRIDEGVDG------------------------------------------------------------------LGEKNTFFAAGMTGYGVGLLLTFLANILMHRGQPALLYIVPSLIAAALGTAAVTGRWE 451
            A  + ED  VYL L  +Q +P L  G    +F++F L A + VYLG+KR        E    +T   AF AP AASVSLFG + LLK     +   YQ +TTF G      VL   L  +   N +       + T L+ A   T+      L   A                             N     I +Q+   I I +   A I LTGLF YDI++VF +   VM +VAT +E PVK L P   + T P  +YPFS+LGLGDIV+P  F  L++  D  ++G                                                                   G   ++F   +  Y +GL L F  N +   GQPALLY+ P+L+++A+ TA + G  E
Sbjct:   23 AALVEEDKNVYLGLFALQLLPSLLIGYKLASFVYFGLLAVSTVYLGSKRMDI---PDETRNPITAAQAFGAPFAASVSLFGVFALLKYTDISVGIAYQYLTTFLGVATSVSVLPPILRSVLPENVVNAPVSAPLDTVLAKAFPETWENDDQPLLDFAELAVLVSATTAAFVYVNPAVGLSAKFLIPNVFAWCIGMQSIGLISISTFPAAAILLTGLFCYDIFWVFGTE--VMMTVATKIEAPVKFLFP---SLTDPSKRYPFSVLGLGDIVIPATFCTLMRSFDIYLEGARQAEAAAARALLTEVANKNPIALWLDSILGTPVAQAGSGVSEASPKGIPPGGRLAAAGAAGAVGEAGGGRSYFDNSVAAYALGLGLCFTVNFVSKSGQPALLYLNPALLSSAILTAVLNGNGE 427          
BLAST of NO29G00030 vs. NCBI_GenBank
Match: KNH04079.1 (presenilin-like signal peptide peptidase [Perkinsela sp. CCAP 1560/4])

HSP 1 Score: 118.2 bits (295), Expect = 6.700e-23
Identity = 90/309 (29.13%), Postives = 147/309 (47.57%), Query Frame = 0
Query:  155 ACTCVYLGAKRS----SAVARAGEIFQAVTTRNAFAAPIAASVSLFGTYYLLKNQFDIATVYQLMTTFFGGYCLRDVLISTLLFLGELNNIKWVATALSGAVCATYLWGPAAAVXXXXXXXXXXXXXXXXXXXXXXXXAANFITSGIALQAQASIPIKSLKPALIFLTGLFLYDIYFVFLSPGGVMESVATSLEGPVKLLSPRAAAATAPGQYPFSILGLGDIVVPGLFVGLLKRIDEGVDGLGEKNTFFAAGMTGYGVGLLLTFLANILMHRGQPALLYIVPSLIAAALGTAAVTGRWEEVWGFNGEE 460
            A + ++ GA++S        +  E  + +T+  A  +PI AS  L   ++ LK    +  +  ++  +F   C+    ++T+L    L         L+G       W                                N +    AL       +K  + A++FL+ LFLYDIY+VF +  GVM  VA  ++GP+KL+ PR   ++   Q+ +++LGLGDIVVPG+F+ L+ R+D+  +  G +  FF   + GY +GLL TF    + H  QPALLY+VP++ ++    A  T R+ E W F  +E
Sbjct:   46 AVSSIFFGAQQSELFRQTADKGSEDIEHITSDAAKKSPIFASCMLISLFWALK-YLSVGKINYILAVYFA--CIGTFAVNTVL----LTITACPPNVLTGTSALVVAW---------------------YHFMFPHWITNNILGFSFALATIKRTHLKETQTAVLFLSLLFLYDIYWVFGT--GVMLDVALKIDGPIKLVVPRVMGSS---QFQYAMLGLGDIVVPGIFIALMHRMDKFSEREGRQTRFFTVALCGYILGLLTTFAVMRVFHTAQPALLYLVPAIFSSTGTYAYTTKRFMEWWNFVEQE 321          
BLAST of NO29G00030 vs. NCBI_GenBank
Match: OEU21469.1 (Peptidase_A22B-domain-containing protein [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 115.2 bits (287), Expect = 5.600e-22
Identity = 75/200 (37.50%), Postives = 101/200 (50.50%), Query Frame = 0
Query:  291 NFITSGIALQAQASIPIKSLKPALIFLTGLFLYDIYFVFLSPGGVMESVATSLEGPVKLLSPRAAAATAP--GQYPFSILGLGDIVVPGLFVGLLKRID----------------------EGVDGLGEKNT-FFAAGMTGYGVGLLLTFLANILMHRGQPALLYIVPSLIAAALGTAAVTGRWEEVWGFNGEEAEEGME 466
            N+I + IAL +   + ++S     + L GLF YD   VF S    M +VAT +E PVK L    A  T P  G+YPF +LGLGDIV+PG+F+ +L+  D                        +D   +  T +F  G+ GY VGL  TF+      +GQPAL YIVPSL+  +LGTAA      E+W + G  A    E
Sbjct:   27 NYIATAIALASLGQVALESYMAGALLLIGLFFYDALSVFQS--DTMITVATKIEAPVKFL---FAGTTLPEGGKYPFGVLGLGDIVIPGIFLAMLREFDIENCDVELMYDVNNDENEDNGAVSIDYFKDAQTPYFTNGLVGYAVGLSTTFIVLYSTGQGQPALFYIVPSLLITSLGTAASRNEVSELWSYEGARARGARE 221          
BLAST of NO29G00030 vs. NCBI_GenBank
Match: OQR93840.1 (aspartyl protease family A22B [Achlya hypogyna])

HSP 1 Score: 114.8 bits (286), Expect = 7.400e-22
Identity = 113/365 (30.96%), Postives = 175/365 (47.95%), Query Frame = 0
Query:  127 YLFLIGIQAIPVLAGGLVGGNFLFFWLTACTCVYLGAKRSSAVAR----AGE-IFQAVTTRNAFAAPIAASVSLFGTYYLLKNQFDIATVYQLMTTFF---GGYCLRDV---LISTLLFLGELNNIKWVATA---------LSGAVCATYLWGPAAAVXXXXXXXXXXXXXXXXXXXXXXXXAANFITSGIALQAQASIPIKSLKPALIFLTGLFLYDIYFVFLSPGGVMESVATSLEGPVKLLSPRAAAATAPGQYPFSILGLGDIVVPGLFVGLLKRID----EGVDGLGEKNTFFAAGMTGYGVGLLLTFLANILMHRGQPALLYIVPSLIAAALGTAAVTGRWEEVWGFNGEEAEEGMEGA 468
            Y  L+G+ AI      LV  N     ++A + VY+G+  S  + +    AGE   +A+T  +A+  P+  S  L G Y L K  FD   V  L+T++F   G Y L +    +++ L F     + K              ++ + C T +   A A                           N     ++++   S+ + S K   I L GLF YDI++VF +   VM +VAT  +GP+KLL PR A ATA  +  FSILGLGDIV+PG+FV LL R D    + + G      +F   +  Y +GL+ T +  ++ +  QPALLY+VP+ + ++L T  V G  +E+  ++ E+ EE  + A
Sbjct:   10 YAALVGLTAISSFV--LVPVNVQLI-VSATSIVYIGSTLSLKLKQKRDAAGEKNDEAMTKEDAYMFPLVGSGMLLGLYLLFK-FFDKDLVNLLLTSYFALIGTYSLTEAFSPIVAALAFPATERHFKRTINIPYFGPQTLDVTPSWCTTGVLAAAFAAAWFQTKHFVLN---------------NIFGISLSIKGIESLSLGSYKVGAILLCGLFFYDIFWVFGT--DVMVTVATKFDGPIKLLFPR-AFATATEKAKFSILGLGDIVIPGIFVALLLRFDATRAKALQGDDFPKPYFHVNILFYVLGLVATVVVMVVFNAAQPALLYLVPACLGSSLVTGLVRGELKELLAYSEEDEEEPKKAA 352          
BLAST of NO29G00030 vs. NCBI_GenBank
Match: XP_008612858.1 (hypothetical protein SDRG_08739 [Saprolegnia diclina VS20] >EQC33635.1 hypothetical protein SDRG_08739 [Saprolegnia diclina VS20])

HSP 1 Score: 114.0 bits (284), Expect = 1.300e-21
Identity = 110/335 (32.84%), Postives = 166/335 (49.55%), Query Frame = 0
Query:  153 LTACTCVYLGAKRSSAVAR----AGE-IFQAVTTRNAFAAPIAASVSLFGTYYLLKNQFDIATVYQLMTTFF---GGYCLRDV---LISTLLFL-GELNNIKWVATALSGA--VCATYLW---GPAAAVXXXXXXXXXXXXXXXXXXXXXXXXAANFITSGIALQAQASIPIKSLKPALIFLTGLFLYDIYFVFLSPGGVMESVATSLEGPVKLLSPRAAAATAPGQYPFSILGLGDIVVPGLFVGLLKRIDEGV-----DGLGEKNTFFAAGMTGYGVGLLLTFLANILMHRGQPALLYIVPSLIAAALGTAAVTGRWEEVWGFNGEEAEEGME 466
            ++A + VY+GA  S  + +    AGE   +A+T  +A+  P+  S  L G Y L K  FD   V  L+T++F   G Y L +    L+  + F   E +  + +A    GA  +  T  W   G  AA+                          N     ++++   S+ + S K   I L GLF YDI++VF +   VM +VAT  +GP+KLL PR A ATA  +  FSILGLGDIV+PG+FV LL R D  +      G      +F   +  Y +GL+ T +  I+ +  QPALLY+VP+ + ++L TA   G  +E+  ++ E+ EE  +
Sbjct:   40 ISATSIVYIGATLSLKLKQKRDAAGEKNDEAMTKEDAYMFPVVGSCMLLGLYILFK-FFDKDMVNLLLTSYFALIGTYSLTEAFSPLVRAVAFSETERHYKRSIALPYFGAHVLDVTPSWCVTGVLAALFAAAWFQTKHFVLN------------NIFGISLSIKGIESLSLGSYKVGAILLCGLFFYDIFWVFGT--DVMVTVATKFDGPIKLLFPR-AFATATEKAKFSILGLGDIVIPGIFVALLLRFDAHMAKATTAGDAFPKPYFHINILFYVLGLVATVVVMIVFNAAQPALLYLVPACLGSSLLTALARGELKELLAYSEEDEEESKD 358          
The following BLAST results are available for this feature:
BLAST of NO29G00030 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_005852561.13.800e-13559.67signal peptide peptidase [Nannochloropsis gaditana... [more]
EWM21213.11.200e-11271.27minor histocompatibility antigen [Nannochloropsis ... [more]
XP_005710376.12.100e-3234.71unnamed protein product [Chondrus crispus] >CDF400... [more]
XP_005788170.13.400e-2734.12hypothetical protein EMIHUDRAFT_467353 [Emiliania ... [more]
EJK65379.12.200e-2629.73hypothetical protein THAOC_13764 [Thalassiosira oc... [more]
CBJ30784.13.000e-2329.54minor histocompatibility antigen H13, putative [Ec... [more]
KNH04079.16.700e-2329.13presenilin-like signal peptide peptidase [Perkinse... [more]
OEU21469.15.600e-2237.50Peptidase_A22B-domain-containing protein [Fragilar... [more]
OQR93840.17.400e-2230.96aspartyl protease family A22B [Achlya hypogyna][more]
XP_008612858.11.300e-2132.84hypothetical protein SDRG_08739 [Saprolegnia dicli... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL064nonsL064Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR079ncniR079Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR081ngnoR081Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK008386NSK008386Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO29G00030.1NO29G00030.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|674833gene_10467Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100429g4gene9211Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO29G00030.1NO29G00030.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO29G00030 ID=NO29G00030|Name=NO29G00030|organism=Nannochloropsis oceanica|type=gene|length=3162bp
ATGCTGTCTCCTGGCACTTGTACGGCTTTTCAGATACCGTCTTGCTTCTC
CTCCTCTCGCTGGGTAAACCCCTCGTCTTCGTCCTCTTCCGTGTTTCCTG
CTGCCGCTTCATCCCCTCTCGCCCCCTCGTTCAACGCCCTCTACTTGCGG
CCCGTGCCCACTCCCTTACAGCAGCAGCAACAACACCCGCAGATTCAGCA
GCACACGGCTCGCGGCCGCCCCTTGGCGTTTTGGCAACGGCAGGTGGAGG
AGGAAGTGGTGgtacgtacggcggacaggcgagggaaggagggagggagg
gaggagggaggggagggagggatgtgcgtaagacctcacagttgcgctcg
atcgacttaagcaacttaagggcaggtcttgaactcgatggccaatggaa
tcaccgggccctgacttgcttcactcaattttctcagccatggtgacccc
aaacaaatagccagctatcgtgaacttcggttttcacgcgccctccttca
cttccctattcatagGATGTCGAGGAGGAAGAAGAAATGAGCGACGACGA
GAAGGAAGCCATTCGACTCCAAAAGATCTTGGACAAGCGCCTCGTCCTGG
CTGCTCAAGCGCTTGCTGAAGACTGGCCTGTCTATCTTTTCCTCATTGGC
ATCCAGGCGATCCCGGTGCTGGCGGGCGGgtaaggagggaggcagggagg
gagggagggagggagatatggagtatgaaggatgacggggagtgatggcc
tgtctctgtctttcccattcgcatccaagccaaaccgatgcaggggcccg
ggtgagaagtgaaaaagagagagggatggggagagttatgtcgtagcaga
ccactacaaaggttctcacgcgtgtccctccctccctccctccctccctc
cctccctccctctgttcctccctccctccctcctcagCCTCGTGGGTGGA
AACTTCCTCTTCTTCTGGCTGACGGCGTGCACTTGTGTCTATCTGGGTGC
CAAACGCAGCAGCGCCGTGGCCCGGGCCGGGGAGATCTTTCAGgtatgac
ctgcgacttcccctcccaccctccctcctcgcccgctaccctaactcatc
atcacccaacacgtatcctcccccaatgccccccctcttactcccctaaa
gGCTGTGACCACCCGTAACGCCTTTGCTGCCCCTATCGCTGCCTCCGTGT
CCCTTTTCGGGACGTACTACCTCCTCAAAAACCAGTTCGACATCGCCACA
GTCTACCAGgtgggcctcatccctccctcctcactccctccttccttctc
tccttctctcccctccactctctctaactctccaccacccctccctccct
ccctccctagCTCATGACCACTTTTTTCGGGGGCTACTGCCTACGCGACG
TGCTCATCTCCACGCTCCTCTTCCTTGgtctcggcaacaccatcgactcc
ttcctcgcccccccccccctcccctcacctcccctcccaccacccgccga
agcctctttttccctcccaccaacgctgcgactgctgcgcctccttcccc
cccctccccttctccctcgtcttctttccccctcctccgcgacccggaag
aagGTGAACTCAACAACATCAAGTGGGTGGCCACGGCCCTCTCTGGTGCC
GTCTGTGCGACCTACTTGTGGGGCCCAGCGGCAGCAGTAGCAGCAGCAGG
AGCAACCGGAGCAGCAGGAGgtaaggctttccccctccctccctccctcc
atcccccctccctccctcatcatctctttgtcagggacctcttgtgggtc
gttttccccctcctcgtggcacacacacccttgaatccctccctccctcc
cttcctccctccctccttccctccctccctccttctcactctctcctctt
cgctcgaacggcagtcggcctccgtgggtacctcccgtgtcgtgcctccc
acctggcctcacttctccccctccctccctccctccctccctccgtccct
ccctccttccctccctttctccccttctccattccttaccagCGGGCAGC
GTGGCCTTTGTGGGCGCCATCAGTGCGCTGCTGGCCGCCAACTTCATCAC
CAGTGGCATCGCCCTCCAAGCGCAGgcacgtcctccttccctttctccct
cacgcatgactaatgtctgtttctcgtcccggtcttattctcgcgctccc
tccctccctccctccctccctcccttccctccctccctccctccctccct
ccctcttccagGCCTCCATTCCCATCAAGTCCCTGAAACCCGCCCTCATC
TTCTTGACCGGGCTCTTCCTCTACGACATCTACTTTGTCTTTCTCTCCCC
CGGGGGAGTGATGGAGAGCGTCGCCACTAGCCTGGAGGGACCCGTCAAGC
TGCTCTCGCCTCGCGCCGCGgtatgaaggagggagggagggggagaatga
gaaaagtgtacgataagactgtcttggcattggcatgactacggtgctca
cagtccccccttcccccccccttcctctcttcctccgcctccatcaccgc
ctccctctcctccttttctccttcagGCCGCCACGGCCCCTGGACAGTAT
CCCTTTTCCATCCTCGGCCTGGGTGACATCGTGGTCCCCGGCCTCTTTGT
CGGTCTGCTCAAGCGCATCGACGAGGgtgagagagaggggtgggaaagtg
ggagagcgataagagggagggggtggagcgtgccgatggtgcgcctctga
gatgcgcatgggccggccgtgggcttctctctttttacgcctctgacttg
gcgcctgatggcccttgaagctagcttatggaagagcaaaacgtcatcct
aggtatctcccctctctcctcccactcctctcacaagtcttcctctctct
cctcccactcccccctccccaagGCGTGGACGGCCTGGGCGAGAAGAACA
CTTTCTTCGCCGCCGGGATGACCGGGTACGGCGTCGGCCTTCTCTTGACC
TTCTTGGCCAACATTTTGATGCATCGTGGCCAGCCTGCTCTGCTGTACAT
TGTGCCGTCCCTGATAGCCGCGGCGCTGGGCACGGCGGCCGTGACAGGAC
GATGGGAGGAGGTGTGGGGGTTCAACGGCGAGGAGGCGGAGGAGGGAATG
GAGGGGGCGTGA
back to top

protein sequence of NO29G00030.1

>NO29G00030.1-protein ID=NO29G00030.1-protein|Name=NO29G00030.1|organism=Nannochloropsis oceanica|type=polypeptide|length=468bp
MLSPGTCTAFQIPSCFSSSRWVNPSSSSSSVFPAAASSPLAPSFNALYLR
PVPTPLQQQQQHPQIQQHTARGRPLAFWQRQVEEEVVDVEEEEEMSDDEK
EAIRLQKILDKRLVLAAQALAEDWPVYLFLIGIQAIPVLAGGLVGGNFLF
FWLTACTCVYLGAKRSSAVARAGEIFQAVTTRNAFAAPIAASVSLFGTYY
LLKNQFDIATVYQLMTTFFGGYCLRDVLISTLLFLGELNNIKWVATALSG
AVCATYLWGPAAAVAAAGATGAAGAGSVAFVGAISALLAANFITSGIALQ
AQASIPIKSLKPALIFLTGLFLYDIYFVFLSPGGVMESVATSLEGPVKLL
SPRAAAATAPGQYPFSILGLGDIVVPGLFVGLLKRIDEGVDGLGEKNTFF
AAGMTGYGVGLLLTFLANILMHRGQPALLYIVPSLIAAALGTAAVTGRWE
EVWGFNGEEAEEGMEGA*
back to top
Synonyms
Publications