NO29G00020, NO29G00020 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO29G00020 vs. NCBI_GenBank
Match: EWM21211.1 (nudix [Nannochloropsis gaditana]) HSP 1 Score: 318.2 bits (814), Expect = 3.800e-83 Identity = 174/304 (57.24%), Postives = 200/304 (65.79%), Query Frame = 0 Query: 107 AGYQMEPEGGGDEIFRTGLPPIHWTLPDSAT-SSSPSSGAIKXXXXXXXXXXXXXXXNVSPSPPIKGALPNKSKSVGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXISDGVNRNIYPSHAHAAVAITIATRPSAFDQTIRYCIVKRSKDPGKGKWSLPGGSVELGEEILSAAAREAREETGLTHEDLRFYPYAVCTTDAIYWREKDADGKREKEVQFHYVITHQAAWITTGAVERARAGDDAAEVAFKTLEELKTMTLDGTLVGSVCDVVMRVERLVSKGVINVEFDLVTLEA 410 AG P GDE+FRTGLPP+HW PD+ T S + + + PPIKGALPNKSKS G + ++ N YP HA AAVA+TIAT+PSAF++T RYC+VKRSK+PGKGKWSLPGGSVELGEE L AAAREAREET L+ EDLRFYP+AVCTTDAIY RE A G V FHYVITHQAAWITTGA++RARAGDDAAE+ FKTLEELK M+L+G LVG+VCDVVMRVERLV+KGVIN++FDLV LEA Sbjct: 123 AGSIQGPAEAGDEVFRTGLPPLHWPSPDAETVSGNRGADQSSAPAPTVNLGKNNKRKGAASLPPIKGALPNKSKSTGPPASNVNTGTGEGAYAGDVSRGSSSS---------------REEISINAYPLHARAAVAVTIATKPSAFEKTTRYCVVKRSKEPGKGKWSLPGGSVELGEETLLAAAREAREETSLSKEDLRFYPHAVCTTDAIYRREDGARG-----VLFHYVITHQAAWITTGAMDRARAGDDAAELTFKTLEELKAMSLEGLLVGNVCDVVMRVERLVAKGVINIDFDLVRLEA 406
BLAST of NO29G00020 vs. NCBI_GenBank
Match: XP_005853620.1 (hypothetical protein NGA_0502900, partial [Nannochloropsis gaditana CCMP526] >EKU22739.1 hypothetical protein NGA_0502900, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 246.5 bits (628), Expect = 1.400e-61 Identity = 124/157 (78.98%), Postives = 137/157 (87.26%), Query Frame = 0 Query: 253 QTIRYCIVKRSKDPGKGKWSLPGGSVELGEEILSAAAREAREETGLTHEDLRFYPYAVCTTDAIYWREKDADGKREKEVQFHYVITHQAAWITTGAVERARAGDDAAEVAFKTLEELKTMTLDGTLVGSVCDVVMRVERLVSKGVINVEFDLVTLEA 410 +T RYC+VKRSK+PGKGKWSLPGGSVELGEE L AAAREAREET L+ EDLRFYP+AVCTTDAIY RE A G FHYVITHQAAWITTGA++RARAGDDAAE+ FKTLEELK M+L+G LVG+VCDVVMRVERLV+KGVIN+EFDLV LEA Sbjct: 85 ETTRYCVVKRSKEPGKGKWSLPGGSVELGEETLLAAAREAREETSLSKEDLRFYPHAVCTTDAIYRREDGARG-----FLFHYVITHQAAWITTGAMDRARAGDDAAELTFKTLEELKAMSLEGLLVGNVCDVVMRVERLVAKGVINIEFDLVRLEA 236
BLAST of NO29G00020 vs. NCBI_GenBank
Match: EWM22841.1 (nudix hydrolase [Nannochloropsis gaditana]) HSP 1 Score: 119.8 bits (299), Expect = 2.000e-23 Identity = 77/176 (43.75%), Postives = 100/176 (56.82%), Query Frame = 0 Query: 230 NIYPSHAHAAVAITIATRPSAFDQTIRYCIVKRSKDPGKGKWSLPGGSVELGEEILSAAAREAREETGLTHEDLRFYPYAVCTTDAIYWREKDADGKREKEVQFHYVITHQAAWITTGAVERARAGDDAAEVAFKTLEELKTMTLDGTLVGSVCDVVMRVERLVSKGVINVEFDLV 406 N YP AAV I + R + Y V+RSK+PG +W+LPGGSVE+GEE+L AAARE EET L H L+FYP TTDAIY + A V++H+VI+H W A A DDA ++ + TL +L+T+ + G V +VV VERLV G I + DLV Sbjct: 194 NQYPVFPRAAVNI-VVVRARPLNMGREYLFVQRSKEPGTNQWALPGGSVEIGEEMLQAAAREVVEETTLDHTTLQFYPRCFMTTDAIYNDDMGA-------VKYHFVISHMVCWAAPEAA--PVAADDAKDIRWMTLPQLRTLDPEAIFRG-VVEVVETVERLVDVGCI-TKADLV 357
BLAST of NO29G00020 vs. NCBI_GenBank
Match: CEM39482.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 107.1 bits (266), Expect = 1.300e-19 Identity = 58/175 (33.14%), Postives = 95/175 (54.29%), Query Frame = 0 Query: 225 DGVNRNIYPSHAHAAVAITIATRPSAFDQTIRYCIVKRSKDPGKGKWSLPGGSVELGEEILSAAAREAREETGLTHEDLRFYPYAVCTTDAIYWREKDADGKREKEVQFHYVITHQAAWITTGAVERARAGDDAAEVAFKTLEELKTMTLDGTLVGSVCDVVMRVERLVSKGVIN 400 + + + +YPS+A AAV++ + + Y +++R K+P KGKWSLPGG ++LGE L AAARE +EET L D++ YP + ++DAI + + ++HY+I+ W + A + R DDA E A+ T L + G + +V + R E+L G ++ Sbjct: 50 ESLTKGMYPSYARAAVSVAVCKETGVVGRRPEYLLIRRGKEPSKGKWSLPGGKIDLGETTLEAAARELKEETALNSTDVKLYPDSFYSSDAICFDSR-------HRCKYHYLISTFYGWASRDA--KPRPMDDALEAAWFTKAALDDLHKHGMVDEAVIHAIERGEKLRQSGCLD 215
BLAST of NO29G00020 vs. NCBI_GenBank
Match: XP_009032572.1 (hypothetical protein AURANDRAFT_60840 [Aureococcus anophagefferens] >EGB12956.1 hypothetical protein AURANDRAFT_60840 [Aureococcus anophagefferens]) HSP 1 Score: 94.4 bits (233), Expect = 9.000e-16 Identity = 60/167 (35.93%), Postives = 95/167 (56.89%), Query Frame = 0 Query: 232 YPSHAHAAVAITIATRPSAFDQTIRYCIVKRSKDPGKGKWSLPGGSVELGEEILSAAAREAREETGLTHEDLRFYPYAVCTTDAIYWREKDADGKREKEVQFHYVITHQAAWITTGAVERARAGDDAAEVAFKTLEELKTMTLDGTLVGSVCDVVMRVERLVSKGVI 399 Y AAVA+T+ RP++ YC+++R K PG+G+WS+PGG++ELGEE L+ A RE EETGL + + ++ T+DAIY +D DG+ V+FHY+I + AGDDA + + TL+++ G + G+ ++ R E L + G++ Sbjct: 35 YALTPRAAVAVTV-RRPTS---PPSYCLIQRGKPPGEGRWSIPGGALELGEETLAGARRELAEETGL-RDGVSWHGAPFTTSDAIY---RDDDGR----VRFHYLIAQ--CFCEAAPTAALAAGDDALDAKWFTLDDV--ANAGGDVAGNCWRILARAEALFAAGLL 185
BLAST of NO29G00020 vs. NCBI_GenBank
Match: CUG73042.1 (Hypothetical protein, putative [Bodo saltans]) HSP 1 Score: 92.8 bits (229), Expect = 2.600e-15 Identity = 60/145 (41.38%), Postives = 79/145 (54.48%), Query Frame = 0 Query: 257 YCIVKRSKDPGKGKWSLPGGSVELGEEILSAAAREAREETGLTHE----DLRFYPYAVCTTDAIYWREKDADGKREKE------VQFHYVITHQAAWI-TTGAVERARAGDDAAEVAFKTLEELKTMTLDGTLVGSVCDVVMRVE 391 Y +V+R K P KG W PGGSVE GE L+AA RE +EETGL + L V T+D I E+ E V+ H+V+ H AA + G++ +AGDDAA VA+K+ EE+ MT +G V V DV+ VE Sbjct: 459 YLLVQRGKAPSKGLWGCPGGSVEWGEGSLAAAVRELKEETGLEVDGQSLSLPLGRSPVHTSDVIVPSEEQQANNLANEQEPVRPVEHHFVLMHFAAQLHQEGSLATLKAGDDAAAVAWKSKEEITAMTSEGLCVAGVLDVISAVE 603
BLAST of NO29G00020 vs. NCBI_GenBank
Match: OEU22293.1 (hypothetical protein FRACYDRAFT_179351 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 90.9 bits (224), Expect = 1.000e-14 Identity = 63/175 (36.00%), Postives = 90/175 (51.43%), Query Frame = 0 Query: 231 IYPSHAHAAVAITIA-TRPSAFDQTIRYCIVKRSKDPGKGKWSLPGGSVELGEEILSAAAREAREETGLTHEDLRFYPYAVCTTDAIYWREKDADGKREKEVQFHYVITHQAAWITTGAVERARA---GDDAAEVAFKTLEELKTMTLDGTLVGSVCDVVMRVERLVSKGVINVE 402 IYP AAVA T+ T P+ Y +VKR P + KWS+PGG +ELGEE L+AA RE EET + D ++ + TTD+I D FHYVI H A I + + A DDA + + +LEE+K++ L V +V+ + E L + G++ V+ Sbjct: 2 IYP---RAAVAATVQWTNPNT--NLYHYLLVKRKNPPAQNKWSIPGGKIELGEETLTAAKREIEEETQI--RDCLWHSNSFLTTDSIV-----LDEMNSSSYAFHYVIAHCFAKIPPTSENESPALTPSDDALDAKWLSLEEIKSLECSEHLSKGVIEVITKAEALSTLGILPVQ 164
BLAST of NO29G00020 vs. NCBI_GenBank
Match: XP_005837382.1 (hypothetical protein GUITHDRAFT_151143 [Guillardia theta CCMP2712] >EKX50402.1 hypothetical protein GUITHDRAFT_151143 [Guillardia theta CCMP2712]) HSP 1 Score: 89.7 bits (221), Expect = 2.200e-14 Identity = 59/145 (40.69%), Postives = 82/145 (56.55%), Query Frame = 0 Query: 257 YCIVKRSKDPGKGKWSLPGGSVELGEEILSAAAREAREETGLTHEDLRFYPYAVCTTDAIYWREKDADGKREKEVQFHYVITHQAAWITTGAVERARAGDDAAEVAFKTLEELKTMTLDGTLVGSVCDVVMRVERLVSKGVINVE 402 + ++KR K P G+WSLPGGSVELGE ++AA RE EET L+ D++F+ + T+DAI KDA R FHYVI A I A + AGDDA +V + T E+++ + G + V VV R E L G + ++ Sbjct: 100 WLLIKRGKPPSYGEWSLPGGSVELGESTIAAARRELCEETRLSSNDVKFFEDSFMTSDAIV---KDA---RSDVTLFHYVIAQLFAEIKPEA--QVVAGDDALDVGWFTKEKIRESSF-GAVSPGVLRVVERAEELRRAGCLKLD 235
BLAST of NO29G00020 vs. NCBI_GenBank
Match: XP_005761526.1 (hypothetical protein EMIHUDRAFT_105798 [Emiliania huxleyi CCMP1516] >EOD09097.1 hypothetical protein EMIHUDRAFT_105798 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 87.8 bits (216), Expect = 8.400e-14 Identity = 62/170 (36.47%), Postives = 85/170 (50.00%), Query Frame = 0 Query: 232 YPSHAHAAVAITIATRPSAFDQTIRYCIVKRSKDPGKGKWSLPGGSVELGEEILSAAAREAREETGLTHEDLRFYPYAVCTTDAIYWREKDADGKREKEVQFHYVITHQAAWITTGAVERARAGDDAAEVAFKTLEELKTMTLDGTLVGSVCDVVMRVERLVSKGVINVE 402 Y S AAVA+ + + + Y +V+R K PGKG WSLPGG VELGE AA RE EE L+ +R++ TDAIY +DADG VQFHY+I A A A DDA + + +L E+ G + G+V + R E + G++ + Sbjct: 11 YSSVPRAAVAVAVR---RSEEGPAEYLLVQRGKPPGKGSWSLPGGGVELGETSADAARRELEEECRLSGGAVRWHAGPFTATDAIY---RDADG----AVQFHYLIAQFYA--------EAAAADDAMDARWWSLAEVAGGEGSGVVAGNVEATLRRAEAMRVAGLLRCQ 162
BLAST of NO29G00020 vs. NCBI_GenBank
Match: GAX21888.1 (hypothetical protein FisN_30Hu089 [Fistulifera solaris]) HSP 1 Score: 87.8 bits (216), Expect = 8.400e-14 Identity = 60/165 (36.36%), Postives = 89/165 (53.94%), Query Frame = 0 Query: 238 AAVAITIATRPSAFDQTIRYCIVKRSKDPGKGKWSLPGGSVELGEEILSAAAREAREET--GLTHEDLRFYPYAVCTTDAIYWREKDADGKREKEVQFHYVITHQAAWITTGAVER--ARAGDDAAEVAFKTLEELKTMTLDGTLVGSVCDVVMRVERLVSKGVI 399 AAV++ + + S+ + Y +V+R K+P KGKWS PGG +E GE L+AA RE REET H L +YP VCT+D+I +HY+I A +T E A DDAA+V + TL++++ TLD T + +V+ R+ L G++ Sbjct: 17 AAVSVVVHCQWSSQNY---YLLVQRGKEPAKGKWSFPGGKIEWGESTLAAAVRELREETKWATHHHPLEWYPGTVCTSDSI-------------GSTYHYLIAQCYAQVTFPVSELPVVAAADDAADVGWWTLDDME--TLDTT--PGLSEVIRRIALLSQHGML 161 The following BLAST results are available for this feature:
BLAST of NO29G00020 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO29G00020 ID=NO29G00020|Name=NO29G00020|organism=Nannochloropsis oceanica|type=gene|length=3771bpback to top protein sequence of NO29G00020.1 >NO29G00020.1-protein ID=NO29G00020.1-protein|Name=NO29G00020.1|organism=Nannochloropsis oceanica|type=polypeptide|length=410bpback to top Synonyms
Publications
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