NO28G01720, NO28G01720 (gene) Nannochloropsis oceanica

Overview
NameNO28G01720
Unique NameNO28G01720
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2027
Alignment locationchr28:539399..541425 -

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Properties
Property NameValue
DescriptionRNA helicase,ATP-dependent, DEAD-box type
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr28genomechr28:539399..541425 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR014001Helicase_ATP-bd
IPR001650Helicase_C
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0003676nucleic acid binding
GO:0000166nucleotide binding
Homology
[Close]
BLAST of NO28G01720 vs. NCBI_GenBank
Match: EWM20640.1 (RNA helicase,ATP-dependent, DEAD-box type [Nannochloropsis gaditana])

HSP 1 Score: 461.5 bits (1186), Expect = 1.600e-126
Identity = 223/227 (98.24%), Postives = 226/227 (99.56%), Query Frame = 0 
Query:    1 MDEADKLLSPEFQPILERLLAHCTPNRQIGLFSATFPVAVKTFKDKHIDNPYEINLMEELTLRGITQYYAFVEERQKVHCLNTLFSKLEINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMQQSHRNRVFHEFRNGGTRHLVSSDLFTRGIDIQSVNVVINFDFPKTAETYLHRIGRSGRFGHLGLAINLITYEDRFNLFRIEQELGTEIKPIPRDIDRSLYCV 228
            MDEADKLLSPEFQPILERLLAHC PNRQIGLFSATFPVAVKTFKDKHI+NPYEINLM+ELTLRGITQYYAFVEERQKVHCLNTLFSKLEINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMQQSHRNRVFHEFRNGGTRHLVSSDLFTRGIDIQSVNVVINFDFPKTAETYLHRIGRSGRFGHLGLAINLITY+DRFNLFRIEQELGTEIKPIPRDIDRSLYCV
Sbjct:  186 MDEADKLLSPEFQPILERLLAHCMPNRQIGLFSATFPVAVKTFKDKHIENPYEINLMDELTLRGITQYYAFVEERQKVHCLNTLFSKLEINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMQQSHRNRVFHEFRNGGTRHLVSSDLFTRGIDIQSVNVVINFDFPKTAETYLHRIGRSGRFGHLGLAINLITYDDRFNLFRIEQELGTEIKPIPRDIDRSLYCV 412
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BLAST of NO28G01720 vs. NCBI_GenBank
Match: CBJ26145.1 (DEAD box helicase [Ectocarpus siliculosus])

HSP 1 Score: 421.8 bits (1083), Expect = 1.400e-114
Identity = 203/226 (89.82%), Postives = 212/226 (93.81%), Query Frame = 0 
Query:    1 MDEADKLLSPEFQPILERLLAHCTPNRQIGLFSATFPVAVKTFKDKHIDNPYEINLMEELTLRGITQYYAFVEERQKVHCLNTLFSKLEINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMQQSHRNRVFHEFRNGGTRHLVSSDLFTRGIDIQSVNVVINFDFPKTAETYLHRIGRSGRFGHLGLAINLITYEDRFNLFRIEQELGTEIKPIPRDIDRSLYC 227
            MDEADKLLSPEFQP+LE+L+ HC+  RQI LFSATFPV VK FKD+HI NPYEINLM+ELTL+GITQ+YAFV ERQKVHCLNTLFSKLE+NQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMQQSHRNRVFHEFRNG TRHLVSSDLFTRGIDIQSVNVVINFDFPK AETYLHRIGRSGRFGHLGLAINLITYEDR NLFRIEQELGTEIKPIP  IDR LYC
Sbjct:   49 MDEADKLLSPEFQPVLEQLVNHCSRKRQICLFSATFPVTVKDFKDRHISNPYEINLMDELTLKGITQFYAFVAERQKVHCLNTLFSKLEVNQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMQQSHRNRVFHEFRNGATRHLVSSDLFTRGIDIQSVNVVINFDFPKNAETYLHRIGRSGRFGHLGLAINLITYEDRHNLFRIEQELGTEIKPIPAVIDRDLYC 274
[Close]
BLAST of NO28G01720 vs. NCBI_GenBank
Match: XP_009829781.1 (DEAD-box ATP-dependent RNA helicase 8 [Aphanomyces astaci] >ETV80834.1 DEAD-box ATP-dependent RNA helicase 8 [Aphanomyces astaci])

HSP 1 Score: 412.5 bits (1059), Expect = 8.300e-112
Identity = 194/226 (85.84%), Postives = 214/226 (94.69%), Query Frame = 0 
Query:    1 MDEADKLLSPEFQPILERLLAHCTPNRQIGLFSATFPVAVKTFKDKHIDNPYEINLMEELTLRGITQYYAFVEERQKVHCLNTLFSKLEINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMQQSHRNRVFHEFRNGGTRHLVSSDLFTRGIDIQSVNVVINFDFPKTAETYLHRIGRSGRFGHLGLAINLITYEDRFNLFRIEQELGTEIKPIPRDIDRSLYC 227
            MDEADKLLSPEFQP+LE+L+ H  P RQI LFSATFPV VK+FKDK+IDNPYEINLM+ELTL+G++Q+YAFVEERQKVHCLNTLFSKL+INQSIIFCNSVNRVELLAKK+TELG+SCFYIHAKM Q+HRNRVFHEFRNG TRHLV SDLFTRGIDIQ+VNVVINFDFPK +ETYLHRIGRSGRFGHLGLAIN+ITYEDRFNL+RIEQELGTEI+PIP  IDR+LYC
Sbjct:  195 MDEADKLLSPEFQPLLEQLVNHTAPGRQICLFSATFPVTVKSFKDKYIDNPYEINLMDELTLKGVSQFYAFVEERQKVHCLNTLFSKLDINQSIIFCNSVNRVELLAKKVTELGFSCFYIHAKMNQAHRNRVFHEFRNGATRHLVCSDLFTRGIDIQTVNVVINFDFPKNSETYLHRIGRSGRFGHLGLAINMITYEDRFNLYRIEQELGTEIRPIPPVIDRNLYC 420
[Close]
BLAST of NO28G01720 vs. NCBI_GenBank
Match: XP_009042151.1 (hypothetical protein AURANDRAFT_39444 [Aureococcus anophagefferens] >EGB03146.1 hypothetical protein AURANDRAFT_39444 [Aureococcus anophagefferens])

HSP 1 Score: 411.4 bits (1056), Expect = 1.900e-111
Identity = 194/226 (85.84%), Postives = 213/226 (94.25%), Query Frame = 0 
Query:    1 MDEADKLLSPEFQPILERLLAHCTPNRQIGLFSATFPVAVKTFKDKHIDNPYEINLMEELTLRGITQYYAFVEERQKVHCLNTLFSKLEINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMQQSHRNRVFHEFRNGGTRHLVSSDLFTRGIDIQSVNVVINFDFPKTAETYLHRIGRSGRFGHLGLAINLITYEDRFNLFRIEQELGTEIKPIPRDIDRSLYC 227
            MDEADKLLSPEF+P+LE+L+ HC+P RQI LFSATFPV VK FK+K I NPYEINLM++LTL+GITQ+YAFVEERQKVHCL+TLF+KLEINQS+IFCNSVNRVELLAKKITELGYSCFYIHAKMQQSHRNRVFHEFRNG TRHLVSSDLFTRGIDIQSVNVVINFDFPKT+ETYLHRIGR+GRFGHLGLAINLIT++DRFNL+RIE EL TEIKPIP  I+R LYC
Sbjct:  192 MDEADKLLSPEFEPLLEKLVHHCSPERQICLFSATFPVTVKNFKEKFIHNPYEINLMDDLTLKGITQFYAFVEERQKVHCLHTLFTKLEINQSVIFCNSVNRVELLAKKITELGYSCFYIHAKMQQSHRNRVFHEFRNGSTRHLVSSDLFTRGIDIQSVNVVINFDFPKTSETYLHRIGRAGRFGHLGLAINLITFDDRFNLYRIESELATEIKPIPPTIERELYC 417
[Close]
BLAST of NO28G01720 vs. NCBI_GenBank
Match: XP_009033849.1 (hypothetical protein AURANDRAFT_52587 [Aureococcus anophagefferens] >EGB11487.1 hypothetical protein AURANDRAFT_52587 [Aureococcus anophagefferens])

HSP 1 Score: 411.0 bits (1055), Expect = 2.400e-111
Identity = 193/226 (85.40%), Postives = 213/226 (94.25%), Query Frame = 0 
Query:    1 MDEADKLLSPEFQPILERLLAHCTPNRQIGLFSATFPVAVKTFKDKHIDNPYEINLMEELTLRGITQYYAFVEERQKVHCLNTLFSKLEINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMQQSHRNRVFHEFRNGGTRHLVSSDLFTRGIDIQSVNVVINFDFPKTAETYLHRIGRSGRFGHLGLAINLITYEDRFNLFRIEQELGTEIKPIPRDIDRSLYC 227
            MDEADKLLSPEF+P+LE+L+ HC+P RQI LFSATFPV VK FK+K I NPYEINLM++LTL+GITQ+YAFVEERQKVHCL+TLF+KLEINQS+IFCNSVNRVELLAKKITELGYSCFYIHAKMQQSHRNRVFHEFRNG TRHLVSSDLFTRGIDIQSVNVVINFDFPKT+ETYLHRIGR+GRFGHLGLA+NLIT++DRFNL+RIE EL TEIKPIP  I+R LYC
Sbjct:  192 MDEADKLLSPEFEPLLEKLVHHCSPERQICLFSATFPVTVKNFKEKFIHNPYEINLMDDLTLKGITQFYAFVEERQKVHCLHTLFTKLEINQSVIFCNSVNRVELLAKKITELGYSCFYIHAKMQQSHRNRVFHEFRNGSTRHLVSSDLFTRGIDIQSVNVVINFDFPKTSETYLHRIGRAGRFGHLGLAVNLITFDDRFNLYRIESELATEIKPIPPTIERELYC 417
[Close]
BLAST of NO28G01720 vs. NCBI_GenBank
Match: XP_008873462.1 (DEAD-box ATP-dependent RNA helicase 6 [Aphanomyces invadans] >ETV97901.1 DEAD-box ATP-dependent RNA helicase 6 [Aphanomyces invadans])

HSP 1 Score: 411.0 bits (1055), Expect = 2.400e-111
Identity = 193/226 (85.40%), Postives = 214/226 (94.69%), Query Frame = 0 
Query:    1 MDEADKLLSPEFQPILERLLAHCTPNRQIGLFSATFPVAVKTFKDKHIDNPYEINLMEELTLRGITQYYAFVEERQKVHCLNTLFSKLEINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMQQSHRNRVFHEFRNGGTRHLVSSDLFTRGIDIQSVNVVINFDFPKTAETYLHRIGRSGRFGHLGLAINLITYEDRFNLFRIEQELGTEIKPIPRDIDRSLYC 227
            MDEADKLLSPEFQP+LE+L+ H  P RQI LFSATFPV VK+FKDK+I+NPYEINLM+ELTL+G++Q+YAFVEERQKVHCLNTLFSKL+INQSIIFCNSVNRVELLAKK+TELG+SCFYIHAKM Q+HRNRVFHEFRNG TRHLV SDLFTRGIDIQ+VNVVINFDFPK +ETYLHRIGRSGRFGHLGLAIN+ITYEDRFNL+RIEQELGTEI+PIP  IDR+LYC
Sbjct:  197 MDEADKLLSPEFQPLLEQLVNHTAPGRQICLFSATFPVTVKSFKDKYIENPYEINLMDELTLKGVSQFYAFVEERQKVHCLNTLFSKLDINQSIIFCNSVNRVELLAKKVTELGFSCFYIHAKMNQAHRNRVFHEFRNGATRHLVCSDLFTRGIDIQTVNVVINFDFPKNSETYLHRIGRSGRFGHLGLAINMITYEDRFNLYRIEQELGTEIRPIPPVIDRNLYC 422
[Close]
BLAST of NO28G01720 vs. NCBI_GenBank
Match: XP_008605548.1 (DEAD-box ATP-dependent RNA helicase 8 [Saprolegnia diclina VS20] >EQC40704.1 DEAD-box ATP-dependent RNA helicase 8 [Saprolegnia diclina VS20])

HSP 1 Score: 410.6 bits (1054), Expect = 3.200e-111
Identity = 193/226 (85.40%), Postives = 213/226 (94.25%), Query Frame = 0 
Query:    1 MDEADKLLSPEFQPILERLLAHCTPNRQIGLFSATFPVAVKTFKDKHIDNPYEINLMEELTLRGITQYYAFVEERQKVHCLNTLFSKLEINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMQQSHRNRVFHEFRNGGTRHLVSSDLFTRGIDIQSVNVVINFDFPKTAETYLHRIGRSGRFGHLGLAINLITYEDRFNLFRIEQELGTEIKPIPRDIDRSLYC 227
            MDEADKLLSPEFQP+LE+L+ H  P RQI LFSATFPV VK FKDK+I+NPYEINLM+ELTL+G++Q+YAFVEERQKVHCLNTLFSKL+INQSIIFCNSVNRVELLAKK+TELG+SCFYIHAKM Q+HRNRVFHEFRNG TRHLV SDLFTRGIDIQ+VNVVINFDFPK +ETYLHRIGRSGRFGHLGLAIN+ITYEDRFNL+RIEQELGTEI+PIP  IDR+LYC
Sbjct:  195 MDEADKLLSPEFQPLLEQLVNHTAPGRQICLFSATFPVTVKAFKDKYIENPYEINLMDELTLKGVSQFYAFVEERQKVHCLNTLFSKLDINQSIIFCNSVNRVELLAKKVTELGFSCFYIHAKMNQAHRNRVFHEFRNGATRHLVCSDLFTRGIDIQTVNVVINFDFPKNSETYLHRIGRSGRFGHLGLAINMITYEDRFNLYRIEQELGTEIRPIPPVIDRNLYC 420
[Close]
BLAST of NO28G01720 vs. NCBI_GenBank
Match: XP_012201109.1 (DEAD-box ATP-dependent RNA helicase 8 [Saprolegnia parasitica CBS 223.65] >KDO28289.1 DEAD-box ATP-dependent RNA helicase 8 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 410.6 bits (1054), Expect = 3.200e-111
Identity = 193/226 (85.40%), Postives = 213/226 (94.25%), Query Frame = 0 
Query:    1 MDEADKLLSPEFQPILERLLAHCTPNRQIGLFSATFPVAVKTFKDKHIDNPYEINLMEELTLRGITQYYAFVEERQKVHCLNTLFSKLEINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMQQSHRNRVFHEFRNGGTRHLVSSDLFTRGIDIQSVNVVINFDFPKTAETYLHRIGRSGRFGHLGLAINLITYEDRFNLFRIEQELGTEIKPIPRDIDRSLYC 227
            MDEADKLLSPEFQP+LE+L+ H  P RQI LFSATFPV VK FKDK+I+NPYEINLM+ELTL+G++Q+YAFVEERQKVHCLNTLFSKL+INQSIIFCNSVNRVELLAKK+TELG+SCFYIHAKM Q+HRNRVFHEFRNG TRHLV SDLFTRGIDIQ+VNVVINFDFPK +ETYLHRIGRSGRFGHLGLAIN+ITYEDRFNL+RIEQELGTEI+PIP  IDR+LYC
Sbjct:  195 MDEADKLLSPEFQPLLEQLVNHTAPGRQICLFSATFPVTVKAFKDKYIENPYEINLMDELTLKGVSQFYAFVEERQKVHCLNTLFSKLDINQSIIFCNSVNRVELLAKKVTELGFSCFYIHAKMNQAHRNRVFHEFRNGATRHLVCSDLFTRGIDIQTVNVVINFDFPKNSETYLHRIGRSGRFGHLGLAINMITYEDRFNLYRIEQELGTEIRPIPPVIDRNLYC 420
[Close]
BLAST of NO28G01720 vs. NCBI_GenBank
Match: OQR99751.1 (DEAD/DEAH box RNA helicase [Achlya hypogyna])

HSP 1 Score: 410.6 bits (1054), Expect = 3.200e-111
Identity = 193/226 (85.40%), Postives = 213/226 (94.25%), Query Frame = 0 
Query:    1 MDEADKLLSPEFQPILERLLAHCTPNRQIGLFSATFPVAVKTFKDKHIDNPYEINLMEELTLRGITQYYAFVEERQKVHCLNTLFSKLEINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMQQSHRNRVFHEFRNGGTRHLVSSDLFTRGIDIQSVNVVINFDFPKTAETYLHRIGRSGRFGHLGLAINLITYEDRFNLFRIEQELGTEIKPIPRDIDRSLYC 227
            MDEADKLLSPEFQP+LE+L+ H  P RQI LFSATFPV VK FKDK+I+NPYEINLM+ELTL+G++Q+YAFVEERQKVHCLNTLFSKL+INQSIIFCNSVNRVELLAKK+TELG+SCFYIHAKM Q+HRNRVFHEFRNG TRHLV SDLFTRGIDIQ+VNVVINFDFPK +ETYLHRIGRSGRFGHLGLAIN+ITYEDRFNL+RIEQELGTEI+PIP  IDR+LYC
Sbjct:  191 MDEADKLLSPEFQPLLEQLVNHTAPGRQICLFSATFPVTVKAFKDKYIENPYEINLMDELTLKGVSQFYAFVEERQKVHCLNTLFSKLDINQSIIFCNSVNRVELLAKKVTELGFSCFYIHAKMNQAHRNRVFHEFRNGATRHLVCSDLFTRGIDIQTVNVVINFDFPKNSETYLHRIGRSGRFGHLGLAINMITYEDRFNLYRIEQELGTEIRPIPPVIDRNLYC 416
[Close]
BLAST of NO28G01720 vs. NCBI_GenBank
Match: GAX94094.1 (DEAD-box ATP-dependent RNA helicase 8 [Pythium insidiosum])

HSP 1 Score: 408.7 bits (1049), Expect = 1.200e-110
Identity = 194/226 (85.84%), Postives = 212/226 (93.81%), Query Frame = 0 
Query:    1 MDEADKLLSPEFQPILERLLAHCTPNRQIGLFSATFPVAVKTFKDKHIDNPYEINLMEELTLRGITQYYAFVEERQKVHCLNTLFSKLEINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMQQSHRNRVFHEFRNGGTRHLVSSDLFTRGIDIQSVNVVINFDFPKTAETYLHRIGRSGRFGHLGLAINLITYEDRFNLFRIEQELGTEIKPIPRDIDRSLYC 227
            MDEADKLLSPEFQP+LE+LL H   +RQI LFSATFPV VK FKDK I+NPYEINLM+ELTL+GI+Q+YAFVEERQKVHCLNTLFSKL+INQSIIFCNSVNRVELLAKK+TELGYSCFYIHAKM Q+HRNRVFHEFRNG TRHLV SDLFTRGIDIQ+VNVVINFDFPK +ETYLHRIGRSGRFGHLGLAIN+ITY+DRFNL+RIEQELGTEI+PIP  IDR+LYC
Sbjct: 1537 MDEADKLLSPEFQPLLEQLLNHTAKSRQICLFSATFPVTVKAFKDKFIENPYEINLMDELTLKGISQFYAFVEERQKVHCLNTLFSKLDINQSIIFCNSVNRVELLAKKVTELGYSCFYIHAKMNQAHRNRVFHEFRNGATRHLVCSDLFTRGIDIQTVNVVINFDFPKNSETYLHRIGRSGRFGHLGLAINMITYDDRFNLYRIEQELGTEIRPIPPVIDRNLYC 1762
The following BLAST results are available for this feature:
BLAST of NO28G01720 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM20640.11.600e-12698.24RNA helicase,ATP-dependent, DEAD-box type [Nannoch... [more]
CBJ26145.11.400e-11489.82DEAD box helicase [Ectocarpus siliculosus][more]
XP_009829781.18.300e-11285.84DEAD-box ATP-dependent RNA helicase 8 [Aphanomyces... [more]
XP_009042151.11.900e-11185.84hypothetical protein AURANDRAFT_39444 [Aureococcus... [more]
XP_009033849.12.400e-11185.40hypothetical protein AURANDRAFT_52587 [Aureococcus... [more]
XP_008873462.12.400e-11185.40DEAD-box ATP-dependent RNA helicase 6 [Aphanomyces... [more]
XP_008605548.13.200e-11185.40DEAD-box ATP-dependent RNA helicase 8 [Saprolegnia... [more]
XP_012201109.13.200e-11185.40DEAD-box ATP-dependent RNA helicase 8 [Saprolegnia... [more]
OQR99751.13.200e-11185.40DEAD/DEAH box RNA helicase [Achlya hypogyna][more]
GAX94094.11.200e-11085.84DEAD-box ATP-dependent RNA helicase 8 [Pythium ins... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR087ncniR087Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR101ngnoR101Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO28G01720.1NO28G01720.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|383066gene_11134Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100228g7gene9764Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO28G01720.1NO28G01720.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO28G01720 ID=NO28G01720|Name=NO28G01720|organism=Nannochloropsis oceanica|type=gene|length=2027bp
GTCGGCACCCCCGGCCGCATCCTTGACTTGGCAGACAAAGGTGTGGCGGA
CCTGAGCAAATGTCACACCGTCATCATGGACGAGGCTGACAAGCTCCTCT
CTCCGGAATTTCAGgtaggcggcttccctccctccctccctccctccctc
cctccctccctccttccttccctccctcccttcccctctgtgggactcaa
tcagcgactcgctcaaaccgacccctccctccctccagCCAATCCTCGAG
CGCCTCCTGGCTCACTGCACGCCTAACCGTCAGATCGGGCTCTTCTCCGC
CACCTTCCCCGTGGCTGTCAAAACCTTTAAGgtacgtcctccctccctct
ctccctccctccctccccccccccaaacaaaaattccctcgattgaacaa
agtcgatcaacccctccctccctccctccctccctcccagGACAAGCACA
TCGACAACCCCTACGAGATTAATTTGATGGAGGAGCTCACCCTCCGAGGC
ATAACTCAGTACTACGCCTTCGTCGAAGAGCGGCAGAAGGTCCACTGCCT
CAACACCCTGTTTTCCAAGgtacgacaaacaccctccctccctccctccc
tagtttgtcctcctaatcgcatgcgcctcctcaagctcgctagtctgatc
cctacatctcccatcttcccaccttctttttctgacctccctccctccct
ccctccctcccacacagCTGGAGATCAACCAGTCCATCATCTTTTGCAAT
TCGGTCAATCGCGTCGAGCTGCTGGCGAAGAAAATTACCGAGCTCGGCTA
CTCCTGTTTCTACATTCATGCCAAGATGCAGCAGgtacgaccttcctccc
tccctcatcctccccccccatcctccctccctccctccttccctccctcc
ctcccttcacggaacaattgtcactgtcgctgtacgttccctcacggctt
ctccctccctccctccctccctccctcccttcctccctcagTCGCACCGC
AATCGCGTTTTCCACGAGTTCCGCAACGGTGGGACACGCCACTTGGTCTC
CTCAGgtgaggagggagggagggaggggaagagggggaaaggccagggct
gctaccttcgttcctccctgtcggactgattctgaccctccctccctccc
tccctccctccctcagACCTCTTCACCCGCGGTATTGACATTCAGAGTGT
GAACGTCGTCATCAACTTCGATTTTCCCAAGgtgggagggagggagggag
ggaaggagggagggagggagggagggagggagggagggagggaggtgtgc
aagcgcccggcctcaacattcttccatcgcctccccccgtctgacccctc
cctccccctctccctcagACCGCCGAGACCTACCTCCACCGCATCGGCCG
CTCGGGTCGATTCGGTCATTTAGGACTGGCAATTAATCTCATCACTTACG
AGGATCGATTCAATCTCTTCCGCATCGAGCAGgtacgtcccttccctccc
tccccccctccctctttcttccgtacttatcggtgcatgtgtttcctttc
cttccttttttcctcccttcctccctccccccctcccttcctcaatctct
cccgctttccccccctttttccctcttcctttttcgttcattttttaaac
tctcgcccaaaccctcacccctccctccctccctccctctctccctccct
cagGAATTGGGCACGGAAATCAAGCCCATTCCCCGTGATATCGACCGCTC
CCTCTACTGCGTGTAAGCCAGCCCTCCCTCCCTCCTTCTTTCTTTCCCTC
CCTTCCTTTTTGGGTTTGGAAGAGGAGGGAGGGAGGGAGGGAGGGAGGGA
AAAGAGAAGGGGAGGAAGGAGAGAAGAGAGCAACGAGCAAGAAAATGAGG
AAGGGAGGGAAGTAGGGGAGGGAACGAAGGAGGAGGAGGAAGAAGAAGCG
ACAAATAGGCAATCAATAAAGATGAGATAGAAGGAGATAAGGAAGGAAGG
GAGGGAAGGAGGGAAGGGAGGGAGGGA
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protein sequence of NO28G01720.1

>NO28G01720.1-protein ID=NO28G01720.1-protein|Name=NO28G01720.1|organism=Nannochloropsis oceanica|type=polypeptide|length=228bp
MDEADKLLSPEFQPILERLLAHCTPNRQIGLFSATFPVAVKTFKDKHIDN
PYEINLMEELTLRGITQYYAFVEERQKVHCLNTLFSKLEINQSIIFCNSV
NRVELLAKKITELGYSCFYIHAKMQQSHRNRVFHEFRNGGTRHLVSSDLF
TRGIDIQSVNVVINFDFPKTAETYLHRIGRSGRFGHLGLAINLITYEDRF
NLFRIEQELGTEIKPIPRDIDRSLYCV*
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Synonyms
Publications