NO28G01710, NO28G01710 (gene) Nannochloropsis oceanica

Overview
NameNO28G01710
Unique NameNO28G01710
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3868
Alignment locationchr28:533430..537297 -

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Properties
Property NameValue
DescriptionTranslation initiation factor eIF-2B subunit family protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr28genomechr28:533430..537297 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0016787hydrolase activity
GO:0003743translation initiation factor activity
Vocabulary: Biological Process
TermDefinition
GO:0044237cellular metabolic process
GO:0044237cellular metabolic process
GO:0006413translational initiation
Vocabulary: INTERPRO
TermDefinition
IPR037171NagB/RpiA_transferase-like
IPR015797NUDIX_hydrolase_dom-like
IPR000086NUDIX_hydrolase_dom
IPR000649IF-2B-related
Homology
BLAST of NO28G01710 vs. NCBI_GenBank
Match: PRW20650.1 (initiation factor 2B related [Chlorella sorokiniana])

HSP 1 Score: 125.6 bits (314), Expect = 5.300e-25
Identity = 161/561 (28.70%), Postives = 218/561 (38.86%), Query Frame = 0
Query:   32 KQVATAIVRDPKTGLFLALKRSDKVGSFQRHWHFISGGMEMDDDNDVLRRAYTELEEEVQLKREHLCLVAQGRPLLVAIEGRLGNGKILVHPVLFDLVQPYHGPPLDESV-LNWENVDIRWMSLEALNGVPVVPRLVETARRTLRVEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWPPAVEEGMEEIVTDRVHGAMTLMSWAVAVLGTWAREGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLARLEDEACVTFPLFL---KGRKEELKEGGVSLLLSAYDDSKKRG---------------------ERRTGGREG----------GRGLTIMTLSLSSTVMEVMEGFRKRLXXXXXXXXXXXXXEVKVIVCESRPLFEGARTVKMLREMGYTDVMLITDAQMGIFAQLANLCLLGADSLLVPPXXXXXXXXXXXXXXXAINKAGSLPLALCCQHFGVSVYVLSSELKISSSSHSFSPLAMEAMSRE----------EVTEDCAVGRLLEPFLDGVEISNVYFEGLPL 548
            KQV TA ++ P  G  L + RSDKVG+++R+W  +SGG+E   D  ++ R   E+ EEV    + + LV  GRPL+V  +GRL      +HP LF L Q       D  V LNWEN+D  W+    +  +  VP L ET  R L  +                                      +  ++ +  DR HGA  L  +AV  L   A                                                 XXXXXXXXXX A L  EA   F   L   + +   +     ++L SA+DD + R                      +RR  G               G+T+MT SLSSTV+  ++                   +++ IVCESRPL EG        E G  DV+LITDAQ  +F   A+L L+GAD++                   A+NKAGS  LAL     G+ VYV +   K+S       PLA  A   +                A GR   P   GV + N+YFE +PL
Sbjct:   17 KQVVTAFIQRPADGNVLVVLRSDKVGTYKRYWGAVSGGVE-PGDRSLVERCRQEILEEVGFAADQVQLVHSGRPLIVD-DGRL---HFNIHPFLFRLNQG------DAKVQLNWENIDTSWVPPAGVRQLRAVPLLAETLERLLLED--------------------------------------DSAIKYLAEDRQHGAAELAVYAVQALAQEA----------------------------------------DRLARQAAAXXXXXXXXXXXAAL--EAIRNFGWHLACCRPQMVPIANSVAAVLASAHDDLRSRADAFAVPLGEVCGVVQQHAAAEQRRLAGAAAQLRQQVLGLLRDGMTLMTCSLSSTVLAAVK------------EAAAGGMKLRAIVCESRPLCEGVTLAAQWAEAG-VDVVLITDAQAALFVGQADLVLVGADAI---------------TEAAAVNKAGSHLLALAAHAAGMPVYVAADTSKLSP-----GPLASIAFPGQXXXXXXXXXXXXXXTAAWGR---PLPAGVRVRNLYFEPVPL 450          
BLAST of NO28G01710 vs. NCBI_GenBank
Match: OHE53527.1 (hypothetical protein A3K61_00155 [Thaumarchaeota archaeon RBG_16_49_8])

HSP 1 Score: 96.3 bits (238), Expect = 3.400e-16
Identity = 129/523 (24.67%), Postives = 194/523 (37.09%), Query Frame = 0
Query:   32 KQVATAIVRDPKTGLFLALKRSDKVGSFQRHWHFISGGMEMDDDNDVLRRAYTELEEEVQLKREHLCLVAQGRPLLVAIEGRLGNGKILVHPVLFDLVQPYHGPPLDESVLNWENVDIRWMSLEALNGVPVVPRLVETARRTLRVEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWPPAVEEGMEEIVTDRVHGAMTLMSWAVAVLGTWAREGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLARLEDEACVTFPLFLKGRKEELKEGGVSLLLSAYDDSKKRGERRTGGREGGRGLT--------IMTLSLSSTVMEVMEGFRKRLXXXXXXXXXXXXXEVKVIVCESRPLFEGARTVKMLREMGYTDVMLITDAQMGIFAQLANLCLLGADSLLVPPXXXXXXXXXXXXXXXAINKAGSLPLALCCQHFGVSVYVLSSELKISSSSHSFSPLAMEAMSREEVTEDCAVGRLLEPFLDGVEISNVYFEGLP 547
            KQV T+ ++    G  L LKRS+KVG+ Q  W  ISG +E  +  + L RA TE++EEV L  + + LV  G P  + I     +   +VHP LF++          E   +WE+ + +W+  E L     VP L ET ++ L                                      P +   + +I +DR HGA  L   AV  L                                                               LA+   +A  T  +   G  +    G    +++A ++     ERR    +  + ++        I+  S SSTV++ ++                     +VI  ESRPLFEG  T K L + G   V L+TDA    FA  A++ LLGADSL                    +NKAG+  + L   + G  VYVL+   K++  S  FS + +E     EV E+           + V + N+YF+  P
Sbjct:    4 KQVVTSFLQ--HDGKILILKRSEKVGTHQGRWAGISGYLEKKE--EPLVRALTEIKEEVDLPSDQVELVRAGEP--IGIPDAENDVFWVVHPRLFNVRSV-------ELKTDWEHTEHKWIEPEELVKYHTVPALNETLQKVLPTPLEKIIPN----------------------------PVILGQIRDIESDRAHGASFLAVEAVQTL-------------------VKAVEAEDESGDFDLFLARFKMLAERLMGLRPSMAPLNNLVGELLAKTVKKAETTRSV---GELKMFVRGEADHVIAASEE-----ERRVIAEKASQIISKNVPENGKILIHSYSSTVLDALK------------QAYDDGRRFEVITTESRPLFEGRTTAKELADHG-IPVSLVTDAASAYFAAGADMVLLGADSLFA--------------DGSVVNKAGTYSIVLAAAYHGAPVYVLAGLSKVNLRSF-FSHVLLEEKDTREVWENAP---------ENVTVRNLYFDLTP 421          
BLAST of NO28G01710 vs. NCBI_GenBank
Match: KIY42976.1 (translation initiation factor eIF-2B subunit family protein [Fistulina hepatica ATCC 64428])

HSP 1 Score: 94.7 bits (234), Expect = 1.000e-15
Identity = 129/519 (24.86%), Postives = 186/519 (35.84%), Query Frame = 0
Query:   40 RDPKTGLFLALKRSDKVGSFQRHWHFISGGMEMDDDNDVLRRAYTELEEEVQLKRE-HLCLVAQGRPLLVAIEGRLGNGKILVHPVLFDLVQPYHGPPLDESV-LNWENVDIRWMSLEALNGV---PVVPRLVETARRTLRVEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWPPAVEEGMEEIVTDRVHGAMTLMSWAVAVLGTWAREGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLARLEDEACVTFPLFLKGRKEELKEGGVSLLLSAYDDSKKRGERRTGGREGGRGLTIMTLSLSSTVMEVMEGFRKRLXXXXXXXXXXXXXEVKVIVCESRPLFEGARTVK-MLREMGYTDVMLITDAQMGIFAQLANLCLLGADSLLVPPXXXXXXXXXXXXXXXAINKAGSLPLALCCQHFGVSVYVLSSELKISSSSHSFSPLAMEAMSREEVTEDCAVGRLLEPF-----LDG-VEISNVYFEGLP 547
            RD      L  KRS KV +++ HW  ISG +E +D + +  RA  E+ EE  L  + HL LV  G+P  +       +    +HP LF L      P L E V ++WE+ + +W   E L      P VP LVET RR +RV                                    P V  G+ E+  D V GA  +   A+ V     R+G                                                          R  D A       +   +        + L    D+ + RG            +TI+TLS SST+   +    +R               VK+++ ESRP  EG    K ++ E    +V + +DA +G+FAQ A   LLGAD +                     NK GSLP A+  +  G  V  ++   KIS SS            +E+  E+ A   LL  +      +G V++ N YFE +P
Sbjct:   16 RDGNISKILLAKRSTKVHTYREHWASISGSIETNDPSPI-ARARIEISEETSLDPDAHLDLVLAGKPQHIRDSDL--DTHWTIHPFLFAL----KSPELAERVHIDWEHTEAKWAPPEELENAVIRPTVPGLVETFRR-VRV-----------------------------------GPLVARGLRELQNDTVSGAQEMAVHALRVF----RDGIDDVHTNDPNEFWRRLRMMGWHIAKNGRPSMSAAIEGGILRALTDVKKRWDATSVTTGR--DVAQKVVTELISASESVTSRLKTAFLKFMADEGRNRGH-----------ITILTLSHSSTLRNCLAELVRR-----------PPVFVKLLILESRPANEGVALAKRLVDENPNVEVEIASDASVGLFAQQATHLLLGADRI--------------TPSGDIFNKIGSLPAAILARRCGAKVVAVAQRDKISKSSD----------DKEDYLEEHAGDELLRAWDSTLKANGKVQVRNFYFEKVP 439          
BLAST of NO28G01710 vs. NCBI_GenBank
Match: PKK77598.1 (nagb/rpia/CoA transferase-like protein [Rhizophagus irregularis])

HSP 1 Score: 86.3 bits (212), Expect = 3.600e-13
Identity = 112/517 (21.66%), Postives = 179/517 (34.62%), Query Frame = 0
Query:   48 LALKRSDKVGSFQRHWHFISGGMEMDDDNDVLRRAYTELEEEVQLKREHLCLVAQGRPLLVAIEGRLGNGKILVHPVLFDLVQPYHGPPLDESVLNWENVDIRWMSLEALNGVPVVPRLVETARRTLRVEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWPPAVEEGMEEIVTDRVHGAMTLMSWAVAVLGTWAREGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLARLEDEACVTFPLFLKGRKE---ELKEGGVSLLLSAYDDSKKRGERRTGGREGGRGLTIMTLSLSSTVMEVMEGFRKRLXXXXXXXXXXXXXEV---KVIVCESRPLFEGARTVKML---------------REMGYTDVMLITDAQMGIFAQLANLCLLGADSLLVPPXXXXXXXXXXXXXXXAINKAGSLPLALCCQHFGVSVYVLSSELKISSSSHSFSPLAMEAMSREEVTEDCAVGRLLEPFLDGVEISNVYFE 544
            L LKRSDKV +++ HW  ISGG+E ++D+  L RA  E++EE+ L    + L+  G+ L +  E      K  V+P LF +        +++  +NWE+    W+    LN    VP L+ET  R                                       P  V +G+ ++  DR  GA  L   ++ +L                                                               +   E+             KE   ++KE  +  L  + ++ K + E           + IMT+S SST+   +    ++              ++   K+ + ESRPL EGA   + L               +      + +ITDA    F       L+GAD +                    INK GS+ L L  +HF  SVY++++  KISS         +E    +E+T+      +       V I N+YFE
Sbjct:   27 LLLKRSDKVRTYKNHWAGISGGIE-ENDSSPLERALKEIQEEISLSHTDITLIRSGKLLTILGENEQTIWK--VYPFLFHINTT---NLINKIQINWEHQTYEWIKPTELNNYECVPNLLETLYRV------------------------------------YLPTHVHKGLNDMFKDRNSGAQELSKKSLDILKETIINKEFRKISKNSKELWKNLLNVGWYLKEIRPNMKASISFGITNVLKKSKEILQDKEGIDIEEYENNIINIIEQMKTSYKENDKKIKENFLKALFPSLNEEKSKQE---------EDIHIMTMSYSSTIYSSICSLIQKFINYLTKEEEKEEKDISTLKITIMESRPLNEGATLAQKLSTWLTSTSXXXXXXXKIYNKIIIQVITDASCNYFMPTVTHVLIGADHI-------------SGNNGDIINKIGSMSLILSAKHFNKSVYIITTSNKISSPFEE----KIEENESKELTKSYGNEWINNIKGKNVLIRNIYFE 475          
BLAST of NO28G01710 vs. NCBI_GenBank
Match: EXX56884.1 (hypothetical protein RirG_212240 [Rhizophagus irregularis DAOM 197198w] >GBC35349.1 translation initiation factor eif-2b subunit family protein [Rhizophagus irregularis DAOM 181602] >PKC61743.1 nagb/rpia/CoA transferase-like protein [Rhizophagus irregularis] >PKY27984.1 nagb/rpia/CoA transferase-like protein [Rhizophagus irregularis])

HSP 1 Score: 85.5 bits (210), Expect = 6.100e-13
Identity = 112/517 (21.66%), Postives = 179/517 (34.62%), Query Frame = 0
Query:   48 LALKRSDKVGSFQRHWHFISGGMEMDDDNDVLRRAYTELEEEVQLKREHLCLVAQGRPLLVAIEGRLGNGKILVHPVLFDLVQPYHGPPLDESVLNWENVDIRWMSLEALNGVPVVPRLVETARRTLRVEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWPPAVEEGMEEIVTDRVHGAMTLMSWAVAVLGTWAREGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLARLEDEACVTFPLFLKGRKE---ELKEGGVSLLLSAYDDSKKRGERRTGGREGGRGLTIMTLSLSSTVMEVMEGFRKRLXXXXXXXXXXXXXEV---KVIVCESRPLFEGARTVKML---------------REMGYTDVMLITDAQMGIFAQLANLCLLGADSLLVPPXXXXXXXXXXXXXXXAINKAGSLPLALCCQHFGVSVYVLSSELKISSSSHSFSPLAMEAMSREEVTEDCAVGRLLEPFLDGVEISNVYFE 544
            L LKRSDKV +++ HW  ISGG+E ++D+  L RA  E++EE  L    + L+  G+  L+ I G+       V+P LF +        +++  +NWE+    W+    LN    VP L+ET  R                                       P  V +G+ ++  DR  GA  L   ++ +L                                                               +   E+             KE   ++KE  +  L  + ++ K + E           + IMT+S SST+   +    ++              ++   K+ + ESRPL EGA   + L               +      + +ITDA    F       L+GAD +                    INK GS+ L L  +HF  SVY++++  KISS         +E    +E+T+      +       V I N+YFE
Sbjct:   27 LLLKRSDKVRTYKNHWAGISGGIE-ENDSSPLERALKEIQEETSLSHTDITLIRSGK--LLTILGKNEQTIWKVYPFLFHINTTI---LINKIQINWEHQTYEWIKPTELNNYECVPNLLETLYRV------------------------------------YLPTHVHKGLNDMFKDRNSGAQELSKKSLDILKETIINKEFRKISKNSKELWKNLLNVGWYLKEIRPNMKASISFGITNVLKKSKEILQDKEGIDIEEYENNIINIIEQMKTSYKENDKKIKENFLKALFPSLNEEKSKQE---------EDIHIMTMSYSSTIYSSICSLIQKFINYLTKEEEKEEKDISTLKITIMESRPLNEGATLAQKLSTWLTSTSXXXXXXXKIYNKIIIQVITDASCNYFMPTVTHVLIGADHI-------------SGNNGDIINKIGSMSLILSAKHFNKSVYIITTSNKISSPFEE----KIEENESKELTKSYGNEWINNIKGKNVLIRNIYFE 475          
BLAST of NO28G01710 vs. NCBI_GenBank
Match: PSC67712.1 (initiation factor 2B [Micractinium conductrix])

HSP 1 Score: 85.5 bits (210), Expect = 6.100e-13
Identity = 165/498 (33.13%), Postives = 215/498 (43.17%), Query Frame = 0
Query:   32 KQVATAIVRDPKTGLFLALKRSDKVGSFQRHWHFISGGMEMDDDNDVLRRAYTELEEEVQLKREHLCLVAQGRPLLVAIEGRLGNGKILVHPVLFDLVQPYHGPPLDESVLNWENVDIRWMSLEALNGVPVVPRLVETARRTLRVEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWPPAVEEGMEEIVTDRVHGA-----------MTLMSWAVAVLGTWAREGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLARLEDEACV---TFPLFLKGRKEELKEG------------GVSLLLSAYDDSKKRGERRTGGREGG----RGLTIMTLSLSSTVMEVMEGFRKRLXXXXXXXXXXXXXEVKVIVCESRPLFEGARTVKMLREMGYTDVMLITDAQMGIFAQLANLCLLGADSLLVPPXXXXXXXXXXXXXXXAINKAGSLPLALCCQHFGVSVYVLSSELKIS 500
            K V TA V+ P +G  L + RS KVG+++  W  +SGG+E  D + +  RA  E+ EE  ++   L L   GRPLLV      G     VHP LF L  P       +  LNWEN   +W++ E +  +   P+L ET  R                                        P  EE + E+  DR  GA                             XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX       LA           +    L    EEL               GV    +A +  + RG      R+       G T+MT+SLSS+V + ++                   +++ I+CE+RPL EG    +     G  +  L+TDAQ GIF   A+L ++GAD++                    +NKAG+  LAL     GV VY  +   K+S
Sbjct:   17 KHVTTAFVQRPGSGKVLLVLRSHKVGTYRGQWGAVSGGVEAGDAS-LAARAQEEVWEEAGIRPSQLRLERGGRPLLVDD----GRRHFAVHPFLFSLTDPE-----ADVTLNWENDAAQWVAPEQIRSMDTAPQLPETWGRLALT------------------------------------PGQEEALGELAADRSRGAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRNYGWHLAACRPSMAAVANSVAAVLAAAHEELHSRADAFEAPLSEVCGVVQAAAATELRRLRGAAAAVQRQVAGLLRDGTTVMTISLSSSVRDGVK------------EAAASGMKLRAIICEARPLCEGVALAEAWAAAG-VECTLVTDAQAGIFVHQADLVMVGADAV---------------TDQGVVNKAGTRLLALAAHAAGVPVYAAADSGKLS 440          
BLAST of NO28G01710 vs. NCBI_GenBank
Match: PKC17065.1 (nagb/rpia/CoA transferase-like protein [Rhizophagus irregularis])

HSP 1 Score: 85.1 bits (209), Expect = 7.900e-13
Identity = 112/517 (21.66%), Postives = 178/517 (34.43%), Query Frame = 0
Query:   48 LALKRSDKVGSFQRHWHFISGGMEMDDDNDVLRRAYTELEEEVQLKREHLCLVAQGRPLLVAIEGRLGNGKILVHPVLFDLVQPYHGPPLDESVLNWENVDIRWMSLEALNGVPVVPRLVETARRTLRVEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWPPAVEEGMEEIVTDRVHGAMTLMSWAVAVLGTWAREGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLARLEDEACVTFPLFLKGRKE---ELKEGGVSLLLSAYDDSKKRGERRTGGREGGRGLTIMTLSLSSTVMEVMEGFRKRLXXXXXXXXXXXXXEV---KVIVCESRPLFEGARTVKML---------------REMGYTDVMLITDAQMGIFAQLANLCLLGADSLLVPPXXXXXXXXXXXXXXXAINKAGSLPLALCCQHFGVSVYVLSSELKISSSSHSFSPLAMEAMSREEVTEDCAVGRLLEPFLDGVEISNVYFE 544
            L LKRSDKV +++ HW  ISGG+E ++D+  L RA  E++EE  L    + L+  G+ L +  E      K  V+P LF +        +++  +NWE+    W+    LN    VP L+ET  R                                       P  V +G+ ++  DR  GA  L   ++ +L                                                               +   E+             KE   ++KE  +  L  + ++ K + E           + IMT+S SST+   +    ++              ++   K+ + ESRPL EGA   + L               +      + +ITDA    F       L+GAD +                    INK GS+ L L  +HF  SVY++++  KISS         +E    +E+T+      +       V I N+YFE
Sbjct:   27 LLLKRSDKVRTYKNHWAGISGGIE-ENDSSPLERALKEIQEETSLSHTDITLIRSGKLLTILGENEQTIWK--VYPFLFHINTT---NLINKIQINWEHQTYEWIKPTELNNYECVPNLLETLYRV------------------------------------YLPTHVHKGLNDMFKDRNSGAQELSKKSLDILKETIINKEFRKISKNSKELWKNLLNVGWYLKEIRPNMKASISFGITNVLKKSKEILQDKEGIDIEEYENNIINIIEQMKTSYKENDKKIKENFLKALFPSLNEEKSKQE---------EDIHIMTMSYSSTIYSSICSLIQKFINYLTKEEEKEEKDISTLKITIMESRPLNEGATLAQKLSTWLTSTSXXXXXXXKIYNKIIIQVITDASCNYFMPTVTHVLIGADHI-------------SGNNGDIINKIGSMSLILSAKHFNKSVYIITTSNKISSPFEE----KIEENESKELTKSYGNEWINNIKGKNVLIRNIYFE 475          
BLAST of NO28G01710 vs. NCBI_GenBank
Match: PNV85196.1 (NUDIX pyrophosphatase [Desulfobacteraceae bacterium])

HSP 1 Score: 84.3 bits (207), Expect = 1.400e-12
Identity = 46/127 (36.22%), Postives = 76/127 (59.84%), Query Frame = 0
Query:   48 LALKRSDKVGSFQRHWHFISGGMEMDDDNDVLRRAYTELEEEVQLKREHLCLVAQGRPLLVAIEGRLGNGKILVHPVLFDLVQPYHGPPLDESVLNWENVDIRWMSLEALNGVPVVPRLVETARRTL 175
            L LKRS +VG+++ HW  +SG +E +D    L++AY+E+ EEV L  + + LV  G+PL +  + +  +    VHP LF + +P      D+  L+WEN+++RW+  E ++ +  VP L ET  R +
Sbjct:   19 LVLKRSREVGTYKGHWAGVSGYLESEDP---LKQAYSEMAEEVGLSEQDVTLVKAGKPLEIVDDAQ--DRAWRVHPFLFSVHEP------DKIRLDWENIEMRWILPEEIDQLKTVPALKETLERVI 134          
BLAST of NO28G01710 vs. NCBI_GenBank
Match: PKY47494.1 (nagb/rpia/CoA transferase-like protein [Rhizophagus irregularis])

HSP 1 Score: 84.0 bits (206), Expect = 1.800e-12
Identity = 112/517 (21.66%), Postives = 177/517 (34.24%), Query Frame = 0
Query:   48 LALKRSDKVGSFQRHWHFISGGMEMDDDNDVLRRAYTELEEEVQLKREHLCLVAQGRPLLVAIEGRLGNGKILVHPVLFDLVQPYHGPPLDESVLNWENVDIRWMSLEALNGVPVVPRLVETARRTLRVEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWPPAVEEGMEEIVTDRVHGAMTLMSWAVAVLGTWAREGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLARLEDEACVTFPLFLKGRKE---ELKEGGVSLLLSAYDDSKKRGERRTGGREGGRGLTIMTLSLSSTVMEVMEGFRKRLXXXXXXXXXXXXXEV---KVIVCESRPLFEGARTVKML---------------REMGYTDVMLITDAQMGIFAQLANLCLLGADSLLVPPXXXXXXXXXXXXXXXAINKAGSLPLALCCQHFGVSVYVLSSELKISSSSHSFSPLAMEAMSREEVTEDCAVGRLLEPFLDGVEISNVYFE 544
            L LKRSDKV +++ HW  ISGG+E ++D+  L RA  E++EE  L    + L+  G+ L +  E      K  V+P LF +        +++  +NWE+    W+    LN    VP L+ET  R                                       P  V +G+ ++  DR  GA  L   ++ +L                                                               +   E+             KE   ++KE  +  L  + ++ K + E           + IMT+S SST+   +    ++              ++   K+ + ESRPL EGA   + L                      + +ITDA    F       L+GAD +                    INK GS+ L L  +HF  SVY++++  KISS     +    E    +E+T+      +       V I N+YFE
Sbjct:   27 LLLKRSDKVRTYKNHWAGISGGIE-ENDSSPLERALKEIQEETSLSHTDITLIRSGKLLTILGENEQTIWK--VYPFLFHINTT---NLINKIQINWEHQTYEWIKPTELNNYECVPNLLETLYRV------------------------------------YLPTHVHKGLNDMFKDRNSGAQELSKKSLDILKETIINKEFRKISKNSKELWKNLLNVGWYLKEIRPNMKASISFGITNVLKKSKEILQDKEGIDIEEYENNIINIIEQMKTSYKENDKKIKENFLKALFPSLNEEKSKQE---------EDIHIMTMSYSSTIYSSICSLIQKFINYLTKEEEKEEKDISTLKITIMESRPLNEGATLAQKLSTWLTXXXXXXXXXXXXXNKIIIQVITDASCNYFMPTVTHVLIGADHI-------------SGNNGDIINKIGSMSLILSAKHFNKSVYIITTSNKISSPFEEKN----EENESKELTKSYGNEWINNIKGKNVLIRNIYFE 475          
BLAST of NO28G01710 vs. NCBI_GenBank
Match: OLL25997.1 (Methylthioribose-1-phosphate isomerase [Neolecta irregularis DAH-3])

HSP 1 Score: 78.2 bits (191), Expect = 9.700e-11
Identity = 103/453 (22.74%), Postives = 169/453 (37.31%), Query Frame = 0
Query:   48 LALKRSDKVGSFQRHWHFISGGMEMDDDNDVLRRAYTELEEEVQLKREHLCLVAQGRPLLVAIEGRLGNGKILVHPVLFDLVQPYHGPPLDESVLNWENVDIRWMSLEALNGVPVVPRLVETARRTLRVEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWPPAVEEGMEEIVTDRVHGAMTLMSWAVAVLGTWAREGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLARLEDEACVTFPLFLKGRKEELKEGGVSLLLSAYDDSKKRGERRTGGREGGRGLTIMTLSLSSTVMEVMEGFRKRLXXXXXXXXXXXXXEVKVIVCESRPLFEGARTVKMLREMGYTDV--MLITDAQMGIFAQLANLCLLGADSLLVPPXXXXXXXXXXXXXXXAINKAGSLPLALCCQHFGVSVYVLSSELKI 499
            L L+RS KV ++Q  W  ISG +E +DD   L R+Y E+E+E +L R+ + L+  G  L +AI+    + +  ++P LF++        L    +++E+   +W++ + L+    VPRL ET  R                                       P  + + +  + TDR  GA  +   A+ VL    +E                                                         +   +   C      L+  K+ L   G    L  Y+                  + I+TLS SST   V++ +  +L             +V++ V ESRPLFEG +  K+L    + +V   + +DA +GIFAQ A   ++GAD +                    +NK GSL  A+  + +G  V V+S + KI
Sbjct:   24 LLLQRSGKVNTYQGKWAGISGSIE-EDDVSPLERSYIEIEQETRLDRKDITLIISG--LEMAIKDDNLDTEWHIYPFLFEM----KDSQLVSITIDFEHSTYKWINPKDLSTYDTVPRLSETFARV------------------------------------YIPQQICKLISNLQTDREMGAREMSEMALDVLIQAVQESQITFGRLCLVGYYAVQSRQSMKAAMESSLARVLTNIQKRLVAATSKFDLASITRQEVENEKSSGC------LRLEKQVL---GFKACLDGYEK-----------------IHILTLSYSSTTAIVLKHWLSQL---------PLEIKVRITVLESRPLFEGVKLAKILSLDSHENVHIEIASDACVGIFAQRATHVVIGADRI--------------SADGDVLNKVGSLGAAILGRRYGAKVVVVSGQDKI 384          
The following BLAST results are available for this feature:
BLAST of NO28G01710 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
PRW20650.15.300e-2528.70initiation factor 2B related [Chlorella sorokinian... [more]
OHE53527.13.400e-1624.67hypothetical protein A3K61_00155 [Thaumarchaeota a... [more]
KIY42976.11.000e-1524.86translation initiation factor eIF-2B subunit famil... [more]
PKK77598.13.600e-1321.66nagb/rpia/CoA transferase-like protein [Rhizophagu... [more]
EXX56884.16.100e-1321.66hypothetical protein RirG_212240 [Rhizophagus irre... [more]
PSC67712.16.100e-1333.13initiation factor 2B [Micractinium conductrix][more]
PKC17065.17.900e-1321.66nagb/rpia/CoA transferase-like protein [Rhizophagu... [more]
PNV85196.11.400e-1236.22NUDIX pyrophosphatase [Desulfobacteraceae bacteriu... [more]
PKY47494.11.800e-1221.66nagb/rpia/CoA transferase-like protein [Rhizophagu... [more]
OLL25997.19.700e-1122.74Methylthioribose-1-phosphate isomerase [Neolecta i... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR087ncniR087Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR101ngnoR101Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO28G01710.1NO28G01710.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|383115gene_11135Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO28G01710.1NO28G01710.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO28G01710 ID=NO28G01710|Name=NO28G01710|organism=Nannochloropsis oceanica|type=gene|length=3868bp
ATGTCTGCCACTCCAACTTCCTCGTCTTCCCCGCCGACGACGACCCGCCC
TCCTACCCCTCCTCCTCGACCATCCCAACCGCGACGTCCGCACAAACAAG
TTGCCACAGCCATCGTCCGTGACCCCAAGACCGGCCTCTTCCTCGCCTTG
AAGCGTTCCGACAgtaaggaaggggaatgggagggagggagggaaagagg
aagggagggagggagggagggagggagggaggaggttcaagaagaaagaa
ttgattagaggaggaatggatcaatgtgtacgtgaaatcaatcaacgccc
cctccaaacacccctctcaaccttttcccttcctccctcacttccagAGG
TAGGCTCCTTTCAGCGGCATTGGCACTTCATTTCTGGAGGGATGGAAATG
GACGATGACAACGATGTCCTCAGGCGGGCTTACACgtacgtggctctatc
ccctccgtccctccctccctccccccctctctcctgccttcagatgcaca
tgcactttgggtcttcctgtcgttgctcttctcgctccccctctccctcc
ctccctcccttccttcctccctccctctctcgtgctcccgttgtccaacc
ctcgttctcgccctccctccctccctccctccccccccctccatcagAGA
GCTCGAAGAAGAGGTTCAGTTGAAGAGAGAGCATCTTTGTCTCGTTGCTC
AAGGCCGCCCTCTGCTGGTGGCGATTGAGGGGAGgtagggaaggaaggga
ggagggtgagaaggaggaagtgagtgatttctcgcacacacactctgtgg
aagttatgtaatgtgtttctcgtacacaccctgcagGCTCGGAAACGGGA
AGATCCTCGTCCATCCCGTGCTCTTCGACCTGGTCCAGgtagggagggga
gggaagggagggtgggagggagggagggagggagggagggagggagggag
ggagggagggagggagggagggagggaggtgtttgatgggtagctacgct
ttcccttttatgcaaattcgcaaatgatttccttcattccccttttgctc
tccctccctcccgcccgcccgccctccctccctctagCCCTACCATGGGC
CGCCCCTGGACGAGAGCGTGTTAAATTGGGAGAACGTCGACATTCGCTGG
ATGTCTCTCGAGGCCCTGAATGgtgcgcccatccctccctccctccctcc
ctccctccctccctgcctccctttcctttaccccccctttccagcttttt
gatctcactgctggcactgccggacttaccttctccctccctccctccct
ccctccctcccttctccagGCGTTCCCGTCGTCCCTCGGCTTGTCGAGAC
AGCCCGACGGACGCTGCGTGTGGAGGCGCGACGACAACGAGCCGCCGCCG
CGGCAGCAGCAGCAGCAGCAGGGGAAGGGAAAGGAGGAGGAAGAGGAGGA
AGAGGAGGGGAAAGAGAGAGGGAGTGGCCACCAGCAGTGGAGGAAGGGAT
GGAGgtacattccacggattcgtctctcaagtagccgccctcccctccct
ccctcatttccctcctttcttctctccgtttcaatattctccaatccccc
tcgctccctccctccctccctccctccctcagGAGATTGTAACAGACAGG
GTGCACGGTGCCATGACGTTAATGAGCTGGGCGGTGGCCGTCCTTGGGAC
ATGGGCCAGGGAGGGCGGGAGGGAAGGGGGGAGGGAGGAGGAGGAGTGGA
AGGAGGAAGCGAAAGATCTGGGGTGGGCCTTGACTAGGCTGAGGCCGgta
aagagggagggagggagggagggagggaggacggaatcaggttcgacgtg
tttcttgacggaaaatccaaaaaatcttgtgatgattccgtccttaccat
cctccctccctccctccctccctcccgccctccctccctcctccttccag
TCCATGACGGCCATCGAAAGCGGCATCGCCCACGTCCTTTCCTCCGCCCT
CTCGCCCTCCCTCCCTCCCTCCCTCCCTTCTTCCTTCCTAGCGCGTCTAG
AAGACGAGGCTTGTGTCACGTTTCCGTTGTTTTTGAAGGGGAGGAAGGAG
GAACTGAAGGAGGGGGGGGTCTCTCTTCTCCTCTCTGCGTATGACGACTC
GAAGAAGAGGGGTGAGAGGAGGACGGGAGGGAGGGAGGGGGGGAGGGGGC
TGACGATTATGACGCTATCGTTGTCGTCGACTGTGATGGAGGTAATGGAG
GGATTCAGAAAGAGGTTGGAGGAGGAGGAGGAGGAAGGGAGGGAGGAAGG
GGGAGGAGAAGTGAAGGTGgtgagtggggagggagggagagaaggaggga
gggagagagaaataagggagggagggagggagggagggagggagggagat
caacctgtggtctgtagctgagaagagtcactcaaattcatccgtcaatg
gtacactcacgccgcagcccctctctccgtcctttccaccctccctccct
ccctccctccctccctccctccctgtgtcagATCGTCTGCGAGTCCCGGC
CACTTTTTGAAGGCGCTCGCACCGTAAAAATGCTGCGGGAGATGGGGTAT
ACGGATGTGATGCTCATCACCGACGCACAGgtagggagggagggagggag
ggcagaatttcactttcacaccgcacacgcaattcttactctcctccctc
ctcctctccctccctccctccctccctccctccctccctccctccctccc
tcaagATGGGGATCTTCGCCCAACTCGCCAACCTTTGCCTACTAGGGGCC
GACAGCCTCCTCGTTCCCCCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCC
TCCCTCCCCGCCTATGGCCATCAATAAGGCTGGCTCTCTGCCCCTGGCAT
TGTGCTGTCAACATTTCGGAGTGTCTGTCTACGTCCTCTCAAGCGAGCTC
AAGgtacgtccctctctcctttcaacccttcttccctccttccctccctc
cttcaacgctcccctcccttctttcctttcctcttcccaccccccctctc
ttctgccctccctccttcctcccttggcagccacacggctttttcctttt
tctccacatcacgaccaaaatgaatcattgtacctccccggcctccgccc
aaccgtccctctgtccctcccgccctttctccctccctccctctctgcct
agATCTCCTCCTCCTCGCACTCCTTCTCGCCCTTGGCCATGGAAGCCATG
AGTCGAGAGGAAGTGACAGAAGACTGTGCTGTCGGGAGACTGCTTGAGgt
gagcgaagggagggagggagggagagagggagggagggatgggaaatgga
agatatacgaaataggaaacatattttctctttctttttgatttgttttt
aaatgaaaaggagcaccgcaactgaaaattttcatccgtatgtatcgaag
ccagactttttcatttattcacgttggtgtttctcgatatgctctttgcc
ccttcctccatcccccctctcctccttccctccctctagCCCTTCCTCGA
TGGCGTTGAGATATCAAATGTCTACTTCGAGGGTCTTCCTCTGGGAGAGA
GAGAAAGAACGAAAGGAGGAGGGGGAGGAGGAGGAGTGGTGACAGCGGTA
GTAATGGAGGGCGGGGTATGCAAGGACGTTCGAGAAAGgtgaggggaaag
ggaggatggatggagggaagtggaaagagggggtttcaacttttaaggct
gatacctaatgagagaatagtgagaggacttgtcccttgataaacgcata
cactatccaaaataatttacagGGCCGAGCGGCGGAAGGAGGCCTTTGAG
GCACTCTTCTATGGGTGA
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protein sequence of NO28G01710.1

>NO28G01710.1-protein ID=NO28G01710.1-protein|Name=NO28G01710.1|organism=Nannochloropsis oceanica|type=polypeptide|length=594bp
MSATPTSSSSPPTTTRPPTPPPRPSQPRRPHKQVATAIVRDPKTGLFLAL
KRSDKVGSFQRHWHFISGGMEMDDDNDVLRRAYTELEEEVQLKREHLCLV
AQGRPLLVAIEGRLGNGKILVHPVLFDLVQPYHGPPLDESVLNWENVDIR
WMSLEALNGVPVVPRLVETARRTLRVEARRQRAAAAAAAAAAGEGKGGGR
GGRGGEREREWPPAVEEGMEEIVTDRVHGAMTLMSWAVAVLGTWAREGGR
EGGREEEEWKEEAKDLGWALTRLRPSMTAIESGIAHVLSSALSPSLPPSL
PSSFLARLEDEACVTFPLFLKGRKEELKEGGVSLLLSAYDDSKKRGERRT
GGREGGRGLTIMTLSLSSTVMEVMEGFRKRLEEEEEEGREEGGGEVKVIV
CESRPLFEGARTVKMLREMGYTDVMLITDAQMGIFAQLANLCLLGADSLL
VPPLPPSLPPSLPPSPPMAINKAGSLPLALCCQHFGVSVYVLSSELKISS
SSHSFSPLAMEAMSREEVTEDCAVGRLLEPFLDGVEISNVYFEGLPLGER
ERTKGGGGGGGVVTAVVMEGGVCKDVRERAERRKEAFEALFYG*
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Synonyms
Publications