NO28G01580, NO28G01580 (gene) Nannochloropsis oceanica

Overview
NameNO28G01580
Unique NameNO28G01580
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2925
Alignment locationchr28:501669..504593 -

Link to JBrowse

Properties
Property NameValue
DescriptionMethyltransferase family
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr28genomechr28:501669..504593 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0015165pyrimidine nucleotide-sugar transmembrane transporter activity
GO:0016740transferase activity
GO:0008168methyltransferase activity
Vocabulary: Biological Process
TermDefinition
GO:0090481pyrimidine nucleotide-sugar transmembrane transport
GO:0032259methylation
Vocabulary: Cellular Component
TermDefinition
GO:0000139Golgi membrane
GO:0016021integral component of membrane
GO:0016021integral component of membrane
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR007271Nuc_sug_transpt
IPR008166DUF23
Homology
BLAST of NO28G01580 vs. NCBI_GenBank
Match: EWM28062.1 (methyltransferase family [Nannochloropsis gaditana] >EWM28063.1 methyltransferase family [Nannochloropsis gaditana])

HSP 1 Score: 418.7 bits (1075), Expect = 4.700e-113
Identity = 226/472 (47.88%), Postives = 310/472 (65.68%), Query Frame = 0
Query:  459 RFSALIILGLLYMSTANNISVTLATKGLVEGG---KAEGKMFAAKDMTQESDVDQMVVDEVGAAGVL----IEPAKKNEVEGEDKDVLLISPESRTSVQLSN--EAGAEEGQGYASAVSTAFSGG------MSEELRQSYFNSFLDELTSSDDGLLKAAAVTLARKTKGGTCNLEKDRVPDPWNPNDGVRRDIGLCIAIKSDAGILDEHIAFHWAQGVRKFIIYDDGSNDNPWSVLEKYVALGIVEYHDMAGHWQASSFALQLKVLNECFTTFRERGPEDGIRWVMFTDLDEFVLSSVPGETLSDTLNAKYKGEACLQIARTWYGSSFYHQKPVGLVTETYILASPDHADGM--PKLIANIHPENRTRNATALFSVHDFVNQTVIPCLLKKDVKDVRINHYLRSLEEYDKKALAVNTQKEKYMDPLKKFFKRDWNTHLSLAASTYACQVHALLVQVQEMQGAGKIPAVVRPK 914
            +++ L+++  L ++ A+  S TL    L   G   KA+G +    D + +   D  V +     G+     ++ A    +EG ++ V   +    T    S+  E+ A   Q  A  +S   S G      +SEEL QSYF SF+  L+SSDD L+K A   LARK K G CN++  +  DPWN +DG RRD+ +C+ I +DAGI+DE+IAFHW Q V KF+IYDDGS+DN WSVLEKYVALGIVEYH+++G     +  LQ + +N+CFT  RER  E+G+RW+ F D DEFVLSS+P ETLS+TLN  Y GEACL+I RTWYGSSF H+KP  LVTETY++AS D+  G+  PKLIANI+PE +  NATAL  +H+F ++  I C  ++++KD+RINHYLRSLEEY +K++  +   E   +PLK+FF+RD+N   S  A+ Y+C+VHALL Q+Q+M+ AGKIPAV RP+
Sbjct:   35 KYATLMLMSALILTCASMKSKTLEGLFLPGPGRTQKADGNIMMHTDSSLQGS-DAEVSESSSKQGMEEANDLKTASPLNLEGGNRQVAFATARGDTPSFSSDLVESPAPLSQEGAQYISGGASPGVRPNTTLSEELSQSYFASFIKNLSSSDDPLIKTAGAILARKQKHGNCNIDDAKDVDPWNRHDGFRRDVAICMQISNDAGIMDEYIAFHWVQDVGKFVIYDDGSSDNIWSVLEKYVALGIVEYHNISGSPIHGTVNLQTRAMNKCFTMLRERAVEEGLRWIAFPDTDEFVLSSIPNETLSETLNKNYVGEACLRIHRTWYGSSFQHKKPSSLVTETYLMASNDYGGGIWNPKLIANIYPEGKPMNATALTVIHNFKDEDKIQCKPQQEIKDIRINHYLRSLEEYSEKSVYKDVMHEWLKEPLKQFFRRDFNLVSSPIAADYSCRVHALLKQIQKMKHAGKIPAVRRPE 505          
BLAST of NO28G01580 vs. NCBI_GenBank
Match: EWM26561.1 (methyltransferase family [Nannochloropsis gaditana])

HSP 1 Score: 407.9 bits (1047), Expect = 8.300e-110
Identity = 221/478 (46.23%), Postives = 301/478 (62.97%), Query Frame = 0
Query:  453 NSISIRRFSALIIL-GLLY------MSTANNISVTLATKGLVEGGKAEGKMFAAKDMTQESDVDQMVVDEVGAAGVLIEPAKKNEVEGEDK-DVLLISPESRTSVQLSNEAGAEEGQGYASAVSTAFSGGMSEELRQSYFNSFLDELTSSDDGLLKAAAVTLARKTKGGTCNLEKDRVPDPWNPNDGVRRDIGLCIAIKSDAGILDEHIAFHWAQGVRKFIIYDDGSNDNPWSVLEKYVALGIVEYHDMAGHWQASSFALQLKVLNECFTTFRERGPEDGIRWVMFTDLDEFVLSSVPGETLSDTLNAKYKGEACLQIARTWYGSSFYHQKPVGLVTETYILASPDHADGM--PKLIANIHPENRTRNATALFSVHDFVNQTVIPCLLKKDVKDVRINHYLRSLEEYDKKALAVNTQKEKYMDPLKKFFKRDWNTHLSLAASTYACQVHALLVQVQEMQGAGKIPAVVRPKAWNETHT 921
            N I+ R  SAL+I+   LY       + ++ +++  A+K +     ++     A D     D+++    E+  +    E + +  V    + D   +S    TS  L +E  A+     +S +    SG  SEELR++Y  SF++EL SSDD ++K A   LA K K G C ++  +  DPWN  DGVRRDI +C+ +K++A ILDE+IAFHW QGV KF+IYDD S DNPWSVLEKYVALGIVEYH+M GH   SS  LQ+  LN C  + R+R  E+G+RW+ F D DEF LSSVP E+LS+TLN  Y+GEACL I RTWYGSSF H+KP GLV ETY++AS D+  G+   KLIANI+PE +  NAT L +VH F  +  + C  +  ++DVR+NHYLRSLEEY  KA   + + +    P ++FF+RD+N   S  A+ YAC+VHALL Q+++M+  GKIPA  RP  WN T+T
Sbjct:   25 NKITGRFLSALVIMYAFLYFDILGGFAVSDRVNIQEASKAMQALPMSKASDSVAPDSRNFLDLEE-ANQELPPSLPQTEQSNQQIVSATTRDDASSVSAGPVTSQALLHEKDAQTSLNASSGMPVNTSG--SEELRRNYRASFIEELNSSDDLVMKTAGAVLAHKQKHGDCKIDVHKEADPWNKLDGVRRDIAVCMVLKNEARILDEYIAFHWLQGVSKFVIYDDASQDNPWSVLEKYVALGIVEYHNMTGHPNPSSSKLQITSLNTCSKSLRQRAEEEGLRWIAFIDADEFALSSVPNESLSETLNKNYRGEACLAIHRTWYGSSFQHKKPSGLVIETYLMASSDYGGGIWNGKLIANINPEGKAINATTLSTVHSFRKEDNVSCKSQTTIRDVRVNHYLRSLEEYSTKAYHNHNKPQLEETPFERFFRRDFNLVSSPIAADYACRVHALLQQIEDMKTTGKIPAAERPGPWNGTYT 499          
BLAST of NO28G01580 vs. NCBI_GenBank
Match: CBJ32491.1 (glycosyltransferase [Ectocarpus siliculosus])

HSP 1 Score: 131.3 bits (329), Expect = 1.500e-26
Identity = 91/284 (32.04%), Postives = 133/284 (46.83%), Query Frame = 0
Query:  636 IGLCIAIKSDAGILDEHIAFHWAQGVRKFIIYDDGSNDNPWSVLEKYVALGIVEYHDMAGHWQASSFALQLKVLNECF---TTFRERGPEDGIRWVMFTDLDEFVLSSVPGETLSDTLNAKYKGEACLQIARTWYGSSFYHQKPVGLVTETYILAS---PDHADGMPKLIANIHPENRTRNAT--ALFSVHDFVNQTVIPCLLKK--DVKDVRINHYLRSLEEY-DKKALAVNTQKEKYMDPLKKFFKRDWNTHLSLAASTYACQVHALLVQVQE---MQGAGK 906
            + +C+  K  A  L E IAFH+A GV +  IYDD S DN   VL  +V  GIV Y              Q+K LN C       R RG ED   WV+F D DE++  S     + D L  K+    C  ++R  YGS+ + + P GL+ E +++ S   P   +G+ K++ N+ P           L S+H   N     C   K   V D+RINHYL S+ +Y D+       +K+  M   K   +RD N + S     +AC    +L ++ E   ++G G+
Sbjct:    3 VAICLRTKDFARFLPEWIAFHYALGVDEIFIYDDDSTDNTEEVLWPFVEAGIVRYIFEV----IFDRMTQMKPLNHCLEQQLERRSRGDEDAATWVLFHDTDEYLYPSDTSLNIRDALE-KHHRTCCALVSRVQYGSAGHDEMPRGLLLENFLMHSHPGPQFGNGLAKVMVNLDPSEPEVGVVEPPLRSMH---NAEGCDCAGSKFGGVSDLRINHYLGSIGDYMDRTTRYWEAKKKGEMAAAKTVLRRDINNYRSDDIEHWACATREVLFRIVEGLDLEGGGE 278          
BLAST of NO28G01580 vs. NCBI_GenBank
Match: CBJ29801.1 (glycosyltransferase [Ectocarpus siliculosus])

HSP 1 Score: 121.7 bits (304), Expect = 1.200e-23
Identity = 89/276 (32.25%), Postives = 135/276 (48.91%), Query Frame = 0
Query:  633 RRDIGLCIAIKSDAGILDEHIAFHWAQGVRKFIIYDDGSNDNPWSVLEKYVALGIVEY-HDMAGHWQASSFALQLKVLNECFTTFRER---GPEDGIRWVMFTDLDEFVLSSVPGETLSDTLNAKYKGEACLQIARTWYGSSFYHQKPVGLVTETYILASPD---HADGMPKLIANIHPENRTRNATALFSVHDFVNQTVIPCLLKKDVKDVRINHYLRSLEEYDKKALAVNTQKEKYM----DPLKKFFKRDWNTHLSLAASTYACQVHALLVQV 898
            R+++ +C+  K     L E +AFH+A GV +  IYDD S D    VL+ +V+ GIV Y  DM     A     Q++ LN C   +  R    PE+   W++F D DE+V       TL D LN K++   C  + R  YGS  + + P GLV ++++    D   HA+  PK++ N+ P      A  L S+H         CL  K  ++V INHYL S  +Y ++   V+     YM    DP  +  +RD N  +S   + ++C    +L +V
Sbjct:  173 RKEVAVCLRTKDYGRFLPEWVAFHYAIGVDEVSIYDDNSVDQTSEVLKPFVSAGIVRYIFDMIPRRNA-----QMEPLNRCLRHYINRKKDDPENAPSWLLFHDNDEYVYPRDTSMTLFDALN-KHESTCCALVRRIQYGSGGHDEMPRGLVMDSFMAHQNDSSHHAN--PKVVVNLTPTESDPVAPPLKSMH---KAEGCACLDLK--QEVLINHYLGSRGDYLER---VHRYWSTYMAGDNDPGHRLSQRDVNDRVSDTITHWSCSTREVLYRV 432          
BLAST of NO28G01580 vs. NCBI_GenBank
Match: CBJ29738.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 109.0 bits (271), Expect = 8.000e-20
Identity = 80/307 (26.06%), Postives = 135/307 (43.97%), Query Frame = 0
Query:  636 IGLCIAIKSDAGILDEHIAFHWAQGVRKFIIYDDGSNDNPWSVLEKYVALGIVEY-HDMAGHWQASSFALQLKVLNECFT--TFRERGPEDGIRWVMFTDLDEFVLSSVPGETLSDTLNAKYKGEACLQIARTWYGSSFYHQKPVGLVTETYILASPDHADGMPKLIANIHPENRTRNATALFSVHDFVNQTVIPCLLKKD----------------------------VKDVRINHYLRSLEEYDKKALAVNTQKEKYMDPLKKF-FKRDWNTHLSLAASTYACQVHALLVQVQEMQGAGKIPAVV 911
            +  C+  K     L E IA+H+A GV +  IYDD SND+   +L+ +V  GIV Y  +  GHWQ      Q+  LN C      R     D  RW++F D DE+++      T++  L+ K+    C+++ R  YG+  + + P GL+ E ++  +  H     +L       ++T   ++   +  F+   ++  ++  D                            V ++RINHYL S  +Y  K      Q+    D ++K+  +RD N+  S   +T+AC    +L  V E     K+  V+
Sbjct:  182 VAACVRTKDFGRFLPEWIAYHYAIGVDEITIYDDDSNDDTVEILQPFVDAGIVTYVLERTGHWQN-----QMTPLNRCLEEHMVRRLSDNDAPRWLLFHDTDEYIVPVDTSVTIAQALD-KHSSTCCVRVPRVTYGAGGHDEMPQGLLLEAFLQHAHLHDFKSNRLPKRALAGDKTVPTSSGGGLSLFLENQMLQVMVNLDTTQPLLGQATSRLKSMHNGQGCLCDVIPVDEIRINHYLGSRGDYLGKTKRY-WQEVYSRDKVEKWLMERDMNSFKSDTITTWACATREVLSIVLEGGDLNKVLPVM 481          
BLAST of NO28G01580 vs. NCBI_GenBank
Match: WP_006634265.1 (FkbM family methyltransferase [Microcoleus vaginatus] >EGK86131.1 methyltransferase FkbM family [Microcoleus vaginatus FGP-2])

HSP 1 Score: 99.8 bits (247), Expect = 4.800e-17
Identity = 89/310 (28.71%), Postives = 134/310 (43.23%), Query Frame = 0
Query:  583 YFNSFLDELTSSDDGLLKAAAVTLARKTKGGTCNLEKDR-VP-DPWNPNDGVRRD-------------------IGLCIAIKSDAGILDEHIAFHWAQGVRKFIIYDDGSNDNPWSVLEKYVALGIVEYHDMAGHWQASSFALQLKVLNECFTTFRERGPEDGIRWVMFTDLDEFVLSSVPGETLSDTLNAKYKGEACLQIARTW--YGSSFYHQKPVGLVTETYILASPDHADGMPKLIANIHPENRTRNATAL--FSVHDFV------------NQTVIPCLLKKDVKDVRINHY-LRSLEEYDKKAL 855
            Y  S  D L +S+     AAA+   R       NL+K++ +P DPWN    +R +                   + +C  +K++A  L E + FH   GV +F +Y++ S DNP+ +++ Y+  G V +HD    W       QL+    C  T+R+     G  W+ F DLDEF L     + L + L   Y    C  +A  W  +GSS +  +P GL  E +         G+ +   N H ++  R   A+   S HDF                V P      V+ +RINHY  RSL+E  +K L
Sbjct:  878 YILSQCDVLATSNSTFSFAAAMLNKRCKFFFRPNLQKNKLIPFDPWNSEPLLRDNPHGEPASQPDQENIRNKCKLSVCAILKNEAPYLIEWLEFHKIVGVERFYLYNNNSTDNPFDIVQPYIKSGEVIWHD----WPL--IPGQLQAYEHCLETYRQ-----GSEWIAFIDLDEF-LFPTEKDDLKEVLEEFYD---CPAVAVNWLVFGSSGHKTRPEGLQIENFT------KRGVNEWEINKHIKSIVRPVEAMRPLSPHDFTYLNDRVAITENKEPIVGPWSTTNSVQKIRINHYTTRSLQENKEKML 1166          
BLAST of NO28G01580 vs. NCBI_GenBank
Match: WP_013989346.1 (hypothetical protein [Weissella koreensis] >AEJ23363.1 hypothetical protein WKK_02445 [Weissella koreensis KACC 15510])

HSP 1 Score: 91.7 bits (226), Expect = 1.300e-14
Identity = 79/279 (28.32%), Postives = 125/279 (44.80%), Query Frame = 0
Query:  636 IGLCIAIKSDAGILDEHIAFHWAQGVRKFIIYDDGSNDNPWSVLEKYVALGIVEYHDMAGHWQASSFALQLKVLNECFTTFRERGPEDGIRWVMFTDLDEFVLSSVPGETLSDTLNAKYKGEACLQIARTWYGSSFYHQKPVGLVTETYILASPDHADGMPKLIANIHPENRTRNATALFSVH--DFVNQTV---------IPCLLK-----KDVKDVRINHYL-RSLEEYDKKA---LAVNTQKEKYMDPLKKFFKRDWNTHLSLAASTYACQVHALL 895
            +G+   +K+++  L E I FH   GV  F IYD+ S+DN   VL+ Y+  G+V+Y  + G  Q      QL V NE    +R     + +RW+   D DEF++  V  E + D +N+     + + +    YGS+   +KP GLVT+ +      HA    + IA+  P    R    + S H    + +T+          P   K          +RINHY  +SLEE+ KK+    A N   ++    +  F + D N       + Y+  +H  L
Sbjct:   56 LGVVAIVKNESPYLKEWIEFHKLVGVDIFYIYDNESDDNIMEVLQPYIDQGLVKYKFIKGKKQ------QLAVYNEAIEQYR-----NDVRWLAIIDADEFIV-PVEKENILDMMNSLDISFSQILVGWLIYGSNGLKKKPKGLVTDNF----KYHA--RSEFIADYKPILNPRLVLKVGSPHWATIIGKTIDENGKRIWNYPYHTKIYAEPASKNKIRINHYYSKSLEEFIKKSKRGYADNGSSDRLARDMDAFHEHDQNYVTDTVINKYSDMLHKRL 316          
BLAST of NO28G01580 vs. NCBI_GenBank
Match: WP_096831305.1 (FkbM family methyltransferase [Tychonema bourrellyi] >PHX57419.1 FkbM family methyltransferase [Tychonema bourrellyi FEM_GT703])

HSP 1 Score: 91.7 bits (226), Expect = 1.300e-14
Identity = 87/310 (28.06%), Postives = 136/310 (43.87%), Query Frame = 0
Query:  583 YFNSFLDELTSSDDGLLKAAAVTLARKTKGGTCNLEKDR-VP-DPWNPNDGVRRD-------------------IGLCIAIKSDAGILDEHIAFHWAQGVRKFIIYDDGSNDNPWSVLEKYVALGIVEYHDMAGHWQASSFALQLKVLNECFTTFRERGPEDGIRWVMFTDLDEFVLSSVPGETLSDTLNAKYKGEACLQIARTW--YGSSFYHQKPVGLVTETYILASPDHADGMPKLIANIHPENRTRNATAL--FSVHDF--VNQTVI----------PCLLKKDVKDVRINHYL-RSLEEYDKKAL 855
            Y  S  D L +S+     AAA+   R       NL+K++ +P DPWN    +R +                   + +C  +K++A  L E + FH   GV +F +Y++ S DNP+ +++ Y+  G V +H+    W  S    QL+    C  T+R+        W+ F D+DEF L     + + + L   Y   A   +A  W  +GSS +  +P GL  E +         G+     N H ++  R   A+   S HDF  +N  V           P      V+ +RINHY+ RSL+E  +K L
Sbjct:  655 YILSQCDVLATSNSTFSFAAAMLNERCKFFFRPNLQKNKLIPFDPWNSEPLLRENPSQKQTFYPQQEIICNKCKLSVCAILKNEAPYLIEWLEFHKIVGVERFYLYNN-STDNPFDIVKPYIESGEVIWHE----W--SLIPGQLQAYEHCLETYRQAS-----EWIAFIDMDEF-LFPTEKDDIKEVLEEFYDSPA---VAVNWLVFGSSSHKTRPEGLQVENFT------KRGLDDWEINKHIKSIVRPVEAIRPDSPHDFRYLNDRVATTENKEPIVGPWSTVNSVQKLRINHYMTRSLQESQEKML 942          
BLAST of NO28G01580 vs. NCBI_GenBank
Match: OGE24402.1 (hypothetical protein A3J42_06915 [Candidatus Dadabacteria bacterium RIFCSPHIGHO2_12_FULL_53_21])

HSP 1 Score: 88.6 bits (218), Expect = 1.100e-13
Identity = 78/279 (27.96%), Postives = 113/279 (40.50%), Query Frame = 0
Query:  636 IGLCIAIKSDAGILDEHIAFHWAQGVRKFIIYDDGSNDNPWSVLEKYVALGIVEYHDMAGHWQASSFALQLKVLNECFTTFRERGPEDGIRWVMFTDLDEFVLSSVPGETLSDTLNAKYKGEACLQIARTWYGSSFYHQKPVGLVTETYIL------------------------ASPD---HADGMPKLIANIHP----------ENRTRNATALFSVHDFVNQTVIPCLLK-KDVKDVRINHYLRSLEE--YDKKALAVNTQKEKYMDPLKKFFKRD 875
            + +C   +++A  L E I FH   GV  F +Y++ S+D+   VL+ YV  G V   D    W  S+   Q  V  EC     ER  +D  RW+ F DLDEF+ +  P       +  +Y+G   + +    YGSS   +KP GLV E Y +                         SP    + DG P +  N  P           +  R  TA+         T   C +K   V  +RINHYL   EE   D      + +K   +D +K + + D
Sbjct:   20 LSVCAIFRNEAEYLREWIEFHGLNGVGHFYLYNNQSDDDYLPVLKDYVDRGTVTLRDWPERWAGST---QRNVYGECI----ERDGKDS-RWIAFIDLDEFLFA--PNAENLPAVLREYEGFPGIVVNWQIYGSSGLKKKPDGLVIENYTMKAGTGWIGNKSVKSIVDPAKALRPISPHVFAYRDGEPAVTENFEPVRIVRTGRIIRSLKRRITAILPRFPVDPYTSYLCDIKGVSVNKLRINHYLVKSEEEALDDLKRHNHNRKVSLIDKMKYYDRND 288          
BLAST of NO28G01580 vs. NCBI_GenBank
Match: WP_071782902.1 (FkbM family methyltransferase [Planktothrix rubescens])

HSP 1 Score: 88.2 bits (217), Expect = 1.500e-13
Identity = 65/230 (28.26%), Postives = 103/230 (44.78%), Query Frame = 0
Query:  636 IGLCIAIKSDAGILDEHIAFHWAQGVRKFIIYDDGSNDNPWSVLEKYVALGIVEYHDMAGHWQASSFALQLKVLNECFTTFRERGPEDGIRWVMFTDLDEFVLSSVPGETLSDTLNAKYKGEACLQIARTWYGSSFYHQKPVGLVTETYILASPDHADGMPKLIANIHPENRTRNATALFSVHDFV---NQTVI---------PCLLKKDVKDVRINHY-LRSLEEYDKK 853
            + +C  +K +A  L E + FH   GV +F +YD+ S+D+   ++E Y+  G+V +H+    W       QL     C   ++E        WV F DLDEF L     + L   L   Y+    + +    +GSS +  +P GL  E +   + D  +    + + + P    +NA      H F+   NQ  +         P      VK +RINHY +RSL+EY +K
Sbjct: 1101 LSICAILKDEAPYLIEWLEFHQIVGVERFYLYDNSSSDHAKDLVESYIKSGVVVWHE----WPI--IQGQLPAYKHCLQNYQEE-----TEWVAFIDLDEF-LFPTEDDDLRKVLE-DYRDYPAVVVNWLVFGSSGHQVRPEGLQIENFTKRAVDEWETNKHIKSIVCP----KNAICPQEPHSFIYLDNQLAVTENKQSLFGPWSETHSVKRLRINHYTIRSLQEYQEK 1313          
The following BLAST results are available for this feature:
BLAST of NO28G01580 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM28062.14.700e-11347.88methyltransferase family [Nannochloropsis gaditana... [more]
EWM26561.18.300e-11046.23methyltransferase family [Nannochloropsis gaditana... [more]
CBJ32491.11.500e-2632.04glycosyltransferase [Ectocarpus siliculosus][more]
CBJ29801.11.200e-2332.25glycosyltransferase [Ectocarpus siliculosus][more]
CBJ29738.18.000e-2026.06conserved unknown protein [Ectocarpus siliculosus][more]
WP_006634265.14.800e-1728.71FkbM family methyltransferase [Microcoleus vaginat... [more]
WP_013989346.11.300e-1428.32hypothetical protein [Weissella koreensis] >AEJ233... [more]
WP_096831305.11.300e-1428.06FkbM family methyltransferase [Tychonema bourrelly... [more]
OGE24402.11.100e-1327.96hypothetical protein A3J42_06915 [Candidatus Dadab... [more]
WP_071782902.11.500e-1328.26FkbM family methyltransferase [Planktothrix rubesc... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR065ncniR065Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR101ngnoR101Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO28G01580.1NO28G01580.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|533760gene_9891Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO28G01580.1NO28G01580.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO28G01580 ID=NO28G01580|Name=NO28G01580|organism=Nannochloropsis oceanica|type=gene|length=2925bp
CAGCACTTCCACTACATAGGACGATAACACATACAACACGACAATAGGCA
CAAGCCTATCCAGCCCTTCAATGCGCAAACATCTTTCTGATGGCAGCCAC
TCGATCCGCCCCCACTATGGAGCAAATGCCACCTGTCTATGGGCGGCCAA
GAGGTCCACGTCCATCCCTGATGATGTCCACGTCCCTGCTCCTGCTGCAG
GCCGTTGTACCCTTGGTCCATCGCAGCTCTCACAAGAGTAGCCCTCGACT
GGAGCCGCCGTCGTTGAATCGAGAAGGATTCATGGATGTGAGATCACGCG
AGGCTAACCACCATCCTGCCTCTGTGGCACTCTTGGCGGAGGCATTCAAG
TGTCTCGGGGCATTGGCGTGTCATTATCTTGTGGTACAGCGGTGTCCGGA
TGCCACTGTGGGTCAAGTAGTCAGACACACCTCTAGTTGTTTTCTCGGAG
CCGTTGTGAGACAGTCGGCATTGATCCTGCCAGCTCTTCTTTACTTCTTC
TCCGATGTCCTCGTCCTGAATGCATTGTCGCACCTCCGTTTCTCCATATT
ATTGGTCATGATAAATTTCCGCATACTCGTTGTGGCATTCTTATCCGCTC
CATTTCTCCACCAGCACTTGAACGGGGGAGAATGGCGGGGCATTATCATT
CTGGTGTGTGCAGCTACGATTCTCTGTCTGGAGGACGTCAAGATGGACAG
ATATGTTTTCTTCCTTCAAGAATCGATAGGCATTATTCTTGCTACGGCCA
CAGTTCTGACCTCTGCAGTTGCAGGCATGATGGTGGAAAAATACTTGAAT
GCGGATGGCGGTGCAAAAGATCATGGTTCGCCTCCAGGCACAGTGGTATC
GCGCACAGACAACGACATAGACAACAGCGCTGAGTCTACGGCTTCTCAAA
AAGACCAATCCTCTATGCGGTGGGAACAACAAACAGTCTTATCCTTATTT
GGTGTGATCTTTGCGGTTGTCCATGTGATCGTTTTCGACGCGGAGACGCT
TCAAGCTGAGCAGTTCTTCCGAGGGTGGAATGGAACAACCGTTCTCCTGA
CCATCCTGTCGGCGGCAGAAGGCTTGGTGGTGGCCATCACCATCCAGAAA
TACGGTGTGCTGACTCGCCTGGTCCTTGGCAGGGTTGCCTTATGTCTCTG
TGCTCTACTAGAAGGCATGCTATTCAAGGAACCTCTCCTATTCCAGGAGC
TGCTGGCAATCGTCTTCGTAGTCACCGGCGTCAATCTCTACTTCACTGCC
GGCGGCTTTTCCTCTTCTTCCTCGGCCCATCCTTCTTCCTTCGAGGGAAT
ATCAGACGACGCTAAGTGCAGGACTGGTAGTAAGTGGGAAGATCAAGGGC
AAGGGCTGGCGCACAAAGACAAGCATGAGGCCAGGCCCCATCCAAGCAGC
AGATTTCCCTCGCTACGTGCTGTCTCCTTATTTAAGAACGCCGAAAACAG
CATTAGCATACGGCGGTTTTCCGCTTTGATTATATTGGGTCTACTATATA
TGTCTACTGCGAACAACATTTCTGTCACGCTTGCTACCAAAGGCTTGGTG
GAGGGAGGCAAGGCTGAGGGCAAGATGTTTGCGGCAAAAGACATGACCCA
GGAGAGCGACGTAGACCAAATGGTGGTCGATGAAGTAGGAGCAGCGGGGG
TTCTGATAGAGCCAGCGAAGAAAAATGAGGTTGAGGGTGAGGACAAGGAC
GTGCTGCTGATATCGCCGGAATCTCGGACGTCGGTACAGTTATCAAACGA
GGCAGGGGCGGAGGAAGGGCAGGGTTATGCGTCAGCAGTCTCCACGGCCT
TCAGTGGCGGCATGTCCGAGGAACTGCGCCAGAGTTACTTCAATTCGTTC
TTGGACGAGTTGACTTCGTCAGACGATGGATTGCTCAAAGCTGCGGCTGT
TACTCTGGCTCGGAAGACGAAAGGCGGGACATGCAATTTGGAGAAGGATA
GAGTGCCCGATCCATGGAACCCGAACGATGGGGTCCGCCGGGATATCGGC
CTATGTATCGCGATCAAATCTGACGCGGGCATCCTTGATGAACACATTGC
TTTTCACTGGGCGCAAGGTGTAAGGAAGTTTATTATTTACGACGATGGCT
CGAATGACAATCCATGGTCAGTTTTGGAGAAGTATGTGGCTCTTGGCATC
GTTGAATACCACGACATGGCTGGTCATTGGCAAGCAAGCTCCTTCGCACT
CCAGCTGAAAGTACTGAACGAGTGCTTCACAACGTTTCGGGAGCGCGGGC
CAGAGGATGGGATACGATGGGTCATGTTTACTGACCTGGACGAATTTGTC
TTGTCATCCGTTCCCGGCGAGACCTTGTCCGACACACTCAACGCCAAGTA
CAAAGGAGAGGCGTGCTTGCAAATCGCGCGGACATGGTATGGGTCGTCGT
TTTACCATCAAAAGCCTGTCGGTTTAGTCACCGAGACGTATATTCTTGCG
TCTCCCGATCACGCCGATGGCATGCCTAAATTGATTGCGAACATTCACCC
GGAGAACAGGACTAGGAACGCCACAGCACTTTTCTCGGTCCATGATTTTG
TGAATCAAACCGTGATTCCTTGTTTACTCAAGAAAGATGTTAAGGACGTG
CGGATCAACCATTATTTGAGAAGTTTAGAGGAGTATGATAAAAAGGCTTT
GGCTGTCAATACCCAGAAAGAGAAATACATGGACCCGTTGAAGAAGTTTT
TTAAACGGGACTGGAATACGCATTTGAGTCTCGCTGCGTCGACTTATGCG
TGCCAGGTCCATGCTCTATTGGTACAGGTGCAGGAAATGCAGGGTGCGGG
GAAGATTCCAGCGGTGGTAAGGCCAAAGGCATGGAACGAGACTCATACAA
GGTAGGATATGAACTGAATGGGTAGAAATTGAAAGTTGATGCATGTATGA
ATGTAAACAACTGTAAAGGGGCTCG
back to top

protein sequence of NO28G01580.1

>NO28G01580.1-protein ID=NO28G01580.1-protein|Name=NO28G01580.1|organism=Nannochloropsis oceanica|type=polypeptide|length=922bp
MAATRSAPTMEQMPPVYGRPRGPRPSLMMSTSLLLLQAVVPLVHRSSHKS
SPRLEPPSLNREGFMDVRSREANHHPASVALLAEAFKCLGALACHYLVVQ
RCPDATVGQVVRHTSSCFLGAVVRQSALILPALLYFFSDVLVLNALSHLR
FSILLVMINFRILVVAFLSAPFLHQHLNGGEWRGIIILVCAATILCLEDV
KMDRYVFFLQESIGIILATATVLTSAVAGMMVEKYLNADGGAKDHGSPPG
TVVSRTDNDIDNSAESTASQKDQSSMRWEQQTVLSLFGVIFAVVHVIVFD
AETLQAEQFFRGWNGTTVLLTILSAAEGLVVAITIQKYGVLTRLVLGRVA
LCLCALLEGMLFKEPLLFQELLAIVFVVTGVNLYFTAGGFSSSSSAHPSS
FEGISDDAKCRTGSKWEDQGQGLAHKDKHEARPHPSSRFPSLRAVSLFKN
AENSISIRRFSALIILGLLYMSTANNISVTLATKGLVEGGKAEGKMFAAK
DMTQESDVDQMVVDEVGAAGVLIEPAKKNEVEGEDKDVLLISPESRTSVQ
LSNEAGAEEGQGYASAVSTAFSGGMSEELRQSYFNSFLDELTSSDDGLLK
AAAVTLARKTKGGTCNLEKDRVPDPWNPNDGVRRDIGLCIAIKSDAGILD
EHIAFHWAQGVRKFIIYDDGSNDNPWSVLEKYVALGIVEYHDMAGHWQAS
SFALQLKVLNECFTTFRERGPEDGIRWVMFTDLDEFVLSSVPGETLSDTL
NAKYKGEACLQIARTWYGSSFYHQKPVGLVTETYILASPDHADGMPKLIA
NIHPENRTRNATALFSVHDFVNQTVIPCLLKKDVKDVRINHYLRSLEEYD
KKALAVNTQKEKYMDPLKKFFKRDWNTHLSLAASTYACQVHALLVQVQEM
QGAGKIPAVVRPKAWNETHTR*
back to top
Synonyms
Publications