NO28G01510, NO28G01510 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO28G01510 vs. NCBI_GenBank
Match: XP_005854614.1 (hypothetical protein NGA_0165400, partial [Nannochloropsis gaditana CCMP526] >EKU21747.1 hypothetical protein NGA_0165400, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 149.8 bits (377), Expect = 9.400e-33 Identity = 78/100 (78.00%), Postives = 91/100 (91.00%), Query Frame = 0 Query: 64 QTPASVLGPGKAVVSFDTYKVAESLQEAGFSKGQAEAILRVVVAGMEESTLKSTAMIATRRDLLDLKTELSEKLFSSTMRFDVAQRHSKEVIEKDLMSVR 164 Q AS+LGPGKAVVSFDT K+ +SLQEAGFSK QA+ +LRV+VAGMEE TL+STAMIATRRDLLDLK++LSE+LF STMRFDVAQRH+KEVIE+DL S+R Sbjct: 29 QIHASLLGPGKAVVSFDTMKMCDSLQEAGFSKAQAQTVLRVLVAGMEECTLRSTAMIATRRDLLDLKSDLSERLFGSTMRFDVAQRHNKEVIERDLQSLR 128
BLAST of NO28G01510 vs. NCBI_GenBank
Match: EWM20651.1 (Protein of unknown function DUF1640 [Nannochloropsis gaditana]) HSP 1 Score: 149.8 bits (377), Expect = 9.400e-33 Identity = 78/100 (78.00%), Postives = 91/100 (91.00%), Query Frame = 0 Query: 64 QTPASVLGPGKAVVSFDTYKVAESLQEAGFSKGQAEAILRVVVAGMEESTLKSTAMIATRRDLLDLKTELSEKLFSSTMRFDVAQRHSKEVIEKDLMSVR 164 Q AS+LGPGKAVVSFDT K+ +SLQEAGFSK QA+ +LRV+VAGMEE TL+STAMIATRRDLLDLK++LSE+LF STMRFDVAQRH+KEVIE+DL S+R Sbjct: 76 QIHASLLGPGKAVVSFDTMKMCDSLQEAGFSKAQAQTVLRVLVAGMEECTLRSTAMIATRRDLLDLKSDLSERLFGSTMRFDVAQRHNKEVIERDLQSLR 175
BLAST of NO28G01510 vs. NCBI_GenBank
Match: POM72810.1 (Hypothetical protein PHPALM_10419, partial [Phytophthora palmivora var. palmivora]) HSP 1 Score: 84.3 bits (207), Expect = 4.900e-13 Identity = 40/87 (45.98%), Postives = 68/87 (78.16%), Query Frame = 0 Query: 79 FDTYKVAESLQEAGFSKGQAEAILRVVVAGMEESTLKSTAMIATRRDLLDLKTELSEKLFSSTMRFDVAQRHSKEVIEKDLMSVRYE 166 FDT+ V +SLQE GF+ GQ+EAIL+V+ M +S + ++AT+ + ++LK ELSE++F+ST++FD+AQRHS+E++E+D +++ + Sbjct: 83 FDTHNVVKSLQENGFTAGQSEAILQVMKDAMADSLEAQSRILATKSEHVELKAELSERVFNSTLKFDIAQRHSRELLERDFNTLKQD 169
BLAST of NO28G01510 vs. NCBI_GenBank
Match: XP_008891638.1 (hypothetical protein, variant [Phytophthora parasitica INRA-310] >ETI50186.1 hypothetical protein, variant [Phytophthora parasitica P1569] >ETK90069.1 hypothetical protein, variant [Phytophthora parasitica] >ETL43466.1 hypothetical protein, variant [Phytophthora parasitica] >ETL96649.1 hypothetical protein, variant [Phytophthora parasitica] >ETM49794.1 hypothetical protein, variant [Phytophthora parasitica] >ETN22374.1 hypothetical protein, variant [Phytophthora parasitica INRA-310] >ETO78909.1 hypothetical protein, variant [Phytophthora parasitica P1976] >ETP19950.1 hypothetical protein, variant [Phytophthora parasitica CJ01A1] >ETP47893.1 hypothetical protein, variant [Phytophthora parasitica P10297] >KUF78457.1 hypothetical protein AM587_10007003 [Phytophthora nicotianae]) HSP 1 Score: 82.0 bits (201), Expect = 2.400e-12 Identity = 39/87 (44.83%), Postives = 67/87 (77.01%), Query Frame = 0 Query: 79 FDTYKVAESLQEAGFSKGQAEAILRVVVAGMEESTLKSTAMIATRRDLLDLKTELSEKLFSSTMRFDVAQRHSKEVIEKDLMSVRYE 166 FDT+ V +SLQ+ GFS Q+EAIL+V+ M +S + ++AT+ + ++LK ELSE++F+ST++FD+AQRHS+E++E+D +++ + Sbjct: 79 FDTHNVVKSLQDKGFSPDQSEAILQVMKDAMADSLEAQSRILATKSEHVELKAELSERVFNSTLKFDIAQRHSRELLERDFNTLKQD 165
BLAST of NO28G01510 vs. NCBI_GenBank
Match: XP_024574894.1 (Uncharacterized membrane protein [Plasmopara halstedii] >CEG38525.1 Uncharacterized membrane protein [Plasmopara halstedii]) HSP 1 Score: 82.0 bits (201), Expect = 2.400e-12 Identity = 40/87 (45.98%), Postives = 66/87 (75.86%), Query Frame = 0 Query: 79 FDTYKVAESLQEAGFSKGQAEAILRVVVAGMEESTLKSTAMIATRRDLLDLKTELSEKLFSSTMRFDVAQRHSKEVIEKDLMSVRYE 166 FDT+ V +SLQE GFS Q+EAIL V+ M +S + ++AT+ + ++LK ELSE++F+ST++FD+AQRHS+E++E+D +++ + Sbjct: 54 FDTHHVVQSLQEKGFSIQQSEAILDVMKDAMADSLVAQARILATKSEHVELKAELSERVFNSTLKFDIAQRHSRELLERDFNTLKQD 140
BLAST of NO28G01510 vs. NCBI_GenBank
Match: XP_009519371.1 (hypothetical protein PHYSODRAFT_478596 [Phytophthora sojae] >EGZ24083.1 hypothetical protein PHYSODRAFT_478596 [Phytophthora sojae]) HSP 1 Score: 81.6 bits (200), Expect = 3.200e-12 Identity = 40/91 (43.96%), Postives = 68/91 (74.73%), Query Frame = 0 Query: 75 AVVSFDTYKVAESLQEAGFSKGQAEAILRVVVAGMEESTLKSTAMIATRRDLLDLKTELSEKLFSSTMRFDVAQRHSKEVIEKDLMSVRYE 166 A + FDT+ V +SLQE GF+ Q+EAIL+V+ M S + ++AT+ + ++LK ELSE++F+ST++FD+AQRHS+E++E+D +++ + Sbjct: 23 APLHFDTHNVVKSLQERGFTVDQSEAILQVMKEAMAASLEAQSRILATKSEHVELKAELSERVFNSTLKFDIAQRHSRELLERDFNTLKQD 113
BLAST of NO28G01510 vs. NCBI_GenBank
Match: XP_002901824.1 (conserved hypothetical protein [Phytophthora infestans T30-4] >EEY57214.1 conserved hypothetical protein [Phytophthora infestans T30-4]) HSP 1 Score: 81.6 bits (200), Expect = 3.200e-12 Identity = 39/87 (44.83%), Postives = 66/87 (75.86%), Query Frame = 0 Query: 79 FDTYKVAESLQEAGFSKGQAEAILRVVVAGMEESTLKSTAMIATRRDLLDLKTELSEKLFSSTMRFDVAQRHSKEVIEKDLMSVRYE 166 FDT+ V +SLQ+ GFS Q+EAIL V+ M +S + ++AT+ + ++LK ELSE++F+ST++FD+AQRHS+E++E+D +++ + Sbjct: 82 FDTHNVVKSLQDRGFSTDQSEAILHVMKDAMADSLEAQSRILATKSEHVELKAELSERVFNSTLKFDIAQRHSRELLERDFNTLKQD 168
BLAST of NO28G01510 vs. NCBI_GenBank
Match: GAX94049.1 (NADH dehydrogenase [Pythium insidiosum]) HSP 1 Score: 79.0 bits (193), Expect = 2.000e-11 Identity = 40/85 (47.06%), Postives = 61/85 (71.76%), Query Frame = 0 Query: 79 FDTYKVAESLQEAGFSKGQAEAILRVVVAGMEESTLKSTAMIATRRDLLDLKTELSEKLFSSTMRFDVAQRHSKEVIEKDLMSVR 164 FDT+ V LQE GFS QAEAIL V+ M ES ++AT+ + ++LK ELSE++F+ST++FD+AQRH +E++E+D +++ Sbjct: 410 FDTHHVVRRLQEHGFSPEQAEAILEVMKDSMAESLDAQARVLATKSEHVELKAELSERVFNSTLKFDIAQRHMRELLERDFNNLK 494
BLAST of NO28G01510 vs. NCBI_GenBank
Match: CCA23607.1 (conserved hypothetical protein [Albugo laibachii Nc14] >CCA24158.1 conserved hypothetical protein [Albugo laibachii Nc14]) HSP 1 Score: 78.6 bits (192), Expect = 2.700e-11 Identity = 37/89 (41.57%), Postives = 63/89 (70.79%), Query Frame = 0 Query: 75 AVVSFDTYKVAESLQEAGFSKGQAEAILRVVVAGMEESTLKSTAMIATRRDLLDLKTELSEKLFSSTMRFDVAQRHSKEVIEKDLMSVR 164 A ++FDT++V + LQE GF QAE IL V+ M +S ++AT+ + + L+ ELSE++F+ST++FD+AQRH +E++E+D +++ Sbjct: 127 AALTFDTHRVVKRLQEEGFPPSQAEGILEVIKDSMSDSLEMQARILATKAEHVQLRAELSERVFNSTLKFDIAQRHMRELLERDFNNLK 215
BLAST of NO28G01510 vs. NCBI_GenBank
Match: CCI49709.1 (unnamed protein product [Albugo candida]) HSP 1 Score: 77.8 bits (190), Expect = 4.600e-11 Identity = 37/89 (41.57%), Postives = 63/89 (70.79%), Query Frame = 0 Query: 75 AVVSFDTYKVAESLQEAGFSKGQAEAILRVVVAGMEESTLKSTAMIATRRDLLDLKTELSEKLFSSTMRFDVAQRHSKEVIEKDLMSVR 164 A ++FDT++V + LQE GF QAE IL V+ M +S ++AT+ + + L+ ELSE++F+ST++FD+AQRH +E++E+D +++ Sbjct: 5 AALTFDTHRVVKRLQEEGFPPRQAEGILEVIKDSMSDSLEMQARILATKAEHVQLRAELSERVFNSTLKFDIAQRHMRELLERDFNNLK 93 The following BLAST results are available for this feature:
BLAST of NO28G01510 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO28G01510 ID=NO28G01510|Name=NO28G01510|organism=Nannochloropsis oceanica|type=gene|length=1790bpback to top protein sequence of NO28G01510.2 >NO28G01510.2-protein ID=NO28G01510.2-protein|Name=NO28G01510.2|organism=Nannochloropsis oceanica|type=polypeptide|length=214bpback to top protein sequence of NO28G01510.1 >NO28G01510.1-protein ID=NO28G01510.1-protein|Name=NO28G01510.1|organism=Nannochloropsis oceanica|type=polypeptide|length=241bpback to top Synonyms
Publications
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