NO28G01500, NO28G01500 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO28G01500 vs. NCBI_GenBank
Match: BAJ93048.1 (predicted protein [Hordeum vulgare subsp. vulgare]) HSP 1 Score: 72.4 bits (176), Expect = 3.400e-9 Identity = 45/139 (32.37%), Postives = 77/139 (55.40%), Query Frame = 0 Query: 128 LKKIPIFPLNIVGTPGATRQLRVFEPRYRQLFQDIFNDKMGHNRTFGLVFTEGKGPAKVGCLMQVEMLQYENQRADRFMTWNLAVERFAIRSLNTQDQPYVVATAETGYEDLPLVQRLVP--ECDALEGKIEALVREIL 265 L ++P+FPL +V P AT L +FE RYR + + + + FG+VF G + VGC+ E++++E DRF ERF + + +++PY+VA + ED P + P + +AL ++EAL+R+++ Sbjct: 71 LVELPLFPLPLVLFPDATHALHIFEFRYRIMMHTVLDTDL----RFGIVFAGSDGASDVGCV--GEVVKHERLADDRFFLICKGQERFRVARI-VRNKPYLVAAVQ-WLEDRPPAETPAPGEDAEALAVEVEALMRDVI 201
BLAST of NO28G01500 vs. NCBI_GenBank
Match: XP_020152741.1 (uncharacterized protein LOC109738045 [Aegilops tauschii subsp. tauschii]) HSP 1 Score: 72.0 bits (175), Expect = 4.400e-9 Identity = 45/139 (32.37%), Postives = 77/139 (55.40%), Query Frame = 0 Query: 128 LKKIPIFPLNIVGTPGATRQLRVFEPRYRQLFQDIFNDKMGHNRTFGLVFTEGKGPAKVGCLMQVEMLQYENQRADRFMTWNLAVERFAIRSLNTQDQPYVVATAETGYEDLPLVQRLVP--ECDALEGKIEALVREIL 265 L ++P+FPL +V P AT L +FE RYR + + + + FG+VF G + VGC+ E++++E DRF ERF + + +++PY+VA + ED P + P + +AL ++EAL+R+++ Sbjct: 71 LVELPLFPLPLVLFPDATHALHIFEFRYRIMMHTVLDTDL----RFGVVFAGSDGASDVGCV--GEVVKHERLADDRFFLICKGQERFRVARI-VRNKPYLVAAVQ-WLEDRPPAETPAPGEDAEALAVEVEALMRDVI 201
BLAST of NO28G01500 vs. NCBI_GenBank
Match: XP_003563043.2 (uncharacterized protein LOC100828571 [Brachypodium distachyon]) HSP 1 Score: 70.9 bits (172), Expect = 9.800e-9 Identity = 45/139 (32.37%), Postives = 76/139 (54.68%), Query Frame = 0 Query: 128 LKKIPIFPLNIVGTPGATRQLRVFEPRYRQLFQDIFNDKMGHNRTFGLVFTEGKGPAKVGCLMQVEMLQYENQRADRFMTWNLAVERFAIRSLNTQDQPYVVATAETGYEDLPLVQRLVP--ECDALEGKIEALVREIL 265 L ++P+FPL +V P AT L +FE RYR + + + FG+VF G + VGC+ E++++E DRF ERF + + +++PY+VA + ED P + P + +AL ++EAL+R+++ Sbjct: 112 LVELPLFPLPLVLFPDATHALHIFEFRYRIMMHTVLQTDL----RFGVVFAGSGGASDVGCV--GEVVKHERLADDRFFLICKGQERFRVARV-VRNKPYLVAAVQ-WLEDRPPAEAPAPGEDAEALAVEVEALMRDVI 242
BLAST of NO28G01500 vs. NCBI_GenBank
Match: KQK16066.1 (hypothetical protein BRADI_1g26540v3 [Brachypodium distachyon]) HSP 1 Score: 70.9 bits (172), Expect = 9.800e-9 Identity = 45/139 (32.37%), Postives = 76/139 (54.68%), Query Frame = 0 Query: 128 LKKIPIFPLNIVGTPGATRQLRVFEPRYRQLFQDIFNDKMGHNRTFGLVFTEGKGPAKVGCLMQVEMLQYENQRADRFMTWNLAVERFAIRSLNTQDQPYVVATAETGYEDLPLVQRLVP--ECDALEGKIEALVREIL 265 L ++P+FPL +V P AT L +FE RYR + + + FG+VF G + VGC+ E++++E DRF ERF + + +++PY+VA + ED P + P + +AL ++EAL+R+++ Sbjct: 73 LVELPLFPLPLVLFPDATHALHIFEFRYRIMMHTVLQTDL----RFGVVFAGSGGASDVGCV--GEVVKHERLADDRFFLICKGQERFRVARV-VRNKPYLVAAVQ-WLEDRPPAEAPAPGEDAEALAVEVEALMRDVI 203
BLAST of NO28G01500 vs. NCBI_GenBank
Match: XP_013711358.1 (uncharacterized protein LOC106415251 [Brassica napus] >CDY39354.1 BnaC05g15330D [Brassica napus]) HSP 1 Score: 69.7 bits (169), Expect = 2.200e-8 Identity = 47/152 (30.92%), Postives = 80/152 (52.63%), Query Frame = 0 Query: 127 ELKKIPIFPLNIVGTPGATRQLRVFEPRYRQLFQDIFNDKMGHNRTFGLVFTEGKGPAKVGCLMQVEMLQYENQRADRFMTWNLAVERFAIRSLNTQDQPYVVATAETGYEDLPLVQRLVPECDALEGKIEALVREILAYCIRWECKALEQE 279 +L ++P+FPL +V PGAT L++FE RYR + Q + + FG+V+++ + G E++++E DRF ERF + L + +PY+VA T ED P + + E L ++E L++E++ R KA ++E Sbjct: 71 DLVELPLFPLPLVLFPGATIPLQIFEYRYRVMMQTLLQSDL----RFGVVYSDAVSGSAAGVGCVGEIIKHERLVDDRFFLICKGQERFRVSDL-VRTKPYLVAKV-TWLEDRPSGEENLEE---LANEVEVLMKEVIRLSNRLNGKAEKEE 213
BLAST of NO28G01500 vs. NCBI_GenBank
Match: XP_013587194.1 (PREDICTED: lon protease [Brassica oleracea var. oleracea]) HSP 1 Score: 69.7 bits (169), Expect = 2.200e-8 Identity = 47/152 (30.92%), Postives = 80/152 (52.63%), Query Frame = 0 Query: 127 ELKKIPIFPLNIVGTPGATRQLRVFEPRYRQLFQDIFNDKMGHNRTFGLVFTEGKGPAKVGCLMQVEMLQYENQRADRFMTWNLAVERFAIRSLNTQDQPYVVATAETGYEDLPLVQRLVPECDALEGKIEALVREILAYCIRWECKALEQE 279 +L ++P+FPL +V PGAT L++FE RYR + Q + + FG+V+++ + G E++++E DRF ERF + L + +PY+VA T ED P + + E L ++E L++E++ R KA ++E Sbjct: 71 DLVELPLFPLPLVLFPGATIPLQIFEYRYRVMMQTLLQSDL----RFGVVYSDAVSGSAAGVGCVGEIIKHERLVDDRFFLICKGQERFRVTDL-VRTKPYLVAKV-TWLEDRPSGEENLEE---LANEVEVLMKEVIRLSNRLNGKAEKEE 213
BLAST of NO28G01500 vs. NCBI_GenBank
Match: OLB19176.1 (hypothetical protein AUH16_07860 [Acidobacteria bacterium 13_2_20CM_57_7]) HSP 1 Score: 69.7 bits (169), Expect = 2.200e-8 Identity = 33/77 (42.86%), Postives = 49/77 (63.64%), Query Frame = 0 Query: 129 KKIPIFPLNIVGTPGATRQLRVFEPRYRQLFQDIFNDKMGHNRTFGLVFTEGKGPAKVGCLMQVEML--QYENQRAD 204 ++IP+FPLN+V PGA L +FEPRYRQ+ +D +K FG++ + KG A+VGC ++ + +YEN R D Sbjct: 4 ERIPLFPLNVVLLPGAELPLHIFEPRYRQMVKDCLEEK----SEFGMILSLDKGVARVGCTAEIMQVTKRYENGRMD 76
BLAST of NO28G01500 vs. NCBI_GenBank
Match: OLB84060.1 (hypothetical protein AUI12_14835 [Acidobacteria bacterium 13_2_20CM_2_57_6]) HSP 1 Score: 69.7 bits (169), Expect = 2.200e-8 Identity = 33/77 (42.86%), Postives = 49/77 (63.64%), Query Frame = 0 Query: 129 KKIPIFPLNIVGTPGATRQLRVFEPRYRQLFQDIFNDKMGHNRTFGLVFTEGKGPAKVGCLMQVEML--QYENQRAD 204 ++IP+FPLN+V PGA L +FEPRYRQ+ +D +K FG++ + KG A+VGC ++ + +YEN R D Sbjct: 4 ERIPLFPLNVVLLPGAELPLHIFEPRYRQMVKDCLEEK----SEFGMILSLDKGVARVGCTAEIMQVTKRYENGRMD 76
BLAST of NO28G01500 vs. NCBI_GenBank
Match: XP_018466265.1 (PREDICTED: uncharacterized protein LOC108837742 [Raphanus sativus]) HSP 1 Score: 69.3 bits (168), Expect = 2.800e-8 Identity = 49/152 (32.24%), Postives = 80/152 (52.63%), Query Frame = 0 Query: 125 QKELKKIPIFPLNIVGTPGATRQLRVFEPRYRQLFQDIFNDKMGHNRTFGLVFTE--GKGPAKVGCLMQVEMLQYENQRADRFMTWNLAVERFAIRSLNTQDQPYVVATAETGYEDLPLVQRLVPECDALEGKIEALVREILAYCIRWECKA 275 Q ++ +P+FPL +V PGA L++FE RYR + + + FG+V+++ A+VGC+ E++++E DRF ERF + SL + +PY+V T ED P + DAL G++E L++E++ R KA Sbjct: 65 QDDVVHLPLFPLPLVLFPGAILPLQIFEFRYRIMMHTLLESDL----RFGVVYSDAVSGSAAEVGCV--GEVVKHERLVDDRFFLICKGQERFRVTSL-VRTKPYLVGEV-TWLEDRPSGEE---NLDALAGEVEVLMKEVIRLSNRLNGKA 205
BLAST of NO28G01500 vs. NCBI_GenBank
Match: PIN21689.1 (Endopeptidase La [Handroanthus impetiginosus]) HSP 1 Score: 68.9 bits (167), Expect = 3.700e-8 Identity = 50/178 (28.09%), Postives = 91/178 (51.12%), Query Frame = 0 Query: 88 YDPSSYISIMKNQPVEWFDNTMSYGVFNWGLSSTGDMQKELKKIPIFPLNIVGTPGATRQLRVFEPRYRQLFQDIFNDKMGHNRTFGLVFTEGK-GPAKVGCLMQVEMLQYENQRADRFMTWNLAVERFAIRSLNTQDQPYVVATAETGYEDLPLVQRLVPECDALEGKIEALVREIL 265 + PS + + +P + + S+ + S D ++ ++P+FPL +V PGA L++FE RYR + + + FG+++T+ G A VGC+ E++++E DRF ERF + L + +PY+VA T ED P + V + DAL ++E +++++ Sbjct: 38 FTPSHHCRLRLRKPNSFSCSASSFSEKHHTNSPNSD---DVVELPLFPLPLVLFPGAILPLQIFEFRYRMMMHTLLQTDL----RFGVIYTDAAIGTADVGCV--GEVIKHERLVDDRFFLICKGQERFRVTKL-VRTKPYLVAEV-TWLEDRPSGE--VEDLDALAKEVEMYMKDVI 202 The following BLAST results are available for this feature:
BLAST of NO28G01500 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO28G01500 ID=NO28G01500|Name=NO28G01500|organism=Nannochloropsis oceanica|type=gene|length=5159bpback to top protein sequence of NO28G01500.1 >NO28G01500.1-protein ID=NO28G01500.1-protein|Name=NO28G01500.1|organism=Nannochloropsis oceanica|type=polypeptide|length=376bpback to top Synonyms
Publications
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