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Properties
| Property Name | Value |
|---|
| Description | Unknown protein |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| chr28 | genome | chr28:435015..438452 + |
Analyses
This gene is derived from or has results from the following analyses
Homology
BLAST of NO28G01390 vs. NCBI_GenBank
Match: EWM20845.1 (hypothetical protein Naga_100496g1 [Nannochloropsis gaditana]) HSP 1 Score: 107.8 bits (268), Expect = 1.800e-19 Identity = 126/363 (34.71%), Postives = 155/363 (42.70%), Query Frame = 0
Query: 94 SLNPFDEEEGRGKDFVHAPQIKISQALLRKQESCAPV-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRQNDFASTTSPRPCHDEH-LPITQMPERGRSTINGNNANNSTRTSSISPLPLRRQSYLSLSPPSSSPVAGRSPSTPNGDYREDEEGA--RGEGRG---------------NSPSSTS----GIRGSRRISFRFQTA--------SPXXXXXXXXXXPLLAEPEKRRGGAEAAPATAVPAAVELQPDFLKSYDARKIGFQIAKNYVRLYTPQERERLDEAYEGLLKKHGRDPVVQWLHQEIVLDVLESSSTPYLTILL--NGFCPPILRRFLLYLLFPFGYLFSLCCCLPRSLRPS 424
SLNPFD+E + P +I LLRKQ SCAPV RQN +P P T + GRS + R P + + L P S + +GA G G+G +SPSS S I RRISFRFQ A XXXXXXXXXX P+ + A + PA A+ L P LKSYDAR+IGF+IA+NYVRLYT ER+ L+E YEGLLK HGRDPVV WLH+E++ + SS P + LL + PP LL FP +L S CL P+
Sbjct: 92 SLNPFDDER---NEIQAMPHYRIDPDLLRKQTSCAPVRLLEVHSGDAHGSEDLPRLSSGVPNPYVRYPRQNTARGIMAPSALPSSRTYPTTPLASLGRSQAGEGYTGPTPRPCHEEAHPSHQDNRSPLGLPLEGNERMCSGDDAASRHLSRAQGAVPTGSGQGLAPLPSTRPPSTAIASSPSSPSLSYPTILTGRRISFRFQPAXXXXXXXXXXXXXXXXXXXXXXXPTPDLTQQPA-SIPAMKCSASSALNPALLKSYDARQIGFEIARNYVRLYTQAERDVLNEQYEGLLKCHGRDPVVAWLHKEVMWPMRPPSSFPAESSLLLASPPSPPFPALTLLSSRFPSSFLRSSSTCLSPPTHPT 450
The following BLAST results are available for this feature:
Relationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO28G01390 ID=NO28G01390|Name=NO28G01390|organism=Nannochloropsis oceanica|type=gene|length=3438bp
CAAACGCAGGCAAACCAATGCCAACCGATCCCCCGAAATCGCTATCGCCT
CCTCGCAAGGCTCCTCGTCCTCATCCGCCACCATCGACACCACCACCACG
ACCTCATTACATCAGCAGCCTCCATCCTCCTCCTCCTCCTCTTCCTCTTC
CTTCTCCTCATCCTCCTCCTTCTTCCGCTTCTTTTTTGCCACCATTAACA
CCACCATTACCATCCAGAGCCATCAACCAGCACCAAAAGCAAAAGCCACT
TCATCCTCCCACACCACAAAACATTGTCGCAGCTGCAGCGGTAGGGAGCC
TGAATCCTTTCGATGAGGAAGAAGGTAGAGGGAAAGACTTTGTCCATGCC
CCGCAAATTAAAATCAGTCAGGCGCTTCTCCGCAAGCAGGAATCGTGCGC
ACCCGTGGTCTTGATCGAGGTAGGAGGTGGAGGGGGAGGAGTCAGGCACG
TAGCCACTTCTCCAAGCAAGCGTTACCAGCACTATTTACAGCAGCAGCGG
CAGAACGACTTTGCTTCCACTACATCGCCCCGTCCTTGTCACGATGAACA
CCTTCCAATAACTCAGATGCCGGAGCGAGGGCGGTCCACCATCAACGGCA
ACAATGCGAACAACAGCACCCGCACCAGCAGCATCTCTCCCTTGCCTCTT
CGCCGTCAATCGTATCTTTCGCTTTCTCCTCCATCATCTTCACCCGTTGC
TGGTCGGTCTCCTTCCACACCAAATGGAGACTATCGAGAAGACGAGGAGG
GTGCGAGGGGGGAAGGGAGGGGAAATAGCCCGTCTTCCACTTCTGGCATA
CGCGGTAGCCGTCGAATCTCCTTCCGCTTTCAGACAGCCTCCCCCTCTCC
TGGCCCTTCTTCCTCCCCCCCCTCCCCTTTGTTAGCAGAACCAGAAAAAA
GAAGAGGCGGCGCAGAAGCGGCACCAGCAACAGCAGTACCAGCAGCGGTA
GAGCTTCAGCCTGACTTTCTCAAATCTTACGATGCGAGGAAAATAGGGTT
TCAGATAGCAAAGAATTACGTGCGTTTATACACACCCCAAGAAAGAGAGC
GCCTGGACGAGGCCTACGAAGGTCTGTTGAAGAAACACGGACGCGACCCA
GTGGTCCAGTGGTTGCATCAAGAGgtaagcaggcacgccctcattccctc
cctccctccctccctccgtccctctttcttccctcgcctttttttctatc
gtaacagctacctggcaccttctctccctccctttcttcccccctccagA
TTGTCCTAGATGTGCTTGAGTCCTCTTCCACTCCCTACCTGACTATCCTC
CTGAACGGCTTCTGCCCCCCGATCCTCCGTCGCTTCCTCCTTTACCTCCT
CTTCCCCTTTGGCTACCTTTTCTCCCTCTGTTGCTGCCTCCCCCGCTCCC
TCCGTCCCTCTTTCTCCTCACTCCGACGGAACCTGACTCCTTCGTATTGG
CAAGCCAACCTGGACGACGAGATTACGTTCTACACCTTTCAGTTCATTGC
ACTTTCCTTCTTCCCCCTCCTTCCTTCCCTCCTCTCCGCTTCCCTGGCCA
TCCTGTCTTCCCGCTCCTGGACCCTGGTGCCCCAAGCCTGCTCGTCCTCC
CTCCCTTCCTCCTTCTCCAACTTCAACTCTGCCTGTCCGTTGGATTTTTA
TGCCGACATGGGAGGGAGGGAGGAAGGAAGGGAGGACGGGCTGGTGAGTC
ATGTCTTTATGCAGGGGAATGCCAGGGATAGCAAGACAGGATGGTACTAC
ACTAATCCGGTGAGGGTGGACTCGGCAATGGGGGGGCGCTGCAGCGTGAG
CGAGACTGTAGAAGGGCTCCCGACCATGCCGCAGgtaagaaccaagcata
aaatgggagttgcatgtgtttgtcgtacgtgcccctctgaagtttcacat
agataaactggatctgataacggccaggaacgtaaacagccgttaagatg
taacgctggcgcttgatgtcaagccccaggcggctacttcatttaccatt
aactcagattaacacctgcatatgagtagactcactgaaaaagcatatat
tgacacacatgcacacatacttgaacaaaacaatccaccaacagATCGGC
GTCCTTCTCATTTACATTGCCTTCATCACATGGGCCCTCCGGGAGCTGGT
CCAAAAAGTGCGCGAACTAAAGTACATGAAAATTGCCAATCACCTCAAAG
CCGTCTACGTCCCCAACATGGTAATCAAGCATGCCTCTAGGCAACAGCGA
AAAAAAAAGAAGGCGAAAGAACAGAAGAAGAAGCAGCACAACACGAAGAA
ACAGCGGCAGCAGCAGCAGCAGCAGCAGCAGCAGGAGAATAAGACCGGTA
GACGAAAAAGTCTTGGAGGGATGGGAGTGGCACCTGCGGCTGCTGACGGA
GGAGGGACGGAGGAGGGAGGGGGAGAACGGGGAGGAATTCCGGCGGATGC
TAACGGCCATGCCCGTTTCTGGGCCCTTTTCCGTTACCATAGCAGCAGCA
CTTTCGAATGGGAAGATGGTAGGGAGATAGAAGAGCAGGAGGACGAGGAG
AAGGGGGAAGACCTCCCTTCCTCCACCGCGCCTGCTTCTTATCCCACTCG
CCGATTCCCCTATTATTTCCTCTTTCTCGAGACGTCCCTCCTCTTCTACT
GTCTATATCTCCTTCTCAAAGGAGGGAACAGCGACCTAACCTGCTACATC
ATCCCCGGCACCGACTCTCCTTTCTCTCCCTCTCTCGCTTTGTGGGCCCA
AGCCACCTACGACCGACTCCTTCAAACTTCCTCCTCCTCTCGTCGCTCCG
CCACGCAAATGTGCTTCGCCTACTGGCCCTGTCCCTTACCAACCACCAGT
CACTCCAACCCTCCCTTCCATGCGCCTTTCCTCCTTCGATACCGACAAGC
AAAGGCGAGGACCCTCCTGGACGTTATCATGGAAACGGGCATCTTTGCCT
CAACGGCTTATGCACTCACGCGGCTGTTGCAGAAAAGCTATTTTTTCATC
GACATTGAGAGGTATATGGATCCGGCGTTCGAGCCTCCATATAAAAATAT
CCATGAGCACAGgtactttctatacttcagtgatcatttgagtgtttatt
ttccggcaaccatttttcttttatagttggtgttatgcaacgttggctta
gtgggcggaaggaggaaattattatcttatcaattttgacgtatgtgatg
aaaaaggactgtatgatatacaacaaccagtcgtcgtcgacttcctttcc
ctccccttcttcccttatcgtcccctctttccctttgtcttttcctcctt
cccgacagGTGCCGTGTCATGACCAGGGGGATGGTGGAAGACTACATCTA
CCTGCGACGAGAGATGTTCATCGACGTGTGCGTCCAACGAGGAGTGGAGG
GAAGAGAGAGCGAGATGGGAGGGAGAGGAGGAAGGTGA back to topprotein sequence of NO28G01390.1 >NO28G01390.1-protein ID=NO28G01390.1-protein|Name=NO28G01390.1|organism=Nannochloropsis oceanica|type=polypeptide|length=930bp
MPTDPPKSLSPPRKAPRPHPPPSTPPPRPHYISSLHPPPPPLPLPSPHPP
PSSASFLPPLTPPLPSRAINQHQKQKPLHPPTPQNIVAAAAVGSLNPFDE
EEGRGKDFVHAPQIKISQALLRKQESCAPVVLIEVGGGGGGVRHVATSPS
KRYQHYLQQQRQNDFASTTSPRPCHDEHLPITQMPERGRSTINGNNANNS
TRTSSISPLPLRRQSYLSLSPPSSSPVAGRSPSTPNGDYREDEEGARGEG
RGNSPSSTSGIRGSRRISFRFQTASPSPGPSSSPPSPLLAEPEKRRGGAE
AAPATAVPAAVELQPDFLKSYDARKIGFQIAKNYVRLYTPQERERLDEAY
EGLLKKHGRDPVVQWLHQEIVLDVLESSSTPYLTILLNGFCPPILRRFLL
YLLFPFGYLFSLCCCLPRSLRPSFSSLRRNLTPSYWQANLDDEITFYTFQ
FIALSFFPLLPSLLSASLAILSSRSWTLVPQACSSSLPSSFSNFNSACPL
DFYADMGGREEGREDGLVSHVFMQGNARDSKTGWYYTNPVRVDSAMGGRC
SVSETVEGLPTMPQIGVLLIYIAFITWALRELVQKVRELKYMKIANHLKA
VYVPNMVIKHASRQQRKKKKAKEQKKKQHNTKKQRQQQQQQQQQENKTGR
RKSLGGMGVAPAAADGGGTEEGGGERGGIPADANGHARFWALFRYHSSST
FEWEDGREIEEQEDEEKGEDLPSSTAPASYPTRRFPYYFLFLETSLLFYC
LYLLLKGGNSDLTCYIIPGTDSPFSPSLALWAQATYDRLLQTSSSSRRSA
TQMCFAYWPCPLPTTSHSNPPFHAPFLLRYRQAKARTLLDVIMETGIFAS
TAYALTRLLQKSYFFIDIERYMDPAFEPPYKNIHEHRCRVMTRGMVEDYI
YLRREMFIDVCVQRGVEGRESEMGGRGGR* back to top
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