NO28G01350, NO28G01350 (gene) Nannochloropsis oceanica

Overview
NameNO28G01350
Unique NameNO28G01350
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length5328
Alignment locationchr28:425104..430431 -

Link to JBrowse

Properties
Property NameValue
DescriptionHistone deacetylase domain protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr28genomechr28:425104..430431 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0005515protein binding
GO:0003677DNA binding
Vocabulary: INTERPRO
TermDefinition
IPR009057Homeodomain-like
IPR036770Ankyrin_rpt-contain_sf
IPR023696Ureohydrolase_domain
IPR017930Myb_dom
IPR000286His_deacetylse
IPR020683Ankyrin_rpt-contain_dom
IPR023801His_deacetylse_dom
IPR002110Ankyrin_rpt
IPR001005SANT/Myb
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Homology
[Close]
BLAST of NO28G01350 vs. NCBI_GenBank
Match: EWM20081.1 (SANT/Myb domain protein [Nannochloropsis gaditana])

HSP 1 Score: 138.7 bits (348), Expect = 1.600e-28
Identity = 79/125 (63.20%), Postives = 88/125 (70.40%), Query Frame = 0 
Query:  220 MAAQVQHIAKMKAKQLG--------LLEDGEXXXXXXXXXXXXXKQRGAAGWLCARGAENTGRWRRQEHDRFVGGLKKWGKEWKKVAGEVRTRTVVQTRTHAQKYFQKLQKQMAMGVSLEEAVEA 337
            MAAQVQHIA+ KA+QLG        L++  E           XX    +   +CA GAE+TGRW R EHDRFV GLKKWGKEWK+VAGEV TRTVVQTRTHAQKYFQKLQK MA G SLE+AVEA
Sbjct:    1 MAAQVQHIARKKARQLGYPDEDGPALVQAWEGHSPPSLGPSPXXXXXXSLAPVCAPGAEHTGRWSRLEHDRFVDGLKKWGKEWKRVAGEVGTRTVVQTRTHAQKYFQKLQKHMANGASLEDAVEA 125
[Close]
BLAST of NO28G01350 vs. NCBI_GenBank
Match: CBN78959.1 (histone deactylase of possible bacterial origin with ankyrin repeats at the N-terminus [Ectocarpus siliculosus])

HSP 1 Score: 91.3 bits (225), Expect = 3.000e-14
Identity = 47/70 (67.14%), Postives = 54/70 (77.14%), Query Frame = 0 
Query:  264 LCARGAENTGRWRRQEHDRFVGGLKKWGKEWKKVAGEVRTRTVVQTRTHAQKYFQKLQKQMA-MGVSLEE 333
            LC  G E TGRW + EH+ F+  LKK+GKEWK+VA  VRTRTVVQTRTHAQKYFQKL K  A  G+SLE+
Sbjct:  740 LCLPGTEQTGRWTKAEHELFLRALKKYGKEWKRVACMVRTRTVVQTRTHAQKYFQKLTKAAAGGGISLED 809
[Close]
BLAST of NO28G01350 vs. NCBI_GenBank
Match: GAX25258.1 (hypothetical protein FisN_5Lh340 [Fistulifera solaris])

HSP 1 Score: 88.6 bits (218), Expect = 1.900e-13
Identity = 42/64 (65.62%), Postives = 49/64 (76.56%), Query Frame = 0 
Query:  259 GAAGWLCARGAENTGRWRRQEHDRFVGGLKKWGKEWKKVAGEVRTRTVVQTRTHAQKYFQKLQK 323
            G  G +   G E+TGRW + EH+ F+ GLK +GKEWKKVA  V+TRTVVQTRTHAQKYFQKL K
Sbjct:  105 GTPGKVVETGKEHTGRWTKAEHEAFLAGLKMYGKEWKKVAARVKTRTVVQTRTHAQKYFQKLHK 168
[Close]
BLAST of NO28G01350 vs. NCBI_GenBank
Match: GAX16962.1 (hypothetical protein FisN_5Hh340 [Fistulifera solaris])

HSP 1 Score: 88.6 bits (218), Expect = 1.900e-13
Identity = 42/64 (65.62%), Postives = 49/64 (76.56%), Query Frame = 0 
Query:  259 GAAGWLCARGAENTGRWRRQEHDRFVGGLKKWGKEWKKVAGEVRTRTVVQTRTHAQKYFQKLQK 323
            G  G +   G E+TGRW + EH+ F+ GLK +GKEWKKVA  V+TRTVVQTRTHAQKYFQKL K
Sbjct:  108 GTPGKVVETGKEHTGRWTKAEHEAFLAGLKMYGKEWKKVAARVKTRTVVQTRTHAQKYFQKLHK 171
[Close]
BLAST of NO28G01350 vs. NCBI_GenBank
Match: XP_002179586.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC48572.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 85.1 bits (209), Expect = 2.100e-12
Identity = 39/55 (70.91%), Postives = 47/55 (85.45%), Query Frame = 0 
Query:  268 GAENTGRWRRQEHDRFVGGLKKWGKEWKKVAGEVRTRTVVQTRTHAQKYFQKLQK 323
            G E+TGRW + EH+ F+  L+ +GKEWKKVA +V+TRTVVQTRTHAQKYFQKLQK
Sbjct:  107 GQEHTGRWTKAEHEAFLSALQTYGKEWKKVAAKVKTRTVVQTRTHAQKYFQKLQK 161
[Close]
BLAST of NO28G01350 vs. NCBI_GenBank
Match: OEU18505.1 (hypothetical protein FRACYDRAFT_155665, partial [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 81.6 bits (200), Expect = 2.400e-11
Identity = 37/49 (75.51%), Postives = 43/49 (87.76%), Query Frame = 0 
Query:  274 RWRRQEHDRFVGGLKKWGKEWKKVAGEVRTRTVVQTRTHAQKYFQKLQK 323
            RW ++EHD F+ GLK +GKEWKKVA +V+TRTVVQTRTHAQKYFQKL K
Sbjct:    1 RWTKEEHDAFLSGLKMYGKEWKKVAAKVKTRTVVQTRTHAQKYFQKLSK 49
[Close]
BLAST of NO28G01350 vs. NCBI_GenBank
Match: CBN78551.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 79.0 bits (193), Expect = 1.500e-10
Identity = 39/66 (59.09%), Postives = 46/66 (69.70%), Query Frame = 0 
Query:  264 LCARGAENTGRWRRQEHDRFVGGLKKWGKEWKKVAGEVRTRTVVQTRTHAQKYFQKLQKQMAMGVS 330
            +C  G ENTGRW   EH  F+ GL+  GK WK++A  ++TRTVVQ RTHAQKYFQKL K  A G S
Sbjct:   23 VCQPGNENTGRWTSDEHRLFLRGLELHGKGWKQIATLIQTRTVVQIRTHAQKYFQKLSKAQASGTS 88
[Close]
BLAST of NO28G01350 vs. NCBI_GenBank
Match: XP_002291033.1 (MYB DNA binding protein/ transcription factor-like protein, partial [Thalassiosira pseudonana CCMP1335] >EED91140.1 MYB DNA binding protein/ transcription factor-like protein, partial [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 77.4 bits (189), Expect = 4.500e-10
Identity = 35/49 (71.43%), Postives = 42/49 (85.71%), Query Frame = 0 
Query:  274 RWRRQEHDRFVGGLKKWGKEWKKVAGEVRTRTVVQTRTHAQKYFQKLQK 323
            RW ++EH+ F+  L+ +GKEWKKVA  V+TRTVVQTRTHAQKYFQKLQK
Sbjct:    1 RWTKEEHEAFLSALQVYGKEWKKVAARVKTRTVVQTRTHAQKYFQKLQK 49
[Close]
BLAST of NO28G01350 vs. NCBI_GenBank
Match: EWM20846.1 (Histone deacetylase domain protein, partial [Nannochloropsis gaditana])

HSP 1 Score: 77.0 bits (188), Expect = 5.800e-10
Identity = 97/240 (40.42%), Postives = 117/240 (48.75%), Query Frame = 0 
Query: 1300 PPSL--------SVSERQAVGAVRLAVDQVCAGRKRNALCXXXXXXXXXXXXXXXLVGPAG-LPSSS---SSLSSLLNPVAAAVAHALDRYERVAVISLAHVHAQGTEECLQRVNGGKDSGGAGRGMASMLFSIFTEEGGAXXXXXXXXXXGSVHRVHVLPKKXXXXXXXXXXXXXXXXXXMVREEVLPELTKYSPQLILLSIDLETVSEDEGGRERWMGLTGKEVGELVRQVQRVADVC 1528
            PPSL          SE++ + ++ LA D + AGRKRNALC               LVGP G LP  S                     +RY+RVAV+SL    A+GTE+CL+ V  G+ + G        +FS+F E G     XXXXXXX            XXXXXXXXXXXXXXXX   V E  LP L  YSPQ + LS  LE V +   G     G  GKEVG + +QV R  D C
Sbjct:    3 PPSLXXXXXXXXXASEQRVLSSLYLATDHLLAGRKRNALCFVPSSSPTATSSSHHLVGPTGYLPPPSLXXXXXXXXXXXXXXXXXXXXERYDRVAVVSLHEKRAKGTEDCLRWVQQGRTTHG-----IIQVFSLFGEAG-----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRTVEEAFLPRLQAYSPQFMFLSWGLELVGKPGKGG----GWKGKEVGRVTQQVLRAMDAC 228
[Close]
BLAST of NO28G01350 vs. NCBI_GenBank
Match: GBG32437.1 (Myb family DNA-binding protein, SHAQKYF family [Aurantiochytrium sp. FCC1311])

HSP 1 Score: 77.0 bits (188), Expect = 5.800e-10
Identity = 35/53 (66.04%), Postives = 43/53 (81.13%), Query Frame = 0 
Query:  270 ENTGRWRRQEHDRFVGGLKKWGKEWKKVAGEVRTRTVVQTRTHAQKYFQKLQK 323
            ENTGRW ++EH +F+ GLK  GKEWKK++  + +RTVVQ RTHAQKYFQKL K
Sbjct:   49 ENTGRWTKEEHTKFLEGLKLHGKEWKKISNMIDSRTVVQIRTHAQKYFQKLAK 101
The following BLAST results are available for this feature:
BLAST of NO28G01350 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM20081.11.600e-2863.20SANT/Myb domain protein [Nannochloropsis gaditana][more]
CBN78959.13.000e-1467.14histone deactylase of possible bacterial origin wi... [more]
GAX25258.11.900e-1365.63hypothetical protein FisN_5Lh340 [Fistulifera sola... [more]
GAX16962.11.900e-1365.63hypothetical protein FisN_5Hh340 [Fistulifera sola... [more]
XP_002179586.12.100e-1270.91predicted protein [Phaeodactylum tricornutum CCAP ... [more]
OEU18505.12.400e-1175.51hypothetical protein FRACYDRAFT_155665, partial [F... [more]
CBN78551.11.500e-1059.09conserved unknown protein [Ectocarpus siliculosus][more]
XP_002291033.14.500e-1071.43MYB DNA binding protein/ transcription factor-like... [more]
EWM20846.15.800e-1040.42Histone deacetylase domain protein, partial [Nanno... [more]
GBG32437.15.800e-1066.04Myb family DNA-binding protein, SHAQKYF family [Au... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR065ncniR065Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR094ngnoR094Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO28G01350.1NO28G01350.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|314723gene_9866Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100496g6gene9568Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO28G01350.1NO28G01350.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO28G01350 ID=NO28G01350|Name=NO28G01350|organism=Nannochloropsis oceanica|type=gene|length=5328bp
ATGCACATGCAATCCCTTTCTCCCCCCGTCGACGACGGGGCGGGAATAGG
AGGAAGGATGGAAGGAGGAGGAGGAGTAGGGGGAGACTTCCCTTCTCACC
TGCAACCTCATCACCACCATATACTGGGGGAGGAGAAGCAGCAACCTTCC
CATCATTATTATCACCACCAGCAGCAGCAGCAGCAGCATCATCAGCAGCA
CCAGCACGTCGACGGCACTCCTTCCCTCCCCTTCGCTCCGGCCGGCTCAC
CAGACGACCTCCTTCCCATGGATCAACGCCACCTCACCCCCGTCCCTGCC
ATGCACATACCTCCTCCATCCCTCCTTTCCCCAGCTCCCGGCATCAACGG
CGCAGTTAGTTTCCCCCCGCCTCCTCCCCACCTGTTACGTGTCCTGCCTC
CTCCCCTTCCTCCTCCCCCCCCAGCCTCTACAACTAAAGGCCGCAGGAGG
AGCAGCAGTGGCGGTGGAGGAGGAGCAGCAGATGCTCACCACCAGCAGCA
TCAGCAGCAGCACCATTACTATCCTCACCAATATCCTGCTGCCACTACTG
CTGGTGCTCCTGGTGCTGCTGGTGCTGCTGCCTCCCTCCACAACAACAGC
AGCAGCAGCAACAGAATCAGCGGTAGCAGTAAGAGAGGCGTGCCTACACT
AGGACAAATGGCGGCGCAGGTGCAACATATTGCAAAGATGAAGGCCAAGC
AGTTGGGATTGCTGGAAGATGGGGAGGAGGGCGGGAGGGAGGGGGAGGAG
GAGGGGGAGGGCGAGAAACAGAGAGGGGCAGCAGGTTGGTTATGTGCACG
GGGGGCGGAGAACACGGGAAGGTGGAGAAGGCAGGAGCATGATCGTTTTG
TTGGAGGGTTGAAAAAGTGGGGGAAGGAATGGAAGAAGGTGGCCGGGGAG
GTCCGGACGAGGACAGTGGTGCAGACACGGACGCATGCGCAGAAGTATTT
TCAGAAGTTGCAGgtagggagggagggagggagggagggaaggaggggag
gagaggtgttcggtattgagagggcgggaaagaggagaaagagaataggg
aggaggaggaggaggtgatggtggtctatttttactctctctccccacac
acacccacaccttcacactttcaccccgccctccttccctcccttcctcc
tttcctcgtagAAACAAATGGCGATGGGCGTGAGCCTTGAGGAGGCTGTG
GAAGCCACCATGGAAGATAGCGATTATGAGGACGAAGGAGGAGAAGGAGG
AGGAGGAGGAGGAGGTGGGGTGGGGGAGAGGGAGGGGGAGGGAGTGGAAG
ACGAGGAGGAGGAGGAGGCGGAGAGGGAGGAGGAGGAGGAGGAGGAAGGA
AGAGAAGTAACTCTACCAGTAGTGGTGGAGGAGGAGGAGGGAGAGGAGGA
GGAAGGGCGAGGTCGGCTAGTACATCTTCTTCGAAAGGAGGAGGAGGAGG
AGGAGGAGGAGGAGGAGGAGGAGGAGGAGAGCCAGGGCCTGgtgaagaca
gagcactttcctcgaggggctaccccttccttcacgacgggtcactccct
ccttccctccctctccttccttcgcaccactctcaccaccaccagCAGCA
GCAGCATTCCTACACCTCTTCATCCCTCAATGGCCCCCCTCCTCATCACT
ACCCCCCCCATCCATCCCACGAAAAATACTCTCATGGCGGCGGCCTCCCT
CCTTCTCTTCCTTCCTCCCTCCCTTCCCACGATGCGGACGAATACCGCTC
GATTATGGCAGGGAGGAGGAAGAGGAAAGGGAGGAAGGGAAGGAGGGAGG
GGAGGAGCCAGGGGTACAACGACAGCACGGAAGAGGACGAGAGTGAGGAC
GGGAGCGAGGACGAGGAGGAGGAGGAGGAGGAGGAAGAAGCGTTGCTGAT
GTCAGACACGCGGGCAGCGGAGACGATGTGCGGGATTACTCAAAAAGGAG
CAAGTCCGTTACAGGGAGGGAGGGAAGGAGGGGTAGGAGGAGGGAGAGCG
AGCAGCGGTCCATACACAAATGGAAATGGAGGAAGGGGAGAACCCTGTTT
TCCTCCCCTCCCTCCTCCCTACGAGCAGCAGCAACAACAACAACAGCAAC
AGCAGCAGCAGCAGCAGCAGCAGGAGGAAGGAGAGGGAGGAGGGAGTGAG
GAAGGGAGGAAGGGAGGGAGGGAACGAGGAAGCAGCCTGTCGATCAGTAT
CCCTGGATGTAGCCCGGGAGCGCACTCCCTCTTCTGGGGACAGGAAGGGA
GGGAGGGAGGGAGGGAAGACGCGCCTACTACCATGGACGGACAGCAACCT
AACAACCACCCTACAGGGACAGGCATGTACCCTCCTTCCTTACGGCCCTC
CTCCCTCCTCTACCAGCAGCAGCAGCAGCAGCAGCACCAACAGCAGCAGC
ATCAGCTGTTCCTCCATCAACACCACGGACTGTCGCCCCTCCCTCCCTGC
CCTTCCCCCGCCGCCTGCGGCAAAAGGAAGTTTGCCGAGCTGGCCGTTGC
GGAAGCTCTCTCCGTCTGGGTTGGCGAGGGCAGCAGCAGCAGCAGCAGCA
GCAGCAGCCTCTCTGCCACTACCTTATCCTCAGGTCTACCTTCTTCCCTC
CCATCCTCCTACTCTCCTTCCCCCTTCTCGTCTGCGGCTGCGGCGGCAAC
TGCAGCGGCAGCAGCAGCAGCAGCAGCAGCCGGAGGAGTAGGAGTAGGAG
AATGTGTAACAGGAGAGAGTGCACTTGCTGCGGTTGATGCTGCTGTTGTT
GTTCCTCCCTCTTCCTCCCCTTCCATGCCCACCCCTACCACTAGTACTTT
CACAGTAAGAGGTGGCGGGCAGGGGGAGGGGGAGGGGGAGGGCGGGAGGG
AGGAAGTGGAGATGCTGGATGATGTCTCCAACGTATTCACTAAGGACGAC
GAAGAAGATGGGTTCGGGGGAGGGAGGGAGGGAGGCCTGCAGCAGCAGCA
GCAGCAGTACGACAAACACCTCGGTCAGCAGCAGCAGCAGCGGCAGCAGG
AGCAAGGGACAATGACGGAAAACGTTAATGCAGTTGCGCCAAGTGTCAAT
ATAAAGGGAGGGGACGGAGGGAGGAATGAAGGGGTCTCTCCCGCCTCCTC
CTCCACCTCCCCCTCCTCCTTCATCAAGCGCGAAGGCGAGGAAGGGACGT
TACTTGAAACATCAAACCCCCTTCAGCAGCAGCTTGCCTCCCTCATTCTG
GCCCAGGATTTGGAAGGAGTGACGAACGCCCTCAACCAGGCGCTCCAGCA
GCAACAGCAGCAACAGCAGCAGCAGCAGCTCGCCTCCCTCCCCCTCCCCC
CGCAGCACCCTCTTCCCCTCCCGAAATCCGCATCTGCTTCTCCTCCCCCT
CCCCCCTCCCTCCTCCACCTCCTCTCCTCCCCCCTCCCGGCACACGCCCA
CAAAACTCTCCTCATGCTGGCCGCCTCCTTGCCTTCCTCCCCGCCCTCCC
CCTCTCCTTCCCTCCCCCTCACCTTCTGCCAGCTCCTGCTCTCTTGCTCG
GCGTGTGCTCCCACGGCTGTGGATCGGAACGGGCGCTCTGCCCTTCACTA
CGCCGCCGAGGCTGGACACGCCCACGTGGTGCGTCTGCTCCTATTGCAGG
GAGGATGCGGTCCTTCCTCCTTGGACACGTCGCTGGAAACACCGTTGCAC
CTGGCCAGCAGGAAGGGTAGGAAGGAGTGTGTCCGTGCGCTCATCAGGCA
CGGCGCTGGGGCGTATATCCGAAACAAGGACGGGAAATCCGCTTTGGATG
TCGCGGGGGAAGACGAGGAGGAGGGGGAGGGAGCGAGATACAGAGGGTGG
AAAGCCAGGAGGGCAGACATTCGGAAGGTGATTTTCGAGGAGGAGCCGCG
GGTTCAAACACTCATCACCTGCCACTATTCCTCCTTTTCCTCGTCCTCGT
CCTCCTCCTCCACCAATCCAATCCCCTCCCTCCCTTTCTCTCCTCCCTCC
GCATCTCCTTCACGTCCCTCCCTCCTCTTCACCCGCCTGCAGAACGCCTC
CATCTTTCCTTCATTCCTCCTCCACCTCACGACACACGTGCCCCTCGTCC
CCTTCCTCCTCGAGGAAACTGACGAGGAAGGGGGGGAGGGCAGGAAGGAG
GGAGGGCGAGGCGCCTTGAGCAAGGTGCACACCCCCGCCTACCTCTCCTC
CCTCCATGCCCTCGATGCCCCTCCTACAAAGTCCCCTGATCCCTCCTCCC
CTCCCTCCCTCTCCGTCTCAGAACGGCAAGCCGTTGGCGCCGTCCGTTTG
GCCGTCGATCAGGTCTGTGCCGGGCGGAAACGAAACGCCCTCTGCCTCCT
TCCCCCTCCCCCCCCTCCCTCCCTCCCTCATTCCCATCACCTCGTCGGCC
CGGCTGGCCTGCCGTCCTCCTCGTCCTCCTTGTCCTCCCTCCTGAACCCA
GTGGCAGCGGCGGTGGCCCATGCCCTTGACCGTTACGAGCGAGTGGCCGT
TATTTCCCTCGCTCACGTCCACGCCCAAGGCACCGAGGAATGTCTCCAAA
GGGTGAATGGAGGAAAGGATAGTGGAGGGGCAGGAAGAGGAATGGCGTCG
ATGTTATTTTCCATCTTTACAGAAGAGGGGGGGGCCGAGGGAGGGAGGGA
GGGAGAGGAAGAGGGGGGGAGCGTGCATCGTGTCCACGTGCTTCCCAAGA
AGGCAACAGGCGAGGAAGGGAGGGAGGGAGGGGAAGAGGAGGGGGCCTTT
CGACGGATGGTGCGCGAAGAGGTGCTGCCGGAATTGACAAAGTATTCTCC
GCAATTAATTTTGTTGTCTATAGACTTGGAGACTGTGAGTGAGGACGAGG
GAGGGAGGGAGAGATGGATGGGGTTGACAGGAAAGGAGGTCGGGGAGTTA
GTGAGGCAAGTACAGAGAGTTGCGGATGTGTGCTCTGGAGGCAAGATGGT
GTGTGTGATGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGG
GAGAGGCAGTGGTGGCGCTTGTGAATGGGTTGATAGACCCTTATATGGAG
GAGGGAAAGGAAGAGGAGGAAGCGAAGGGGGAAGAAGCGAAGGAGAAAAC
GAAGAAGGGAGGAAAGGAAGAGGGGCTGGTCATGGACGCTGCCGACTGTT
ACAGCCGTGAGTGTAGGACGAGTCAGTGAGGGAGGGAAGGAGGGAGGGAG
GGAGGAGGGGATGGGAAGGAGTGGGAAAGAGTGAGGAGAGGAAGGAGAGA
AAGGAGGCGATTTTCCTTTTGATTTGGAAGGAAGGACGACGGCTCATGCG
TGTGTTTTTTTTTTCTATGTCTTCCTGCATATGGTGCCTGGTCATATCCC
TATTTTCTCTCGCCGTTATTTCTCCTTC
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protein sequence of NO28G01350.1

>NO28G01350.1-protein ID=NO28G01350.1-protein|Name=NO28G01350.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1609bp
MHMQSLSPPVDDGAGIGGRMEGGGGVGGDFPSHLQPHHHHILGEEKQQPS
HHYYHHQQQQQQHHQQHQHVDGTPSLPFAPAGSPDDLLPMDQRHLTPVPA
MHIPPPSLLSPAPGINGAVSFPPPPPHLLRVLPPPLPPPPPASTTKGRRR
SSSGGGGGAADAHHQQHQQQHHYYPHQYPAATTAGAPGAAGAAASLHNNS
SSSNRISGSSKRGVPTLGQMAAQVQHIAKMKAKQLGLLEDGEEGGREGEE
EGEGEKQRGAAGWLCARGAENTGRWRRQEHDRFVGGLKKWGKEWKKVAGE
VRTRTVVQTRTHAQKYFQKLQKQMAMGVSLEEAVEATMEDSDYEDEGGEG
GGGGGGGVGEREGEGVEDEEEEEAEREEEEEEEGREVTLPVVVEEEEGEE
EEGRGRLVHLLRKEEEEEEEEEEEEEESQGLQQQHSYTSSSLNGPPPHHY
PPHPSHEKYSHGGGLPPSLPSSLPSHDADEYRSIMAGRRKRKGRKGRREG
RSQGYNDSTEEDESEDGSEDEEEEEEEEEALLMSDTRAAETMCGITQKGA
SPLQGGREGGVGGGRASSGPYTNGNGGRGEPCFPPLPPPYEQQQQQQQQQ
QQQQQQQEEGEGGGSEEGRKGGRERGSSLSISIPGCSPGAHSLFWGQEGR
EGGREDAPTTMDGQQPNNHPTGTGMYPPSLRPSSLLYQQQQQQQHQQQQH
QLFLHQHHGLSPLPPCPSPAACGKRKFAELAVAEALSVWVGEGSSSSSSS
SSLSATTLSSGLPSSLPSSYSPSPFSSAAAAATAAAAAAAAAAGGVGVGE
CVTGESALAAVDAAVVVPPSSSPSMPTPTTSTFTVRGGGQGEGEGEGGRE
EVEMLDDVSNVFTKDDEEDGFGGGREGGLQQQQQQYDKHLGQQQQQRQQE
QGTMTENVNAVAPSVNIKGGDGGRNEGVSPASSSTSPSSFIKREGEEGTL
LETSNPLQQQLASLILAQDLEGVTNALNQALQQQQQQQQQQQLASLPLPP
QHPLPLPKSASASPPPPPSLLHLLSSPLPAHAHKTLLMLAASLPSSPPSP
SPSLPLTFCQLLLSCSACAPTAVDRNGRSALHYAAEAGHAHVVRLLLLQG
GCGPSSLDTSLETPLHLASRKGRKECVRALIRHGAGAYIRNKDGKSALDV
AGEDEEEGEGARYRGWKARRADIRKVIFEEEPRVQTLITCHYSSFSSSSS
SSSTNPIPSLPFSPPSASPSRPSLLFTRLQNASIFPSFLLHLTTHVPLVP
FLLEETDEEGGEGRKEGGRGALSKVHTPAYLSSLHALDAPPTKSPDPSSP
PSLSVSERQAVGAVRLAVDQVCAGRKRNALCLLPPPPPPSLPHSHHLVGP
AGLPSSSSSLSSLLNPVAAAVAHALDRYERVAVISLAHVHAQGTEECLQR
VNGGKDSGGAGRGMASMLFSIFTEEGGAEGGREGEEEGGSVHRVHVLPKK
ATGEEGREGGEEEGAFRRMVREEVLPELTKYSPQLILLSIDLETVSEDEG
GRERWMGLTGKEVGELVRQVQRVADVCSGGKMVCVMEGGREGGREGGREG
EAVVALVNGLIDPYMEEGKEEEEAKGEEAKEKTKKGGKEEGLVMDAADCY
SRECRTSQ*
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Synonyms
Publications