NO28G01270, NO28G01270 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO28G01270 vs. NCBI_GenBank
Match: XP_005853754.1 (hypothetical protein NGA_0476201 [Nannochloropsis gaditana CCMP526] >EKU22606.1 hypothetical protein NGA_0476201 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 335.5 bits (859), Expect = 6.300e-88 Identity = 159/235 (67.66%), Postives = 185/235 (78.72%), Query Frame = 0 Query: 177 PGGVCFASDMPELLKALESDSGCTIINLIIFADDSNEENDND--------TAFVFKNEVLVSRRVIIQGNSVMLPLLDCSSSNRCFRVLAGGYLELRYLRINQSRLGELRPANPLFEGITPTGMVREYRGSSAYFEPGAAGGRFLGVYFDDDQSDEFEWMLEENLAVTSFRIYGGYIFMAGGRLEFDFCFFWDFEFITPLDRIYVGGDVLVLAGEVSFTGCVWVYTTFFGVENGA 404 P CF DM EL +AL DS CT+I L+ + D + T FVF++E+LVS+RVIIQGNSV+LP LDCS S RCFRV+ GGYLELRY+RINQS G LRP NPL+EG T TGMVREYRGSS YFEPGA GGRFLGVYFDDDQSDE +W++E++ A+TSFRIYGG++FMAGGRL+F+ C F+DFEF+TPLDRIY+GGDVLVLAGEVSFTGCVW Y TF G ENGA Sbjct: 169 PDAACFVGDMEELAEALADDSECTVITLVSTSSRDGVSGDGNSIPSAAAQTPFVFRDEILVSKRVIIQGNSVLLPFLDCSQSIRCFRVMDGGYLELRYVRINQSDKGVLRPVNPLYEGFTVTGMVREYRGSSVYFEPGATGGRFLGVYFDDDQSDETDWIVEQSFALTSFRIYGGFVFMAGGRLQFELCLFYDFEFVTPLDRIYLGGDVLVLAGEVSFTGCVWAYITFLGFENGA 403
BLAST of NO28G01270 vs. NCBI_GenBank
Match: XP_005852539.1 (hypothetical protein NGA_0727200 [Nannochloropsis gaditana CCMP526] >EKU23293.1 hypothetical protein NGA_0727200 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 130.6 bits (327), Expect = 3.100e-26 Identity = 87/268 (32.46%), Postives = 126/268 (47.01%), Query Frame = 0 Query: 181 CFASDMPELLKALESDSGCTIINLIIFADDSNEENDNDTAFVFKNEVLVSRRVIIQGNSVMLPLLDCSSSNRCFRVLAGGYLELRYLRINQSRLGELRPANPLFE-------------------------------------------GITPTGMVREYRGSSAYFEPGAAGGRFLGVYFDDDQSDEFEWM--LEENLAVTSFRIYGGYIFMAGGRLEFDFCFFWDFEFITPL-DRIYVGGDVLVLAGEVSFTGCVWVYTTFFGVENG 403 C ++ EL A+E + C ++ L ++ E D A+V + E+++SR V++ GNSVMLP +DC R FRV+ GG+L+L+++RIN + G +RP LF G V + RG S YFEPGA GG F G+YF DQ+D + M +E+ + RI+GG++ +A G + F+ C F+D E +TPL DRIY W Y T G ENG Sbjct: 152 CRVANAGELEDAIERKT-CAVVIL------TSSEPD---AYVLEREIVISRAVVVMGNSVMLPFIDCKDIVRAFRVVPGGFLDLQFVRINIGK-GFVRPRWGLFRKQKTRRNLRGEEIILDEEEDDWREPRTKEEREMVRNLQLGGQAADAEPGEVIDIRGGSVYFEPGALGGTFNGIYFTSDQTDVEDIMVAIEQTTNLIGIRIWGGHVLVADGDVSFNACVFYDLELLTPLSDRIYXXXXXXXXXXXXXXXXXHWFYFTVIGAENG 408
BLAST of NO28G01270 vs. NCBI_GenBank
Match: EWM23493.1 (hypothetical protein Naga_100198g12 [Nannochloropsis gaditana]) HSP 1 Score: 123.2 bits (308), Expect = 4.900e-24 Identity = 79/231 (34.20%), Postives = 115/231 (49.78%), Query Frame = 0 Query: 177 PGGVCFASDMPELLKALESDSGCTIINLIIFADDSNEENDNDTAFVFKNEVLVSRRVIIQGNSVMLPLLDCSSSNRCFRVLAGGYLELRYLRINQSRLGELRPANP--LFEGITPTGMVREYRGSSAYFEPGAAGGRFLGVYF--DDDQSDEFEWMLEENLAVTSFRIYGGYIFMAGGRLEFDFCFFWDFEFITPLDRI-YVGGDVLVLAGEVSFTGCVWVYTTFFGVENG 403 P C +D EL A+E+ S C+I+ L + + E+LV R VI+ GN +LP++D + R F VL GG+L+LR+++ S G +R P +F +P V E RG S + + GA GG+F GV F D D D + ++ +RIYGG++F+ GGR++F C FWD I + Y+G DVL T FG+ENG Sbjct: 151 PEDGCEVNDGLELTDAIENQS-CSIVYL-----------KPGQLYELEREILVRREVIVMGNPSVLPMIDGEDAIRSFHVLEGGFLDLRFVQQFASD-GIVREPKPYEIFATTSPRNRVWEIRGGSVFIDEGALGGKFTGVIFIDDPDVEDAARRSIRRSIDGDVYRIYGGHVFIVGGRVDFVGCLFWDLTLIYTFGNVLYIGQDVLQXXXXXXXXXXXXXENTVFGIENG 368
BLAST of NO28G01270 vs. NCBI_GenBank
Match: EWM26475.1 (hypothetical protein Naga_100045g21 [Nannochloropsis gaditana]) HSP 1 Score: 118.6 bits (296), Expect = 1.200e-22 Identity = 71/219 (32.42%), Postives = 117/219 (53.42%), Query Frame = 0 Query: 181 CFASDMPELLKALESDSGCTIINLIIFADDSNEENDNDTAFVF--KNEVLVSRRVIIQGNSVMLPLLDCSSSNRCFRVLAGGYLELRYLRINQSRLGELRPANPLFEGITPTGMVREYRGSSAYFEPGAAGGRFLGVYFDDDQSDE--FEWMLEENLAVTSFRIYGGYIFMAGGRLEFDFCFFWDFEFITPL-DRIYVGGDVLVLAGEVSFTGCVWVYT 395 C+ ++ EL A+E ++ C ++ L N N A++ NE++V R V + G+ +LP +D R F ++ GG+LEL+Y+R+ Q +G R L + V E +G S E GA G F+GV F +++ E +++ + +T +RIYGG++++ G + F C FWD + P D++ +G D+LVLAG V TGC + T Sbjct: 204 CWPRNIVELQIAVE-EADCPLVVL---------TNPNPMAYMLMDMNEIMVMRHVRVLGHPALLPTIDAMMGMRAFTIMEGGFLELQYVRVRQG-MGMYRDRYGLEGRDDISSKVFEIKGGSVMLEEGAEGANFVGVIFLAVMTNQEMTEQAIQDQIDMTGWRIYGGHVYVTAGTVRFFNCHFWDSMILMPFTDQVAIGADILVLAGNVFVTGCTFTNT 411
BLAST of NO28G01270 vs. NCBI_GenBank
Match: EWM26075.1 (hypothetical protein Naga_100278g5 [Nannochloropsis gaditana]) HSP 1 Score: 117.9 bits (294), Expect = 2.100e-22 Identity = 75/243 (30.86%), Postives = 123/243 (50.62%), Query Frame = 0 Query: 181 CFASDMPELLKALESDSGCTIINLIIFADDSNEENDNDTAFVFKNEVLVSRRVIIQGNSVMLPLLDCSSSN---RCFRVLAGGYLELRYLRI--------------NQSRLGELRPANPLFEGITPTGMVREYRGSSAYFEPGAAGGRFLGVYFDD--DQSDEFEWMLEENLAVTSFRIYGGYIFMAGGRLEFDFCFFWDFEFITPL-DRIYVGGDVLVLAGEVSFTGCVWVYTTFFGVENGA 404 C+ EL++A++ + C+++ L N + A++ ++V R + I G+ V LP++D S+ N R FRV+ GG+L+L+Y+R+ NQ++ + + TG + E RG S E GA+G F GV F + + + ++ R YGG+IF+AGG ++F C FW + PL D+ +GGD+L+LAG ++ T C + TT FG GA Sbjct: 4 CYPQTADELVEAVQ-ELDCSLLFL---------TNSDPQAYLITQHIMVDRPIRIVGHPVFLPVIDASTLNMAPRAFRVVEGGFLDLQYIRVRAGVGETKERPVSSNQTQAESAFGETSGTQQVGVTGKILETRGGSVAIEQGASGANFEGVIFLSVANSWESVQEAIQATYTGMGGRTYGGHIFIAGGSVKFTNCHFWTTAILLPLTDQFSLGGDILMLAGTLTVTACTFTSTTMFGSLAGA 236
BLAST of NO28G01270 vs. NCBI_GenBank
Match: XP_005854372.1 (hypothetical protein NGA_0163600, partial [Nannochloropsis gaditana CCMP526] >EKU21987.1 hypothetical protein NGA_0163600, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 116.7 bits (291), Expect = 4.600e-22 Identity = 75/243 (30.86%), Postives = 123/243 (50.62%), Query Frame = 0 Query: 181 CFASDMPELLKALESDSGCTIINLIIFADDSNEENDNDTAFVFKNEVLVSRRVIIQGNSVMLPLLDCSSSN---RCFRVLAGGYLELRYLRI--------------NQSRLGELRPANPLFEGITPTGMVREYRGSSAYFEPGAAGGRFLGVYFDD--DQSDEFEWMLEENLAVTSFRIYGGYIFMAGGRLEFDFCFFWDFEFITPL-DRIYVGGDVLVLAGEVSFTGCVWVYTTFFGVENGA 404 C+ EL++A++ + C+++ L N + A++ ++V R + I G+ V LP++D S+ N R FRV+ GG+L+L+Y+R+ NQ++ + + TG + E RG S E GA+G F GV F + + + ++ R YGG+IF+AGG ++F C FW + PL D+ +GGD+L+LAG ++ T C + TT FG GA Sbjct: 139 CYPQTADELVEAVQ-ELDCSLLFL---------TNFDPQAYLITQHIMVDRPIRIVGHPVFLPVIDASTLNMAPRAFRVVEGGFLDLQYIRVRAGVGETKERPVSSNQTQAESAFGETSGTQQVGVTGKILETRGGSVAIEQGASGANFEGVIFLSVANSWESVQEAIQATYTGMGGRTYGGHIFIAGGSVKFTNCHFWTTAILLPLTDQFSLGGDILMLAGTLTVTACTFTSTTMFGSLAGA 371
BLAST of NO28G01270 vs. NCBI_GenBank
Match: XP_005854242.1 (hypothetical protein NGA_0025320 [Nannochloropsis gaditana CCMP526] >EKU22122.1 hypothetical protein NGA_0025320 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 106.7 bits (265), Expect = 4.800e-19 Identity = 62/171 (36.26%), Postives = 89/171 (52.05%), Query Frame = 0 Query: 237 GNSVMLPLLDCSSSNRCFRVLAGGYLELRYLRINQSRLGELRPANP--LFEGITPTGMVREYRGSSAYFEPGAAGGRFLGVYF--DDDQSDEFEWMLEENLAVTSFRIYGGYIFMAGGRLEFDFCFFWDFEFITPLDRI-YVGGDVLVLAGEVSFTGCVWVYTTFFGVENG 403 GN +LP++D + R F VL GG+L+LR+++ S G +R P +F +P V E RG S + + GA GG+F GV F D D D + ++ +RIYGG++F+ GGR++F C FWD I + Y+G DVL T FG+ENG Sbjct: 84 GNPSVLPMIDGEDAIRSFHVLEGGFLDLRFVQQFASD-GIVREPKPYEIFATTSPRNRVWEIRGGSVFIDEGALGGKFTGVIFIDDPDVEDAARRSIRRSIDGDVYRIYGGHVFIVGGRVDFVGCLFWDLTLIYTFGNVLYIGQDVLQXXXXXXXXXXXXXENTVFGIENG 253
BLAST of NO28G01270 vs. NCBI_GenBank
Match: XP_005853964.1 (hypothetical protein NGA_0462000 [Nannochloropsis gaditana CCMP526] >EKU22398.1 hypothetical protein NGA_0462000 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 100.1 bits (248), Expect = 4.500e-17 Identity = 62/189 (32.80%), Postives = 97/189 (51.32%), Query Frame = 0 Query: 181 CFASDMPELLKALESDSGCTIINLIIFADDSNEENDNDTAFVFKNEVLVSRRVIIQGNSVMLPLLDCSSSNRCFRVLAGGYLELRYLRINQSRLGELRPANPLFEGITPTGMVREYRGSSAYFEPGAAGGRFLGVYF--DDDQSDEFEWMLEENLAVTSFRIYGGYIFMAGGRLEFDFCFFWDFEFITP 368 C+ +D ELL A+E + GC ++ L + + A+ ++ V+R V + GN +LP +D + R F V GG LEL+++R+ Q G +R L EG + +V E RG EPGA G F+GV F + D + +E+ + RIYGG++++A G + F C FWD + P Sbjct: 115 CWPADGAELLDAVE-NQGCELVVL---------SSGDPDAYALDEDIKVNRYVRVMGNPAVLPQIDAEDAERAFTVGPGGLLELQFVRVRQGG-GTVRDRYGL-EGSGSSSVVGEVRGGCVSVEPGALGANFVGVTFIAVANDWDSVQGAIEDQIDFVGGRIYGGHVYVAAGTVNFFGCNFWDTTLLLP 291
BLAST of NO28G01270 vs. NCBI_GenBank
Match: EWM24109.1 (hypothetical protein Naga_100286g5 [Nannochloropsis gaditana]) HSP 1 Score: 100.1 bits (248), Expect = 4.500e-17 Identity = 62/189 (32.80%), Postives = 97/189 (51.32%), Query Frame = 0 Query: 181 CFASDMPELLKALESDSGCTIINLIIFADDSNEENDNDTAFVFKNEVLVSRRVIIQGNSVMLPLLDCSSSNRCFRVLAGGYLELRYLRINQSRLGELRPANPLFEGITPTGMVREYRGSSAYFEPGAAGGRFLGVYF--DDDQSDEFEWMLEENLAVTSFRIYGGYIFMAGGRLEFDFCFFWDFEFITP 368 C+ +D ELL A+E + GC ++ L + + A+ ++ V+R V + GN +LP +D + R F V GG LEL+++R+ Q G +R L EG + +V E RG EPGA G F+GV F + D + +E+ + RIYGG++++A G + F C FWD + P Sbjct: 134 CWPADGAELLDAVE-NQGCELVVL---------SSGDPDAYALDEDIKVNRYVRVMGNPAVLPQIDAEDAERAFTVGPGGLLELQFVRVRQGG-GTVRDRYGL-EGSGSSSVVGEVRGGCVSVEPGALGANFVGVTFIAVANDWDSVQGAIEDQIDFVGGRIYGGHVYVAAGTVNFFGCNFWDTTLLLP 310
BLAST of NO28G01270 vs. NCBI_GenBank
Match: EWM22206.1 (hypothetical protein Naga_100291g4 [Nannochloropsis gaditana]) HSP 1 Score: 87.0 bits (214), Expect = 3.900e-13 Identity = 46/115 (40.00%), Postives = 62/115 (53.91%), Query Frame = 0 Query: 291 GMVREYRGSSAYFEPGAAGGRFLGVYFDDDQSDEFEWM--LEENLAVTSFRIYGGYIFMAGGRLEFDFCFFWDFEFITPL-DRIYVGGDVLVLAGEVSFTGCVWVYTTFFGVENG 403 G V + RG S YFEPGA GG F G+YF DQ+D + + +E+ + RI+GG++ +A G + F+ C F+D E +TPL DRIY W Y T G ENG Sbjct: 17 GEVIDIRGGSVYFEPGALGGTFNGIYFTSDQTDVEDILVAIEQTTNLIGIRIWGGHVLVADGDVSFNACVFYDLELLTPLSDRIYXXXXXXXXXXXXXXXXXHWFYFTVIGAENG 131 The following BLAST results are available for this feature:
BLAST of NO28G01270 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 12
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO28G01270 ID=NO28G01270|Name=NO28G01270|organism=Nannochloropsis oceanica|type=gene|length=4446bpback to top protein sequence of NO28G01270.1 >NO28G01270.1-protein ID=NO28G01270.1-protein|Name=NO28G01270.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1117bpback to top Synonyms
Publications
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