NO28G01180, NO28G01180 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO28G01180 vs. NCBI_GenBank
Match: EWM20879.1 (amp-binding enzyme family protein, partial [Nannochloropsis gaditana]) HSP 1 Score: 203.4 bits (516), Expect = 2.900e-48 Identity = 148/363 (40.77%), Postives = 184/363 (50.69%), Query Frame = 0 Query: 499 GNNSNSILPSLRFVLVGGQALLPSLHLAASALMPRACFVQSYACSEACSSITFLSLPPPRPSSLPLSYPPSGCVGQAAHPVEVAILEAFAEDKE-----EKLPNAXXXXXXXXXXXPPP--------RRP----RSRSLLTGPGRVGEIVTRGPHLMTGYWQRPEATAAVLIYPSPPLPTSLPPPASDAARVRDEEGLEGGKE-GGPDNQGQMPLERGGRGIGRDGGGPWLRTGDLGMMDKEGNLHLVGRLADVIRSGGEKIMAAEVERVLLEHPSVAGVAVVGLPDRIYGERVVAVVVSR----SREGGREKELQAHCRKFLAGYKVPKEVVFRDVLPVTGSGKVRKAVLAKELSVKAQEEE 840 G S+LPS+ F+LVGGQAL L L A A MP+A QSYACS G +G A VEVA+L+ +++ E+ PP RRP R R + G+VGEI TRGPHLM GYW+RP ATAAVL+YP P SL + G P PWL TGDLG+MD +G LVGRLADVIR+G EK+M++EVE VL H V AVVG+PD ++GE+VVAVVV R +G ++EL HCR+ LAG+KVP+E FR VLPVTGSGKV K ++ L +QE + Sbjct: 48 GREGTSVLPSISFLLVGGQALPLPLFLRARASMPQARVFQSYACS--XXXXXXXXXXXXXXXXXXXXXXXXGSLGHPAPGVEVALLDVEGREEDRGADRERAGREGRFGPTVPSPSAPPDSSSSTETRRPGPGLRPRIFVDKVGKVGEIATRGPHLMNGYWRRPGATAAVLVYPQLS-PASLXXXXXXXXXXXXXXXXXXTQAFGTPKKXXXXXXXXXXXXXXXXXXXPWLCTGDLGVMDPDGRFRLVGRLADVIRTGAEKVMSSEVEGVLQMHHCVESAAVVGMPDDVFGEKVVAVVVLREGAGDGQGAVKEELVRHCRRHLAGFKVPREFEFRQVLPVTGSGKVNKHMVRAGLRKGSQESK 407
BLAST of NO28G01180 vs. NCBI_GenBank
Match: WP_040814776.1 (fatty-acid--CoA ligase [Nocardia concava]) HSP 1 Score: 147.1 bits (370), Expect = 2.400e-31 Identity = 103/325 (31.69%), Postives = 143/325 (44.00%), Query Frame = 0 Query: 506 LPSLRFVLVGGQALLPSLHLAASALMPRACFVQSYACSEACSSITFLSLPPPRPSSLPLSYPPSGCVGQAAHPVEVAILEAFAEDKEEKLPNAXXXXXXXXXXXPPPRRPRSRSLLTGPGRVGEIVTRGPHLMTGYWQRPEATAAVLIYPSPPLPTSLPPPASDAARVRDEEGLEGGKEGGPDNQGQMPLERGGRGIGRDGGGPWLRTGDLGMMDKEGNLHLVGRLADVIRSGGEKIMAAEVERVLLEHPSVAGVAVVGLPDRIYGERVVAVVVSRSREGGREKELQAHCRKFLAGYKVPKEVVFRDVLPVTGSGKVRKAVLAKE 831 L S+ V+ G + +L A L PRA FVQ+Y +EA IT L R L G A E+ I++ + GPG VGE++TRG H+M GYW +P+ TAA L RDG WL TGD G +D+ G LH+V R+ D+I SGGE + +AEVE + HP+VA VAV+G+PD +GERV AV+V + E E++ H + +A YK P+ V F D +PV+G+GK+ K L ++ Sbjct: 272 LSSVESVMYGASPISEALLERAMRLFPRAGFVQAYGQTEAAPIITLLGPEDHRSGRL-------RSAGTAVPHSEIRIVDGDGRE-------------------------------LGPGEVGEVLTRGGHVMAGYWNKPDETAAAL---------------------------------------------------RDG---WLHTGDGGYLDERGYLHIVDRIKDMIVSGGENVYSAEVENAIAAHPAVAAVAVIGVPDDNWGERVHAVIVCKPGHSATEDEIRTHTKTLIASYKAPRSVEFVDAMPVSGAGKILKRELREQ 504
BLAST of NO28G01180 vs. NCBI_GenBank
Match: WP_088278919.1 (AMP-dependent synthetase [Ideonella sp. A 288]) HSP 1 Score: 145.2 bits (365), Expect = 9.200e-31 Identity = 108/322 (33.54%), Postives = 148/322 (45.96%), Query Frame = 0 Query: 506 LPSLRFVLVGGQALLPSLHLAASALMPRACFVQSYACSEACSSITFLSLPPPRPSSLPLSYPPSGCVGQAAHPVEVAILEAFAEDKEEKLPNAXXXXXXXXXXXPPPRRPRSRSLLTGPGRVGEIVTRGPHLMTGYWQRPEATAAVLIYPSPPLPTSLPPPASDAARVRDEEGLEGGKEGGPDNQGQMPLERGGRGIGRDGGGPWLRTGDLGMMDKEGNLHLVGRLADVIRSGGEKIMAAEVERVLLEHPSVAGVAVVGLPDRIYGERVVAVVVSRSREGGREKELQAHCRKFLAGYKVPKEVVFRDVLPVTGSGKVRKAVL 828 L SLR + G + P L A P A F Q+Y +E +++ RP + L S VG+A E+ I+ +++ +++P G VGEIV RGP +M GYW++PEATA L RDG WL TGD G MD G++ +V RL D++ +GGE + EVE VL HP+VA AVVG+PD +GE V AVVV R+ + E L+AHCR LAGYK P+ ++F D LP++ +GKV+KAVL Sbjct: 257 LQSLRRIAFGAAPMPPDLLDRALQAWPEAEFFQAYGLTETAAAVCINPPAHHRPEARGLGLLDS--VGRAGLGAEIRIV----DERGDEVPR---------------------------GTVGEIVVRGPMVMAGYWRQPEATAEAL---------------------------------------------------RDG---WLHTGDAGRMDAAGHMWVVDRLKDMVITGGENVYCVEVETVLRSHPAVADAAVVGVPDAQWGEAVQAVVVRRAGQAVDEDALRAHCRTRLAGYKCPRGILFVDALPLSAAGKVQKAVL 491
BLAST of NO28G01180 vs. NCBI_GenBank
Match: OFX28354.1 (hypothetical protein A2Z07_04050 [Armatimonadetes bacterium RBG_16_67_12]) HSP 1 Score: 144.8 bits (364), Expect = 1.200e-30 Identity = 87/204 (42.65%), Postives = 112/204 (54.90%), Query Frame = 0 Query: 624 PGRVGEIVTRGPHLMTGYWQRPEATAAVLIYPSPPLPTSLPPPASDAARVRDEEGLEGGKEGGPDNQGQMPLERGGRGIGRDGGGPWLRTGDLGMMDKEGNLHLVGRLADVIRSGGEKIMAAEVERVLLEHPSVAGVAVVGLPDRIYGERVVAVVVSRSREGGREKELQAHCRKFLAGYKVPKEVVFRDVLPVTGSGKVRKAVL 828 PG++GEI RGP+L +GYW+ PEATA P +LP P AAR EG+ GG D G W +GDLG D EG ++V R D+I SGGE I EVE+VL +HP++A VAV+G+PD +GE +AV+V R +E+ AHC LA YK+P+ V F DVLP +GKV K L Sbjct: 340 PGQIGEIWLRGPNLFSGYWRLPEATAEAYSLPEDADDPALPAPEEAAAR---REGVAGG----------------------DYRGWWFHSGDLGYADDEGFFYIVDRKKDMIISGGENIYPVEVEQVLYQHPAIADVAVIGIPDDRWGEAPMAVIVGRQGASVTVEEIVAHCEGRLARYKIPRRVSFVDVLPRNAAGKVLKREL 518
BLAST of NO28G01180 vs. NCBI_GenBank
Match: WP_084023477.1 (hypothetical protein [Mycobacterium avium]) HSP 1 Score: 144.8 bits (364), Expect = 1.200e-30 Identity = 86/207 (41.55%), Postives = 106/207 (51.21%), Query Frame = 0 Query: 625 GRVGEIVTRGPHLMTGYWQRPEATAAVLIYPSPPLPTSLPPPASDAARVRDEEGLEGGKEGGPDNQGQMPLERGGRGIGRDGGGPWLRTGDLGMMDKEGNLHLVGRLADVIRSGGEKIMAAEVERVLLEHPSVAGVAVVGLPDRIYGERVVAVVVSRSREGGREKELQAHCRKFLAGYKVPKEVVFRDVLPVTGSGKVRKAVLAKEL 832 G GE++ R P + +GYW +P+ATAA ++ DG W TGD G+ DK+GNL LV RL D+I SGGE I +AEVER L HPSV VAVVG PD+ +GERVVA VV EL +HCR +AGYKVPKE+ D LP T SGKV+KA L ++L Sbjct: 371 GATGEVLVRSPWMFSGYWNKPDATAAAIV---------------------------------------------------DG---WYHTGDAGIRDKDGNLFLVDRLKDMIVSGGENIYSAEVERALAAHPSVQSVAVVGAPDQKWGERVVAFVVPYPDRPADVSELVSHCRGLIAGYKVPKEIHVLDALPQTASGKVQKAALRQQL 523
BLAST of NO28G01180 vs. NCBI_GenBank
Match: WP_084042492.1 (hypothetical protein [Mycobacterium avium]) HSP 1 Score: 142.9 bits (359), Expect = 4.600e-30 Identity = 84/207 (40.58%), Postives = 107/207 (51.69%), Query Frame = 0 Query: 625 GRVGEIVTRGPHLMTGYWQRPEATAAVLIYPSPPLPTSLPPPASDAARVRDEEGLEGGKEGGPDNQGQMPLERGGRGIGRDGGGPWLRTGDLGMMDKEGNLHLVGRLADVIRSGGEKIMAAEVERVLLEHPSVAGVAVVGLPDRIYGERVVAVVVSRSREGGREKELQAHCRKFLAGYKVPKEVVFRDVLPVTGSGKVRKAVLAKEL 832 G GE++ R P + +GYW +P+ATAA ++ DG W TGD G+ +K+GNL LV RL D+I SGGE I +AEVER L HPSV VAVVG PD+ +GERVVA VV+ +L +HCR +AGYKVPKE+ D LP T SGKV+KA L ++L Sbjct: 352 GDTGEVLVRSPWMFSGYWNKPDATAAAIV---------------------------------------------------DG---WYHTGDAGIRNKDGNLFLVDRLKDMIVSGGENIYSAEVERALAAHPSVQSVAVVGAPDQKWGERVVAFVVTYPDRPADVSDLMSHCRGLIAGYKVPKEIHVLDALPQTASGKVQKAALRQQL 504
BLAST of NO28G01180 vs. NCBI_GenBank
Match: WP_025356675.1 (fatty-acid--CoA ligase [Kutzneria albida] >AHH96546.1 feruloyl-CoA synthetase [Kutzneria albida DSM 43870]) HSP 1 Score: 141.7 bits (356), Expect = 1.000e-29 Identity = 103/324 (31.79%), Postives = 144/324 (44.44%), Query Frame = 0 Query: 506 LPSLRFVLVGGQALLPSLHLAASALMPRACFVQSYACSEACSSITFLSLPPPRPSSLPLSYPPSGCVGQAAHPVEVAILEAFAEDKEEKLPNAXXXXXXXXXXXPPPRRPRSRSLLTGPGRVGEIVTRGPHLMTGYWQRPEATAAVLIYPSPPLPTSLPPPASDAARVRDEEGLEGGKEGGPDNQGQMPLERGGRGIGRDGGGPWLRTGDLGMMDKEGNLHLVGRLADVIRSGGEKIMAAEVERVLLEHPSVAGVAVVGLPDRIYGERVVAVVVSRSREGGREKELQAHCRKFLAGYKVPKEVVFRDVLPVTGSGKVRKAVLAK 830 L SLR +L G + ++ +AL+P Q+Y +E T L L S G+A +V +++ AED E G VGE+V RG H+M GYW +PE T E+ L GG W+ TGD G +D+ G L++V R+ D+I SGGE + +AEVE L +HPSVA AV+G+PD+ +GERV AVVV E+EL+ HC++F+AGYK P+ V F + LPV+G+GK+ K L K Sbjct: 271 LSSLRQLLYGASVISDAVLQRTAALLPEVRLTQAYGMTELSPVATMLMAEDHEDPQLRRS------AGRAGPHAQVRVVD--AEDNE-----------------------------VPTGTVGEVVVRGGHVMLGYWNKPEET---------------------------EQALRGG---------------------------WMHTGDGGYLDERGYLYIVDRIKDMIVSGGENVYSAEVENALAKHPSVASCAVIGVPDKEWGERVHAVVVLLPGASAGEEELREHCKQFIAGYKAPRSVEFVEALPVSGAGKILKRELRK 503
BLAST of NO28G01180 vs. NCBI_GenBank
Match: WP_087647210.1 (fatty-acid--CoA ligase [Caballeronia choica] >SAL77262.1 AMP-dependent synthetase and ligase [Caballeronia choica]) HSP 1 Score: 141.4 bits (355), Expect = 1.300e-29 Identity = 106/324 (32.72%), Postives = 144/324 (44.44%), Query Frame = 0 Query: 506 LPSLRFVLVGGQALLPSLHLAASALMPRACFVQSYACSEACSSITFLSLPPPRPSSLPLSYPPSGCVGQAAHPVEVAILEAFAEDKEEKLPNAXXXXXXXXXXXPPPRRPRSRSLLTGPGRVGEIVTRGPHLMTGYWQRPEATAAVLIYPSPPLPTSLPPPASDAARVRDEEGLEGGKEGGPDNQGQMPLERGGRGIGRDGGGPWLRTGDLGMMDKEGNLHLVGRLADVIRSGGEKIMAAEVERVLLEHPSVAGVAVVGLPDRIYGERVVAVVVSRSREGGREKELQAHCRKFLAGYKVPKEVVFRDVLPVTGSGKVRKAVLAK 830 L SLR ++ G + +L A A P A F Q Y +E S+T L P S ++ +G A VEV I++ + PR G VGEI RGP++M GYW RPEATA + R+G W+ TGD G MD EG ++LV RL D+I SGGE + +AEVE ++ HP+VA AV+G+P +GE V AVVV++ +E+Q HCR+ +AGYK P+ V F D +P++G GKV K L K Sbjct: 276 LSSLRNLIYGAAPMSQTLLARARAAFPSARFYQGYGMTELAPSVTLLM--PEFHSDAGIASGKMRSIGTAVSMVEVKIVDVHGVEV-----------------------PR--------GTVGEIAVRGPNVMLGYWNRPEATAQAI---------------------------------------------------RNG---WMHTGDGGYMDDEGFVYLVDRLKDMIVSGGENVYSAEVENAVVSHPAVAQCAVIGVPHEKWGETVHAVVVTKPGHSVTLEEIQIHCRELIAGYKCPRSVSFVDAMPLSGVGKVLKTELRK 512
BLAST of NO28G01180 vs. NCBI_GenBank
Match: WP_062801065.1 (acyl-CoA synthetase [Cupriavidus nantongensis] >AMR79236.1 acyl-CoA synthetase [Cupriavidus nantongensis]) HSP 1 Score: 141.0 bits (354), Expect = 1.700e-29 Identity = 107/331 (32.33%), Postives = 145/331 (43.81%), Query Frame = 0 Query: 508 SLRFVLVGGQALLPS-LHLAASALMPRACFVQSYACSEACSSITFLSLPPPRPSSLPLSYPPSGCVGQAAHPVEVAILEAFAEDKEEKLPNAXXXXXXXXXXXPPPRRPRSRSLLTGPGRVGEIVTRGPHLMTGYWQRPEATAAVLIYPSPPLPTSLPPPASDAARVRDEEGLEGGKEGGPDNQGQMPLERGGRGIGRDGGGPWLRTGDLGMMDKEGNLHLVGRLADVIRSGGEKIMAAEVERVLLEHPSVAGVAVVGLPDRIYGERVVAVVVSRSREGGREKELQAHCRKFLAGYKVPKEVVFRDVLPVTGSGKVRKAVLAKELSVKAQE 838 SLR+ + GG+ + +H A A P A ++ +Y +E CS T + P + +G P+ +E AED E + GPG GEI RGP + GYW+ PE TAA PD W RTGD+G +DK+G L+L RL D+I SGGE I ++EVERVL P V+ +GLPD +GE+VVAVVV R EKE+ +HCR LAG+K+PK ++ + LP T SGKV K VL ++ + A E Sbjct: 265 SLRWAIGGGERTPEARIHDFAEA-FPTARYIDAYGLTETCSGDTMME--PGKELEK---------IGSTGRPLPHVAIEIRAEDGE----------------------------VLGPGEPGEICIRGPKVTPGYWREPERTAAAFF---------------------------------PDG--------------------WFRTGDVGYLDKDGFLYLTDRLKDMIISGGENIASSEVERVLYLLPQVSEAVAIGLPDERWGEQVVAVVVLRPGMTLSEKEMMSHCRSLLAGFKIPKRLIISEALPRTPSGKVLKRVLREQCAPPAGE 502
BLAST of NO28G01180 vs. NCBI_GenBank
Match: WP_077145656.1 (hypothetical protein [Sphingopyxis sp. KK2]) HSP 1 Score: 141.0 bits (354), Expect = 1.700e-29 Identity = 109/322 (33.85%), Postives = 145/322 (45.03%), Query Frame = 0 Query: 506 LPSLRFVLVGGQALLPSLHLAASALMPRACFVQSYACSEACSSITFLSLPPPRPSSLPLSYPPSGCVGQAAHPVEVAILEAFAEDKEEKLPNAXXXXXXXXXXXPPPRRPRSRSLLTGPGRVGEIVTRGPHLMTGYWQRPEATAAVLIYPSPPLPTSLPPPASDAARVRDEEGLEGGKEGGPDNQGQMPLERGGRGIGRDGGGPWLRTGDLGMMDKEGNLHLVGRLADVIRSGGEKIMAAEVERVLLEHPSVAGVAVVGLPDRIYGERVVAVVVSRSREGGREKELQAHCRKFLAGYKVPKEVVFRDVLPVTGSGKVRKAVL 828 L S+ + G + P+L A A MPR FVQ Y +E SI+ L R + S G+A +E I++ A+D E + G +GEIV RG +MTGYW RPE +A E L GG W+ TGD+G MD+ G +H+V RL D+I +GGE + + EVE VL +HP+VA AVVG PD +GERV AVVV+RS +E+ AHCR LA YK P+ V FR LP++ +GK+ KA L Sbjct: 266 LTSVERIYYGAAPMPPALMDRAIAAMPRVGFVQGYGMTETSGSISLLKPADHRDPARRRS------AGRAVMAIEARIVD--ADDNEVPV-----------------------------GEIGEIVARGEAVMTGYWNRPEESA---------------------------EALRGG---------------------------WMHTGDVGRMDEHGYIHVVDRLKDMIITGGENVYSVEVEAVLSQHPAVAQCAVVGQPDPHWGERVHAVVVARS--DATAEEVIAHCRDRLAAYKCPRSVEFRRELPLSAAGKILKAAL 494 The following BLAST results are available for this feature:
BLAST of NO28G01180 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO28G01180 ID=NO28G01180|Name=NO28G01180|organism=Nannochloropsis oceanica|type=gene|length=2889bpback to top protein sequence of NO28G01180.1 >NO28G01180.1-protein ID=NO28G01180.1-protein|Name=NO28G01180.1|organism=Nannochloropsis oceanica|type=polypeptide|length=849bpback to top Synonyms
Publications
|