NO28G01180, NO28G01180 (gene) Nannochloropsis oceanica

Overview
NameNO28G01180
Unique NameNO28G01180
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2889
Alignment locationchr28:367743..370631 -

Link to JBrowse

Properties
Property NameValue
DescriptionAmp-binding enzyme family protein
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr28genomechr28:367743..370631 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0003824catalytic activity
Vocabulary: INTERPRO
TermDefinition
IPR025110AMP-bd_C
IPR000873AMP-dep_Synth/Lig
Homology
BLAST of NO28G01180 vs. NCBI_GenBank
Match: EWM20879.1 (amp-binding enzyme family protein, partial [Nannochloropsis gaditana])

HSP 1 Score: 203.4 bits (516), Expect = 2.900e-48
Identity = 148/363 (40.77%), Postives = 184/363 (50.69%), Query Frame = 0
Query:  499 GNNSNSILPSLRFVLVGGQALLPSLHLAASALMPRACFVQSYACSEACSSITFLSLPPPRPSSLPLSYPPSGCVGQAAHPVEVAILEAFAEDKE-----EKLPNAXXXXXXXXXXXPPP--------RRP----RSRSLLTGPGRVGEIVTRGPHLMTGYWQRPEATAAVLIYPSPPLPTSLPPPASDAARVRDEEGLEGGKE-GGPDNQGQMPLERGGRGIGRDGGGPWLRTGDLGMMDKEGNLHLVGRLADVIRSGGEKIMAAEVERVLLEHPSVAGVAVVGLPDRIYGERVVAVVVSR----SREGGREKELQAHCRKFLAGYKVPKEVVFRDVLPVTGSGKVRKAVLAKELSVKAQEEE 840
            G    S+LPS+ F+LVGGQAL   L L A A MP+A   QSYACS                          G +G  A  VEVA+L+    +++     E+                PP        RRP    R R  +   G+VGEI TRGPHLM GYW+RP ATAAVL+YP    P SL                   +  G P                     PWL TGDLG+MD +G   LVGRLADVIR+G EK+M++EVE VL  H  V   AVVG+PD ++GE+VVAVVV R      +G  ++EL  HCR+ LAG+KVP+E  FR VLPVTGSGKV K ++   L   +QE +
Sbjct:   48 GREGTSVLPSISFLLVGGQALPLPLFLRARASMPQARVFQSYACS--XXXXXXXXXXXXXXXXXXXXXXXXGSLGHPAPGVEVALLDVEGREEDRGADRERAGREGRFGPTVPSPSAPPDSSSSTETRRPGPGLRPRIFVDKVGKVGEIATRGPHLMNGYWRRPGATAAVLVYPQLS-PASLXXXXXXXXXXXXXXXXXXTQAFGTPKKXXXXXXXXXXXXXXXXXXXPWLCTGDLGVMDPDGRFRLVGRLADVIRTGAEKVMSSEVEGVLQMHHCVESAAVVGMPDDVFGEKVVAVVVLREGAGDGQGAVKEELVRHCRRHLAGFKVPREFEFRQVLPVTGSGKVNKHMVRAGLRKGSQESK 407          
BLAST of NO28G01180 vs. NCBI_GenBank
Match: WP_040814776.1 (fatty-acid--CoA ligase [Nocardia concava])

HSP 1 Score: 147.1 bits (370), Expect = 2.400e-31
Identity = 103/325 (31.69%), Postives = 143/325 (44.00%), Query Frame = 0
Query:  506 LPSLRFVLVGGQALLPSLHLAASALMPRACFVQSYACSEACSSITFLSLPPPRPSSLPLSYPPSGCVGQAAHPVEVAILEAFAEDKEEKLPNAXXXXXXXXXXXPPPRRPRSRSLLTGPGRVGEIVTRGPHLMTGYWQRPEATAAVLIYPSPPLPTSLPPPASDAARVRDEEGLEGGKEGGPDNQGQMPLERGGRGIGRDGGGPWLRTGDLGMMDKEGNLHLVGRLADVIRSGGEKIMAAEVERVLLEHPSVAGVAVVGLPDRIYGERVVAVVVSRSREGGREKELQAHCRKFLAGYKVPKEVVFRDVLPVTGSGKVRKAVLAKE 831
            L S+  V+ G   +  +L   A  L PRA FVQ+Y  +EA   IT L     R   L          G A    E+ I++    +                                GPG VGE++TRG H+M GYW +P+ TAA L                                                   RDG   WL TGD G +D+ G LH+V R+ D+I SGGE + +AEVE  +  HP+VA VAV+G+PD  +GERV AV+V +      E E++ H +  +A YK P+ V F D +PV+G+GK+ K  L ++
Sbjct:  272 LSSVESVMYGASPISEALLERAMRLFPRAGFVQAYGQTEAAPIITLLGPEDHRSGRL-------RSAGTAVPHSEIRIVDGDGRE-------------------------------LGPGEVGEVLTRGGHVMAGYWNKPDETAAAL---------------------------------------------------RDG---WLHTGDGGYLDERGYLHIVDRIKDMIVSGGENVYSAEVENAIAAHPAVAAVAVIGVPDDNWGERVHAVIVCKPGHSATEDEIRTHTKTLIASYKAPRSVEFVDAMPVSGAGKILKRELREQ 504          
BLAST of NO28G01180 vs. NCBI_GenBank
Match: WP_088278919.1 (AMP-dependent synthetase [Ideonella sp. A 288])

HSP 1 Score: 145.2 bits (365), Expect = 9.200e-31
Identity = 108/322 (33.54%), Postives = 148/322 (45.96%), Query Frame = 0
Query:  506 LPSLRFVLVGGQALLPSLHLAASALMPRACFVQSYACSEACSSITFLSLPPPRPSSLPLSYPPSGCVGQAAHPVEVAILEAFAEDKEEKLPNAXXXXXXXXXXXPPPRRPRSRSLLTGPGRVGEIVTRGPHLMTGYWQRPEATAAVLIYPSPPLPTSLPPPASDAARVRDEEGLEGGKEGGPDNQGQMPLERGGRGIGRDGGGPWLRTGDLGMMDKEGNLHLVGRLADVIRSGGEKIMAAEVERVLLEHPSVAGVAVVGLPDRIYGERVVAVVVSRSREGGREKELQAHCRKFLAGYKVPKEVVFRDVLPVTGSGKVRKAVL 828
            L SLR +  G   + P L   A    P A F Q+Y  +E  +++        RP +  L    S  VG+A    E+ I+    +++ +++P                            G VGEIV RGP +M GYW++PEATA  L                                                   RDG   WL TGD G MD  G++ +V RL D++ +GGE +   EVE VL  HP+VA  AVVG+PD  +GE V AVVV R+ +   E  L+AHCR  LAGYK P+ ++F D LP++ +GKV+KAVL
Sbjct:  257 LQSLRRIAFGAAPMPPDLLDRALQAWPEAEFFQAYGLTETAAAVCINPPAHHRPEARGLGLLDS--VGRAGLGAEIRIV----DERGDEVPR---------------------------GTVGEIVVRGPMVMAGYWRQPEATAEAL---------------------------------------------------RDG---WLHTGDAGRMDAAGHMWVVDRLKDMVITGGENVYCVEVETVLRSHPAVADAAVVGVPDAQWGEAVQAVVVRRAGQAVDEDALRAHCRTRLAGYKCPRGILFVDALPLSAAGKVQKAVL 491          
BLAST of NO28G01180 vs. NCBI_GenBank
Match: OFX28354.1 (hypothetical protein A2Z07_04050 [Armatimonadetes bacterium RBG_16_67_12])

HSP 1 Score: 144.8 bits (364), Expect = 1.200e-30
Identity = 87/204 (42.65%), Postives = 112/204 (54.90%), Query Frame = 0
Query:  624 PGRVGEIVTRGPHLMTGYWQRPEATAAVLIYPSPPLPTSLPPPASDAARVRDEEGLEGGKEGGPDNQGQMPLERGGRGIGRDGGGPWLRTGDLGMMDKEGNLHLVGRLADVIRSGGEKIMAAEVERVLLEHPSVAGVAVVGLPDRIYGERVVAVVVSRSREGGREKELQAHCRKFLAGYKVPKEVVFRDVLPVTGSGKVRKAVL 828
            PG++GEI  RGP+L +GYW+ PEATA     P      +LP P   AAR    EG+ GG                      D  G W  +GDLG  D EG  ++V R  D+I SGGE I   EVE+VL +HP++A VAV+G+PD  +GE  +AV+V R       +E+ AHC   LA YK+P+ V F DVLP   +GKV K  L
Sbjct:  340 PGQIGEIWLRGPNLFSGYWRLPEATAEAYSLPEDADDPALPAPEEAAAR---REGVAGG----------------------DYRGWWFHSGDLGYADDEGFFYIVDRKKDMIISGGENIYPVEVEQVLYQHPAIADVAVIGIPDDRWGEAPMAVIVGRQGASVTVEEIVAHCEGRLARYKIPRRVSFVDVLPRNAAGKVLKREL 518          
BLAST of NO28G01180 vs. NCBI_GenBank
Match: WP_084023477.1 (hypothetical protein [Mycobacterium avium])

HSP 1 Score: 144.8 bits (364), Expect = 1.200e-30
Identity = 86/207 (41.55%), Postives = 106/207 (51.21%), Query Frame = 0
Query:  625 GRVGEIVTRGPHLMTGYWQRPEATAAVLIYPSPPLPTSLPPPASDAARVRDEEGLEGGKEGGPDNQGQMPLERGGRGIGRDGGGPWLRTGDLGMMDKEGNLHLVGRLADVIRSGGEKIMAAEVERVLLEHPSVAGVAVVGLPDRIYGERVVAVVVSRSREGGREKELQAHCRKFLAGYKVPKEVVFRDVLPVTGSGKVRKAVLAKEL 832
            G  GE++ R P + +GYW +P+ATAA ++                                                   DG   W  TGD G+ DK+GNL LV RL D+I SGGE I +AEVER L  HPSV  VAVVG PD+ +GERVVA VV          EL +HCR  +AGYKVPKE+   D LP T SGKV+KA L ++L
Sbjct:  371 GATGEVLVRSPWMFSGYWNKPDATAAAIV---------------------------------------------------DG---WYHTGDAGIRDKDGNLFLVDRLKDMIVSGGENIYSAEVERALAAHPSVQSVAVVGAPDQKWGERVVAFVVPYPDRPADVSELVSHCRGLIAGYKVPKEIHVLDALPQTASGKVQKAALRQQL 523          
BLAST of NO28G01180 vs. NCBI_GenBank
Match: WP_084042492.1 (hypothetical protein [Mycobacterium avium])

HSP 1 Score: 142.9 bits (359), Expect = 4.600e-30
Identity = 84/207 (40.58%), Postives = 107/207 (51.69%), Query Frame = 0
Query:  625 GRVGEIVTRGPHLMTGYWQRPEATAAVLIYPSPPLPTSLPPPASDAARVRDEEGLEGGKEGGPDNQGQMPLERGGRGIGRDGGGPWLRTGDLGMMDKEGNLHLVGRLADVIRSGGEKIMAAEVERVLLEHPSVAGVAVVGLPDRIYGERVVAVVVSRSREGGREKELQAHCRKFLAGYKVPKEVVFRDVLPVTGSGKVRKAVLAKEL 832
            G  GE++ R P + +GYW +P+ATAA ++                                                   DG   W  TGD G+ +K+GNL LV RL D+I SGGE I +AEVER L  HPSV  VAVVG PD+ +GERVVA VV+         +L +HCR  +AGYKVPKE+   D LP T SGKV+KA L ++L
Sbjct:  352 GDTGEVLVRSPWMFSGYWNKPDATAAAIV---------------------------------------------------DG---WYHTGDAGIRNKDGNLFLVDRLKDMIVSGGENIYSAEVERALAAHPSVQSVAVVGAPDQKWGERVVAFVVTYPDRPADVSDLMSHCRGLIAGYKVPKEIHVLDALPQTASGKVQKAALRQQL 504          
BLAST of NO28G01180 vs. NCBI_GenBank
Match: WP_025356675.1 (fatty-acid--CoA ligase [Kutzneria albida] >AHH96546.1 feruloyl-CoA synthetase [Kutzneria albida DSM 43870])

HSP 1 Score: 141.7 bits (356), Expect = 1.000e-29
Identity = 103/324 (31.79%), Postives = 144/324 (44.44%), Query Frame = 0
Query:  506 LPSLRFVLVGGQALLPSLHLAASALMPRACFVQSYACSEACSSITFLSLPPPRPSSLPLSYPPSGCVGQAAHPVEVAILEAFAEDKEEKLPNAXXXXXXXXXXXPPPRRPRSRSLLTGPGRVGEIVTRGPHLMTGYWQRPEATAAVLIYPSPPLPTSLPPPASDAARVRDEEGLEGGKEGGPDNQGQMPLERGGRGIGRDGGGPWLRTGDLGMMDKEGNLHLVGRLADVIRSGGEKIMAAEVERVLLEHPSVAGVAVVGLPDRIYGERVVAVVVSRSREGGREKELQAHCRKFLAGYKVPKEVVFRDVLPVTGSGKVRKAVLAK 830
            L SLR +L G   +  ++    +AL+P     Q+Y  +E     T L         L  S       G+A    +V +++  AED E                                G VGE+V RG H+M GYW +PE T                           E+ L GG                           W+ TGD G +D+ G L++V R+ D+I SGGE + +AEVE  L +HPSVA  AV+G+PD+ +GERV AVVV        E+EL+ HC++F+AGYK P+ V F + LPV+G+GK+ K  L K
Sbjct:  271 LSSLRQLLYGASVISDAVLQRTAALLPEVRLTQAYGMTELSPVATMLMAEDHEDPQLRRS------AGRAGPHAQVRVVD--AEDNE-----------------------------VPTGTVGEVVVRGGHVMLGYWNKPEET---------------------------EQALRGG---------------------------WMHTGDGGYLDERGYLYIVDRIKDMIVSGGENVYSAEVENALAKHPSVASCAVIGVPDKEWGERVHAVVVLLPGASAGEEELREHCKQFIAGYKAPRSVEFVEALPVSGAGKILKRELRK 503          
BLAST of NO28G01180 vs. NCBI_GenBank
Match: WP_087647210.1 (fatty-acid--CoA ligase [Caballeronia choica] >SAL77262.1 AMP-dependent synthetase and ligase [Caballeronia choica])

HSP 1 Score: 141.4 bits (355), Expect = 1.300e-29
Identity = 106/324 (32.72%), Postives = 144/324 (44.44%), Query Frame = 0
Query:  506 LPSLRFVLVGGQALLPSLHLAASALMPRACFVQSYACSEACSSITFLSLPPPRPSSLPLSYPPSGCVGQAAHPVEVAILEAFAEDKEEKLPNAXXXXXXXXXXXPPPRRPRSRSLLTGPGRVGEIVTRGPHLMTGYWQRPEATAAVLIYPSPPLPTSLPPPASDAARVRDEEGLEGGKEGGPDNQGQMPLERGGRGIGRDGGGPWLRTGDLGMMDKEGNLHLVGRLADVIRSGGEKIMAAEVERVLLEHPSVAGVAVVGLPDRIYGERVVAVVVSRSREGGREKELQAHCRKFLAGYKVPKEVVFRDVLPVTGSGKVRKAVLAK 830
            L SLR ++ G   +  +L   A A  P A F Q Y  +E   S+T L   P   S   ++      +G A   VEV I++    +                        PR        G VGEI  RGP++M GYW RPEATA  +                                                   R+G   W+ TGD G MD EG ++LV RL D+I SGGE + +AEVE  ++ HP+VA  AV+G+P   +GE V AVVV++       +E+Q HCR+ +AGYK P+ V F D +P++G GKV K  L K
Sbjct:  276 LSSLRNLIYGAAPMSQTLLARARAAFPSARFYQGYGMTELAPSVTLLM--PEFHSDAGIASGKMRSIGTAVSMVEVKIVDVHGVEV-----------------------PR--------GTVGEIAVRGPNVMLGYWNRPEATAQAI---------------------------------------------------RNG---WMHTGDGGYMDDEGFVYLVDRLKDMIVSGGENVYSAEVENAVVSHPAVAQCAVIGVPHEKWGETVHAVVVTKPGHSVTLEEIQIHCRELIAGYKCPRSVSFVDAMPLSGVGKVLKTELRK 512          
BLAST of NO28G01180 vs. NCBI_GenBank
Match: WP_062801065.1 (acyl-CoA synthetase [Cupriavidus nantongensis] >AMR79236.1 acyl-CoA synthetase [Cupriavidus nantongensis])

HSP 1 Score: 141.0 bits (354), Expect = 1.700e-29
Identity = 107/331 (32.33%), Postives = 145/331 (43.81%), Query Frame = 0
Query:  508 SLRFVLVGGQALLPS-LHLAASALMPRACFVQSYACSEACSSITFLSLPPPRPSSLPLSYPPSGCVGQAAHPVEVAILEAFAEDKEEKLPNAXXXXXXXXXXXPPPRRPRSRSLLTGPGRVGEIVTRGPHLMTGYWQRPEATAAVLIYPSPPLPTSLPPPASDAARVRDEEGLEGGKEGGPDNQGQMPLERGGRGIGRDGGGPWLRTGDLGMMDKEGNLHLVGRLADVIRSGGEKIMAAEVERVLLEHPSVAGVAVVGLPDRIYGERVVAVVVSRSREGGREKELQAHCRKFLAGYKVPKEVVFRDVLPVTGSGKVRKAVLAKELSVKAQE 838
            SLR+ + GG+    + +H  A A  P A ++ +Y  +E CS  T +   P +             +G    P+    +E  AED E                            + GPG  GEI  RGP +  GYW+ PE TAA                                    PD                     W RTGD+G +DK+G L+L  RL D+I SGGE I ++EVERVL   P V+    +GLPD  +GE+VVAVVV R      EKE+ +HCR  LAG+K+PK ++  + LP T SGKV K VL ++ +  A E
Sbjct:  265 SLRWAIGGGERTPEARIHDFAEA-FPTARYIDAYGLTETCSGDTMME--PGKELEK---------IGSTGRPLPHVAIEIRAEDGE----------------------------VLGPGEPGEICIRGPKVTPGYWREPERTAAAFF---------------------------------PDG--------------------WFRTGDVGYLDKDGFLYLTDRLKDMIISGGENIASSEVERVLYLLPQVSEAVAIGLPDERWGEQVVAVVVLRPGMTLSEKEMMSHCRSLLAGFKIPKRLIISEALPRTPSGKVLKRVLREQCAPPAGE 502          
BLAST of NO28G01180 vs. NCBI_GenBank
Match: WP_077145656.1 (hypothetical protein [Sphingopyxis sp. KK2])

HSP 1 Score: 141.0 bits (354), Expect = 1.700e-29
Identity = 109/322 (33.85%), Postives = 145/322 (45.03%), Query Frame = 0
Query:  506 LPSLRFVLVGGQALLPSLHLAASALMPRACFVQSYACSEACSSITFLSLPPPRPSSLPLSYPPSGCVGQAAHPVEVAILEAFAEDKEEKLPNAXXXXXXXXXXXPPPRRPRSRSLLTGPGRVGEIVTRGPHLMTGYWQRPEATAAVLIYPSPPLPTSLPPPASDAARVRDEEGLEGGKEGGPDNQGQMPLERGGRGIGRDGGGPWLRTGDLGMMDKEGNLHLVGRLADVIRSGGEKIMAAEVERVLLEHPSVAGVAVVGLPDRIYGERVVAVVVSRSREGGREKELQAHCRKFLAGYKVPKEVVFRDVLPVTGSGKVRKAVL 828
            L S+  +  G   + P+L   A A MPR  FVQ Y  +E   SI+ L     R  +   S       G+A   +E  I++  A+D E  +                             G +GEIV RG  +MTGYW RPE +A                           E L GG                           W+ TGD+G MD+ G +H+V RL D+I +GGE + + EVE VL +HP+VA  AVVG PD  +GERV AVVV+RS      +E+ AHCR  LA YK P+ V FR  LP++ +GK+ KA L
Sbjct:  266 LTSVERIYYGAAPMPPALMDRAIAAMPRVGFVQGYGMTETSGSISLLKPADHRDPARRRS------AGRAVMAIEARIVD--ADDNEVPV-----------------------------GEIGEIVARGEAVMTGYWNRPEESA---------------------------EALRGG---------------------------WMHTGDVGRMDEHGYIHVVDRLKDMIITGGENVYSVEVEAVLSQHPAVAQCAVVGQPDPHWGERVHAVVVARS--DATAEEVIAHCRDRLAAYKCPRSVEFRRELPLSAAGKILKAAL 494          
The following BLAST results are available for this feature:
BLAST of NO28G01180 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM20879.12.900e-4840.77amp-binding enzyme family protein, partial [Nannoc... [more]
WP_040814776.12.400e-3131.69fatty-acid--CoA ligase [Nocardia concava][more]
WP_088278919.19.200e-3133.54AMP-dependent synthetase [Ideonella sp. A 288][more]
OFX28354.11.200e-3042.65hypothetical protein A2Z07_04050 [Armatimonadetes ... [more]
WP_084023477.11.200e-3041.55hypothetical protein [Mycobacterium avium][more]
WP_084042492.14.600e-3040.58hypothetical protein [Mycobacterium avium][more]
WP_025356675.11.000e-2931.79fatty-acid--CoA ligase [Kutzneria albida] >AHH9654... [more]
WP_087647210.11.300e-2932.72fatty-acid--CoA ligase [Caballeronia choica] >SAL7... [more]
WP_062801065.11.700e-2932.33acyl-CoA synthetase [Cupriavidus nantongensis] >AM... [more]
WP_077145656.11.700e-2933.85hypothetical protein [Sphingopyxis sp. KK2][more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL059nonsL059Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR065ncniR065Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR094ngnoR094Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK004923NSK004923Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO28G01180.1NO28G01180.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|609313gene_9847Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100713g1gene9538Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO28G01180.1NO28G01180.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO28G01180 ID=NO28G01180|Name=NO28G01180|organism=Nannochloropsis oceanica|type=gene|length=2889bp
CCTGTTCGCTATTGCCGGTTTGGACAGCATTAATACTGCACCCTCTCCCC
ATCCCAAAACATAGATTGTTATGGTGCCAAGGAGAAGAAGTTGGAAGTAA
TTATATTCTACTTCAGTGCATCCTCGCTCCCCTTTGCCATCGACGAACGA
GCACGGCTTTTCTTGCCACCCTCCTCGCCCCGACCTCCCCACCCCACAAA
CCAAGCGTAAACATGGCCACCTCCGTCTCTCACGCCCTCGTCCGCGCTGC
GCAAATCAATTCACGAGGCGCTGCTACCGTTACTTACCACGGGCTGGGAC
TGGCCCCAACCATCACCACCTACGCCGAGCTCCGAATGCGCACGACCCGC
GTTGCCCAAGCCCTGCACCACCACCTCTCTCAACAAGGCACCCACAAATT
GCCTTTGAAGAAAGGAGGGAGGCTGGCCTTCCTATGCCGGAACCACGAAC
TGTTTCTGACTTACTTGTTTGCAGCCTCTGATATGGGGCTAGTGGCCGTG
CCGTTGAACACTCGGTGGGGAAGCATTGAAATTGCTGCGGCGTTGATGGA
CTGTCAGCCTGCAGTCGTCGTGTGCGATGCGGACTTATGGCCGTTACTGA
AGGCAAGCTTAATGATGATGCATGATAGTGCTACTGCTGATGATGGAGGG
GATGAGGCGAGAGGGAAAGAGAGTGGAAGGGTACAGCAGCCGCAGCAGCT
GCAGCAGCAGGAAGAGGAGGGTCGACCAGTGCGGACCATTATTCTACTCT
ATACAACAAGCGACAACGACAAGGACGAGGCCAGCAGCAGCAAATCTGTC
TCTTCGCAGGCCCATCTTCTGCCCCCGTTAATCACGCACGAAGCCCTCCT
GAGTCCCTTCTCCTCCTTCCCCTCCTCCTCCTTCCCCTCCTCCCTCCCGC
CCTCCACCCGTGGCCACCACCACGACGCCCACTGCATAATCTACACGTCC
GGAAGCACCGGAGAGCCAAAGGGTGTAGTGCTATCCCACACCGCACAAAT
GACACAAGCATTGGAAAAAATCTCCCTAGGACGCTACTCCCCCAGCAAGG
ACCCCTTCCCTCCTTCCTCTCCTCCCTCCCCCCCTCCCTCCCTTCCCATC
CCCTTCCCTCCCTATCTGACGCGAGGGGTAGGTGAGAATGTTGAGAAAGA
AAAGAAGGCGAAAGAGAAAGAGATAAGGGAGGATAGGGGTACGGTTTATC
TGAGCTTGCCTCCTTTGTTCCATGTGGCAGGTCTGAATACCTCGATTGCC
GTCACGTTGGCGGGGGGGACGCATGTCTTCTTATCGTCTCCTCCTCCTTC
TCGTCGATCTCCTCCTCCTTCTCCTCCTCCTTCTCCTCCTCAGCACCAGC
ATCAGCACCAGCACCAACACCAACACAGGTCGCAGGGACAAAAAAGTCAC
GCAGCGGTTGACGACAGCAGCAGCAACAACAACATAAGCAGCAACACCAC
CACGATCAACAATTGCGACTGCGGCAGGAGCAGCAGGAGCAGCAGCAGCA
GCAGTAGTTTAATCCCCGGCCTCGGATCTACACTGTTGGCCCTTGAAGCA
ATCAAAGAGCTGCGCGTCAACACCTTAGTTGTGGTCCCCACCACGCTCGC
CAGCCTTGTCGCCGCCCAACAAGCAGCAGCAGCAGCAGCAGCAGCAGCAG
CAGCAGCAGCAGCAGCAGCAGCAGCAGCCGCAATACGACAAACACCTTTT
CAACTCGGCAACAACTCCAACAGCATTCTGCCCTCTCTCAGATTCGTCCT
CGTCGGCGGCCAAGCCCTCCTTCCCTCCCTCCATCTCGCCGCCTCCGCCC
TCATGCCCCGCGCCTGCTTCGTCCAATCTTACGCTTGCTCCGAGGCCTGC
TCAAGCATCACGTTCCTGTCCCTCCCTCCCCCCCGCCCTTCCTCCCTCCC
TCTGTCATACCCGCCTTCAGGCTGTGTGGGACAGGCGGCCCATCCCGTGG
AAGTCGCAATTTTGGAGGCTTTTGCCGAGGATAAGGAGGAGAAGCTCCCC
AACGCTCTCCCCTTGCCTACGCCATTGCCTTCTCTGCATCCTCCTCCTCG
TCGCCCTCGGTCACGCTCTTTGCTGACAGGGCCGGGGAGAGTGGGTGAAA
TCGTCACGCGTGGCCCCCACCTGATGACGGGCTATTGGCAGCGGCCTGAA
GCCACGGCAGCGGTGTTGATCTATCCTTCCCCCCCCCTTCCCACCTCCCT
CCCTCCTCCTGCTTCTGATGCGGCTCGTGTGAGAGATGAGGAAGGATTGG
AGGGAGGGAAGGAGGGTGGACCAGACAATCAAGGGCAGATGCCACTCGAA
AGAGGAGGTCGAGGAATAGGAAGGGACGGAGGAGGACCCTGGCTGCGTAC
CGGTGACTTGGGCATGATGGATAAAGAGGGAAATTTGCATCTAGTAGGAC
GCTTGGCGGACGTCATCCGCTCGGGCGGAGAGAAGATCATGGCCGCGGAA
GTCGAAAGGGTCTTGTTAGAGCATCCTTCGGTGGCAGGAGTGGCGGTCGT
AGGGCTACCGGATCGGATATATGGAGAGAGGGTAGTAGCGGTGGTGGTGT
CCAGGAGTAGGGAGGGAGGGAGGGAAAAAGAGTTGCAGGCTCATTGCCGG
AAATTTTTGGCGGGGTACAAGGTGCCGAAAGAGGTGGTGTTCAGAGATGT
ATTGCCTGTGACGGGGAGTGGGAAGGTGAGAAAGGCAGTTCTAGCCAAGG
AGTTGTCGGTCAAAGCACAAGAGGAGGAGAGGAAGGAGAACCGTCGATCG
TTTCTGTAGAGGGGGGTGATTGATATGCGAGGCGAGAAACAAAGAAAGAA
TAGGAGCGTCATTGGCATGCAATAAAAGTTAAATAAAATCGTGTAATGAA
GGGATATAAACTTCGCTAGATGGCAAAAGGGTCCAGCTT
back to top

protein sequence of NO28G01180.1

>NO28G01180.1-protein ID=NO28G01180.1-protein|Name=NO28G01180.1|organism=Nannochloropsis oceanica|type=polypeptide|length=849bp
MATSVSHALVRAAQINSRGAATVTYHGLGLAPTITTYAELRMRTTRVAQA
LHHHLSQQGTHKLPLKKGGRLAFLCRNHELFLTYLFAASDMGLVAVPLNT
RWGSIEIAAALMDCQPAVVVCDADLWPLLKASLMMMHDSATADDGGDEAR
GKESGRVQQPQQLQQQEEEGRPVRTIILLYTTSDNDKDEASSSKSVSSQA
HLLPPLITHEALLSPFSSFPSSSFPSSLPPSTRGHHHDAHCIIYTSGSTG
EPKGVVLSHTAQMTQALEKISLGRYSPSKDPFPPSSPPSPPPSLPIPFPP
YLTRGVGENVEKEKKAKEKEIREDRGTVYLSLPPLFHVAGLNTSIAVTLA
GGTHVFLSSPPPSRRSPPPSPPPSPPQHQHQHQHQHQHRSQGQKSHAAVD
DSSSNNNISSNTTTINNCDCGRSSRSSSSSSSLIPGLGSTLLALEAIKEL
RVNTLVVVPTTLASLVAAQQAAAAAAAAAAAAAAAAAAAAIRQTPFQLGN
NSNSILPSLRFVLVGGQALLPSLHLAASALMPRACFVQSYACSEACSSIT
FLSLPPPRPSSLPLSYPPSGCVGQAAHPVEVAILEAFAEDKEEKLPNALP
LPTPLPSLHPPPRRPRSRSLLTGPGRVGEIVTRGPHLMTGYWQRPEATAA
VLIYPSPPLPTSLPPPASDAARVRDEEGLEGGKEGGPDNQGQMPLERGGR
GIGRDGGGPWLRTGDLGMMDKEGNLHLVGRLADVIRSGGEKIMAAEVERV
LLEHPSVAGVAVVGLPDRIYGERVVAVVVSRSREGGREKELQAHCRKFLA
GYKVPKEVVFRDVLPVTGSGKVRKAVLAKELSVKAQEEERKENRRSFL*
back to top
Synonyms
Publications