NO28G01170, NO28G01170 (gene) Nannochloropsis oceanica

Overview
NameNO28G01170
Unique NameNO28G01170
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length5644
Alignment locationchr28:361811..367454 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr28genomechr28:361811..367454 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO28G01170 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL059nonsL059Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR065ncniR065Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR094ngnoR094Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO28G01170.1NO28G01170.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|314102gene_9846Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO28G01170.1NO28G01170.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO28G01170 ID=NO28G01170|Name=NO28G01170|organism=Nannochloropsis oceanica|type=gene|length=5644bp
ATTGTCTCGCATGTGAAAAAAATTGCACCGTCACTTCATGTATTGTAATA
TCCTCCAATCAAGATGTCCAACTATCAAAGCAAAAAGACTTTATGCTTCC
TTGCTTCGCCAACTTCTCCGAAAAAATCAAAAACCACCGAACGCCGCCAA
AGCCCTTACCAACCACCCCCAACAAACTCAATAAACCTCAATAGCATGAC
CATTGGCCGGTCTCATGGCCGCAGTGGCGGTGCTCCACGCGCATCAGAGC
AGGAGGAGGAGGATCAAGACCCCTTTGCAGCACCGACCAGAGGCTCGGCC
TCGACCTCACTGATCATGCCAAGCACCAGGAGCAAAAACCCTGTACGACA
CCGCACCTCTTCATCCGAACCCGACGCCGTCGCCGCTGCTTACAAAAAGG
AGAAAGCCGCGATGCAAGCCCGCCTGCAAAAGCGAGTGACCGCAGCAGTG
TCCGCAGCAGCGGCAGCTGCAGCTGCCGTCCAAGCGACCAGCAGCAGCCG
AGGGGTCAGCACCGGTAGCAGCGACAGCACCACCGCGAGAAGGAGGGCAA
GTGGTGGACGGAGCGTGGAAGGGGGGACAATTGACCTGGATTTAAGTCTG
CTGTCTTCACCAACAACATTTTCTTCTTCCCCTCCATCATATCCCCCATC
TCCATCTTCTATTTCTTCTTACTCTTCTCTCCAAGCACCTGCTACGGCGG
CGGCAGGGGCAACAGCGAGCTGCAGGAGCAGCAGTAGAATTAGAAGAGGA
GGAGGAAATGGAAGAGAGACAGAAGAGCGCCGGACGGCGGCTGTACGTAA
TTATGGACACGGTTTCGACAATCAGGAAGGACGGCTTGAGGACACTAACG
AAGAAATGAGGGAGGGCGGGGAGGAGGGGAGAGACGACGAAGAAGTAGTA
GAAGACGAACGCAGCCCTCACCAGGGAGAGTCGTTGTCTTCCGCTTCTTC
TCTGTGGTGGCCGTTACCGGTACCGGACGCGGGCGCTCATGACATGGAGC
GAAGAGAGCAGTCATTGGGGGTCCTCGGCGCGGTCTTATCGGACATCCAC
CGCAGGCATGATTTGTACCGTTGCGCTGCTGCTGCTGCTACTGCTACTGC
TGCTTCTACTCCGACGACCAGCGCTGCTGCTGCCCCTGCAGGTACTGCTT
CTTCTTCTGCCGATACAACTGCTGCTGCTGACGTTGCAGTGGAGGGAGGC
AGTGAAGGGAGGACATGGGTTTTACAAGCAGCCATACGCGAGAACGAAGA
AAACATCGAAAAATTGGAGGAGGCGCTGAGGAAGAAGAGGTTAGCGGCGG
AGGCGACAGCGATGATGGTAACCGAGCTAGAGACGGCCTTACAGgtacga
taggactttgactccctccccgaccccccctccgcccctccctccgtctt
ttccccattcgtgcaggctggacggagacgctcggcacgtgatggtatta
tgatgttactaccgttgctcccgaaagtaattggatgccgaagctattac
agccgttcctgctgaaaggagaaggcggaaacggagagccccacatctgt
actcaccctccccccctccccccctccctccttccctccctccttcccag
AACCAGGAGGCCGCGACCGAGAGTAACGGCAGTTGCACCGCCGAGCTATG
GCAGTCCCTCCATGTCGAGGAGGAGGAAGGGCTGGTGTTGCGCGAGAGGA
TAAAGAGTCTCGAAGATCAGGTGAGGGTAATGAAGCAGGCGCTGGAGGAG
GAGAGGGAGCGAGGGAGCCGGGGGTGGGAGGAGGCCGAGCAGCAGCAGCG
GAGAGTTGGTGAGATGGAAGAACAGCTAGACATGAAGATGCAGGCACAGG
GGGAGGAAAGAGAGCGAGAGAGAGAGGGATGGAAAGAGGAGATGGCGCAG
CTGCAGGAGCGAATGGAAGGGTGGAGGCTGCAGGTGGTGGAGGAACAGGA
GAAGAGGAGGAGGGAGGTGGAGGAGGAGAGAGAGAGAGGGAGGGCAGCTT
TGGCGGAGGCAGCGGAAGAGCACCAGCAGCAGCTGGAGGCAGAGAGAGAG
GAAGGGAGGGAGGAGCTTCGTCAGAAGGTGGACGATATAAGGGCTGCATT
GTTGGTAGCGGAGGAAGGGAAGGAGGAAGGGGAGGCAGCGCTGTTGGCAC
TGAGGAGGGAGGTGGAGGAAAAGAGGGAGGAATCGGAGTGGCTGAAGCGA
GCGCTGGCGGAGAAGGAGGAAGAGGTGGAGGGAGGGAGGGAAGAGCAGGC
ACGGCTGAAGGGGGCAATGCTGCTGATGCAGGGGGAGGTGGAGGAAGGGA
GGGAGGAAGGGGAGAGGCTGCGGCGGGAGCTGTCGTCGCTTCAACTTAAA
TTGGAGGAGGCGAAAAGGGAGGGAGAGGAGGCTTATCACACAGCAGCAGC
AGCAGCAGCAGCTGTGGAGGTAACAGAAGAAAAAGTGCGTGTGCTAGAGG
AGGAAGTGAGGGAGGGCAAGCAGGCGCTCGCTGCAGCAGGAGCAGCAGCA
GGAGAAGCGGCAGCAGCGGCAGCAGCAGAGGGAGAAGAGAAGATCGGATC
TCTGGCGAAGGTTCTGGAAGAGACTAGGCAGGAGGTAGTGCGGTTGGAGA
AGCAGGTGGAGGAAGGGAGGGAGGAAGGGAGGGAGGAAGTGACACGGCTC
ATGAAGGAAGTGGAAGAAGCGAGGGAGGAAGGGAGGGAGGAAGGGAGGGA
GGAAGGGAGGGAGGAAGTGACACGGCTCATGAAGGAAGTGGAAAAAGCGA
GGGAGGAAGGGAGGGAGGAAGGGAGGGAGGAGGGGAGGGAGGAAGTGACA
CGGCTCATGAAGGAAGTGGAAGAAGCGAGGGAGGAAGGGAGGGAGGAAGG
GAGGGAGGAAGGGCGGGAGGAAGCGGCACGGCTCATGAAGGAAGTGGAAA
AAGCGAGGGAGGAAGGGAGGGAGGAAGGGAGGGAGGAGGGGAGGGAGGAA
GTGGAACGCCTGATGAAGAGGATGGAGGAAATAAAGGAGGAAGCGAGGGA
GGAAGGGAGGGAGGAAGGGAGGGAGGAAGGGAGGGAGGAAGTGGAACGCC
TGATGAAGAGGATGGAGGAAATAAGGGAGGAAGGGAGGGAGGAAGGGAGG
GAGGAAGGGAGGGAGGAAGGGAGGGAGGAAGTGACACGGCTCATGAAGGA
AGTGGAAGAAGCGAGGGAGGAAGGGAGGGAGGAAGGGAGGGAGGAAGGGA
TGGAGGAAGCGGCACGCCTGATGAAGAGGATGGAGGAAATAAAGGAGGAA
GGAAGGGACGAAGGGAGGGAGGAAGGGAGGGAGGAGGAAGCAGCCAAGTG
GGAGGAGAAGATCCAAGAAGCTCAAGCTGCAGGTGAGGTTGCAAGGGAGG
AAGGGAGGGAGGAAGGGAGGGAGGAAGGGCGGGAGGAAGTAGAACGCCTG
ATGAAGAGGATGGAGGAAATAAAGGAGGATGGAAGGGAAGAAGGGAGGGA
AGAGGAGCGCGCAATAGCCGCGGCAGCCGCAGAAGCAACGGCAAAAGCCC
TAGCGAAACGGGAGGAGGAAGGGAGGGAGGAAGGGAGGGAGGAAGGGAGG
CAGGAAGTGCGAGTGGTCGCAACAGCCGCAGCAGAAGCAGCGGCGCAAGC
GTGGACTGAGAGGGAGGAGGAATGGCAAAGGGAAGTGCAGCGTGTACAGG
AGGAGAAGAAGAGATGGGAGGAGAAGGTTCAGAGGGCGAGGGAGGGAGGG
AGGGAGGAAGGGAGGGAGAAAGGGAGGGAGGAAGGGAAGGAGGAGACAGT
GGTGCTAAGGAGGGAAATCGAGCAGTTGAGGGAGGTGGTGGTGGAGGGAA
GGAGGAAGGAGAGGGAAAGTCTCTATACGTCTCAGCAGGAGAAGACGGCG
GCGGCTCTGCAGGAACAGGTGAAAGAGATGGAAGGGAAGATGGAGAGGCT
GAGGGAGGAAGGGAGGGAGGAGGTGGCGCTATTGAAGATGGAAGTGGAGG
GGCTGAGGGAGGAAGGGGGTCAGGACCGGGAGGAGGTAGCGAGGTTAATC
AGAGTGGTGGAAGAGAAGGAGGAGGAGGCAGAGGGTCTTCGACAAGCAGC
AGCAGCAGCTGCAGCAGCAGCAGGAGGCGGAGACGGAGGAGGCGGAGGAG
GACAAATTGGCATGGAGGAGAGCGAGCAGCAGGAGCAGCAGGAGCAGCAG
GAGCAGGAGCAGCAGGAGCATGAGCAGCTAAACGAACGAGCAGCAGCAGC
AGCAGCTGTGGAAGCAATGGAAGAGAAAGTGCGTGCGCTGGAGGAGGAAG
TGAGGAGTGGCAAGCAGGCGCTCGCTGCAGCAGAAGCAGCAGCAGCGGCA
GCGACAACAATAACAGCCACAGCAGCAGCAGGAGGAGGAGGAGGAGGAGG
AGAGGACGAGGGGGAGGGGGAGAGGAGGACGGTGGTAACAACTCCCTTTC
CTTCCTTCCTTAGCAGACACAACAACAGCTGCTGCTGCAGCTGCAATGAC
GGAGGCGAGGAAGGGAAGGAGGACAAGGGTGGAGGGCAAGAAGGGAAGCA
AGCCCTACTCCCTCGTGACGAGTCCACGTTGGCCGGCGTCTTCCTCTCCC
TCTTCCTCACACACCAACAGCTCCACAGGGAACTGTCCGACCTCCTCTCT
TCTTCCTCCTCTTCTACTTCTTTGTCTTCCTCTGTAGTCACGTCGGCGCC
TCAGAGGCAGCAGGAGCAGGAGCAGGAGCAGGAGCAACGGCAGGAGGGGG
AGGAGGAGGAGGAGGAAGAGGAGGGAGAGGAGACAAGGAGAGAAGCTGTG
GACTCGCTTCGTCTGCGCTTGGAATTGTTGGATGCGAAGAAGAGAAGATT
TGCCAAACGCCTCCAGATGGCCGAAGAAAGATTCAGgtgcggaaagaaga
agggagggagggagggagggagggagggagggagggatggtaggagggag
ggcttagcaagcgcctggtttgttggtcatgcgtcgttatgcgtcctcac
ctcacccattctacctaacctccgctctctgctcctcagGTCCATGACCG
AGCGCAACCACGGCCTGCAGACGGACATCACGTCCCAAAGAGGCCGCATC
CTCCAGCTGCAAACCGAGAAAGAGGAGCTCGAGGAGAAGAAGCAGCAGCT
TGTAGTCCTCTTCTCTGTGGCGGTGGTCCTGGGATTAACGGCTCCCGTTA
CTCGAGCGGTTGTGTGGGCCTTGGCTGAAGCCCCCGTCTGGCAAGGCTAC
CCTCAAGCAAACTGTATGTAAGCACCCCTCCCTCCCTTCCCCCCTCCCTC
CCTCCCTCCCTCTCTCTCTCTCCCTCCTTTCTGTCCATTCTCGCCTCGGT
TATGGCAAAACTACCCTGCGACACTCATCCCAAAAAAGAGGGAGGGAGAG
CGGGATAGAGAGGGAAGAAACAGAGGGAAGGGCAAGTATCGAGTAAAAGT
TGTAAATTATTTGACGAGATGTGTGGTGGTGAAGAGGGAGGGAGGGGGGG
AAGGGGAGGGAAGAAAAGACAATTCTAAAGTAATGTAACAAACATGAAAA
TCAAGTGAAAGAGGAGACCTCAAAATTCGATGGAAAAGAGGACGGAGAAA
GAGTACGGACCGTGAAGGTGAGCGAGGAAGAGAGTGCGATGGTGAGAGGA
ATGGCGGATGCTGACACCTTCGACAAAACCAAACCAACAAGCCA
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protein sequence of NO28G01170.1

>NO28G01170.1-protein ID=NO28G01170.1-protein|Name=NO28G01170.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1583bp
MSNYQSKKTLCFLASPTSPKKSKTTERRQSPYQPPPTNSINLNSMTIGRS
HGRSGGAPRASEQEEEDQDPFAAPTRGSASTSLIMPSTRSKNPVRHRTSS
SEPDAVAAAYKKEKAAMQARLQKRVTAAVSAAAAAAAAVQATSSSRGVST
GSSDSTTARRRASGGRSVEGGTIDLDLSLLSSPTTFSSSPPSYPPSPSSI
SSYSSLQAPATAAAGATASCRSSSRIRRGGGNGRETEERRTAAVRNYGHG
FDNQEGRLEDTNEEMREGGEEGRDDEEVVEDERSPHQGESLSSASSLWWP
LPVPDAGAHDMERREQSLGVLGAVLSDIHRRHDLYRCAAAAATATAASTP
TTSAAAAPAGTASSSADTTAAADVAVEGGSEGRTWVLQAAIRENEENIEK
LEEALRKKRLAAEATAMMVTELETALQNQEAATESNGSCTAELWQSLHVE
EEEGLVLRERIKSLEDQVRVMKQALEEERERGSRGWEEAEQQQRRVGEME
EQLDMKMQAQGEEREREREGWKEEMAQLQERMEGWRLQVVEEQEKRRREV
EEERERGRAALAEAAEEHQQQLEAEREEGREELRQKVDDIRAALLVAEEG
KEEGEAALLALRREVEEKREESEWLKRALAEKEEEVEGGREEQARLKGAM
LLMQGEVEEGREEGERLRRELSSLQLKLEEAKREGEEAYHTAAAAAAAVE
VTEEKVRVLEEEVREGKQALAAAGAAAGEAAAAAAAEGEEKIGSLAKVLE
ETRQEVVRLEKQVEEGREEGREEVTRLMKEVEEAREEGREEGREEGREEV
TRLMKEVEKAREEGREEGREEGREEVTRLMKEVEEAREEGREEGREEGRE
EAARLMKEVEKAREEGREEGREEGREEVERLMKRMEEIKEEAREEGREEG
REEGREEVERLMKRMEEIREEGREEGREEGREEGREEVTRLMKEVEEARE
EGREEGREEGMEEAARLMKRMEEIKEEGRDEGREEGREEEAAKWEEKIQE
AQAAGEVAREEGREEGREEGREEVERLMKRMEEIKEDGREEGREEERAIA
AAAAEATAKALAKREEEGREEGREEGRQEVRVVATAAAEAAAQAWTEREE
EWQREVQRVQEEKKRWEEKVQRAREGGREEGREKGREEGKEETVVLRREI
EQLREVVVEGRRKERESLYTSQQEKTAAALQEQVKEMEGKMERLREEGRE
EVALLKMEVEGLREEGGQDREEVARLIRVVEEKEEEAEGLRQAAAAAAAA
AGGGDGGGGGGQIGMEESEQQEQQEQQEQEQQEHEQLNERAAAAAAVEAM
EEKVRALEEEVRSGKQALAAAEAAAAAATTITATAAAGGGGGGGEDEGEG
ERRTVVTTPFPSFLSRHNNSCCCSCNDGGEEGKEDKGGGQEGKQALLPRD
ESTLAGVFLSLFLTHQQLHRELSDLLSSSSSSTSLSSSVVTSAPQRQQEQ
EQEQEQRQEGEEEEEEEEGEETRREAVDSLRLRLELLDAKKRRFAKRLQM
AEERFRSMTERNHGLQTDITSQRGRILQLQTEKEELEEKKQQLVVLFSVA
VVLGLTAPVTRAVVWALAEAPVWQGYPQANCM*
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Synonyms
Publications