NO28G01080, NO28G01080 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of NO28G01080 vs. NCBI_GenBank
Match: EWM20891.1 (hypothetical protein Naga_100201g8 [Nannochloropsis gaditana]) HSP 1 Score: 289.7 bits (740), Expect = 4.600e-74 Identity = 170/297 (57.24%), Postives = 211/297 (71.04%), Query Frame = 0 Query: 891 KAKEQGMAGMQEQVAELEEALAAARTAAAEVESENKNRIQELQTRLQQAEHSAHERGAQLAAARADLGVLGRDFEQSETAKNNLQKVLEQFQWEKTKELKQMENARAKQRAAEEAAAQTRLEHLRKAMQGQVDDAQAQALLAAESADRDKIKTKALIDQAKKESLSLRRALDEAISRLHNNESDVVPRQLIGNLLVSYYSQGRPKETLEIIARTLVFKDADRVKVGLKALKP----EAEGLEGGSPEVRGTRGWLGGLLSRVEGAISSPRKAYVPEDGVLEGKSLGDLWMDYLMNET 1184 +A+E + ++E+VA + +A A E E++N+++ L RLQ AEH+ HE+GA+LA RADLGVL RDFEQSETAK NLQKVLEQFQ EK E+K E AKQ AA R HLR + Q Q+ DAQAQA L+ E ++R+ K A QA++E+ S+R+ALDEAI+RLH+NESDVVPRQLIGNL+VSYYSQGRP ETLEIIARTL D +R+KVGL+AL+P A EGG G RG +GGL SRV G +SSPRK +VPE+G EGK+LGDLW+DYLM ET Sbjct: 413 RAQEADLEALREEVAVWKARVATMEANAVRQEEESENKVRGLLERLQAAEHAVHEQGAELAGTRADLGVLTRDFEQSETAKANLQKVLEQFQREKAAEMKHWERTHAKQLAAXXXXXXXREAHLRTSFQAQIADAQAQATLSVEESERETRKALAECQQARREAASMRKALDEAIARLHSNESDVVPRQLIGNLVVSYYSQGRPTETLEIIARTLGLADEERIKVGLRALRPGGGRRAGVGEGGGAGSPGKRGLVGGLFSRVGGVMSSPRKEFVPENGT-EGKTLGDLWLDYLMKET 708
BLAST of NO28G01080 vs. NCBI_GenBank
Match: XP_002293396.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED89132.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 92.8 bits (229), Expect = 8.300e-15 Identity = 82/291 (28.18%), Postives = 145/291 (49.83%), Query Frame = 0 Query: 897 MAGMQEQVAELEEALAAARTAAAEVESENKNRIQELQTRLQQAEHSAHERGAQLAAARADLGVLGRDFEQSETAKNNLQKVLEQFQWEKTKELKQMENARAKQRAAEEAAAQTRLEHLRKAMQGQVDDAQAQALLAAESADRDKIKTKALIDQAKKESLSLRRALDEAISRLHNNESDVVPRQLIGNLLVSYYS-QGRPKETLEIIARTLVFKDADRVKVGLKALKPEAEGLEGGSPEVRGTRGWLGGLLSRVEGAISSPRKAYVPEDGVLEGKSLGDLWMDYLMNETEEE 1187 + G++ ++ LEE + + ++ + A+ A + QLAAA AD+ + D ++ A NLQ+ LE FQ E+ E+ + R A EAA LE +R+A ++ D Q A + +++ + K +A I + +K +L+LRRALDEAISRL ++ DV+ R LI N+++ +++ +G+ K+ + I+ +++ D K +A EG G + R+ GA+++P LEG S+ + W+++L+ ET EE Sbjct: 668 VGGLKMELQLLEEERQREKEFLQSAAEKTSGNYVQVVSERDAAKAKARDLEQQLAAAHADVELANTDRNRALMANENLQRALEDFQSERDAEIALLMEQRTADEEAIEAAHNASLEAMREANAAEIRDIQYAANKSVQNSLVEIDKMEATIQECRKNNLNLRRALDEAISRLQTSQEDVIDRSLIKNIILDWHAKKGKAKQDVMILLGSILHFTEDE--------KDKAFISEG------------PGTVDRIVGAVAAPLPPSKLNVDKLEGDSVREKWVNFLLAETGEE 938
BLAST of NO28G01080 vs. NCBI_GenBank
Match: EJK46883.1 (hypothetical protein THAOC_34430 [Thalassiosira oceanica]) HSP 1 Score: 88.6 bits (218), Expect = 1.600e-13 Identity = 80/293 (27.30%), Postives = 146/293 (49.83%), Query Frame = 0 Query: 897 MAGMQEQVAELEEALAAARTAAAEVESENKNRIQELQTRLQQAEHSAHERGAQLAAARADLGVLGRDFEQSETAKNNLQKVLEQFQWEKTKELKQMENARAKQRAAEEAAAQTRLEHLRKAMQGQVDDAQ--AQALLAAESADRDKIKTKALIDQAKKESLSLRRALDEAISRLHNNESDVVPRQLIGNLLVSYY-SQGRPKETLEIIARTLVFKDADRVKVGLKALKPEAEGLEGGSPEVRGTRGWLGGLLSRVEGAISSPRKAYVPEDGVLEGKSLGDLWMDYLMNETEEE 1187 + G++ ++ LEE R+A + + ++ A + QL AARADL + D +++ TA +NL LE FQ E+ E+ + R A +AA Q LE +++A Q+ D Q A + + A+ D+++T L + ++ES +LR+ALDEAI+RL ++ DV+ R LI N+++ ++ +G+ K + I+ +++ + D + + L G P G L +V A+++P +EG+++ D W+ +LM ET ++ Sbjct: 555 LGGLKMELQMLEEERLRERSALESAQDKTSEDYAQVLNERDAANATVRNLEQQLVAARADLELAHTDRDRAVTANDNLTMALEAFQSERESEISLLTEQRIADEEAVKAAHQASLEAMKEANAAQMRDVQYAADKSVQNQLAEMDRMETDLL--ECRRESSNLRKALDEAIARLQTSQEDVIDRNLIKNVILDWHGKRGKEKRDVMILLGSILNFNEDE----------KDKALIGEGP----------GALHKVYDAVAAPLPPAKLNVDKIEGETVRDKWVSFLMAETGDD 825
BLAST of NO28G01080 vs. NCBI_GenBank
Match: OEU07910.1 (hypothetical protein FRACYDRAFT_264790 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 79.3 bits (194), Expect = 9.500e-11 Identity = 80/309 (25.89%), Postives = 149/309 (48.22%), Query Frame = 0 Query: 891 KAKEQGMAGMQEQVAELEE-----------ALAAARTAAAEVESENKNRIQELQTRLQQAEHSAHERGAQLAAARADLGVLGRDFEQSETAKNNLQKVLEQFQWEKTKELKQMENARAKQRAAEEAAAQTRLEHLRKAMQGQVDDAQAQALLAAESADRDKIKTKALIDQAKKESLSLRRALDEAISRLHNNESDVVPRQLIGNLLVSYYS---QGRPKETLEIIARTLVFKDADRVKVGLKALKPEAEGLEGGSPEVRGTRGWLGGLLSRVEGAISSPRKAYVPEDGVLEGKSLGDLWMDYLMNETEE 1186 K++ + +G++ ++ L+E + +A ++ ++ESE + EL+ Q QLAAA DL + D + TA NNLQ LE FQ E+ E+ ++ R + ++A T L++ + ++ + Q A ++ + + +++ K E +RR+LDEAI RL + + DV+ R ++ N+LV + + Q + ++ L+++A L F + +R KV L S R + G SRV GA+ +P + LEG ++ + W+++LM ET++ Sbjct: 572 KSESENSSGLRMELTMLKEQNNREKSKNNSLVDSAMSSRTQIESERDTALSELRDAKQ-----------QLAAALGDLEISRADNTRIMTANNNLQSALEAFQDERQAEMGMIDEQRREAEEGVKSAHATATSALKQIHEAEMYEIQKAGDKAVKNLMHEMELLENDMEKLKSEKNQMRRSLDEAIHRLQSTQEDVIDRNMMKNILVDWCTLNDQNKREQILQLMANLLHFSEDEREKVHLT------------STSHRNSVG------SRVVGALRAPLPPSKADIEHLEGSNVREKWINFLMAETDD 851
BLAST of NO28G01080 vs. NCBI_GenBank
Match: CBJ31818.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 77.0 bits (188), Expect = 4.700e-10 Identity = 92/314 (29.30%), Postives = 151/314 (48.09%), Query Frame = 0 Query: 884 ALRAMEFKAKEQGMAGM--QEQVAELEEALAAA--RTAAAEVESENKNRIQELQTRLQQAEHSAHERGAQLAAARADLGVLGRDFEQSETAKNNLQKVLEQFQWEKTKELKQMENARAKQRAAEEAAAQTRLEHLRKAMQGQVDDAQAQALLAAESADRDKIK---TKALID----QAKKESLSLRRALDEAISRLHNNESDVVPRQLIGNLLVSYYSQGRPKETLEIIARTLVFKDADRVKVGLKALKPEAEGLEGGSPEVRGTRGWLGGLLSRVEGAISSPRKAYVPEDGVLEGKSLGDLWMDYLMNETEEE 1187 AL A E +E M E ELE AL R+ + + ++ ++++ Q RL++A H AAA A L + Q E L VLE F EK E++ M R + A++ A+ + L+++ + ++ + QAQ L +RD++K +A+++ + K++ R AL+ A+ RL + D + RQL+ NL+V Y S K+ LE++AR F + ++ +VGL P G+ T ++GG + P +A E G++LGDLW+D+LM ET EE Sbjct: 80 ALSAKESAEQEALSVKMLYSEVQEELERALQETDQRSTSGQEQATLSKQLRQAQARLEEAREDKHXXXXASAAALASSQALHQAALQRE---QQLGGVLEAFHEEKATEVEVMNKRRQEDLASQAASFEATELSLKRSFEARLSE-QAQTL------ERDRLKDRRAEAVLEGENARIKEDLAKSRAALEAALLRLSGSCDDTLDRQLVTNLIVRYVSSHHKKQVLELMARMFNFTEEEKEQVGLSNRGPTLPGML--------TAMFVGG----GQDGDHDP-EAATAEAKASAGEALGDLWVDFLMAETTEE 370
BLAST of NO28G01080 vs. NCBI_GenBank
Match: XP_006375354.1 (golgin candidate 4 isoform X1 [Populus trichocarpa] >PNT03830.1 hypothetical protein POPTR_014G091300v3 [Populus trichocarpa]) HSP 1 Score: 76.6 bits (187), Expect = 6.100e-10 Identity = 81/303 (26.73%), Postives = 147/303 (48.51%), Query Frame = 0 Query: 903 QVAELEEALAAARTAAAEVESENKNRIQELQTRLQQAEHSAHERGAQLAAARADLGVLGRDFEQSETAKNNLQKVLEQFQWE-KTKELKQMENARAKQRAAEEAAAQTRLEHLRKAMQGQVDDAQAQALLAAESAD--RDKIKTKALIDQAKKESLSLRRALDEAISRLHNNESD---VVPRQLIGNLLVSYYSQGRPKETLEIIARTLVFKDADRVKVGLKALKPEAEGLEGGSPEVRGTRGWLGGLLSRVEGAISSPRKAYVPEDGVLEGKSLGDLWMDYLMNETEEEGEGEEGVEEAPPS 1200 Q+ LE+AL A EV N N I Q+++ + +LA + + E NLQ L Q+ E + KE + + A K+ +A+ R + L++A G + + + + A+ +D R + K+ +++ ++++ LRRA+++++SRL+ D +V R+++ LLV+Y+ + KE L+++ R L F D D+ ++G+ +GG VRG GL R+ G I A V + + +S D+W+D+L+ ETEE + E G + P+ Sbjct: 429 QILHLEKALKQAIAGQEEVRMMNSNEI-------QKSKEMTEDLKKKLANCMSTI-------ESKNVELLNLQTALGQYFAEVEAKEYLERQLALTKEESAK------RFQLLKEAEIGTEESKREKEEILAKLSDVERKFAEGKSRVNKLEEDNAKLRRAVEQSVSRLNRMSMDSDYLVDRRIVIKLLVTYFQRNHSKEVLDLMVRMLGFSDEDKQRIGV--------AQQGGKGVVRGVL----GLPGRLVGGILGGSAAGVQMNLASDNQSFADMWVDFLLKETEEREKRESGQDTGRPN 699
BLAST of NO28G01080 vs. NCBI_GenBank
Match: PNT03831.1 (hypothetical protein POPTR_014G091300v3 [Populus trichocarpa]) HSP 1 Score: 76.6 bits (187), Expect = 6.100e-10 Identity = 81/303 (26.73%), Postives = 147/303 (48.51%), Query Frame = 0 Query: 903 QVAELEEALAAARTAAAEVESENKNRIQELQTRLQQAEHSAHERGAQLAAARADLGVLGRDFEQSETAKNNLQKVLEQFQWE-KTKELKQMENARAKQRAAEEAAAQTRLEHLRKAMQGQVDDAQAQALLAAESAD--RDKIKTKALIDQAKKESLSLRRALDEAISRLHNNESD---VVPRQLIGNLLVSYYSQGRPKETLEIIARTLVFKDADRVKVGLKALKPEAEGLEGGSPEVRGTRGWLGGLLSRVEGAISSPRKAYVPEDGVLEGKSLGDLWMDYLMNETEEEGEGEEGVEEAPPS 1200 Q+ LE+AL A EV N N I Q+++ + +LA + + E NLQ L Q+ E + KE + + A K+ +A+ R + L++A G + + + + A+ +D R + K+ +++ ++++ LRRA+++++SRL+ D +V R+++ LLV+Y+ + KE L+++ R L F D D+ ++G+ +GG VRG GL R+ G I A V + + +S D+W+D+L+ ETEE + E G + P+ Sbjct: 430 QILHLEKALKQAIAGQEEVRMMNSNEI-------QKSKEMTEDLKKKLANCMSTI-------ESKNVELLNLQTALGQYFAEVEAKEYLERQLALTKEESAK------RFQLLKEAEIGTEESKREKEEILAKLSDVERKFAEGKSRVNKLEEDNAKLRRAVEQSVSRLNRMSMDSDYLVDRRIVIKLLVTYFQRNHSKEVLDLMVRMLGFSDEDKQRIGV--------AQQGGKGVVRGVL----GLPGRLVGGILGGSAAGVQMNLASDNQSFADMWVDFLLKETEEREKRESGQDTGRPN 700
BLAST of NO28G01080 vs. NCBI_GenBank
Match: XP_024440376.1 (golgin candidate 4 isoform X2 [Populus trichocarpa]) HSP 1 Score: 76.6 bits (187), Expect = 6.100e-10 Identity = 81/303 (26.73%), Postives = 147/303 (48.51%), Query Frame = 0 Query: 903 QVAELEEALAAARTAAAEVESENKNRIQELQTRLQQAEHSAHERGAQLAAARADLGVLGRDFEQSETAKNNLQKVLEQFQWE-KTKELKQMENARAKQRAAEEAAAQTRLEHLRKAMQGQVDDAQAQALLAAESAD--RDKIKTKALIDQAKKESLSLRRALDEAISRLHNNESD---VVPRQLIGNLLVSYYSQGRPKETLEIIARTLVFKDADRVKVGLKALKPEAEGLEGGSPEVRGTRGWLGGLLSRVEGAISSPRKAYVPEDGVLEGKSLGDLWMDYLMNETEEEGEGEEGVEEAPPS 1200 Q+ LE+AL A EV N N I Q+++ + +LA + + E NLQ L Q+ E + KE + + A K+ +A+ R + L++A G + + + + A+ +D R + K+ +++ ++++ LRRA+++++SRL+ D +V R+++ LLV+Y+ + KE L+++ R L F D D+ ++G+ +GG VRG GL R+ G I A V + + +S D+W+D+L+ ETEE + E G + P+ Sbjct: 297 QILHLEKALKQAIAGQEEVRMMNSNEI-------QKSKEMTEDLKKKLANCMSTI-------ESKNVELLNLQTALGQYFAEVEAKEYLERQLALTKEESAK------RFQLLKEAEIGTEESKREKEEILAKLSDVERKFAEGKSRVNKLEEDNAKLRRAVEQSVSRLNRMSMDSDYLVDRRIVIKLLVTYFQRNHSKEVLDLMVRMLGFSDEDKQRIGV--------AQQGGKGVVRGVL----GLPGRLVGGILGGSAAGVQMNLASDNQSFADMWVDFLLKETEEREKRESGQDTGRPN 567
BLAST of NO28G01080 vs. NCBI_GenBank
Match: XP_022757473.1 (golgin candidate 3-like isoform X7 [Durio zibethinus]) HSP 1 Score: 76.3 bits (186), Expect = 8.000e-10 Identity = 72/262 (27.48%), Postives = 127/262 (48.47%), Query Frame = 0 Query: 962 RDFEQSETAKNNLQKVLEQFQWEKTKELKQMENARAKQRAAEEAAAQTRLEHLRKAMQGQVDDAQAQALLAAESADRDK-----------------IKTKALIDQAKKESLSLRRALDEAISRLHNNESD---VVPRQLIGNLLVSYYSQGRPKETLEIIARTLVFKDADRVKVGLKALKPEAEGLEGGSPEVRGTRGWLGGLLSRVEGAISSPRKAYVPEDGVLEGKSLGDLWMDYLMNETEEEGEGEEGVEEAPPSPPDL 1204 R+ E ++ +NL++V+ + E T LK +N + LE R+++ ++D ++ L A E A+ K + K I++ ++++ LRRAL+++++RL+ D +V R+++ LLV+Y+ + KE L+++ R L F D D+ ++G+ G VRG G G L+ + G S+ A + D +S+ DLW+D+L+ ETEE E E E+A S DL Sbjct: 321 RENESADDKHDNLKRVIATLEKENT-HLKMEKN-----------ELEAALESTRRSLTSKIDPNASETLDADEHAELSKREKEEILVKLSQTEKMLAERKTRINKLEEDNGKLRRALEQSMTRLNRMSMDSDYLVDRRIVIKLLVTYFQRNHSKEVLDLMVRMLGFSDEDKQRIGVAQ-------HGAGKGVVRGVLGLPGRLVGGIWGGSSADVHANMASD----NQSIADLWVDFLLKETEER-EKRELAEDASSSREDL 558
BLAST of NO28G01080 vs. NCBI_GenBank
Match: XP_002185991.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >ACI65461.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 75.5 bits (184), Expect = 1.400e-9 Identity = 65/250 (26.00%), Postives = 118/250 (47.20%), Query Frame = 0 Query: 939 AEHSAHERGAQLAAARADLGVLGRDFEQSETAKNNLQKVLEQFQWEKTKELKQMENARAKQRAAEEAAAQTRLEHLRKAMQGQVDDAQAQALLAAESADRDKIKTKALIDQAKKESLSLRRALDEAISRLHNNESDVVPRQLIGNLLVSYYSQGRPKE---TLEIIARTLVFKDADRVKVGLKALKPEAEGLEGGSPEVRGTRGWLGGLLSRVEGAISSPRKAYVPEDGVLEGKSLGDLWMDYLMNETEE 1186 A+ A + QL A ADL V+ D+++ + +NLQ LE FQ E+ E L+ +R+ + ++ + Q A A + + + + + ++Q + +++ +RR+LDEAI RL +N+ DV+ R L+ N+L+ + S+ + KE LE++A L F D ++ KV + G RV ++P + LEG ++ D W+++L+ ETE+ Sbjct: 850 AKAEARDLKQQLVAGLADLEVVRADYDRVILSNSNLQNALESFQNEREAERSIXXXXXXXXXXXXXXXHAAALDAIRQVHEARIHEIQHTADSAVQKSIQQVRELEVKLEQYRIDNVQMRRSLDEAIIRLQSNQEDVIDRSLMKNILLDWLSKTQSKEKRQVLEVMASVLHFSDEEKEKVHITD---------------------QAGRFGRVVETFTAPLPPPKADMQKLEGDNVRDKWVNFLLAETED 1078 The following BLAST results are available for this feature:
BLAST of NO28G01080 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO28G01080 ID=NO28G01080|Name=NO28G01080|organism=Nannochloropsis oceanica|type=gene|length=4136bpback to top protein sequence of NO28G01080.1 >NO28G01080.1-protein ID=NO28G01080.1-protein|Name=NO28G01080.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1293bpback to top Synonyms
Publications
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