NO28G00970, NO28G00970 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO28G00970 vs. NCBI_GenBank
Match: EWM20908.1 (Acyl transferase/acyl hydrolase/lysophospholipase [Nannochloropsis gaditana]) HSP 1 Score: 317.0 bits (811), Expect = 1.100e-82 Identity = 190/382 (49.74%), Postives = 232/382 (60.73%), Query Frame = 0 Query: 134 GLARLVPLGMPSLPRTSSRYKRHLSCTDLDIFREEHQQRQEGEAVLQTLLQLQLNEQRKEVRGIEEQQHLEYNAPALLITSADLPAVIFSPSSRSSGPSAPPRARVKRCLSMPVAPASAPLPFTRSWSTGSSSSRSSGQDELVVNFPGGGKFFYWQSGVATFLNKYFDLTNAKLVGASAGALTATLMACHVDAHYATAIAVKLLRKYNVYKRSLGL--------------------------------------RHHVSDFRSKGDLIETCLASAHLPMVMDGKPFCMWRGWPCVDGSIWAGRRAVPNHLRDAETVTFDYVEDEMLGRGGEGGRREGGKEFMTLEEGEGLRRLVEMGYRFAERMNEGGQLHPAIQRMRRTRS 478 GLA+L+PLGM PRTSSRYKR+LSC D++ E + +E + + + + + G E P +L P + P S P AR++R S+PV P + P +R+ S SSG ELVVNFPGGGKFFYWQSGVATFLN++FDL +AKLVGASAG+LTATLMACHVDAH+AT AV++L +Y VY+R++GL R HV+DF SK DLIETCLASAHLP+VMDGKPF +WRGWPC+DGSI AGRR +P +L DA+ VTFDYVEDE LG KEF+ L + GL RLVEMGYRFAERM+ GG LHPAIQ +RR S Sbjct: 116 GLAQLIPLGM---PRTSSRYKRNLSCADVETLLERERLMEE-DPLFEVVEVPVRSTHMGPTDGPGPPLRTEREEPPVLGQYPGTPFPLECPPLLSY-----PPARIRRAKSLPVEPTTRPPALSRARS-------SSGHGELVVNFPGGGKFFYWQSGVATFLNQHFDLRSAKLVGASAGSLTATLMACHVDAHHATETAVRILHRYKVYERAMGLVGVWGAVVRDWLWEVLPDNAAELCAGRVHISVLCLPYRRCHVTDFASKEDLIETCLASAHLPLVMDGKPFRLWRGWPCMDGSILAGRRDLPANLVDAQQVTFDYVEDEQLGASHT-------KEFIALSDPAGLSRLVEMGYRFAERMSHGGLLHPAIQTLRREDS 474
BLAST of NO28G00970 vs. NCBI_GenBank
Match: XP_011400100.1 (Patatin-like phospholipase domain-containing protein 1 [Auxenochlorella protothecoides] >KFM27133.1 Patatin-like phospholipase domain-containing protein 1 [Auxenochlorella protothecoides]) HSP 1 Score: 116.7 bits (291), Expect = 2.100e-22 Identity = 83/251 (33.07%), Postives = 116/251 (46.22%), Query Frame = 0 Query: 276 VVNFPGGGKFFYWQSGVATFLNKYFDLTNAKLVGASAGALTATLMACHVDAHYATAIAVKLLRKYNVYKRSLGL----------------------RHH------------------VSDFRSKGDLIETCLASAHLPMVMDGKPFCMWRGWPCVDGSIWAGRRAVPNHLRDAE--TVTFDYVEDEMLGRGGEGGRREGGKEFMTLEEGEGLRRLVEMGYRFAERMNEGGQLHPAIQRMRR---TRSTEGG 482 +++ GGG FF+W+ GV +L K FDL ++ GASAGAL +TL+AC VD A A A +R+ +R LGL R H V F SK DL++ LAS H+P DG P ++G PC+DGS+W A + AE V DY +D+ L +F+ L + + LV GYR+A R +E G+ A+ R+RR +R GG Sbjct: 83 IISCCGGGIFFFWELGVLLYLQKQFDLGGVQVRGASAGALLSTLVACDVDLEKALASATVRIRRVEAMERKLGLVGLAGQLVGDWLADLLPEDAAQRAHRRGLHIVVTEVPSFRLTTVKRFDSKQDLVQANLASTHIPFFTDGAPSYDYKGQPCIDGSLWDFVFADNSDYLKAEGRAVLVDYFKDDQLS--------TNRLDFIRLASPDEILSLVGFGYRYASRADEAGEFELALGRLRRSPLSRLVSGG 325
BLAST of NO28G00970 vs. NCBI_GenBank
Match: XP_005851232.1 (hypothetical protein CHLNCDRAFT_137944 [Chlorella variabilis] >EFN59130.1 hypothetical protein CHLNCDRAFT_137944 [Chlorella variabilis]) HSP 1 Score: 110.2 bits (274), Expect = 2.000e-20 Identity = 79/265 (29.81%), Postives = 123/265 (46.42%), Query Frame = 0 Query: 249 PASAPLP--FTRSWSTGSSSSR-------SSGQDELVVNFPGGGKFFYWQSGVATFLNKYFDLTNAKLVGASAGALTATLMACHVDAHYATAIAVKLLRKYNVYKRSLGLR---------------------------------------HHVSDFRSKGDLIETCLASAHLPMVMDGKPFCMWRGWPCVDGSIWAGRRAVPNHL--RDAETVTFDYVEDEMLGRGGEGGRREGGKEFMTLEEGEGLRRLVEMGYRFAERMNEGG 464 P P+P F R+ S + R ++G + +++F GGG FF+W+ G +L++ FDLT +LVGASAG L ATL AC VD A +A +L ++Y V++R GL ++ DF SK DLI+ +ASA +P +DGK C +RG +DGS+W + + L D + DY D+ L + +F+ L + + ++ V GY +A R++ G Sbjct: 40 PLPLPIPGWFRRAESEQEEAPRAPVQVQVAAGSKQPILSFAGGGIFFWWELGCLRYLHRNFDLTKVQLVGASAGGLIATLAACGVDEDKAVRVANRLAQEYGVFERPGGLAGIWGSLIRAWLEELLPEDAAERCAGRVRLVVTEVPSLKLRYLQDFESKQDLIDANMASAFIPFFLDGKATCPYRGRSYIDGSLWDFLLSDNSDLIKCDGKACVVDYFNDDQL--------QWSRLDFIKLADLQQVQAFVGTGYAYAARVDAAG 296
BLAST of NO28G00970 vs. NCBI_GenBank
Match: PRW58356.1 (serine carboxypeptidase-like 21 [Chlorella sorokiniana]) HSP 1 Score: 107.1 bits (266), Expect = 1.700e-19 Identity = 68/225 (30.22%), Postives = 104/225 (46.22%), Query Frame = 0 Query: 276 VVNFPGGGKFFYWQSGVATFLNKYFDLTNAKLVGASAGALTATLMACHVDAHYATAIAVKLLRKYNVYKRSLGLR---------------------------------------HHVSDFRSKGDLIETCLASAHLPMVMDGKPFCMWRGWPCVDGSIW---AGRRAVPNHLRDAETVTFDYVEDEMLGRGGEGGRREGGKEFMTLEEGEGLRRLVEMGYRFAER 459 +++F GGG FF+W+ GV +L++ FDL ++VGASAG L L AC VD A +A +L ++Y V++R GL ++ DF SK DLI+ C+ + H+P +DG +RG P +DGS+W G + D E DY D+ L + G +F+ L + E ++ V+ G +AER Sbjct: 412 ILSFAGGGIFFWWELGVLRYLHRNFDLRGVQMVGASAGGLICALAACGVDEDKAVRVAHRLAQEYGVFERPGGLAGIWGALIREWLDELLPEDAAERCRGRVRLVVTEVPSLRLRYLEDFESKEDLIDACMTTVHIPFFLDGNASRTYRGQPYIDGSLWDFLLGDNSALIKCND-EACVVDYFNDDQL--------KWGRLDFIKLADLEQVQAFVQAGTDYAER 627
BLAST of NO28G00970 vs. NCBI_GenBank
Match: GAX80652.1 (hypothetical protein CEUSTIGMA_g8087.t1 [Chlamydomonas eustigma]) HSP 1 Score: 103.2 bits (256), Expect = 2.500e-18 Identity = 71/235 (30.21%), Postives = 108/235 (45.96%), Query Frame = 0 Query: 273 DELVVNFPGGGKFFYWQSGVATFLNKYFDLTNAKLVGASAGALTATLMACHVDAHYATAIAVKLLRKYNVYKRSLGL---------------------------------------RHHVSDFRSKGDLIETCLASAHLPMVMDGKPFCMWRGWPCVDGS---IWAGRRAVPNHLRDAETVTFDYVEDEMLGRGGEGGRREGGKEFMTLEEGEGLRRLVEMGYRFAERMNEGGQL 466 DE ++ G G +F+WQ G +L + DL+ + GAS G+L A L AC V A A +L ++N++ R +GL + +SDF+ K DLI C+AS H+P+V+D K RG CVDGS + G + R V FDY +D+ L +R+G + + L E + VE+GYR+A+R++ G+L Sbjct: 75 DEPSFSWAGSGLYFFWQLGAMKYLAEQCDLSKVHMTGASGGSLVAVLAACGVSADLILKRAYELSLEFNIWDRPMGLTGIWGGLVEQWLDELLPENAHEMCGGRVTVVVTTLPDMRQVGISDFKDKQDLINACMASCHVPLVLDLKVTRYCRGSECVDGSFPDFFFGNCDLLT--RGGSAVVFDYFDDKEL-------KRQGRMDMLQLTSYERILERVEVGYRYAQRLHTEGRL 300
BLAST of NO28G00970 vs. NCBI_GenBank
Match: PSC68291.1 (serine carboxypeptidase-like 20 [Micractinium conductrix]) HSP 1 Score: 97.4 bits (241), Expect = 1.300e-16 Identity = 63/229 (27.51%), Postives = 104/229 (45.41%), Query Frame = 0 Query: 276 VVNFPGGGKFFYWQSGVATFLNKYFDLTNAKLVGASAGALTATLMACHVDAHYATAIAVKLLRKYNVYKRSLGLR---------------------------------------HHVSDFRSKGDLIETCLASAHLPMVMDGKPFCMWRGWPCVDGSIWAGRRAVPNHLRD--AETVTFDYVEDEMLGRGGEGGRREGGKEFMTLEEGEGLRRLVEMGYRFAERMNEGG 464 +++F GGG +F+W+ G +L++ FDLT +LVGASAG L ATL AC VD A +A ++ V++R GL ++ +F ++ DLI+ +AS H+P +MDG +RG +DGS+W + L + + DY D+ L + + + L + + ++ V+ GY +AER + G Sbjct: 637 ILSFAGGGTYFFWELGCLRYLHRQFDLTKVQLVGASAGGLIATLAACGVDEDRAVRVAYRIAEDNGVFERPGGLAGIWGLLVREWLDELLPEDAAELCAGRVRLVVTEVPSLRIKYLENFATRQDLIDANMASVHIPFIMDGNAATTFRGQQYIDGSLWDFVMGANSDLINCGGDACVIDYFHDDQL--------QWSRLDCLKLCDLQEVQAFVQKGYAYAERTDAKG 857
BLAST of NO28G00970 vs. NCBI_GenBank
Match: PNH11898.1 (Patatin-like phospholipase domain-containing protein 1 [Tetrabaena socialis]) HSP 1 Score: 96.3 bits (238), Expect = 3.000e-16 Identity = 78/269 (29.00%), Postives = 122/269 (45.35%), Query Frame = 0 Query: 237 ARVKRCLSMPVAPASA-PLPFTRSWSTGSSSSRSSGQDELVVNFPGGGKFFYWQSGVATFLNKYFDLTNAKLVGASAGALTATLMACHVDAHYATAIAVKLLRKYNVYKRSLGL---------------------------------------RHHVSDFRSKGDLIETCLASAHLPMVMDGKPFCMWRGWPCVDGSIWAGRRAVPNHLRDA--ETVTFDYVEDEMLGRGGEGGRREGGKEFMTLEEGEGLRRLVEMGYRFAERMNEGG 464 AR +S A ++A P P T S + S + +++ G G FF+WQ G FL++ +DLT + GAS GAL + L AC V A A L KY +++R LGL + +SDF+ K DLI +AS+H+PM++D K + RG CVDGS + L A V FDY D L R+G + ++L++ E ++ ++++GY +A ++++ G Sbjct: 49 ARASTIVSFQNADSAALPAPATMLL---DSPTASKPKPATTLSWAGAGIFFFWQLGAMKFLSERYDLTRVPMAGASGGALASVLAACGVPADEVLQRAYDLSVKYGIWERPLGLVGVWGSLIEQWLDDLLPDDAAERCRGKITIIVTTLPNMAQVGISDFKDKKDLITAAMASSHIPMLLDLKFARLCRGKYCVDGSFPDFFYNDNSDLLKAGGSAVIFDYFNDAKL-------VRKGRMDMLSLKKYEEVKHIMQLGYEYAAQLHQEG 307
BLAST of NO28G00970 vs. NCBI_GenBank
Match: XP_001702678.1 (predicted protein [Chlamydomonas reinhardtii] >PNW77319.1 hypothetical protein CHLRE_10g431350v5 [Chlamydomonas reinhardtii]) HSP 1 Score: 94.0 bits (232), Expect = 1.500e-15 Identity = 68/241 (28.22%), Postives = 110/241 (45.64%), Query Frame = 0 Query: 264 SSSSRSSGQDELVVNFPGGGKFFYWQSGVATFLNKYFDLTNAKLVGASAGALTATLMACHVDAHYATAIAVKLLRKYNVYKRSLGL---------------------------------------RHHVSDFRSKGDLIETCLASAHLPMVMDGKPFCMWRGWPCVDGSIWAGRRAVPNHLRDA--ETVTFDYVEDEMLGRGGEGGRREGGKEFMTLEEGEGLRRLVEMGYRFAERMNEGG 464 + SS ++ +++ G G FF+WQ G FL + +DLT + GAS GAL A L C + A A L ++ +++R LGL + +SDF+ K DLI +ASAH+PM++D K + RG CVDGS + L A V FDY +D L R+G + ++L++ E ++ ++++GY +A+ ++ G Sbjct: 74 AESSSAAKTKATTLSWAGAGIFFFWQLGALKFLAERYDLTRVPMAGASGGALAAVLACCGIPADVVLQRAYDLSVQHGIWERPLGLVGVWGSLIEQWLDDLLPDDAAERCRGKITIIVTTLPNMGQVGISDFKDKKDLINCAMASAHIPMLLDLKFARLCRGKFCVDGSFPDFFYNDNSELLKAGGSAVIFDYFQDTNL-------VRKGRMDMLSLKQYEEVKHIMQVGYEYAQTLHHEG 307
BLAST of NO28G00970 vs. NCBI_GenBank
Match: XP_005825501.1 (hypothetical protein GUITHDRAFT_144126 [Guillardia theta CCMP2712] >EKX38521.1 hypothetical protein GUITHDRAFT_144126 [Guillardia theta CCMP2712]) HSP 1 Score: 94.0 bits (232), Expect = 1.500e-15 Identity = 78/259 (30.12%), Postives = 114/259 (44.02%), Query Frame = 0 Query: 261 STGSSSSRSSGQDELVVNFPGGGKFFYWQSGVATFLNKYFDLTNAKLVGASAGALTATLMACHVDAHYATAIAVKLLRKYNVYKRSLGL----------------------------------------------RHHVSDFRSKGDLIETCLASAHLPMVMDGKPFCMWRGWPCVDGSIWAGRRAVPNHLRDAE---TVTFDYVEDEMLGRGGEGGRREGGKEFMTLEEGEGLRRLVEMGYRFAERMNEGGQLHPAIQ 471 S S + S L+V FPGGG +F+WQ+GV L K ++ + GASAG+L+A AC VD A +A KL + NV+ R GL R ++ F++K DLIE C+AS H+PM +DGK G CVDGSI R P H + + ++ + +D+ L R+ E ++L++ E + EMG ++AE M + L IQ Sbjct: 4 SRAKSEPQPSDSRPLIV-FPGGGIYFWWQAGVVQGLQKRINVDSFDFTGASAGSLSAVFAACGVDMMQAFHLAQKLAEEKNVWTRKEGLAGIWGDMIYQWLDELLPENAAEICTDRVDMVAVSVTSVRLSFLPLKRKSITRFKTKKDLIEACMASVHVPMFLDGKMSRSLDGDICVDGSITFVLRNKPWHFKPQDRKPSLMIHHQDDKEL-----MARKWNFLETISLDQFE---EMFEMGQKYAEEMIDKKTLESFIQ 253
BLAST of NO28G00970 vs. NCBI_GenBank
Match: XP_002290775.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED92527.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 93.2 bits (230), Expect = 2.500e-15 Identity = 68/236 (28.81%), Postives = 108/236 (45.76%), Query Frame = 0 Query: 279 FPGGGKFFYWQSGVATFLNKY-FDLTNAK--LVGASAGALTATLMACHVDAHYATAIAVKLLRKYNVYKRSLGL---------------------------------------RHHVSDFRSKGDLIETCLASAHLPMVMDGKPFCMWRGWPCVDGSIWAGRR-AVPNHLRDAETVTFDYVEDEMLGRGGEGGRREGGKEFMTLEEGEGLRRLVEMGYRFAERMNEGGQLHPAIQR 472 FPGGG FFYWQ+GV ++L + +DL+ ++ L GASAGAL ATL A V+ + AT +A+ L + V+ RS GL + +S F ++ DLI +AS H+P +DG +RG P +DGS A + N + D+ D +L ++ F+ + + + ++EMG +A+ M+ G+ P +R Sbjct: 68 FPGGGLFFYWQAGVISYLQEEGYDLSTSQTLLSGASAGALAATLAATEVNCYEATELALSLAEEAGVWDRSQGLQGVWGSMIYKWLDTLLPADADKRVAENLHLLVTPVPSFGKTRLSSFENRADLINANMASVHIPWFLDGNLTTNFRGKPVIDGSFLAKQSDYFSNDYSQRPKIILDFKRDPLL--------KDRALAFVKVVSKQSIFDILEMGKNYAKVMDAQGEFKPLPRR 295 The following BLAST results are available for this feature:
BLAST of NO28G00970 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO28G00970 ID=NO28G00970|Name=NO28G00970|organism=Nannochloropsis oceanica|type=gene|length=1670bpback to top protein sequence of NO28G00970.1 >NO28G00970.1-protein ID=NO28G00970.1-protein|Name=NO28G00970.1|organism=Nannochloropsis oceanica|type=polypeptide|length=519bpback to top Synonyms
Publications
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