NO28G00860, NO28G00860 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO28G00860 vs. NCBI_GenBank
Match: EWM20916.1 (ribonuclease ii [Nannochloropsis gaditana]) HSP 1 Score: 931.0 bits (2405), Expect = 3.000e-267 Identity = 567/929 (61.03%), Postives = 649/929 (69.86%), Query Frame = 0 Query: 63 PSFSSMPSSFASKTASGATAVTASPRPTIQ-TRRFANLKQKKEAEGESKKDEGFTVEDEAAMVAEFKHMMGGTGSKKPKTKAKNKKLPPRGPGPIELLPETPVEVWRGGQLAFGNYVGHGKKVSIKVRVEHGEIVTLDVGQVTGVWAENMLAGMQEDQEDEINSFLVPSANAPPPTTPESWAALRLRAAKAMKSLTPHALSLEAFWSSAMLRWKRDKAPVDSHHLAAFLFQRPEYEAALKREXXXXXXXXXXXXXXXXXXXXXXXXXXTKSISFLRLPRVTPAQRYAAAILLGSETFRFKRSVPTVETKEEGERGCV--EEEV--LMIVGQGFKPLEPSVVHSREVMSFVQAVR----------------HTEEKRLLMATEGEEEVGXXXXXXXXXXAAGSAQWDASQWRMLHHLEVVALGAGVEGLSATSKQVLKSLGEAATPEGAKSVLLRAGCWTEKKGDGRGQRQADXXXXXXXXXXXATPWPEEILELAKEAFNKTQKRRAALEKVATPNRPGRKGPHGRCDYRKAGLGAYALDPSGSEFADDALGFDPETGEILIHIADVQPLLESAPELEALARHRGEALYLPDGPLHLLPPQALQAASLSDREVNECVTAAVTLGKDGRVVNVRFLLSLIPPVTRVRYDEANDLL-ASSPEQVPAYRRKAAADLAVLLEASTTRRGMTKRNFSDSKRVSRVKRNTNGELEAISFQRTPAHLMVDEFLALYSEAGRRFLKAHSVTLPLAPGSVSGGLDAARFGTGPLRRYIDVLVQHQVVAILKGQAPFSKNEVIQRMTQVNWQSKASQKLRSVSRNKVLLESFATYCASKAXXXXXXXXXXXXXXXXXXXEVILPDVGLRSYVKLPGDWKKGGXXXXXXXXXXXPRRLFDLMAGKAFEVHVLRVDPAKGVIDLEFAHEKDAVGVTIPEVE 970 P F S + A A T+S P+ TR F+ L ++ E K E++ AM+ EFK M+ G G KK K +A KLPPRGP P++L PE+PVE+W G LAFGNY G KK SI VR+EHGE V +D GQ+TG+WA + + ++++ + LRA +AMKSL+P ALSLE FWS AM RW+RDKAPVDSHHLAAFLF RPEYEA LK E K LRLP V+PAQRYAAA+LL +ETFRFKRSVP V + G EE V L++ G+GF+P+E SVVHSREV++FVQAVR XXXXXXXXXX AGSAQWDASQWR+LHHLEV +LGAGVEGLS+TS+QVLK+LGE TPEGAK VLLRAG WTE++G G R+ + ATPWPE+ILELAKEA KTQ+RRAAL DYR +GLGAYALDP GSEFADDALGFDPETGE+LIHIADVQ L+E PELEALAR RGEA+YLPDGPLHLLPP ALQAASLSDREVNECVTAAVTLG DG V+N R LLSL+PP+TR+RYDEAN+LL ASS E +PAYRR+AA DL VLL+AS RR +TKR+FS+ KRVSRV+RNT GELEAI FQRTPAHLMVDEFLALYSEAGRRFLKAH+VTLPLAPGSVSGGLDAARFGTGPLRRY DVL Q Q+V++LKG+ P SK+EVI+RMTQVNWQSKASQKLRS SR KVLLESFATYCA+KA XXXXXXXXXXXXXXXEV+LPD GLRSYV+LPG WKK G RRLFDL AGK FEVHVLRVDPA+G I+LEFA E+DAVG+ + E E Sbjct: 66 PGFFSCSHVASRAGRPPAHAATSSRSPSSSATRIFSALVREGEXXXXXK-------EEDWAML-EFKDMLLG-GKKKAKPRA--PKLPPRGPSPVQLQPESPVEIWHQGHLAFGNYEGRLKKASINVRLEHGERVAVDAGQLTGIWAAPVTS-----EQEQTPASXXXXXXXXXXXXXXXXXXXXLRAGRAMKSLSPRALSLERFWSLAMHRWRRDKAPVDSHHLAAFLFHRPEYEAVLKEEQQERTRESETLDGSG------------KDAFTLRLPNVSPAQRYAAAVLLAAETFRFKRSVPRVLSLGSQAAGSKVGEESVPGLLVEGEGFRPMEQSVVHSREVLAFVQAVRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAGSAQWDASQWRLLHHLEVFSLGAGVEGLSSTSQQVLKALGEPTTPEGAKRVLLRAGYWTERRGAEPG-REDNVAAMTAAVQRMATPWPEDILELAKEALAKTQRRRAALAXXXXXXXXXXXXXXXXXDYRASGLGAYALDPPGSEFADDALGFDPETGEVLIHIADVQALVEGTPELEALARQRGEAIYLPDGPLHLLPPPALQAASLSDREVNECVTAAVTLGPDGSVLNARLLLSLVPPITRIRYDEANELLSASSLEDLPAYRRQAAQDLHVLLQASQARRALTKRSFSEGKRVSRVRRNTEGELEAIGFQRTPAHLMVDEFLALYSEAGRRFLKAHAVTLPLAPGSVSGGLDAARFGTGPLRRYTDVLAQQQMVSVLKGRPPLSKSEVIRRMTQVNWQSKASQKLRSASRGKVLLESFATYCAAKAKAAGXXXXXXXXXXXXXXXEVMLPDAGLRSYVRLPGGWKKKG------KDGAGSRRLFDLEAGKEFEVHVLRVDPARGSIELEFAREEDAVGIPMQEEE 959
BLAST of NO28G00860 vs. NCBI_GenBank
Match: XP_005854616.1 (weakly cyanobacterial exoribonuclease ii, partial [Nannochloropsis gaditana CCMP526] >EKU21744.1 weakly cyanobacterial exoribonuclease ii, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 258.1 bits (658), Expect = 1.100e-64 Identity = 170/366 (46.45%), Postives = 214/366 (58.47%), Query Frame = 0 Query: 63 PSFSSMPSSFASKTASGATAVTASPRPTIQ-TRRFANLKQKKEAEGESKKDEGFTVEDEAAMVAEFKHMMGGTGSKKPKTKAKNKKLPPRGPGPIELLPETPVEVWRGGQLAFGNYVGHGKKVSIKVRVEHGEIVTLDVGQVTGVWAENMLAGMQEDQEDEINSFLVPSANAPPPTTPESWAALRLRAAKAMKSLTPHALSLEAFWSSAMLRWKRDKAPVDSHHLAAFLFQRPEYEAALKREXXXXXXXXXXXXXXXXXXXXXXXXXXTKSISFLRLPRVTPAQRYAAAILLGSETFRFKRSVPTVETKEEGERGCV--EEEV--LMIVGQGFKPLEPSVVHSREVMSFVQAVRHTEEKRLLMATE 424 P F S + A A T+S P+ TR F+ L ++ E K E++ AM+ EFK M+ G G KK K +A KLPPRGP P++L PE+PVE+W G LAFGNY G KK SI VR+EHGE V +D GQ+TG+WA + + ++++ + LRA +AMKSL+P ALSLE FWS AM RW+RDKAPVDSHHLAAFLF RPEYEAALK E K L LP V+PAQRYAAA+LL +ETFRFKRSVP V + G EE V L++ G+GF+P+E SVVHSREV++FVQAVRH EE+R L+ ++ Sbjct: 71 PGFFSCSHVASRAGRPPAHAATSSRSPSSSATRIFSALVREGEXXXXXK-------EEDWAML-EFKDMLLG-GKKKAKPRA--PKLPPRGPSPVQLQPESPVEIWHQGHLAFGNYEGRLKKASINVRLEHGERVAVDAGQLTGIWAAPVTS-----EQEQTPASXXXXXXXXXXXXXXXXXXXXLRAGRAMKSLSPRALSLERFWSLAMHRWRRDKAPVDSHHLAAFLFHRPEYEAALKEEQQERTRESETLDGSG------------KDAFTLGLPNVSPAQRYAAAVLLAAETFRFKRSVPRVLSPGSEAAGSKVGEESVPGLLVEGEGFRPMEQSVVHSREVLAFVQAVRHHEERRALLRSD 408
BLAST of NO28G00860 vs. NCBI_GenBank
Match: CBN79298.1 (weakly similar to cyanobacterial Exoribonuclease II [Ectocarpus siliculosus]) HSP 1 Score: 242.7 bits (618), Expect = 4.900e-60 Identity = 230/803 (28.64%), Postives = 334/803 (41.59%), Query Frame = 0 Query: 153 PGPIELLPETPVEVWRGGQLAFGNYVGH-GKKVSIKVRVEHGEIVTLDVGQVTGVWAENMLAG-------MQEDQEDEINSFLVPSANAPPPTTPESWAALRLRAAKAMKSLTPHALSLEAFWSSAMLRWKRDKAPVDSHHLAAFLF--QRPEYEAALKREXXXXXXXXXXXXXXXXXXXXXXXXXXTKSISFLRLPRVTPAQRYAAAILLGSETFRFKRSVPTVETKEEGERG---------------------------------------------------------------CVEEEVLMIVGQGFKPLEPSVVHSREVMSFVQAVRHTEEKRLLMATEGEEEVGXXXXXXXXXXAAGSAQWDASQWR-----MLHHLEVVALGAGVEGLSATSKQVLKSLGEAATPEGAKSVLLRAGCWT-----EKKGDGRGQRQADXXXXXXXXXXXATPWPEEILELAKEAFNKTQKRRAALEKVATPNRPGRKGPHGRCDYRKAGLGAYALDPSGSEFADDALGFDPETGEILIHIADVQPLLESAPELEALARHRGEALYLPDGPLHLLPPQALQAASLSDREVNECVTAAVTLG-KDGRVVNVRFLLSLIPPVTRVRYDEANDLL-ASSPEQVPAYRRKAAADLAVLLEASTTRRGMTKRNFSDSKRVSRVKRNTNGELEAISFQRTPAHLMVDEFLALYSEAGRRFLKAHSVTLPLAPGSVSG-GLDAARFGTGPLRRYIDVLVQHQVVAILKGQAPFSKNEVIQRMTQVNWQSKASQKLRSVSRNKVLLESFATYCASK 870 PG + L P P+E W L GNY + S+ VR E GE +T+D GQ+ GVW E+ ++G D+I WA +R + ++ L L AFW +A R K V H A FLF + P KR R + +R AAA ++ E RFKR V +K G G + + VL+ VG GFK ++ SV +REV F + V E KR XXXXXXXXXX SA A + +LH LE A+G + L +K+V+ + A P AKS+L+ G WT E++G XXX PW E LE A + +RRA K G P GR D+R A G Y +D +G+ F DDA DPET E+ IHI DVQ L+ + L+ +AR R + YLP GPL ++PP AL+A S SD+ VNE VT + L K G V + R +L+ +PP + +++ + LL A+ + R A LE R + + ++ +GE +A+ + A +VDE L +Y++ R K V +P G +R+GTGPLRRYID+L Q Q+ AIL+G +K ++++ + + W+ ++ R +++ LE+ A +C ++ Sbjct: 20 PGTVILQPGDPIEFWHAQGLVLGNYESPVPGRQSLVVRTEAGEPLTIDAGQIVGVWREDEMSGHLPLGSVTAGADGDDIGD------GGSSAAVVAGWAEVREKTRALLQGTPARGLDLGAFWRAASSRGK--GFVVTPAHAAEFLFGAESPAKLGLRKRPPFRFRSPGEAF-------------------------RPSAVERAAAAHVIAGERSRFKR----VVSKRLGPAGVGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLNQPVLISVG-GFKAVDQSVAVTREVADFCRVV--GEVKRXXXXXXXXXXXXXXXXXXXXXXXXXSALARAGLFEPAFLLILHSLEAFAIGGDEQSLIPEAKRVMVEITGKANPTAAKSILVDVGLWTSRRQPEEEGGKXXXXXXXXXXDEAGEEGGVIPWSAEALEAAAALGGERARRRANYGKRRALEEVGAPAPFGRHDFRGASFGVYCIDGAGTRFLDDAFSVDPETREVFIHITDVQGLVPTGSTLDDVARMRAASEYLPQGPLFMMPPTALKAMSFSDKGVNEAVTVGIRLDPKTGGVASSRVMLTTLPPAVPLTFEQTDRLLEAAEKGETGEGRLARVAKEIQALEYVGRRSAEASGRRERGREGVKFRKGPDGETQALEVAASRAQSLVDELLTVYTQEVYRLCKRAGVAMPSLVGQQDRVATGRSRYGTGPLRRYIDILAQRQIAAILRGSGYLNKKDLMETASYLTWRQNKTRASRDEEASRLSLEALAAHCLAQ 782
BLAST of NO28G00860 vs. NCBI_GenBank
Match: XP_002289378.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED92915.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 120.9 bits (302), Expect = 2.100e-23 Identity = 127/434 (29.26%), Postives = 187/434 (43.09%), Query Frame = 0 Query: 448 ASQWRMLHHLEVVALG----------AGVEGLSATSKQVLKSLGEAATPEGAKSVLLRAGCWTEKKGDGRGQRQADXXXXXXXXXXXATPWPEEILELAKEAFNKTQKRRAALEKV---------ATPNRPGRKGPHGRCDYRKAGLGAYALDPSGSEFADDALG--FDPETG----------EILIHIADVQPLL----------ESAPELEALARHRGEALY-LPDGPLHLLPPQALQAASLS---DREVNECVTA-AVTLGKDGRVVNVRFLLSLIPPVTRVRYDEANDLLASSPEQVPAYRRKAAADLAVL-LEASTTRRGMTKRNFSDSKRVSRV--KRNTNGELEAI-----------SFQRTPAHLMVDEFLALYSEAGRRFLKAHSVTLPLAPGSVSGGLDAARFGTGPLRRYIDVLVQHQVVAIL 822 A+ R+ H LE +A+G L ++ L S+ T EGA + L+R G W++ D + ++ + PW ILE A+ + +RR L K+ A+ + P GR + L +D + F DD++G TG E+LIHIADV L S L A RG++ Y LP GPLHLLPP AL+A +L+ D N CVT A +DG++++ ++I + + EA LL + + P A + ++V S R +RN + KR SR+ + EL+A SFQR+ H +VD L LY+ A +K + +P A G SG R T PLRRYID L Q Q +++L Sbjct: 416 AADERIAHRLECLAMGDIWNDVSDRDDEERALELDVREALSSMDLPLTSEGATNALIRIGRWSQSSEDNKRKKVFE-------------PWSPAILEAARALAMRESRRREHLAKICVTAKNNKTASQSAPSSDDLEGRANL--CSLPCVCIDAKRASFRDDSVGIRLRSSTGRKVNKAASKWEVLIHIADVSDLYFGQEFRGGEDLSTDVLRRAAERRGQSRYDLPLGPLHLLPPVALEALALATNVDGLPNRCVTLWAYIDERDGKLLDAGLERTIISSPKALSFAEATSLLECNIDDTPQSLTNAKSIISVAERNLSLWNRRHRQRNEAARKRESRLATRELVASELKAAGGQSRDDGVGGSFQRSRGHRLVDSSLDLYAYAVGTMMKRANQPIPRAAG--SGADRGGRLATAPLRRYIDGLAQRQALSVL 832
BLAST of NO28G00860 vs. NCBI_GenBank
Match: EJK53507.1 (hypothetical protein THAOC_27043 [Thalassiosira oceanica]) HSP 1 Score: 118.6 bits (296), Expect = 1.100e-22 Identity = 141/485 (29.07%), Postives = 202/485 (41.65%), Query Frame = 0 Query: 421 ATEGEEEVGXXXXXXXXXXAAGSAQWDASQWRMLHHLEVVALG---------AGVEGLSATSKQVLKSLGEAATPEGAKSVLLRAGCWTEKKGDGRGQRQADXXXXXXXXXXXATPWPEEILELAKEAFNKTQKRRAALEKV--ATPNRPGRKGPHGRCDYR--KAGLGAYALDPSGSEFADDALG--FDPETG----------EILIHIADVQPLLESAPEL-----EALARH----RGEALY-LPDGPLHLLPPQALQAASLSDRE--VNECVTA-AVTLGKDGRVVNVRFLLSLIPPVTRVRYDEANDLLASSPEQ--VPAYRRKAAADL-------AVLLEASTTRRGMTKRNFSDSKRVSRVKRNTNGELEAISFQRTPAHLMVDEFLALYSEAGRRFLKAHSVTLPLAPGSVSGGLDAARFGTGPLRRYIDVLVQHQVVAIL--KGQAPFSKNEVIQRMTQVNWQSKASQKLRSVSRNK 857 A EG++ S A+ R++H LE +A+G + L ++ L LG + EGA+S L+ G W+ D G PW + LE ++ +KRR L + +P RK P + + R + L +D + F DDA+G TG E+LIHIADV + L AL RH RG + Y LP GPLHLLPP AL+A SL E N CVT A +DG+++ +LI T + + +A LL ++ V A A +L A L EA+ R + S R R+ SFQR+ H +VD L LY+ A ++ + +P APGS+ R GT PLRRYID + Q Q +A+L G P +K E SKA++ + ++ K Sbjct: 331 AVEGQKFASSAMSKNQMKKGGVSRALTAADERIIHRLECLAMGDAWRRSDNQGDRKDLEVDVRETLIGLGLPLSSEGARSALIEVGRWSNVSEDNLG--------------VVVEPWSADTLEASRSLVKAEEKRRTLLLNTCKSIKTKP-RKKPLAQLEDRFDLSSLPCVCIDAKRTSFRDDAIGIRLRSSTGRKVSKAASKWEVLIHIADVSDIYLKGEGLLPSHDIALLRHAAEQRGMSRYDLPLGPLHLLPPVALKALSLKTDEDSCNRCVTLWAYIDERDGKLLEAGLERTLIASPTALTFADATSLLDCDTDKSNVKAVLSVAHRNLSRWSRRHANLNEAARKREDRLSQKELISNATGRDGRDDG---VGGSFQRSRGHRLVDSSLDLYAFALGTLMRRANQPIPRAPGSMEN--RGGRLGTAPLRRYIDGMAQRQAIAVLCDYGGKPLTKEEC---RLAARLASKANEAISNIKAAK 792
BLAST of NO28G00860 vs. NCBI_GenBank
Match: XP_002182263.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC46164.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 115.9 bits (289), Expect = 6.900e-22 Identity = 131/451 (29.05%), Postives = 193/451 (42.79%), Query Frame = 0 Query: 448 ASQWRMLHHLEVVALG-------AGVEGLSATSKQVLKSLGEAATPEGAKSVLLRAGCWTEKKGDGRGQRQADXXXXXXXXXXXATPWPEEILELAKEAFNKTQKRRAALEKVATPNRPGRKGPHGRCDYRKAGLGAYALDPSGSEFADDALGFDP--ETG----------EILIHIADVQPL-----LESAPE-------LEALARHRGEALY-LPDGPLHLLPPQALQAASLSDR-EVNECVTA-AVTLGKDGRVVNVRFLLSLIPPVTRVRYDEANDLLASSPE-QVPAYRRKAAADLAVLLEASTTRRGMTKR-NFSDSKRVSRV-KRNTNGELEAI------SFQRTPAHLMVDEFLALYSEAGRRFLKAHSVTLPLAPGSVSGGLDAARFGTGPLRRYIDVLVQHQVVAILKGQ-APFSKNEVIQRMTQVNWQSKASQKLRSVSR 855 A+ R+L LE +A+G + L ++VL + ++ +P+GAK L++ G W+ + R PWP+E+L+ + +K + EK R D L A A+D + F DDA+G P TG E+LIHI D+ + L+S P+ L AR RG + Y LP GPLHLLPP LQA SLS R E + CVT A + GR+ + ++I + Y+ A L+ S + ++ KA A L V + N + KR R+ R N ++ FQRT H +VD L LY+ A L+ +P+A G+ + +AR T PLRRYID Q Q +A+L G P + E + N A R+V + Sbjct: 352 AADERILQRLECLAMGELFSKETSDERDLELDVREVLNGMNQSLSPQGAKKALIQVGWWSGMESFDR-----------------IEPWPKEVLDASAWYSKWARKNLGSGEK--------------RVDL--THLPAIAIDAKKTSFCDDAIGVRPRASTGRAVDLAVSKWEVLIHITDMSDIYAATSLDSIPDPEDHLLKLRDAARRRGTSRYDLPLGPLHLLPPVVLQALSLSSRKESHRCVTLWAYIDERTGRLRDAGIERTVISSPVHLSYEAATALMTDSTDANSKSFANKARAILLVSERNLQLWNNQHRDVNQAAQKREQRLAARALNNDVSHTFGASNGHFQRTRGHRLVDSSLQLYAYAINDLLRKAKAPIPIAAGADAS--RSARVATAPLRRYIDGESQRQALAVLCGYGTPMTIGECREAGIAANGARNAISNFRAVRK 767
BLAST of NO28G00860 vs. NCBI_GenBank
Match: XP_013758174.1 (ribonuclease II [Thecamonas trahens ATCC 50062] >KNC49152.1 ribonuclease II [Thecamonas trahens ATCC 50062]) HSP 1 Score: 112.1 bits (279), Expect = 1.000e-20 Identity = 108/382 (28.27%), Postives = 162/382 (42.41%), Query Frame = 0 Query: 453 MLHHLEVVALGA--GVEG------LSATSKQVLKSLGEAATPEGAKSVLLRAGCWTEKKGDGRGQRQADXXXXXXXXXXXATPWPEEILELAKEAFNKTQKRRAALEKVATPNRPGRKGPHGRCDYRKAGLGAYALDPSGSEFADDALGFDPETGEILIHIADVQPLLESAPELEALARHRGEALYLPDGPLHLLPPQALQAASLSDREVNECVTAAVTLGKDGRVVNVRFLLSLIPPVTRVRYDEANDLLASSPEQ-VPAYRRKAAADLAVLLEASTTRRGMTKRNFSDSKRVSRVKRNTNGELEAISFQRTPAHLMVDEFLALYSEAGRRFLKAHSVTLPLAPGSVSGGLDAARFGTGPLRRYIDVLVQHQVVAILKGQA 826 +L LE ALGA G G T++ +L++LG A P A+ +L+ G + +A P+P E+ + A EA + AA E+V R D R + A A+D + DDA+G DP +GE+L+H+AD P +E L++ A R + Y P P H+LPP+ L A + +TA + L ++GRV + SL+ PV R+ + EA++ L E +P Y R AAA +A + + R + K + PA L+V E + L + + A V LP GG A T PLRRY+D+ + L G A Sbjct: 262 LLLALETYALGAPSGAGGGFMRGRAGHTARSILRTLGLAQEPSAARQLLVECGHLAADASRPVSEAEA-------ALRDTFPPFPAEV-KAAAEAVEE-----AAAERVVELG--------ARVDLRH--IPALAIDAPSASIVDDAIGLDPASGEVLVHVADPLPAIELGSVLDSAAHARIASCYFPGAPQHMLPPRGLAALGFQTQRATYALTARIRLERNGRVASSSLERSLVGPVERLSFGEADEALLDGAEPLLPLYGRAAAARMA---RSRASGRHIPKHRLLEE----------------------PAKLLVQECMNLANAPAVGYAAAAGVPLP-------GGRAATI--TSPLRRYLDLAAHRNLPCALDGGA 586
BLAST of NO28G00860 vs. NCBI_GenBank
Match: GAX20325.1 (hypothetical protein FisN_9Hh034 [Fistulifera solaris]) HSP 1 Score: 104.4 bits (259), Expect = 2.100e-18 Identity = 118/405 (29.14%), Postives = 171/405 (42.22%), Query Frame = 0 Query: 448 ASQWRMLHHLEVVALGAGV-------EGLSATSKQVLKSLGEAATPEGAKSVLLRAGCWTEKKGDGRGQRQADXXXXXXXXXXXATPWPEEILELAKEAFNKTQKRRAAL----EKVATPNRPGRKGPHGRCDYRKAGLGAYALDPSGSEFADDALGFDPETGEILIHIADVQ----PLLESAPELEALARHRGEALY-LPDGPLHLLPPQALQAASLSDREVNECVTAAVTLG-KDGRVVNVRFLLSLIPPVTRVRYDEANDLLASSPEQVPAYRRKAAAD-----LAVLLEASTTRRGMTKRNFSDSKRVSRVKRNTNGELE----------AISFQRTPAHLMVDEFLALYSEAGRRFLKAHSVTLPLAPGSVSGGLDAARFGTGPLRRYIDVLVQHQVVAI 821 A+ RM+ LE +ALG E L +QVL + + +GAK LL+ G WT K D G+ Q W +L AK ++ + E+V + P R +R G+G + +G +A EILIHIADV P E+ L A RG + Y LP GP+HLLPP LQA SL + N CVT V + +DGR+++ SL+ + EA+ L+ + + D + ++ E T ++N S + R R +R T+ E + F RT AH +VD L LYS A L+ +P A G +G R T PLRR++D Q Q++A+ Sbjct: 150 ATDERMVLRLECLALGELQQEQKPLNEVLELDVRQVLLEMNLSLDADGAKEALLQLGLWTAKDQDS-GKAQF---------------WMPAVLSAAKNYIQSLKQMNSLASVNDERVDLRHLPCICVDGQRVSFRDDGIGLRSRASTGRRCFPEA-----SKWEILIHIADVSDIYVPKDEATSILREAAASRGISRYDLPTGPIHLLPPLVLQALSLRSNKANRCVTIWVYVDERDGRLLDAGVERSLVAAPYEYSFKEASRLMEEKATINLSNSLDGSIDGKTRAILLVTERILTAWSQARQNRSTAAR-KREERMTSKETDFHPENMFDDGRDGFVRTRAHRLVDSALDLYSYAAAALLRRAEAPIPRAQG--AGADRGGRVATSPLRRFLDGEAQRQLLAV 530
BLAST of NO28G00860 vs. NCBI_GenBank
Match: ESQ16143.1 (hypothetical protein N838_06665 [uncultured Thiohalocapsa sp. PB-PSB1]) HSP 1 Score: 103.6 bits (257), Expect = 3.500e-18 Identity = 89/312 (28.53%), Postives = 135/312 (43.27%), Query Frame = 0 Query: 575 LGAYALDPSGSEFADDALGFDPETGEILIHIADVQPLLESAPELEALARHRGEALYLPDGPLHLLPPQALQAASLSDREVNECVTAAVTLGKDGRVVNVRFLLSLIPPVTRVRYDEANDLLASSP-EQVPA----YRRKAAADLAVLLEASTTRRGMTKRNFSDSKRVSRVKRNTNGELEAISFQRTPAHLMVDEFLALYSEAGRRFLKAHSVTLPLA--------------------------------PGSVSG-GLDAARFGTGPLRRYIDVLVQHQVVAILKGQAPFSKNEVIQRMTQVNWQSKASQK 849 L AYA+D G++ DDAL D E I +H+ADV L+ +++ AR RG LYLP+G +++LP + L ++V+ ++ DG +V++ +LI TR+ Y EA LA +P E++ A YR + AA A +E R NGELE R + +V + + + EA RF + +P A PGS G GLD T PLRRY D+LV Q+ A+L Q P + ++ R + + A ++ Sbjct: 249 LPAYAIDDEGNQDPDDALSIDGE--RIWVHVADVAALVAPDSDMDREARARGANLYLPEGIINMLPGAVTEQLGLGLQQVSPALSFGFICADDGGLVDIDIRPTLI-RATRLTYAEAETSLADAPFERLVAAAERYRARRAAHGAASIELPEV-----------------ALRVVNGELEIRPIDRHGSRALVTDLMLMAGEAAARFCSQRGLPIPYATQPAPEQIQQPEGMAAMYAYRRQFKPSRTSVEPGSHFGLGLDVYARATSPLRRYADLLVHQQIRALLHDQQPLTAEQISARAGEADQSGVAVRR 540
BLAST of NO28G00860 vs. NCBI_GenBank
Match: GAX26767.1 (hypothetical protein FisN_9Lh034 [Fistulifera solaris]) HSP 1 Score: 102.4 bits (254), Expect = 7.900e-18 Identity = 119/409 (29.10%), Postives = 172/409 (42.05%), Query Frame = 0 Query: 452 RMLHHLEVVALG-------AGVEGLSATSKQVLKSLGEAATPEGAKSVLLRAGCWTEKKGDGRGQRQADXXXXXXXXXXXATPWPEEILELAKEAFNKTQKRRAALEKVATPNRPGRKGPHGRCDYRKAGLGAYALDPSGSEFADDALGFD----------PETG--EILIHIADVQ----PLLESAPELEALARHRGEALY-LPDGPLHLLPPQALQAASLSDREVNECVTAAVTLG-KDGRVVNVRFLLSLIPPVTRVRYDEANDLLASSPEQVPAYRRKAAAD-----LAVLLEASTTRRGMTKRNFSDSKRVSRVKRNTNGELE----------AISFQRTPAHLMVDEFLALYSEAGRRFLKAHSVTLPLAPGSVSGGLDAARFGTGPLRRYIDVLVQHQVVAI 821 R++ LE +ALG E L +QVL + + +GAK L + G WT K D G+ Q W +L AK + ++ + ++L+ V R D R L +D F DDA+G PE EILIHIADV P E+ L A RG + Y LP GP+HLLPP LQA SL + N VT V + +DGR+++ SL+ ++EA+ L+ ++ + D + ++ E T +++ S + R R +R T+ E E F RT AH +VD L LYS A L+ +P A G G R T PLRR++D Q Q++A+ Sbjct: 232 RIVLRLECLALGEQQQRQQTSNEVLELDVRQVLLEMNLSLDADGAKEALFQLGLWTAKDQDS-GKAQF---------------WTPSVLSAAKN-YIQSVDQMSSLDSVNDE----------RVDLRH--LPCICVDGQRVSFRDDAIGLRSRASTGRRCFPEASKWEILIHIADVSDIYVPKDEATSILREAAASRGISRYDLPTGPVHLLPPVILQALSLRSNKANRSVTIWVYVDERDGRLLDAGVERSLVAAPYEYSFNEASRLMEKETTNNLSHSSNGSRDGKARAILLVTERIVTAWNQARQSRSTAAR-KREERLTSKETEFHPESMFDDGRDGFVRTRAHRLVDSALDLYSYAAAALLRRVEAPIPRAQG--VGADRGGRIATSPLRRFLDGEAQRQLLAV 608 The following BLAST results are available for this feature:
BLAST of NO28G00860 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO28G00860 ID=NO28G00860|Name=NO28G00860|organism=Nannochloropsis oceanica|type=gene|length=2934bpback to top protein sequence of NO28G00860.1 >NO28G00860.1-protein ID=NO28G00860.1-protein|Name=NO28G00860.1|organism=Nannochloropsis oceanica|type=polypeptide|length=978bpback to top Synonyms
Publications
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