NO28G00820, NO28G00820 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO28G00820 vs. NCBI_GenBank
Match: EWM20899.1 (chromosome transmission fidelity [Nannochloropsis gaditana]) HSP 1 Score: 788.5 bits (2035), Expect = 3.000e-224 Identity = 427/706 (60.48%), Postives = 512/706 (72.52%), Query Frame = 0 Query: 538 QRRDKRPKEQARAILLCGPPGMGKTTLAHVVAAHCGYRPLEFNASDDRSAAVLQEKITRAMQNQAVLGDKRPNCIILDEADGIDGKTGIKMIVDMIKAPLKS---DAAGGKKKSGG----DGSASVPALTRPLICICNDLYAPQLRPLRDVATVFRFRKTSSTRLLQRLKTICLAESLPLESTALGALCEAAGNDVRSCLNTLQFFKSRVPQPTGGEAAGGVGQ----AARASALSRQLMQHIGAGLKDQEKDMLQVCNAIFRKPQAKTSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRDTDMVISTVAAFSDHGQVLQAAHENFCQMRYTDPNLTKTALAAEWLAFSDLIHGRQLEGRCHLMEDLHLATAAAIHLLCRVEVRPRITLPRKDYEFRSARLSRQHILQSFTEGCVLQALWARHPAAIVLDVVSPLVHILNPSLRPINPDLYSFAEKAMLRQLVGVMMACGVSFMHTNRAGL-YSHQ-QGAHDPLEMVPMLVHLAEFGLSNDGSGAPKDEALPVQRPRPARVLPTFVKLLATQEAKLEVMKQAECRKADAIKARHGGVLPTALNKKAERPGHALPSFSTPSPADTKKPRFGAANLSAKLLMPDMKEEPTHKTWFVKLGTKRSTSKAKPSISYN-DRLDALQQQGQDGGSHHSGEARQQPATNKATIRFKYVAGYTNAVRRPVCMKDML 1230 QRRD+RP+ ARAILL GPPG+GKTTLAHV+A HCGYRPLE NASDDRSA L+EK+TRAMQNQAVLGDKRPNCIILDEADGI+GK +KMIV++IKAPLKS +AG K ++GG DGS S P LTRPLICICNDLY P LR LR+VATVFRFR+ ++ RLLQRLKTIC AE+LP+E AL LCEA+G+DVRSCLNTLQFF++R+P + G Q AA AS LSRQL++++G GLKDQEKDMLQVC ++FRKP +K +A RDTD V+++VA++SDH VL AA EN+CQ+R+TDP+LTK AAEWLAFSDL+HGRQ+EG H+MEDLHLATAAA+HLLCRVE RPR+ LPRKD+E+RSARLSRQHILQSF EGC LQALWAR P +VLDVVSPL+HILNPSLRP+NPDLYSFAEKA LR LV V++ACG+S++ + +GL + HQ GA + LEM+P LVHLAEFGL+NDG+GAPK E LPVQRPRP R+LP FVKLLATQEAKLE +++ E RK DA+KA+ G T ++ + LPS + S T P L+ +EEP K W+VKLGTKRST+K K + + +G D G +Q A K+T+RFKYVAGYTNAVRRPV MKDM+ Sbjct: 41 QRRDRRPEPSARAILLAGPPGIGKTTLAHVIAEHCGYRPLEINASDDRSAGALREKMTRAMQNQAVLGDKRPNCIILDEADGIEGKAAMKMIVNIIKAPLKSKQKGSAGSKDEAGGHSGADGSVSCPPLTRPLICICNDLYVPALRALREVATVFRFRRRTNPRLLQRLKTICQAENLPVEGVALSVLCEASGHDVRSCLNTLQFFQARLPAAVLSQGQGQEEQDKPPAAFASHLSRQLLEYVGEGLKDQEKDMLQVCQSLFRKPASKATATPALLPGEEGAGTEERAQSRV----------------RDTDRVMTSVASYSDHAHVLLAAQENYCQLRFTDPSLTKVLHAAEWLAFSDLVHGRQMEG-LHVMEDLHLATAAALHLLCRVETRPRLALPRKDHEYRSARLSRQHILQSFGEGCSLQALWARRPTPVVLDVVSPLMHILNPSLRPVNPDLYSFAEKAGLRHLVDVLLACGISYVQSPGSGLSHPHQHSGAPERLEMLPALVHLAEFGLANDGTGAPKSETLPVQRPRPPRLLPAFVKLLATQEAKLEALRRTELRKTDALKAKKGMSSSTGQGPRS----NGLPSKAAASCEATPGPNIAP-------LVAKEEEEPGPKAWYVKLGTKRSTTKTKSRTQTDGSPVGDTGTRGLDLGEGLFPPEHKQSAAKKSTVRFKYVAGYTNAVRRPVYMKDMI 718
BLAST of NO28G00820 vs. NCBI_GenBank
Match: CBJ48332.1 (similar to CTF18, chromosome transmission fidelity factor 18 homolog isoform 3 [Ectocarpus siliculosus]) HSP 1 Score: 368.6 bits (945), Expect = 7.400e-98 Identity = 249/688 (36.19%), Postives = 345/688 (50.15%), Query Frame = 0 Query: 434 LWVNRYSPSAFPHLLSDEATNREVLRLLRSWDEFVFKRAVPKTLAEAPAQPAWKTNWXXXXXXXXXXXXXXXXXXXXXXXXXXNPMLTPRERASMDAEREAAAVQRRDKRPKEQARAILLCGPPGMGKTTLAHVVAAHCGYRPLEFNASDDRSAAVLQEKITRAMQNQAVLGDKRPNCIILDEADGIDGKTGIKMIVDMIKAPL-KSDAAGGKKKSGGDGSASVPALTRPLICICNDLYAPQLRPLRDVATVFRFR-KTSSTRLLQRLKTICLAESLPLESTALGALCEAAGNDVRSCLNTLQFFKSRVPQPTGGEAAGGVGQAARASALSRQLMQHIGAGLKDQEKDMLQVCNAIFRKPQAKTSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRDTDMVISTVAAFSDHGQVLQAAHENFCQMRYTDPNLTKTALAAEWLAFSDLIHGRQLEGRCHLMEDLHLATAAAIHLLCRVEVRPRITLPRKDYEFRSARLSRQHILQSFTEGCVLQALWARHPAAIVLDVVSPLVHILNPSLRPINPDLYSFAEKAMLRQLVGVMMACGVSFMHTNRAGLYSHQQGAHDPLEMVPMLVHLAEFGLSNDGSGAPKDEALPVQRPRPARVLPTFVKLLATQEAKLEVMKQAECRK----ADAIKARHGGVLPTALNKKAER-PGH 1115 LWV++Y+P F LLSDE NREVLR +++WD FVFK+ +T + + M A+ DKRP +AR I+LCGPPG+GKTTLA VVA H GYR E NASDDR+A+VL++++T AM+ +L DKRPN I+LDE DG DGK +++VD+ APL K+ AA G GG +LTRPL+ ICND + P LRP+R +A VF FR K+S RL+QRLK IC +E L + + AL L + + DVRSCL+TLQF R ++G V A+ A L+ + G+KD+ +D+ +V ++F + ++ T R V V AF+DH +VL HENF +R+ DP L+K A A +WL +DL+ R + + + AA +H LCR + R +T P+KDYE R+AR ++ +IL SF +G L A R A+VLD++S L+ IL P+LRP+NPDL S E+A R LVG++++CG++F + + EF L K E PR A L + + E LE M+QAE K DA A++ P A A R GH Sbjct: 325 LWVDKYAPDGFRDLLSDEKINREVLRAVKAWDPFVFKKETARTGTVTAEK--------------------------------------KKGVGGMKPLSMASTGDATDKRP--EARIIMLCGPPGLGKTTLAQVVAKHAGYRVYEINASDDRTASVLRQRMTEAMEGNTLLADKRPNLIVLDEVDGADGKAAAQVLVDIATAPLAKATAATG----GGKKGKRRTSLTRPLVLICNDQWTPALRPIRAIAQVFVFRAKSSPARLVQRLKAICTSERLTVNTDALTRLADRSHLDVRSCLHTLQFVARRA-------SSGSVTNASAA------LLTAVAEGIKDERRDLFEVLRSVFTRKKSGTK------------------------RRLFLGGEQGSMADRKDAEVFEEVQAFNDHSKVLAGVHENFLGVRFNDPTLSKAAAAMDWLEMADLMDTRTNQTQDYSFSRYAPVAAAGVHFLCRSDQRSTVTQPKKDYEARTARAAKSNILHSFADGRQLGAT-GRTTQALVLDMLSHLMDILAPTLRPLNPDLLSPQERARFRDLVGILLSCGLTFSPQS-----AXXXXXXXXXXAFGAAARAQEFALEPAIDQLLKYEGYEFAHPRLAPPL----RPMVAHEVALEGMRQAEAAKLSHREDAAFAKNAASDPFAAASSATRGTGH 921
BLAST of NO28G00820 vs. NCBI_GenBank
Match: GAQ84926.1 (DNA replication checkpoint protein CHL12/CTF18 [Klebsormidium nitens]) HSP 1 Score: 316.6 bits (810), Expect = 3.300e-82 Identity = 272/867 (31.37%), Postives = 402/867 (46.37%), Query Frame = 0 Query: 418 AARTLQNMAPAPRPEQLWVNRYSPSAFPHLLSDEATNREVLRLLRSWDEFVFKR-AVPKT--LAEAPA--------------------------QPAWKTNWXXXXXXXXXXXXXXXXXXXXXXXXXXNPMLTPRERASMDAEREAAAVQRRDKRPKEQARAILLCGPPGMGKTTLAHVVAAHCGYRPLEFNASDDRSAAVLQEKITRAMQNQAVLGDKRPNCIILDEADG-IDGKTGIKMIVDMIKAPLKSDAAGGK------KKSGGDGSA---------SVPALTRPLICICNDLYAPQLRPLRDVATVFRFRKTSSTRLLQRLKTICLAESLPLESTALGALCEAAGNDVRSCLNTLQFFKSRVPQPTGGEAAGGVGQAARASALSRQLMQHIGAGLKDQEKDMLQVCNAIFRKPQAKTSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRDTDMVISTVAAFSDHGQVLQAAHENFCQMRYTDPNLTKTALAAEWLAFSDLIHGRQLEGRCH-LMEDLHLATAAAIHLLCRVEVRPRITLPRKDYEFRSARLSRQHILQSFTEGCVLQALWARHPAAIVLDVVSPLVHIL-NPSLRPINPDLYSFAEKAMLRQLVGVMMACGVSFMHTNRAGLYSHQQGAHDPLEMVPMLVHLAEFGLSNDGSGAPKDEALPVQRPRPARVLPTFVKLLATQEAKLEVMKQAECRKADAIKARHGGVLPTALNKKAERPGHALPSFSTPSPADTKKPRFGAANLSAKLLMPDMKEEPTHKTWFVKLGTKRSTSKAKPSISYNDRL--DALQQQGQDGGSHHSGEARQQPATNKATIR------FKYVAGYTNAVRRPVCMKDML 1230 A+ T M+ P+ E LWV++Y+P AF LLSDE TNREVLR ++ WD VF R + P T +A AP +P WK XXXXXXXX A V ++ + + + +LLCG PG+GKTTLAHV A HCGYR +E NASDDRSA L+++I A+Q Q V+GD+RPNC+++DE DG ++G G K +D + A + + A+G + ++GG+ A +V L+RP+ICICND+YAP LR LR VA VF F + +RL RLK IC E ++ AL ALCE DVR+CLNTLQF R G+A R + +S Q++ G KD ++ ++ +F++ ++K Q++ + + ++ + +H V++ HENF +MRY + L KT EW+ S+L+ R++ R H + AT A+ L RP I P+ +FR+ S++ +LQS+ +P+AI+ D+VSPL+ I+ P+LRP+ L S EK + +LV M+ G ++ G+ GA L+ P L LA F +G RP R L ++ + E L+++++ +A AR V P+ L + P S SPA + L+ + E P K KL K + AK ++Y +R AL++ G E P + IR +K+ G+TNAVRRPV +KD+L Sbjct: 244 ASETDVEMSDGPQEEMLWVDKYAPRAFTELLSDEQTNREVLRWIKEWDPCVFHRPSRPPTSFVAHAPVASYRGGFTARGGRNSTGLQPGGRGGDRPDWKHLKEAKFQGRGRGFGEQQNGGXXXXXXXXXXXXXXXXXXXXXXXXLQAPVFKKPSDGRPEQKVLLLCGAPGLGKTTLAHVAAHHCGYRVVEVNASDDRSANSLKQRILDAVQMQPVMGDRRPNCLVIDEIDGALNGAEG-KGAIDALLAIVNAGASGSRDSDKDADEAGGNHLAPSKXXXXXGAVKKLSRPVICICNDMYAPALRQLRQVAKVFVFAPPAPSRLATRLKFICTKEGYSADTRALTALCEHTECDVRACLNTLQFLHRR-------------GKALRLADISSQVV-----GRKDMTHNVFEIWTELFQRKKSKAGT-----------------GTALSGSPAMQGTMTRNAEQQEFHRIQNLLSGYGEHDFVMEGVHENFLRMRYHEGTLQKTVECLEWMGDSELM-SRRVHSRQHFFLMAYQPATLQAVRRLIANPERPHIEFPKTYNKFRADHSSQRQLLQSWQMEMDPGVARGLNPSAIIRDLVSPLLDIVAPPTLRPVASQLLSEKEKGEVSELVDTMIGYGFTYKLQTGFGV---NPGAGPQLD--PALGRLAAF----EG------------RPFQHRELTVTLREMLAHEVSLQIIRKEGAARA----ARAAAVNPSKLGDVSGSPADVTRSRPAKSPAKAEPGASKNGGLNGR------AEAPPRKAENGKLEKKVVKAAAKVYVNYFERFKKPALKRNGV--------EEEAVPVQSVTNIRDAMPVLYKFHEGFTNAVRRPVLVKDLL 1034
BLAST of NO28G00820 vs. NCBI_GenBank
Match: XP_009525797.1 (hypothetical protein PHYSODRAFT_300088 [Phytophthora sojae] >EGZ16739.1 hypothetical protein PHYSODRAFT_300088 [Phytophthora sojae]) HSP 1 Score: 308.9 bits (790), Expect = 7.000e-80 Identity = 216/666 (32.43%), Postives = 324/666 (48.65%), Query Frame = 0 Query: 434 LWVNRYSPSAFPHLLSDEATNREVLRLLRSWDEFVF-KRAVPK-TLAEAPAQP---AWKTNWXXXXXXXXXXXXXXXXXXXXXXXXXXNPMLTPRERASMDAEREAAAVQRRDKRPKEQARAILLCGPPGMGKTTLAHVVAAHCGYRPLEFNASDDRSAAVLQEKITRAMQNQAVLGDKRPNCIILDEADGI----DGKTGIKMIVDMIKAPLKSDAAGGKKKSGGDGSA-SVPALTRPLICICNDLYAPQLRPLRDVATVFRFRKTSSTRLLQRLKTICLAESLPLESTALGALCEAAGNDVRSCLNTLQFFKSRVPQPTGGEAAGGVGQAARASALSRQLMQHIGAGL---KDQEKDMLQVCNAIFRKPQAKTSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRDTDMVISTVAAFSDHGQVLQAAHENFCQMRYTDPNLTKTALAAEWLAFSDLIHGRQLEGRCHLMEDLHLATAAAIHLLCRVEVRPRITLPRKDYEFRSARLSRQHILQSFTEGCVLQALWARHPAAIVLDVVSPLVHILNPSLRPINPDLYSFAEKAMLRQLVGVMMACGVSFMHTNRAGLYSHQQGAHDPLEMVPMLVHLAEFGLSNDGSGAPKDEALPVQRPRPARVLPTFVKLLATQEAKLEVMKQAE 1087 LW+++Y P +F LLSDE TNREVL ++SWD FVF K+ P TL +PA+P K +W + + S AE E + DKRP + ILLCGPPG GKTTLA++VA H GY P+E NASDDR+A+VL+ K+ AM+ Q++ G+++PNCIILDE DG DGK+ I++I+++ APL+ +KK+G +A + LTRPLICICNDLYA LRPLR +A +F S RL+ RLK IC E + + AL ALC +A ND+R CLNTLQF ++ +R + + + + GL KD M + + +F + ++K++ + T+ + V + + ++ EN +M + DP + K EWL +D R + + + A A H C R R+ PR +E + R ++IL + EG LQ + +V+DVV LV L+P++R INP L + EK M+++L+ +M + G+SF H + + + P L L EF ++DG+ +LP V+ + +E +LE M+++E Sbjct: 230 LWLDKYKPQSFLDLLSDERTNREVLTWIKSWDRFVFPKKLRPNGTLPVSPAKPNSFGNKFSW------------------------------AAKNQGSGRAESE----EDEDKRPFN--KIILLCGPPGAGKTTLANIVARHAGYNPIEVNASDDRTASVLRNKLISAMEMQSIWGERKPNCIILDEIDGAMNGSDGKSAIEVILEIANAPLQ------RKKTGAKTTAKNRHPLTRPLICICNDLYASVLRPLRQMAKIFTLDTPHSQRLVTRLKYICRHEGIKASTGALAALCSSADNDIRYCLNTLQFQSTQ----------------SRRAVKDKSAIVTLTTGLVAQKDHVHGMFEAMDLVFFEARSKSA----------------------------------KGERPATEKIEEAVVSLGNFPLLINGLDENVPKMIFNDPTMNKICDVFEWLGLADEYENRARSEQQFVFQAYIPFAAIATHAACCTSSRRRVEYPRAQFELQKKRDRSENILVALAEGAQLQPILRMSTNVLVVDVVPWLVASLSPNIRRINPSLQTKEEKVMIQRLIELMASLGLSFRH-------KYLPDGSEDYSLEPALNELVEFRGNDDGAVYQS-------------MLPLTVRKMIAREVELEQMRRSE 783
BLAST of NO28G00820 vs. NCBI_GenBank
Match: XP_002896884.1 (chromosome transmission fidelity protein, putative [Phytophthora infestans T30-4] >EEY66583.1 chromosome transmission fidelity protein, putative [Phytophthora infestans T30-4]) HSP 1 Score: 306.2 bits (783), Expect = 4.500e-79 Identity = 216/655 (32.98%), Postives = 314/655 (47.94%), Query Frame = 0 Query: 434 LWVNRYSPSAFPHLLSDEATNREVLRLLRSWDEFVFKRAVPKTLAEAPAQPAWKTNWXXXXXXXXXXXXXXXXXXXXXXXXXXNPMLTPRERASMDAEREAAAVQRRDKRPKEQARAILLCGPPGMGKTTLAHVVAAHCGYRPLEFNASDDRSAAVLQEKITRAMQNQAVLGDKRPNCIILDEADGI----DGKTGIKMIVDMIKAPLKSDAAGGKKKSGGDGSASVPALTRPLICICNDLYAPQLRPLRDVATVFRFRKTSSTRLLQRLKTICLAESLPLESTALGALCEAAGNDVRSCLNTLQFFKSRVPQPTGGEAAGGVGQAARASALSRQLMQHIGAGLKDQEKDMLQVCNAIFRKPQAKTSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRDTDMVISTVAAFSDHGQVLQAAHENFCQMRYTDPNLTKTALAAEWLAFSDLIHGRQLEGRCHLMEDLHLATAAAIHLLCRVEVRPRITLPRKDYEFRSARLSRQHILQSFTEGCVLQALWARHPAAIVLDVVSPLVHILNPSLRPINPDLYSFAEKAMLRQLVGVMMACGVSFMHTNRAGLYSHQQGAHDPLEMVPMLVHLAEFGLSNDGSGAPKDEALPVQRPRPARVLPTFVKLLATQEAKLEVMKQ 1085 LW++++ P +F LLSDE TNREVL ++SWD FVF + + + A PA + + + S + A DKRP + IL+CGPPG GKTTLA++VA H GY P+E NASDDR+A VL+ KI AM+ Q++ G+++PNCIILDE DG DGK+GI++I +++ APL+ AG K + + LTRPLICICNDLYA LRPLR +A +F S RL+ RLK IC E + + AL LC +A ND+R CLNTLQF Q T ++ G G A ++ L Q KD M +V + +F + ++ ++ + + VA+ + ++ EN +M + DP + K EWL + R + + + A A H C R R+ PR +E + R ++IL + TEG LQ L P+ +V+DVV LV L+P++R INP L + EK M+++L+ +M + G+SF H R G+ D + P L L EF S +G G P LP+ V+ + +E +LE M++ Sbjct: 215 LWLDKFRPQSFLDLLSDERTNREVLSWIKSWDRFVFPKK-KRAIGAHSATPAKTSGFGALHKSPW------------------------SQSLSQNYANSIAGEDDEDKRPFN--KIILICGPPGAGKTTLANIVARHAGYNPIEVNASDDRTAPVLRNKIISAMEMQSIWGERKPNCIILDEIDGAMNGSDGKSGIEVIQEIVNAPLERKKAGAK-----TAAKNRHPLTRPLICICNDLYASVLRPLRQMAKIFTLDAPHSQRLVTRLKCICRHEGIRASTGALATLCSSADNDIRYCLNTLQF------QTT--QSRGKTGVATLSTGLVAQ---------KDHAHGMFEVLDLVFYETRSNSAKREVPV----------------------------------AEKIDEAVASLGNFPLLISGLDENVPKMIFNDPTMNKICDVFEWLGLAAEYEYRARSEQQYAFQAYIPFAAIATHASCCTSSRRRVEYPRGQFEAQKRRDRSENILTALTEGAQLQPLLRMSPSVLVVDVVPWLVASLSPNIRRINPSLQTKEEKLMIQRLIQLMASLGLSFRHKYR------PDGSED-YALEPALNELVEF-RSREG-GTPYQYMLPIS-----------VRKMIAREVELEQMRR 766
BLAST of NO28G00820 vs. NCBI_GenBank
Match: ETK94357.1 (hypothetical protein L915_02569 [Phytophthora parasitica]) HSP 1 Score: 300.4 bits (768), Expect = 2.500e-77 Identity = 222/701 (31.67%), Postives = 324/701 (46.22%), Query Frame = 0 Query: 434 LWVNRYSPSAFPHLLSDEATNREVLRLLRSWDEFVF-KRAVPKTLAEAPAQPAWKTNWXXXXXXXXXXXXXXXXXXXXXXXXXXNPMLTPRERASMDAEREAAAVQRRDKRPKEQARAILLCGPPGMGKTTLAHVVAAHCGYRPLEFNASDDRSAAVLQEKITRAMQNQAVLGDKRPNCIILDEADGI----DGKTGIKMIVDMIKAPLKSDAAGGKKKSGGDGSASVPALTRPLICICNDLYAPQLRPLRDVATVFRFRKTSSTRLLQRLKTICLAESLPLESTALGALCEAAGNDVRSCLNTLQFFKSRVPQPTGGEAAGGVGQAARASALSRQLMQHIGAGLKDQEKDMLQVCNAIFRKPQAKTSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRDTDMVISTVAAFSDHGQVLQAAHENFCQMRYTDPNLTKTALAAEWLAFSDLIHGRQLEGRCHLMEDLHLATAAAIHLLCRVEVRPRITLPRKDYEFRSARLSRQHILQSFTEGCVLQALWARHPAAIVLDVVSPLVHILNPSLRPINPDLYSFAEKAMLRQLVGVMMACGVSFMHTNRAGLYSHQQGAHDPLEMVPMLVHLAEFGLSNDGSGAPKDEALPVQRPRPARVLPTFVKLLATQEAKLEVMKQAE---------CRKADAIKARHGGVLPTALNKKAERPGHALPSFS 1121 LW+++Y P +F LLSDE NREVL ++SWD FVF K+ P + P PA KTN + S + A DKRP + IL+CGPPG GKTTLA++VA H GY P+E NASDDR+A+VL+ KI AM+ Q++ G+++PNCIILDE DG DGK+ I++I +++ APL+ KK + + + LTRPLICICNDLYA LRPLR +A +F + S RL+ RLK IC E + + L LC +A ND+R CLNTLQF + Q G A LS L+ H KD M + + +F + ++K++ T+ + A+ + ++ EN +M + DP + K EWL +D R + + + A A H C R R+ PR +E + R ++IL + TEG LQ + + +V+DV+ LV L+P++R IN L + EK M+++L+ +M + G+SF H R G+ D + P L L EF S G+ +LP V+ + +E +LE M++ E KA +K + +KA + + LP S Sbjct: 224 LWLDKYRPQSFLDLLSDERINREVLSWIKSWDRFVFPKKKRPNGV--HPVPPA-KTNANKAPW---------------------------NQELSQNPSNGNAVEDDEDKRPFN--KIILICGPPGAGKTTLANIVARHAGYNPIEVNASDDRTASVLRNKIISAMEMQSIWGERKPNCIILDEIDGAMNGSDGKSAIEVIQEIVNAPLQR-----KKAAAKTAAKNRHPLTRPLICICNDLYASVLRPLRQMAKIFTLDASHSQRLVTRLKYICRHEGIKASTGVLATLCSSADNDIRYCLNTLQF---QTTQSRGKSA---------VVTLSTGLVAH-----KDHVHGMFEALDLVFYEARSKSAKGDVPV----------------------------------TEKIDEAAASLGNFPLLINGLDENVPKMIFNDPTMNKICDVFEWLGLADEYEYRARSEQQYAFQAYIPFAAIATHAACCTSSRRRVEYPRAQFEAQKRRDRSENILTALTEGAQLQPILRMSTSVLVVDVIPWLVASLSPNIRRINLSLQTKEEKLMIQRLIQLMASLGLSFRHKYR------PDGSED-YALEPALNELVEFRSSEGGAAYQS-------------MLPMAVRKMIAREVELEQMRRNEKSSPSTKQNNSKASTVKV--XXXXXXXIEEKAAKAAYVLPELS 814
BLAST of NO28G00820 vs. NCBI_GenBank
Match: ETI54487.1 (hypothetical protein F443_02694 [Phytophthora parasitica P1569] >ETO83238.1 hypothetical protein F444_02697 [Phytophthora parasitica P1976]) HSP 1 Score: 299.7 bits (766), Expect = 4.200e-77 Identity = 222/701 (31.67%), Postives = 323/701 (46.08%), Query Frame = 0 Query: 434 LWVNRYSPSAFPHLLSDEATNREVLRLLRSWDEFVF-KRAVPKTLAEAPAQPAWKTNWXXXXXXXXXXXXXXXXXXXXXXXXXXNPMLTPRERASMDAEREAAAVQRRDKRPKEQARAILLCGPPGMGKTTLAHVVAAHCGYRPLEFNASDDRSAAVLQEKITRAMQNQAVLGDKRPNCIILDEADGI----DGKTGIKMIVDMIKAPLKSDAAGGKKKSGGDGSASVPALTRPLICICNDLYAPQLRPLRDVATVFRFRKTSSTRLLQRLKTICLAESLPLESTALGALCEAAGNDVRSCLNTLQFFKSRVPQPTGGEAAGGVGQAARASALSRQLMQHIGAGLKDQEKDMLQVCNAIFRKPQAKTSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRDTDMVISTVAAFSDHGQVLQAAHENFCQMRYTDPNLTKTALAAEWLAFSDLIHGRQLEGRCHLMEDLHLATAAAIHLLCRVEVRPRITLPRKDYEFRSARLSRQHILQSFTEGCVLQALWARHPAAIVLDVVSPLVHILNPSLRPINPDLYSFAEKAMLRQLVGVMMACGVSFMHTNRAGLYSHQQGAHDPLEMVPMLVHLAEFGLSNDGSGAPKDEALPVQRPRPARVLPTFVKLLATQEAKLEVMKQAE---------CRKADAIKARHGGVLPTALNKKAERPGHALPSFS 1121 LW+++Y P +F LLSDE NREVL ++SWD FVF K+ P + P PA KTN + S + A DKRP + IL+CGPPG GKTTLA++VA H GY P+E NASDDR+A+VL+ KI AM+ Q++ G+++PNCIILDE DG DGK+ I++I +++ APL+ KK + + + LTRPLICICNDLYA LRPLR +A +F S RL+ RLK IC E + + L LC +A ND+R CLNTLQF + Q G A LS L+ H KD M + + +F + ++K++ T+ + A+ + ++ EN +M + DP + K EWL +D R + + + A A H C R R+ PR +E + R ++IL + TEG LQ + + +V+DV+ LV L+P++R IN L + EK M+++L+ +M + G+SF H R G+ D + P L L EF S G+ +LP V+ + +E +LE M++ E KA +K + +KA + + LP S Sbjct: 224 LWLDKYRPQSFLDLLSDERINREVLSWIKSWDRFVFPKKKRPNGV--HPVPPA-KTNANKAPW---------------------------NQELSQNPSNGNAVEDDEDKRPFN--KIILICGPPGAGKTTLANIVARHAGYNPIEVNASDDRTASVLRNKIISAMEMQSIWGERKPNCIILDEIDGAMNGSDGKSAIEVIQEIVNAPLQR-----KKAAAKTAAKNRHPLTRPLICICNDLYASVLRPLRQMAKIFTLDAPHSQRLVTRLKYICRHEGIKASTGVLATLCSSADNDIRYCLNTLQF---QTTQSRGKSA---------VVTLSTGLVAH-----KDHVHGMFEALDLVFYEARSKSAKGDVPV----------------------------------TEKIDEAAASLGNFPLLINGLDENVPKMIFNDPTMNKICDVFEWLGLADEYEYRARSEQQYAFQAYIPFAAIATHAACCTSSRRRVEYPRAQFEAQKRRDRSENILTALTEGAQLQPILRMSTSVLVVDVIPWLVASLSPNIRRINLSLQTKEEKLMIQRLIQLMASLGLSFRHKYR------PDGSED-YALEPALNELVEFRSSEGGAAYQS-------------MLPMAVRKMIAREVELEQMRRNEKSSPSTKQNNSKASTVKV--XXXXXXXIEEKAAKAAYVLPELS 814
BLAST of NO28G00820 vs. NCBI_GenBank
Match: XP_008916004.1 (hypothetical protein PPTG_19356 [Phytophthora parasitica INRA-310] >ETL47733.1 hypothetical protein L916_02542 [Phytophthora parasitica] >ETM54027.1 hypothetical protein L914_02564 [Phytophthora parasitica] >ETM98658.1 hypothetical protein PPTG_19356 [Phytophthora parasitica INRA-310] >ETP24313.1 hypothetical protein F441_02655 [Phytophthora parasitica CJ01A1] >ETP52299.1 hypothetical protein F442_02658 [Phytophthora parasitica P10297] >KUF77729.1 Chromosome transmission fidelity protein 18 [Phytophthora nicotianae]) HSP 1 Score: 299.7 bits (766), Expect = 4.200e-77 Identity = 222/701 (31.67%), Postives = 323/701 (46.08%), Query Frame = 0 Query: 434 LWVNRYSPSAFPHLLSDEATNREVLRLLRSWDEFVF-KRAVPKTLAEAPAQPAWKTNWXXXXXXXXXXXXXXXXXXXXXXXXXXNPMLTPRERASMDAEREAAAVQRRDKRPKEQARAILLCGPPGMGKTTLAHVVAAHCGYRPLEFNASDDRSAAVLQEKITRAMQNQAVLGDKRPNCIILDEADGI----DGKTGIKMIVDMIKAPLKSDAAGGKKKSGGDGSASVPALTRPLICICNDLYAPQLRPLRDVATVFRFRKTSSTRLLQRLKTICLAESLPLESTALGALCEAAGNDVRSCLNTLQFFKSRVPQPTGGEAAGGVGQAARASALSRQLMQHIGAGLKDQEKDMLQVCNAIFRKPQAKTSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRDTDMVISTVAAFSDHGQVLQAAHENFCQMRYTDPNLTKTALAAEWLAFSDLIHGRQLEGRCHLMEDLHLATAAAIHLLCRVEVRPRITLPRKDYEFRSARLSRQHILQSFTEGCVLQALWARHPAAIVLDVVSPLVHILNPSLRPINPDLYSFAEKAMLRQLVGVMMACGVSFMHTNRAGLYSHQQGAHDPLEMVPMLVHLAEFGLSNDGSGAPKDEALPVQRPRPARVLPTFVKLLATQEAKLEVMKQAE---------CRKADAIKARHGGVLPTALNKKAERPGHALPSFS 1121 LW+++Y P +F LLSDE NREVL ++SWD FVF K+ P + P PA KTN + S + A DKRP + IL+CGPPG GKTTLA++VA H GY P+E NASDDR+A+VL+ KI AM+ Q++ G+++PNCIILDE DG DGK+ I++I +++ APL+ KK + + + LTRPLICICNDLYA LRPLR +A +F S RL+ RLK IC E + + L LC +A ND+R CLNTLQF + Q G A LS L+ H KD M + + +F + ++K++ T+ + A+ + ++ EN +M + DP + K EWL +D R + + + A A H C R R+ PR +E + R ++IL + TEG LQ + + +V+DV+ LV L+P++R IN L + EK M+++L+ +M + G+SF H R G+ D + P L L EF S G+ +LP V+ + +E +LE M++ E KA +K + +KA + + LP S Sbjct: 224 LWLDKYRPQSFLDLLSDERINREVLSWIKSWDRFVFPKKKRPNGV--HPVPPA-KTNANKAPW---------------------------NQELSQNPSNGNAVEDDEDKRPFN--KIILICGPPGAGKTTLANIVARHAGYNPIEVNASDDRTASVLRNKIISAMEMQSIWGERKPNCIILDEIDGAMNGSDGKSAIEVIQEIVNAPLQR-----KKAAAKTAAKNRHPLTRPLICICNDLYASVLRPLRQMAKIFTLDAPHSQRLVTRLKYICRHEGIKASTGVLATLCSSADNDIRYCLNTLQF---QTTQSRGKSA---------VVTLSTGLVAH-----KDHVHGMFEALDLVFYEARSKSAKGDVPV----------------------------------TEKIDEAAASLGNFPLLINGLDENVPKMIFNDPTMNKICDVFEWLGLADEYEYRARSEQQYAFQAYIPFAAIATHAACCTSSRRRVEYPRAQFEAQKRRDRSENILTALTEGAQLQPILRMSTSVLVVDVIPWLVASLSPNIRRINLSLQTKEEKLMIQRLIQLMASLGLSFRHKYR------PDGSED-YALEPALNELVEFRSSEGGAAYQS-------------MLPMAVRKMIAREVELEQMRRNEKSSPSTKQNNSKASTVKV--XXXXXXXIEEKAAKAAYVLPELS 814
BLAST of NO28G00820 vs. NCBI_GenBank
Match: ETM00845.1 (hypothetical protein L917_02478 [Phytophthora parasitica]) HSP 1 Score: 299.7 bits (766), Expect = 4.200e-77 Identity = 222/701 (31.67%), Postives = 323/701 (46.08%), Query Frame = 0 Query: 434 LWVNRYSPSAFPHLLSDEATNREVLRLLRSWDEFVF-KRAVPKTLAEAPAQPAWKTNWXXXXXXXXXXXXXXXXXXXXXXXXXXNPMLTPRERASMDAEREAAAVQRRDKRPKEQARAILLCGPPGMGKTTLAHVVAAHCGYRPLEFNASDDRSAAVLQEKITRAMQNQAVLGDKRPNCIILDEADGI----DGKTGIKMIVDMIKAPLKSDAAGGKKKSGGDGSASVPALTRPLICICNDLYAPQLRPLRDVATVFRFRKTSSTRLLQRLKTICLAESLPLESTALGALCEAAGNDVRSCLNTLQFFKSRVPQPTGGEAAGGVGQAARASALSRQLMQHIGAGLKDQEKDMLQVCNAIFRKPQAKTSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRDTDMVISTVAAFSDHGQVLQAAHENFCQMRYTDPNLTKTALAAEWLAFSDLIHGRQLEGRCHLMEDLHLATAAAIHLLCRVEVRPRITLPRKDYEFRSARLSRQHILQSFTEGCVLQALWARHPAAIVLDVVSPLVHILNPSLRPINPDLYSFAEKAMLRQLVGVMMACGVSFMHTNRAGLYSHQQGAHDPLEMVPMLVHLAEFGLSNDGSGAPKDEALPVQRPRPARVLPTFVKLLATQEAKLEVMKQAE---------CRKADAIKARHGGVLPTALNKKAERPGHALPSFS 1121 LW+++Y P +F LLSDE NREVL ++SWD FVF K+ P + P PA KTN + S + A DKRP + IL+CGPPG GKTTLA++VA H GY P+E NASDDR+A+VL+ KI AM+ Q++ G+++PNCIILDE DG DGK+ I++I +++ APL+ KK + + + LTRPLICICNDLYA LRPLR +A +F S RL+ RLK IC E + + L LC +A ND+R CLNTLQF + Q G A LS L+ H KD M + + +F + ++K++ T+ + A+ + ++ EN +M + DP + K EWL +D R + + + A A H C R R+ PR +E + R ++IL + TEG LQ + + +V+DV+ LV L+P++R IN L + EK M+++L+ +M + G+SF H R G+ D + P L L EF S G+ +LP V+ + +E +LE M++ E KA +K + +KA + + LP S Sbjct: 39 LWLDKYRPQSFLDLLSDERINREVLSWIKSWDRFVFPKKKRPNGV--HPVPPA-KTNANKAPW---------------------------NQELSQNPSNGNAVEDDEDKRPFN--KIILICGPPGAGKTTLANIVARHAGYNPIEVNASDDRTASVLRNKIISAMEMQSIWGERKPNCIILDEIDGAMNGSDGKSAIEVIQEIVNAPLQR-----KKAAAKTAAKNRHPLTRPLICICNDLYASVLRPLRQMAKIFTLDAPHSQRLVTRLKYICRHEGIKASTGVLATLCSSADNDIRYCLNTLQF---QTTQSRGKSA---------VVTLSTGLVAH-----KDHVHGMFEALDLVFYEARSKSAKGDVPV----------------------------------TEKIDEAAASLGNFPLLINGLDENVPKMIFNDPTMNKICDVFEWLGLADEYEYRARSEQQYAFQAYIPFAAIATHAACCTSSRRRVEYPRAQFEAQKRRDRSENILTALTEGAQLQPILRMSTSVLVVDVIPWLVASLSPNIRRINLSLQTKEEKLMIQRLIQLMASLGLSFRHKYR------PDGSED-YALEPALNELVEFRSSEGGAAYQS-------------MLPMAVRKMIAREVELEQMRRNEKSSPSTKQNNSKASTVKV--XXXXXXXIEEKAAKAAYVLPELS 629
BLAST of NO28G00820 vs. NCBI_GenBank
Match: XP_024577255.1 (chromosome transmission fidelity protein 18 homolog isoform x1 [Plasmopara halstedii] >CEG40886.1 chromosome transmission fidelity protein 18 homolog isoform x1 [Plasmopara halstedii]) HSP 1 Score: 298.9 bits (764), Expect = 7.200e-77 Identity = 217/707 (30.69%), Postives = 325/707 (45.97%), Query Frame = 0 Query: 434 LWVNRYSPSAFPHLLSDEATNREVLRLLRSWDEFVFKR--------AVPKTLAEAPAQPAWKTNWXXXXXXXXXXXXXXXXXXXXXXXXXXNPMLTPRERASMDAEREAAAVQRRDKRPKEQARAILLCGPPGMGKTTLAHVVAAHCGYRPLEFNASDDRSAAVLQEKITRAMQNQAVLGDKRPNCIILDEAD----GIDGKTGIKMIVDMIKAPLKSDAAGGKKKSGGDGSA-SVPALTRPLICICNDLYAPQLRPLRDVATVFRFRKTSSTRLLQRLKTICLAESLPLESTALGALCEAAGNDVRSCLNTLQFFKSRVPQPTGGEAAGGVGQAARASALSRQLMQHIGAGLKDQEKDMLQVCNAIFRKPQAKTSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRDTDMVISTVAAFSDHGQVLQAAHENFCQMRYTDPNLTKTALAAEWLAFSDLIHGRQLEGRCHLMEDLHLATAAAIHLLCRVEVRPRITLPRKDYEFRSARLSRQHILQSFTEGCVLQALWARHPAAIVLDVVSPLVHILNPSLRPINPDLYSFAEKAMLRQLVGVMMACGVSFMHTNRAGLYSHQQGAHDPLEMVPMLVHLAEFGLSNDGSGAPKDEALPVQRPRPARVLPTFVKLLATQEAKLEVMKQAECRKADAIKARHGGVLPTA-------LNKKAERPGHALPSFS 1121 LW+++Y P +F LLSDE TNREVL ++SWD FVF + + L Q W P + S D + E DKRP + IL+CGPPG GKTTLA++VA H GY P+E NASDDR+A+VL+ KI AM+ Q++ G++RPNCIILDE D G DGK+ I +I +++ APL+ KKKSGG + LTRPLICICNDLYA LRPLR ++ +F S RL+ RLK IC E + + + AL ALC +A ND+R CLNTLQF +R +R + +S+ + + KD M +V + +F + ++ + + VA+ + ++ EN +M + DP L EWL +D R + + A A H C R R+ PR +E + + ++IL + +EG LQ + + +V+DVV L+ L+P++R INP L + E+ M+++L+ +M + G+SF H + E+ P L + +F S E VQ+ +LP V+ + +E +LE M+++E + + G+ + + +KA +ALP S Sbjct: 227 LWLDKYRPRSFLDLLSDERTNREVLSWIKSWDRFVFPKKKHFNGAHLAKQILTGTLDQSQWNKE--------------------------------PTKSDSTDGDDE-------DKRP--LIKIILICGPPGSGKTTLANIVARHAGYNPIEVNASDDRTASVLRNKIVSAMEMQSIWGERRPNCIILDEIDGAMNGTDGKSAIDVIKEIVNAPLQ------KKKSGGKSVVKNRHPLTRPLICICNDLYASVLRPLRQISKIFTLDSPHSQRLVSRLKYICRNEGIKVSTGALAALCSSAENDIRYCLNTLQFQSTR----------------SRGAVMSKLTLSNGLVAQKDHVHGMFEVLDLVFYEARSNMKKGEIPA----------------------------------AEKISEAVASIGNFPLLISGLDENVPRMIFNDPTLKNICDVFEWLGLADEYETRARSDQQFFFQAYIEFAAIATHRSCCTSSRRRVEYPRAQFEAQKRQDRCENILVALSEGAHLQPIVRVGTSVLVVDVVPCLIASLSPNIRRINPSLQTKKEQIMIQRLIELMASLGLSFCH-------KFLPDGTEDYELEPALYEIVKFQSS---------EGTAVQQ----SMLPLSVRKMIAREVELEQMRRSENKSPSVNNNDNRGLHSVSKQSDKVTIEEKAANATYALPKLS 816 The following BLAST results are available for this feature:
BLAST of NO28G00820 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO28G00820 ID=NO28G00820|Name=NO28G00820|organism=Nannochloropsis oceanica|type=gene|length=4002bpback to top protein sequence of NO28G00820.1 >NO28G00820.1-protein ID=NO28G00820.1-protein|Name=NO28G00820.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1230bpback to top Synonyms
Publications
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