NO28G00700, NO28G00700 (gene) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO28G00700
Unique Name	NO28G00700
Type	gene
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	3678
Alignment location	chr28:238179..241856 -

Link to JBrowse

Properties


Property Name	Value
Description	Delta-6 desaturase

Mutants

Expression

Analysis:

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr28	genome	chr28:238179..241856 -

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
PRJNA769958	2024-08-13
GSE178672	2023-12-15
PRJNA933693	2023-10-26
PRJNA943449	2023-07-19
GSE149904	2020-10-10
NoIMET1_WT_HS	2020-09-29
GSE139615	2020-03-11
PRJNA241382	2020-03-11
BLASTP analysis of N. oceanica IMET1 genes	2019-07-11
InterPro analysis for N. oceanica IMET1 genes	2019-07-11
GO annotation for IMET1v2 genes	2019-07-10
PRJNA182180	2019-04-25
Gene prediction for N. oceanica IMET1	2017-10-24

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0006629	lipid metabolic process
GO:0006629	lipid metabolic process

Vocabulary: **INTERPRO**
Term	Definition
IPR036400	Cyt_B5-like_heme/steroid_sf
IPR005804	Fatty_acid_desaturase-1
IPR001199	Cyt_B5-like_heme/steroid-bd

Vocabulary: **Cellular Component**
Term	Definition
GO:0016020	membrane

Vocabulary: **Molecular Function**
Term	Definition
GO:0003824	catalytic activity

Homology

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BLAST of NO28G00700 vs. NCBI_GenBank
Match: AQX92135.1 (delta-6 fatty acid desaturase [Nannochloropsis oceanica])

HSP 1 Score: 996.1 bits (2574), Expect = 3.700e-287
Identity = 473/474 (99.79%), Postives = 474/474 (100.00%), Query Frame = 0

Query:    1 MGRGGERVETTESLSFTADKAGTIKQRGGKITWDEVRQHKTPQDAWLVYRNKVYDVSGWQDHPGGNVIFTHAGGDCTDIFAAFHPLGATSYLDPFYIGELEPGSDKKPAAQANFERAYRDLRGKLIAGGFFKANPLYYVWKVVSTVALAVGAWMLVAWSQNLGVQMLSAFLVALFWQQCGWLAHDFLHHQVFKNRALGDLAGIVIGNVFQGFSVAWWKNKHNTHHAVPNLVESSPDAQDGDPDIDTMPILAWSLKMADRAQQYSWGPFFVRHQSLLYFPILLVARISWLMQSFLFVFDSVPGASLWATKGATAERQAIKNVGLEKVGLVAHYLWYGALMLCHMSLARALLYFLASQMMCGFLLALVFGLGHNGMAVYDADARPDFWKLQVTTTRNVTGSWLVQWFCGGLGYQVDHHLFPMIPRHRLGKLHGLVEGFCKDHGVKYHETNMWEGTKEVLAHLSSVTKEFVADFPAM 475
            MGRGGERVETTESLSFTADKAGTIKQRGGKITWDEVRQHKTPQDAWLVYRNKVYDVSGWQDHPGGNVIFTHAGGDCTDIFAAFHPLGATSYLDPFYIGELEPGSDKKPAAQANFERAYRDLRGKLIAGGFFKANPLYYVWKVVSTVALAVGAW+LVAWSQNLGVQMLSAFLVALFWQQCGWLAHDFLHHQVFKNRALGDLAGIVIGNVFQGFSVAWWKNKHNTHHAVPNLVESSPDAQDGDPDIDTMPILAWSLKMADRAQQYSWGPFFVRHQSLLYFPILLVARISWLMQSFLFVFDSVPGASLWATKGATAERQAIKNVGLEKVGLVAHYLWYGALMLCHMSLARALLYFLASQMMCGFLLALVFGLGHNGMAVYDADARPDFWKLQVTTTRNVTGSWLVQWFCGGLGYQVDHHLFPMIPRHRLGKLHGLVEGFCKDHGVKYHETNMWEGTKEVLAHLSSVTKEFVADFPAM
Sbjct:    1 MGRGGERVETTESLSFTADKAGTIKQRGGKITWDEVRQHKTPQDAWLVYRNKVYDVSGWQDHPGGNVIFTHAGGDCTDIFAAFHPLGATSYLDPFYIGELEPGSDKKPAAQANFERAYRDLRGKLIAGGFFKANPLYYVWKVVSTVALAVGAWVLVAWSQNLGVQMLSAFLVALFWQQCGWLAHDFLHHQVFKNRALGDLAGIVIGNVFQGFSVAWWKNKHNTHHAVPNLVESSPDAQDGDPDIDTMPILAWSLKMADRAQQYSWGPFFVRHQSLLYFPILLVARISWLMQSFLFVFDSVPGASLWATKGATAERQAIKNVGLEKVGLVAHYLWYGALMLCHMSLARALLYFLASQMMCGFLLALVFGLGHNGMAVYDADARPDFWKLQVTTTRNVTGSWLVQWFCGGLGYQVDHHLFPMIPRHRLGKLHGLVEGFCKDHGVKYHETNMWEGTKEVLAHLSSVTKEFVADFPAM 474

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BLAST of NO28G00700 vs. NCBI_GenBank
Match: ADM86708.1 (delta-6 desaturase [Nannochloropsis oculata])

HSP 1 Score: 991.1 bits (2561), Expect = 1.200e-285
Identity = 470/474 (99.16%), Postives = 473/474 (99.79%), Query Frame = 0

Query:    1 MGRGGERVETTESLSFTADKAGTIKQRGGKITWDEVRQHKTPQDAWLVYRNKVYDVSGWQDHPGGNVIFTHAGGDCTDIFAAFHPLGATSYLDPFYIGELEPGSDKKPAAQANFERAYRDLRGKLIAGGFFKANPLYYVWKVVSTVALAVGAWMLVAWSQNLGVQMLSAFLVALFWQQCGWLAHDFLHHQVFKNRALGDLAGIVIGNVFQGFSVAWWKNKHNTHHAVPNLVESSPDAQDGDPDIDTMPILAWSLKMADRAQQYSWGPFFVRHQSLLYFPILLVARISWLMQSFLFVFDSVPGASLWATKGATAERQAIKNVGLEKVGLVAHYLWYGALMLCHMSLARALLYFLASQMMCGFLLALVFGLGHNGMAVYDADARPDFWKLQVTTTRNVTGSWLVQWFCGGLGYQVDHHLFPMIPRHRLGKLHGLVEGFCKDHGVKYHETNMWEGTKEVLAHLSSVTKEFVADFPAM 475
            MGRGGERVETTESLSFTADKAGTIKQRGGKITWDEVRQHKTPQDAWLVYRNKVYDVSGWQDHPGGNVIFTHAGGDCTDIFAAFHPLGATSYLDPFYIGELEPGSD+KPAAQANFERAYRDLRGKLIAGGFFKANPLYYVWKVVSTVALAVGAW+LVAWSQNLGVQMLSAFLVALFWQQCGWLAHDFLHHQVFKNRALGDLAGIVIGNVFQGFSVAWWKNKHNTHHAVPNLVESSPDAQDGDPDIDTMPILAWSLKMADRAQQYSWGPFFVRHQSLLYFPILLVARISWLMQSFLFVFDSVPGASLWATKGATAERQAIKNVGLEKVGLVAHYLWYGALMLCHMSLARALLYFLASQMMCGFLLALVFGLGHNGMAVYDADARPDFWKLQVTTTR+VTGSWLVQWFCGGLGYQVDHHLFPMIPRHRLGKLHGLVEGFCKDHGVKYHETNMWEGTKEVLAHLSSVTKEFVADFP M
Sbjct:    1 MGRGGERVETTESLSFTADKAGTIKQRGGKITWDEVRQHKTPQDAWLVYRNKVYDVSGWQDHPGGNVIFTHAGGDCTDIFAAFHPLGATSYLDPFYIGELEPGSDRKPAAQANFERAYRDLRGKLIAGGFFKANPLYYVWKVVSTVALAVGAWVLVAWSQNLGVQMLSAFLVALFWQQCGWLAHDFLHHQVFKNRALGDLAGIVIGNVFQGFSVAWWKNKHNTHHAVPNLVESSPDAQDGDPDIDTMPILAWSLKMADRAQQYSWGPFFVRHQSLLYFPILLVARISWLMQSFLFVFDSVPGASLWATKGATAERQAIKNVGLEKVGLVAHYLWYGALMLCHMSLARALLYFLASQMMCGFLLALVFGLGHNGMAVYDADARPDFWKLQVTTTRSVTGSWLVQWFCGGLGYQVDHHLFPMIPRHRLGKLHGLVEGFCKDHGVKYHETNMWEGTKEVLAHLSSVTKEFVADFPPM 474

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BLAST of NO28G00700 vs. NCBI_GenBank
Match: EWM20915.1 (delta-6 fatty acid desaturase [Nannochloropsis gaditana])

HSP 1 Score: 909.8 bits (2350), Expect = 3.500e-261
Identity = 421/475 (88.63%), Postives = 451/475 (94.95%), Query Frame = 0

Query:    1 MGRGGERVETTESL-SFTADKAGTIKQRGGKITWDEVRQHKTPQDAWLVYRNKVYDVSGWQDHPGGNVIFTHAGGDCTDIFAAFHPLGATSYLDPFYIGELEPGSDKKPAAQANFERAYRDLRGKLIAGGFFKANPLYYVWKVVSTVALAVGAWMLVAWSQNLGVQMLSAFLVALFWQQCGWLAHDFLHHQVFKNRALGDLAGIVIGNVFQGFSVAWWKNKHNTHHAVPNLVESSPDAQDGDPDIDTMPILAWSLKMADRAQQYSWGPFFVRHQSLLYFPILLVARISWLMQSFLFVFDSVPGASLWATKGATAERQAIKNVGLEKVGLVAHYLWYGALMLCHMSLARALLYFLASQMMCGFLLALVFGLGHNGMAVYDADARPDFWKLQVTTTRNVTGSWLVQWFCGGLGYQVDHHLFPMIPRHRLGKLHGLVEGFCKDHGVKYHETNMWEGTKEVLAHLSSVTKEFVADFPAM 475
            MGRGGERVET ES+ +++A K+G I+Q GGKITWDEVRQHKTPQDAWLVYRNKVYDVSGWQDHPGGNVIFTHAGGDCTDIFAAFHPLGATSY+DPFYIGEL PGSDKKP AQA+FERAYRDLRGKLI GGFFKA+PLYYVWKVVSTVALAVGAWMLV WSQ L +QMLSAF++ALFWQQCGWLAHDFLHHQVFK RA GDLAGI+IGNVFQGFSVAWWKNKHNTHHAVPNLVESSPDAQDGDPDIDTMPILAWSLKMADRA++YSWGPFF+RHQ+ LYFPILLVARISWL+QSFLFVF+ VPGASLWATKGAT ERQAIKNVGLEK GL+ +YLWYGALM C+MSL R L+YF+ASQMMCGFLLALVFGLGHNGMAVYDADARPDFWKLQVTTTRNVTG WL+QWFCGGLGYQVDHHLFPMIPRHRLG+LHGLVE FCK+HGVKYHET+MWEGT+EVLAHL+SVTKEFV DFPAM
Sbjct:    1 MGRGGERVETQESIATYSASKSGDIRQHGGKITWDEVRQHKTPQDAWLVYRNKVYDVSGWQDHPGGNVIFTHAGGDCTDIFAAFHPLGATSYMDPFYIGELVPGSDKKPEAQASFERAYRDLRGKLITGGFFKASPLYYVWKVVSTVALAVGAWMLVGWSQALSIQMLSAFILALFWQQCGWLAHDFLHHQVFKERAYGDLAGIMIGNVFQGFSVAWWKNKHNTHHAVPNLVESSPDAQDGDPDIDTMPILAWSLKMADRAKEYSWGPFFLRHQAFLYFPILLVARISWLLQSFLFVFEHVPGASLWATKGATTERQAIKNVGLEKAGLLLYYLWYGALMFCNMSLTRVLIYFVASQMMCGFLLALVFGLGHNGMAVYDADARPDFWKLQVTTTRNVTGGWLIQWFCGGLGYQVDHHLFPMIPRHRLGQLHGLVESFCKEHGVKYHETSMWEGTREVLAHLASVTKEFVTDFPAM 475

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BLAST of NO28G00700 vs. NCBI_GenBank
Match: ALG35825.1 (delta 6 fatty acid desaturase [Isochrysis sp. SKMKUIso1])

HSP 1 Score: 730.7 bits (1885), Expect = 2.900e-207
Identity = 359/417 (86.09%), Postives = 367/417 (88.01%), Query Frame = 0

Query:   35 EVRQHKTPQDAWLVYRNKVYDVSGWQDHPGGNVIFTHAGGDCTDIFAAFHPLGATSYLDPFYIGELEPGSDKKPAAQANFERAYRDLRGKLIAGGFFKANPLYYVWKVVSTVALAVGAWMLVAWSQNLGVQMLSAFLVALFWQQCGWLAHDFLHHQ-VFKNRALGDLAGIVIGNVFQGFSVAWWKNKHNTHHAVPNLVESSPDAQDGDPDIDTMPILA-WSLKMADRAQQYSWGPFFVRHQSLLYFPILLVARISWLMQSFLFVFDSVPGASLWATKGATAERQAIKNVGLEKVGLVAHYLWYGALMLCHMSLARALLYFLASQMMCGFLLALVFGLGHNGMAVYDADARPDFWKLQVTTTRNVTGSWLVQWFCGGLGYQVDHHLFPMIPRHRLGKLHGLVEGFCKDHGVKYHETNM 450
            +VRQHKTPQDAWLVYRNKVYDVSGWQDHPGGNVIFTHAGGDCTDIFAAFHPLGATSYLDPFYIGELEPGSDKKPAAQANFERAYRDLRGKLIAGGFFKANPLYYVWKVVSTVALAVGAWMLVAWSQNLGVQMLSAFLVALFWQQCGW+ HDFLH   +++    GDLAGIVIG            + HNTHH               DPDIDTMPI      +      +YSWGPFFVRHQSLLYFPILLVA ISWLMQSFLFVFDSVPGASLWATKGATAERQAIKNVGLEKVGLVAHYLWYGALMLCHMSLARALLYFLASQMMCGFLLALVFGLGHNGMAVYDADARPDFWKLQVTTTRNVTGSWLVQWFCGGLGYQVDHHLFPMIPRHRLGKLHGLVEG CKDHGVKYHETNM
Sbjct:   86 QVRQHKTPQDAWLVYRNKVYDVSGWQDHPGGNVIFTHAGGDCTDIFAAFHPLGATSYLDPFYIGELEPGSDKKPAAQANFERAYRDLRGKLIAGGFFKANPLYYVWKVVSTVALAVGAWMLVAWSQNLGVQMLSAFLVALFWQQCGWVGHDFLHPPGIYEPVRWGDLAGIVIGT----------SSSHNTHHM----------GGKEDPDIDTMPIPGPGRSRWPTGRSKYSWGPFFVRHQSLLYFPILLVAWISWLMQSFLFVFDSVPGASLWATKGATAERQAIKNVGLEKVGLVAHYLWYGALMLCHMSLARALLYFLASQMMCGFLLALVFGLGHNGMAVYDADARPDFWKLQVTTTRNVTGSWLVQWFCGGLGYQVDHHLFPMIPRHRLGKLHGLVEGLCKDHGVKYHETNM 482

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BLAST of NO28G00700 vs. NCBI_GenBank
Match: CBN74970.1 (delta-6 fatty acid desaturase [Ectocarpus siliculosus])

HSP 1 Score: 599.4 bits (1544), Expect = 1.000e-167
Identity = 283/443 (63.88%), Postives = 338/443 (76.30%), Query Frame = 0

Query:   34 DEVRQHKTPQDAWLVYRNKVYDVSGWQDHPGGNVIFTHAGGDCTDIFAAFHPLGATSYLDPFYIGEL-EPGSDKKPAAQANFERAYRDLRGKLIAGGFFKANPLYYVWKVVSTVALAVGAWMLVAWSQNLGVQMLSAFLVALFWQQCGWLAHDFLHHQVFKNRALGDLAGIVIGNVFQGFSVAWWKNKHNTHHAVPNLVESSPDAQDGDPDIDTMPILAWSLKMADRAQQYSWGPFFVRHQSLLYFPILLVARISWLMQSFLFVFDSVPGASLWATKGA-TAERQAIKNVGLEKVGLVAHYLWYGALMLCHMSLARALLYFLASQMMCGFLLALVFGLGHNGMAVYDADARPDFWKLQVTTTRNVTGSWLVQWFCGGLGYQVDHHLFPMIPRHRLGKLHGLVEGFCKDHGVKYHETNMWEGTKEVLAHLSSVTKEFVADFPAM 475
            +EV++H+TP DAW++YRNKVYDVSGW +HPGGNVIFTHAG D TDIFAAFHP  A + L+PFYIG+L E  +  KPAAQ  FER+YR+LR KL+  G + ++P YYV      +AL   +   V WS    V ML A L+A+FWQQCGWLAHDFLHHQVFKNRA GDLAG+  GN+ QGFSV WWKNKHNTHHAVPNL ESS DA DGDPD+DTMP+LAWS+KMA+ A+  +   F + HQ+ LYFPILL+AR+SW+MQSFLFVF+ +PGA+LW TKGA T   +++ N  LE   L+ H +W   L   ++   ++L +F  +Q  CG  LALVFGLGHNGMA YDADARPDFWKLQVTTTRNVT +  V WFCGGL YQVDHHLFP IPRH L K+H LVE FCK H V YHE +MWEGTKEVL+HLS V+ EF+A+FPAM
Sbjct:   24 EEVQKHRTPSDAWMIYRNKVYDVSGWHEHPGGNVIFTHAGDDFTDIFAAFHPPTAYAVLEPFYIGDLDEKSAVAKPAAQRAFERSYRELRSKLLTMGMYNSDPWYYVMVCSRQMALWAASVACVVWSDRWDVNMLGACLMAVFWQQCGWLAHDFLHHQVFKNRAYGDLAGVFWGNLMQGFSVGWWKNKHNTHHAVPNLHESSADAHDGDPDMDTMPVLAWSIKMAEAAKDTTVSRFLIGHQAFLYFPILLIARVSWVMQSFLFVFNGLPGANLWTTKGADTFVPKSLAN-KLESPALIGHLVWMSYLAF-NLGFVKSLAFFAVAQCGCGLFLALVFGLGHNGMATYDADARPDFWKLQVTTTRNVTSTPFVDWFCGGLQYQVDHHLFPQIPRHNLRKVHTLVESFCKQHDVHYHEASMWEGTKEVLSHLSDVSAEFIAEFPAM 464

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BLAST of NO28G00700 vs. NCBI_GenBank
Match: AAU11444.1 (fatty acid desaturase [Glossomastix chrysoplasta] >AAU11445.1 fatty acid desaturase [Glossomastix chrysoplasta])

HSP 1 Score: 550.1 bits (1416), Expect = 7.000e-153
Identity = 265/449 (59.02%), Postives = 331/449 (73.72%), Query Frame = 0

Query:   30 KITWDEVRQHKTPQDAWLVYRNKVYDVSGWQDHPGGNVIFTHAGGDCTDIFAAFHPLGATSYLDPFYIGELE-PGSD---KKPAAQANFERAYRDLRGKLIAGGFFKANPLYYVWKVVSTVALAVGAWMLVAWSQNLGVQMLSAFLVALFWQQCGWLAHDFLHHQVFKNRALGDLAGIVIGNVFQGFSVAWWKNKHNTHHAVPNLVESSPDAQDGDPDIDTMPILAWSLKMADRAQQYSWGPFFVRHQSLLYFPILLVARISWLMQSFLFVFDSVPGASLWATKGATAERQAIKNVGLEKVGLVAHYLWYGALMLCHMSLARALLYFLASQMMCGFLLALVFGLGHNGMAVYDADARPDFWKLQVTTTRNVTGSWLVQWFCGGLGYQVDHHLFPMIPRHRLGKLHGLVEGFCKDHGVKYHETNMWEGTKEVLAHLSSVTKEFVADFPAM 475
            K T +E+++H+TPQDAW+V+ NKVYDVS + DHPGG VIF+HAG D TD+FAAFHP  A +++D F IG ++  GS    +K A+QA+FE+AYR+LR +L   G FKA+ L+Y +KV+ST+AL + +W LV  S + GV ++ A  +ALFWQQCGWLAHDFLHHQVF+NRA GDLAGI+IGNV+QGFSVAWWKNKHNTHH+VPNL ES PDA DGDPDIDTMP+LAWSL+MA  A   +   +FV HQ+  YFPIL +AR+SWL  SF FVF +      W TK     +Q + N  LE+ GL+ HY W  AL  C  SL RAL +             +VFGLGHNGMA+Y+A+ARPDFWKLQVTTTRN+TGS  V WFCGGL +QV+HHLFP +PRH L + H +V  FCK+ GVKYHE ++  GTKE+L+ LS VT EF+ +FPAM
Sbjct:   21 KFTLEEIQKHRTPQDAWMVHHNKVYDVSNYMDHPGGLVIFSHAGDDMTDVFAAFHPPSAFNFMDKFLIGVVDSKGSSPQLQKDASQASFEKAYRNLRVQLKKAGMFKASSLFYTYKVLSTLALCLVSWGLVLGSDHFGVHLVGALFLALFWQQCGWLAHDFLHHQVFQNRAHGDLAGIMIGNVWQGFSVAWWKNKHNTHHSVPNLYESQPDAADGDPDIDTMPLLAWSLRMAKNADN-ALSRWFVSHQAFCYFPILGLARLSWLEGSFSFVFSN---PLAWKTKNLDVAKQLVTNPLLEQAGLLVHYAWVFALCACTGSLVRALAFXXXXXXXXXXXXXIVFGLGHNGMALYEANARPDFWKLQVTTTRNITGSPFVHWFCGGLQFQVEHHLFPSLPRHNLPRAHEIVTAFCKEQGVKYHEADLLTGTKEILSCLSEVTTEFLDEFPAM 465

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BLAST of NO28G00700 vs. NCBI_GenBank
Match: XP_002291529.1 (probable microsomal delta-6 desaturase [Thalassiosira pseudonana CCMP1335] >AAX14505.1 delta-6 fatty acid desaturase [Thalassiosira pseudonana] >EED91636.1 probable microsomal delta-6 desaturase [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 511.9 bits (1317), Expect = 2.100e-141
Identity = 260/494 (52.63%), Postives = 332/494 (67.21%), Query Frame = 0

Query:    1 MGRGGERVETTESLSFTADKAGTIK--QRGGKITWDEVRQHKTPQDAWLVYRNKVYDVSGWQDHPGGNVIFTHAGGDCTDIFAAFHPLGATSYLDPFYIGELEPGS-DKKPAAQANFERAYRDLRGKLIAGGFFKANPLYYVWKVVSTVALAVGAWMLVAWSQNLGVQMLSAFLVALFWQQCGWLAHDFLHHQVFKNRALGDLAGIVIGNVFQGFSVAWWKNKHNTHHAVPNLVESSPDAQDGDPDIDTMPILAWSLKMADRAQQYSWG------PFFVRHQSLLYFPILLVARISWLMQSFLFVFDSVPGASLWATKGATAERQAIKNVGLEKVGLVAHYLWYGALM--LCHMSLARALLYFLASQMMCGFLLALVFGLGHNGMAVYDADARPDFWKLQVTTTRNVTG-----SWLVQWFCGGLGYQVDHHLFPMIPRHRLGKLHGLVEGFCKDHGVKYHETNMWEGTKEVLAHLSSVTKEF----VADFPAM 475
            MG+GG+    T+       ++G +K  ++  K TW EV++H TP DAW+V++NKVYDVS W DHPGG V+FTHAG D TDIFAAFH  G+ + +  FYIG+L P S + K   Q +FE+ YRDLR KL+  G FK++ +YY +K    + + + A  +V +S +L + + SA L+ LFWQQCGWLAHDFLHHQVFK R  GDL GI  G++ QGFS+ WWKNKHN HHAVPNL  SS D+QDGDPDIDTMP+LAWSLK A   ++ + G       + ++ Q+  YFPILL+ARISWL +SF   F    GA+    K    E++ ++   LEK+G+  HY W   L       SL  +++YF  +    G  LALVFGLGHNGM+VYDA  RPDFW+LQVTTTRN+ G      + V WFCGGL YQVDHHLFPM+PR+ + K H LVE FCK+ GVKYHE +MW+GT EVL HLS V+ +F    V DFPAM
Sbjct:    1 MGKGGDAAAATK-------RSGALKLAEKPQKYTWQEVKKHITPDDAWVVHQNKVYDVSNWYDHPGGAVVFTHAGDDMTDIFAAFHAQGSQAMMKKFYIGDLIPESVEHKDQRQLDFEKGYRDLRAKLVMMGMFKSSKMYYAYKCSFNMCMWLVAVAMVYYSDSLAMHIGSALLLGLFWQQCGWLAHDFLHHQVFKQRKYGDLVGIFWGDLMQGFSMQWWKNKHNGHHAVPNLHNSSLDSQDGDPDIDTMPLLAWSLKQAQSFREINKGKDSTFVKYAIKFQAFTYFPILLLARISWLNESFKTAFGL--GAASENAK-LELEKRGLQYPLLEKLGITLHYTWMFVLSSGFGRWSLPYSIMYFFTATCSSGLFLALVFGLGHNGMSVYDATTRPDFWQLQVTTTRNIIGGHGIPQFFVDWFCGGLQYQVDHHLFPMMPRNNIAKCHKLVESFCKEWGVKYHEADMWDGTVEVLQHLSKVSDDFLVEMVKDFPAM 484

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BLAST of NO28G00700 vs. NCBI_GenBank
Match: EJK45829.1 (hypothetical protein THAOC_35538 [Thalassiosira oceanica])

HSP 1 Score: 510.0 bits (1312), Expect = 8.000e-141
Identity = 258/462 (55.84%), Postives = 315/462 (68.18%), Query Frame = 0

Query:   30 KITWDEVRQHKTPQDAWLVYRNKVYDVSGWQDHPGGNVIFTHAGGDCTDIFAAFHPLGATSYLDPFYIGELEPGSDKKPAAQANFERAYRDLRGKLIAGGFFKANPLYYVWKVVSTVALAVGAWMLVAWSQNLGVQMLSAFLVALFWQQCGWLAHDFLHHQVFKNRALGDLAGIVIGNVFQGFSVAWWKNKHNTHHAVPNLVESSPDAQDGDPDIDTMPILAWSLKMAD--RAQQYSWGPFFV----RHQSLLYFPILLVARISWLMQSFLFVFDSVPGASLWATKGATAERQAIKNVGLEKVGLVAHYLWYGALM--LCHMSLARALLYFLASQMMCGFLLALVFGLGHNGMAVYDADARPDFWKLQVTTTRNVTG-----SWLVQWFCGGLGYQVDHHLFPMIPRHRLGKLHGLVEGFCKDHGVKYHETNMWEGTKEVLAHLSSVTKEFVA----DFPAM 475
            K TWDEV++H TP DAW+VY NKVYDVSGW DHPGG VIFTHAG D TDIFAAFH  G+ + +  FYIG+L   S KK   Q +FE+ YRDLR KL+  G FKA+  +Y +K +  + + + A  +V +S +  V + SA L+ LFWQQCGWLAHDFLHHQVFK+R  GDLAGI  G++ QG+S+ WWKNKHN HHAV NL  SS ++ DGDPDIDTMP+LAWSLK A   RA        FV    R Q+  YFPILL+ARISWL +SF   +    GAS  A   A  ER+ ++   LEKVG+  HY W   L       S+  +++YF  +   CGF LA VFGLGHNGM+VYDA+ RPDFW LQVTTTRN+ G      + V WFCGGL YQV+HHLFPMIPRH   K+H LV+ FCK+ GVKYHE +M +GT EVL HL +V+ +F+     DFPAM
Sbjct:   26 KYTWDEVKKHITPDDAWVVYHNKVYDVSGWYDHPGGGVIFTHAGDDMTDIFAAFHAQGSQAMIKKFYIGDLIVESTKKDQRQIDFEKGYRDLRAKLVMMGMFKASKGFYAYKCLFNMCMWLTAVAMVYFSDSTAVHVGSALLLGLFWQQCGWLAHDFLHHQVFKHRKYGDLAGIFWGDLMQGYSMQWWKNKHNGHHAVTNLHNSSLESLDGDPDIDTMPLLAWSLKQAQSFRAANNGKDTAFVRTAIRFQAFTYFPILLLARISWLNESFKTAYGI--GAST-ANAKAEMERKGLQYPLLEKVGIALHYTWMAILTTGFGQWSIPYSMMYFFTATCSCGFFLATVFGLGHNGMSVYDAETRPDFWNLQVTTTRNIIGGHGIPQFFVDWFCGGLQYQVEHHLFPMIPRHNAAKVHKLVDSFCKEWGVKYHEADMIDGTMEVLRHLQNVSDDFIVEMIKDFPAM 484

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BLAST of NO28G00700 vs. NCBI_GenBank
Match: BAO27781.1 (delta6 desaturase-b [Fistulifera solaris] >GAX27437.1 Delta8-fatty-acid desaturase [Fistulifera solaris])

HSP 1 Score: 508.8 bits (1309), Expect = 1.800e-140
Identity = 264/488 (54.10%), Postives = 327/488 (67.01%), Query Frame = 0

Query:    1 MGRGGERVETTESLSFTADKAGTIKQRGGKITWDEVRQHKTPQDAWLVYRNKVYDVSGWQDHPGGNVIFTHAGGDCTDIFAAFHPLGATSYLDPFYIGELEPGSDK-KPAAQANFERAYRDLRGKLIAGGFFKANPLYYVWKVVSTVALAVGAWMLVAWSQNLGVQMLSAFLVALFWQQCGWLAHDFLHHQVFKNRALGDLAGIVIGNVFQGFSVAWWKNKHNTHHAVPNLVESSPDAQDGDPDIDTMPILAWSLKMADRAQQYSWG-------PFFVRHQSLLYFPILLVARISWLMQSFLFVFDSVPGASLWATKGATAERQA--IKNVGLEKVGLVAHYLWYGALM--LCHMSLARALLYFLASQMMCGFLLALVFGLGHNGMAVYDADARPDFWKLQVTTTRNVTGSW-----LVQWFCGGLGYQVDHHLFPMIPRHRLGKLHGLVEGFCKDHGVKYHETNMWEGTKEVLAHLSSVTKEFVADF 472
            MG+GG+        +  A+KA        KI+W +V++H TP DAW+VY+NKVYDVS W +HPGG VIFTHAG D TDIFAAFH  G+ + +  FYIG+L PGS++ K   Q  FE+ YRDLR KLI  G FK+N  +YV+K VS + L   A  +V +S+++ V M SA L+ LF+QQCGWLAHDFLHHQVF+ R  GDL GI  GN+ QG+SV WWKNKHN HHAVPNL  S+  +QDGDPDIDTMP+LAWSLK A   ++            F +R+Q+  YFPILL+AR+SWL +SF   F    GA   A++ A  E +A  ++   LEKVG++ HY W   +        +  A  YFL +   CGFLLA+VFGLGHNGMA YDADARPDFWKLQVTTTRN+TG        V WFCGGL YQVDHHLFP +PRH L K H LV  FCK+  V YHE ++ +GT EVL HLS V+ +F+ DF
Sbjct:    1 MGKGGD--------ASAANKA-------NKISWSQVKEHCTPDDAWVVYQNKVYDVSNWHEHPGGAVIFTHAGDDMTDIFAAFHAPGSQNLMQKFYIGDLIPGSNQNKTEHQIAFEKGYRDLRSKLILMGMFKSNGWFYVYKCVSNMMLWATAVAMVYYSESVAVHMASAVLLGLFFQQCGWLAHDFLHHQVFRQRKYGDLGGIYWGNLMQGYSVQWWKNKHNGHHAVPNLHNSTALSQDGDPDIDTMPLLAWSLKQAQSYRELQADGKDSASVKFLIRYQAYFYFPILLLARLSWLNESFKTAFGL--GA---ASENAALELKAKGLQYPILEKVGILLHYAWMFVVSSGFGRFPVWYAATYFLVATASCGFLLAIVFGLGHNGMATYDADARPDFWKLQVTTTRNITGGHGFPQAFVDWFCGGLQYQVDHHLFPSLPRHNLAKTHALVRSFCKEWNVHYHEADLVDGTIEVLQHLSKVSNDFLLDF 468

[Close]

BLAST of NO28G00700 vs. NCBI_GenBank
Match: BAO27782.1 (delta6 desaturase-a [Fistulifera solaris] >GAX27326.1 Delta8-fatty-acid desaturase [Fistulifera solaris])

HSP 1 Score: 507.3 bits (1305), Expect = 5.200e-140
Identity = 263/488 (53.89%), Postives = 326/488 (66.80%), Query Frame = 0

Query:    1 MGRGGERVETTESLSFTADKAGTIKQRGGKITWDEVRQHKTPQDAWLVYRNKVYDVSGWQDHPGGNVIFTHAGGDCTDIFAAFHPLGATSYLDPFYIGELEPGSDK-KPAAQANFERAYRDLRGKLIAGGFFKANPLYYVWKVVSTVALAVGAWMLVAWSQNLGVQMLSAFLVALFWQQCGWLAHDFLHHQVFKNRALGDLAGIVIGNVFQGFSVAWWKNKHNTHHAVPNLVESSPDAQDGDPDIDTMPILAWSLKMADRAQQYSWG-------PFFVRHQSLLYFPILLVARISWLMQSFLFVFDSVPGASLWATKGATAERQA--IKNVGLEKVGLVAHYLWYGALM--LCHMSLARALLYFLASQMMCGFLLALVFGLGHNGMAVYDADARPDFWKLQVTTTRNVTGSW-----LVQWFCGGLGYQVDHHLFPMIPRHRLGKLHGLVEGFCKDHGVKYHETNMWEGTKEVLAHLSSVTKEFVADF 472
            MG+GG+        +  A+KA        KI+W +V++H TP DAW+VY+NKVYDVS W +HPGG VIFTHAG D TDIFAAFH  G+ + +  FYIG+L PGS++ K   Q  FE+ YRDLR KLI  G FK+N  +YV+K VS + L   A  +V +S+++ V M SA L+ LF+QQCGWLAHDFLHHQVF+ R  GDL GI  GN+ QG+SV WWKNKHN HHAVPNL  S+  +QDGDPDIDTMP+LAWSLK A   ++            F +R+Q+  YFPILL+AR+SWL +SF   F    GA   A++ A  E +A  ++   LEK G++ HY W   +        +  A  YFL +   CGFLLA+VFGLGHNGMA YDADARPDFWKLQVTTTRN+TG        V WFCGGL YQVDHHLFP +PRH L K H LV  FCK+  V YHE ++ +GT EVL HLS V+ +F+ DF
Sbjct:    1 MGKGGD--------ASAANKA-------NKISWSQVKEHCTPDDAWVVYQNKVYDVSNWHEHPGGAVIFTHAGDDMTDIFAAFHAPGSQNLMQKFYIGDLIPGSNQNKTEHQIAFEKGYRDLRSKLILMGMFKSNGWFYVYKCVSNMMLWATAVAMVYYSESVAVHMASAVLLGLFFQQCGWLAHDFLHHQVFRQRKYGDLGGIYWGNLMQGYSVQWWKNKHNGHHAVPNLHNSTALSQDGDPDIDTMPLLAWSLKQAQSYRELQADGKDSASVKFLIRYQAYFYFPILLLARLSWLNESFKTAFGL--GA---ASENAALELKAKGLQYPILEKAGILLHYAWMFVVSSGFGRFPVWYATTYFLVATASCGFLLAIVFGLGHNGMATYDADARPDFWKLQVTTTRNITGGHGFPQAFVDWFCGGLQYQVDHHLFPSLPRHNLAKTHALVRSFCKEWNVHYHEADLVDGTIEVLQHLSKVSNDFLLDF 468

The following BLAST results are available for this feature:

BLAST of NO28G00700 vs. NCBI_GenBank

BLAST of NO28G00700 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20


Match Name	E-value	Identity	Description
AQX92135.1	3.700e-287	99.79	delta-6 fatty acid desaturase [Nannochloropsis oce...	[more]
ADM86708.1	1.200e-285	99.16	delta-6 desaturase [Nannochloropsis oculata]	[more]
EWM20915.1	3.500e-261	88.63	delta-6 fatty acid desaturase [Nannochloropsis gad...	[more]
ALG35825.1	2.900e-207	86.09	delta 6 fatty acid desaturase [Isochrysis sp. SKMK...	[more]
CBN74970.1	1.000e-167	63.88	delta-6 fatty acid desaturase [Ectocarpus siliculo...	[more]
AAU11444.1	7.000e-153	59.02	fatty acid desaturase [Glossomastix chrysoplasta] ...	[more]
XP_002291529.1	2.100e-141	52.63	probable microsomal delta-6 desaturase [Thalassios...	[more]
EJK45829.1	8.000e-141	55.84	hypothetical protein THAOC_35538 [Thalassiosira oc...	[more]
BAO27781.1	1.800e-140	54.10	delta6 desaturase-b [Fistulifera solaris] >GAX2743...	[more]
BAO27782.1	5.200e-140	53.89	delta6 desaturase-a [Fistulifera solaris] >GAX2732...	[more]

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Relationships

This gene is member of the following syntenic_region feature(s):


Feature Name	Unique Name	Species	Type
nonsL059	nonsL059	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ncniR054	ncniR054	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ngnoR094	ngnoR094	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region

This gene is orthologous to the following gene feature(s):


Feature Name	Unique Name	Species	Type
NSK004868	NSK004868	Nannochloropsis salina (N. salina CCMP1776)	gene

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
NO28G00700.1	NO28G00700.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following gene feature(s) are orthologous to this gene:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|606752	gene_9172	Nannochloropsis oceanica (N. oceanica CCMP1779)	gene
Naga_100061g21	gene9489	Nannochloropsis gaditana (N. gaditana B-31)	gene

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
NO28G00700.1	NO28G00700.1	Nannochloropsis oceanica (N. oceanica IMET1)	mRNA

Sequences

The following sequences are available for this feature:

gene sequence
protein sequence

gene sequence

>NO28G00700 ID=NO28G00700|Name=NO28G00700|organism=Nannochloropsis oceanica|type=gene|length=3678bp
AGGTTGAGCGCCTGTCGTCTCTTGTACTTAGGAAACCTAATTCCTCCACC
CATTTCAAGTTAACAATGGGACGCGGTGGCGAGCGGGTCGAGACGACGGA
GTCTTTGAGCTTCACGGCCGACAAGGCGGGGACCATCAAGCAGCGTGGGG
GGAAGATCACATGGGATGAGgtatgtgacggggcatggaggcgtcggacg
gaggaatgcagggagaaagggaaagagaggagaaaggaaagcaaggtgta
tctgctgtggcggtagatttgccatctatatgatcctttgagtgcagtgc
ttggatggaaggcgtcagtgcaatcctgtatgtgatgacggaggaagcag
cacaccttcccttccctaatctctgtcccctacaaccccgcgtatcctct
tctcccgatcacccacgctcacacacacctatttactctccagGTGCGTC
AGCACAAGACGCCTCAGGACGCTTGGCTCGTGTATAGGAATAAGGTCTAC
GACGTGTCGGGCTGGCAAGATCACCCCGGGGGGAACGTCATCTTCACTCA
CGCCGGCGGGGACTGCACGGATATTTTCGCGGCGTTCCACCCTCTTGGCG
CCACCTCTTATCTTGATCCATTTTACATTGGCGAGCTGGAGCCGGGCTCG
GACAAGAAGCCCGCAGCGCAGGCGAACTTTGAGCGGGCCTACAGGGATCT
CAGGGGGAAGCTTATCGCGGGTGGGTTTTTCAAGGCGAATCCTTTGTACT
ATGTCTGGAAGGTAGTATCGACAGTTGCCCTTGCTGTAGGTGCGTGGATG
CTGGTGGCTTGGTCGCAGAACCTGGGCGTGCAGATGCTGTCTGCGTTTTT
GGTGGCTCTGTTCTGGCAGCAATGTGGCTGGTTGGCCCATGACTTCCTGC
ACCACCAGGTATTTAAGAACCGTGCGTTGGGTGACCTGGCCGGCATCGTT
ATCGGCAATGTCTTCCAGGGTTTCTCCGTGGCATGGTGGAAGAACAAGCA
TAACACTCACCACGCGGTGCCCAACCTCGTCGAGTCCTCTCCGGACGCGC
AAGACGGAGACCCTGACATTGACACCATGCCCATACTGGCCTGGTCGCTC
AAGATGGCCGACAGGGCGCAGCAATACTCATGGGGACCCTTCTTTGTCAG
GCATCAGTCGCTGCTATACTTCCCCATCCTGCTCGTGGCGCGGATTTCAT
GGTTGATGCAGTCGTTCTTGTTTGTCTTTGACTCCGTCCCTGGAGCGAGT
CTGTGGGCAACCAAGGGCGCGACGGCTGAGAGACAGGCGATCAAGAATGT
CGGGTTGGAGAAGGTGGGGCTGGTTGCGCACTACCTGTGGTACGGTGCGC
TGATGCTGTGCCACATGTCCCTGGCCCGCGCCCTGCTGTACTTCCTGGCG
AGCCAGATGATGTGCGGGTTCTTGCTCGCGCTTGTTTTCGGGCTTGGGCA
CAACGGCATGGCTGTTTACGACGCGGACGCCCGGCCCGACTTCTGGAAGC
TGCAGGTGACGACGACGAGGAACGTGACGGGCTCGTGGTTGGTGCAGTGG
TTCTGTGGCGGCCTCGGCTACCAGGTGGACCACCACCTGTTCCCCATGAT
CCCGCGGCACCGCCTAGGGAAGCTCCACGGGCTCGTGGAGGGTTTCTGCA
AGGATCACGGGGTGAAGTACCACGAGACGAATATGTGGGAGGGGACCAAA
GAGGTGTTGGCTCACTTGAGCAGTGTGACGAAAGAGTTCGTGGCCGATTT
CCCCGCCATGTAAACGGACGGAGGGAAGCGAAGGAAGGAGGAGAGAACGT
GATATGGTGTGATATGGTAATTAGATAATAGAAGGTCGGACAAATAGCAA
GCAACGCGTGGTCGCGTGTAAAGATGCAAGGCTCGTGTTGTGGTGTCGTG
CAGGCTGGAGGGAAGGAGGGAGGAAGAGAGGAAGAGTGGAAACGTTCTCT
TTTTCTTTTTGACTGCCTAGATACGATCTCTTGGTTTTGGCAGCCCGTGT
ATGATAGAAGATGAGAAAGAAAATAAGGGTGGAAGTCCCTGTTTGCGTGA
GATGGGGGTCCGTCGGGATGATGGGCCAGGGGTGAAAGAAGGATGGAGAG
GGAGATAGAGGGAGAGTGAATGGCTTGAGAAGCAGAGGAGGGTCGTGGAG
GGGAATCAAACTGACGAAAGGCACGATTGAGAAGTGATTCATGAGAATAC
GACGAGAGAAGGGAGAGCATGAAAAAGGAAAACGACTGAGAAGACATGGT
CGTCTCGCGGCCTCCTCCTAGCGAGGGAGGGGGGAAGGGATTGCAAAATG
AGGGGGAGATTGAGAGAAGAAGAGAGCGAAACCAGCATGGGAGGCATTTT
TGTTCGGAAGTCAAATCGCTTTCATTTTGAAGGTACTGCCTTGTGACGTG
ATGTGCGCGCCTCCAGGTGCAACGTGTGTGCCCCTGGTGGTACGCCTATT
TGTTCGGTCTGTGTGTGCGTGTGAGCGTTTTTCCCACCCACCCCTCCATC
AACCTGGTCACACAAATCTGCCCTGAAGTGGTCTCCTAAGCGCAGAAGGT
CAGAAGTAGAAGGCGAAATGAGTGTGGGTGATGTGTATGGAGAAGGACGA
CGACGATGGTAGAGCAGCAGCAATAGTAGCATGGTAGTAGGTAAAATTAA
TGCGGTAGTTGAGAGGGATAAAAGAACCCAGCAATACCTGACTCATGACA
TGCTTTGGCCTTGCTTTAACTTATCTTGTAGCTGTGCGTGCGTGGGTACC
ATCCACCTGAGATCATTTTTAGCATGTGTGCCCTCCTTCGTCTATCCTGG
CCGCTCGGCGCATGCGTCCTATCACACCGCACATGACTTTTAGCGCGGTG
GCTCGTGCATTCGTAGAGGTTTCTGAAACTTCATGTGCTGCATGCCTTTT
TGATGGTGTTGCCGGGCCCTCAGGGGCAAGTCCTTGACAGAAAGAATGGA
AGGGAGGAGGCGACGACAAAAAAGAAAAGGAGGCATGGCTTCAGCTTTGT
GCACTGATATCGACTTTTTTGTGTGCTTTCGCTTGTTGTATGCATCCGTA
GATATGTACATAGACGTTTTCAACCTAGTGTTCCTTTCGTCCCTCCCTTC
TTCCTGTCGTTGAGCTGTGCCCCCCCCCAGCTCAGAATGACGTCATCAAA
CAGCTCTTTCGGCGGACAAGGCAACGGCCCTGTGCTCCCGTCGATCTCCT
TCAGATCGGGGGGGGGAGGGGGGGAGGAGGATGACAAAGATCCCTTCCCT
TGTCTTCTCAACAAACGAGGTACATCCAGCGGCTTGCTCGTGCCTGGACC
CTTCCCTCCTCCGTCCATCCCTCCCCTCGCCCCCCTCCCCTCTCTCCGCG
CCCGCAGCCTTGCCGCATGCTCCTCCAACACCCCCGCCACTTCCTCCTCC
CTTCCTCCCTTTCCCCCAGCTCCCCTTAAAAATTCATCGTAGACAGCCTG
TGCCACTGCCCATTTCCTCTCCGGGGGAGCCAGGAGAGGATCGCTTTCCA
ACCGACACAATTCCCTGTAGTCCTGCACCGCCAACACGAACGCCAGCTTC
TCGCCTAGACCCCTCCCTCCTTCCCTCATTTTTCCTCCTCCTCCGCACAG
GAGCCGGCGAATCCTTGCCTGCCTCCTGCTTTTGCTGATGCTCCTGCTGT
CTGGACTGCTGCTGCTGCTGCTGCTGCT

protein sequence of NO28G00700.1

>NO28G00700.1-protein ID=NO28G00700.1-protein|Name=NO28G00700.1|organism=Nannochloropsis oceanica|type=polypeptide|length=475bp
MGRGGERVETTESLSFTADKAGTIKQRGGKITWDEVRQHKTPQDAWLVYR
NKVYDVSGWQDHPGGNVIFTHAGGDCTDIFAAFHPLGATSYLDPFYIGEL
EPGSDKKPAAQANFERAYRDLRGKLIAGGFFKANPLYYVWKVVSTVALAV
GAWMLVAWSQNLGVQMLSAFLVALFWQQCGWLAHDFLHHQVFKNRALGDL
AGIVIGNVFQGFSVAWWKNKHNTHHAVPNLVESSPDAQDGDPDIDTMPIL
AWSLKMADRAQQYSWGPFFVRHQSLLYFPILLVARISWLMQSFLFVFDSV
PGASLWATKGATAERQAIKNVGLEKVGLVAHYLWYGALMLCHMSLARALL
YFLASQMMCGFLLALVFGLGHNGMAVYDADARPDFWKLQVTTTRNVTGSW
LVQWFCGGLGYQVDHHLFPMIPRHRLGKLHGLVEGFCKDHGVKYHETNMW
EGTKEVLAHLSSVTKEFVADFPAM*

Synonyms

Publications