NO28G00600, NO28G00600 (gene) Nannochloropsis oceanica

Overview
NameNO28G00600
Unique NameNO28G00600
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3201
Alignment locationchr28:211638..214838 -

Link to JBrowse

Properties
Property NameValue
DescriptionT-complex protein 1 subunit zeta
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr28genomechr28:211638..214838 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO:0005515protein binding
GO:0000166nucleotide binding
Vocabulary: INTERPRO
TermDefinition
IPR027409GroEL-like_apical_dom
IPR027413GROEL-like_equatorial
IPR027410TCP-1-like_intermed
IPR002423Cpn60/TCP-1
IPR017998Chaperone_TCP-1
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Homology
[Close]
BLAST of NO28G00600 vs. NCBI_GenBank
Match: EWM20929.1 (t-complex protein 1 subunit zeta isoform a [Nannochloropsis gaditana])

HSP 1 Score: 921.4 bits (2380), Expect = 1.300e-264
Identity = 488/546 (89.38%), Postives = 523/546 (95.79%), Query Frame = 0 
Query:    1 MAAATRLVNPSAEIVSKSQALLVNCSAAKGLQNVLKTNLGPRGTLKMLVGGAGQIKITKDGNVLLHEMQIQHPTASLIARTATAQDDITGDGTTTSVLLVGELLKQAERYLSEGLHPRVIADGYDLAKEQVLSFLETFKVQHPDILNDRELLLSIARTSXXXXXXXXXXXXXXXXXXXXXXXXAQGREEGQGQPGPIDLHMVEIMHMTHKMGSDSRFVRGLVMDHGARHPDMPKSLERCHIFTCNVSFEYEKTEVASGFFYSNAEEREKLVASERRFTDEKVKQVINFKRKVCKDGESFVVINQKGIDPLSLDLFAKEGILALRRAKRRNMERLTLACGGFPINSVEDLSEDMLGWAGKVYEQTLGDEKYTFVEDVKHARSCTILIKGPNQHTIDQIKDALRDGLRAVKNAIEDQALIPGGGAFEVAASHMLQSYKETVTGKPKLGVAAYADALLVVPKTLAENSGFDVQDTLIALLEEHARTGLPVGLDVTTGEGMSPAMVGVWDNHRVKRQSLHLATILATQLLVVDEVMRAGRQMGRASGGGE 547
            MAAATRLVNPSAEIVSKSQALLVNCSAAKGLQNVLK+NLGPRGTLKMLVGGAGQIKITKDGNVLLHEMQIQHPTASLIARTATAQDDITGDGTTTSVLLVGELLKQAER+LSEGLHPRVIA+GYDLAK++VL FL+TFKV  P+I +DRELLLSIARTSXXXXXXXXXXXXXXXXXXXXX   +QG          IDLHMVEIMHMTHK+GSDSRFVRGLV+DHGARHPDMPK+L RCHIFTCNVSFEYEK+EVASGFFYSNAEERE+LVASERRFTD+KV+QVI+FKRKVCK+GESFVVINQKGIDPLSLD+FAKEGILALRRAKRRNMERLTLACGG PINSVEDLSEDMLGWAG+VYEQTLG+EKYTFVEDV+HARSCTILIKGPNQHTIDQIKDALRDGLRAVKNAIED+AL+PGGG+FEVAASHMLQ+YKE V+GKPKLGV A+A+ALLVVPKTLAENSGFDVQDTLIALLEEHA+TG+ VGLDVTTGEGM+PAMVGVWDN+RVKRQSLHLATILATQLLVVDEVMRAGRQMGR +GGG+
Sbjct:    1 MAAATRLVNPSAEIVSKSQALLVNCSAAKGLQNVLKSNLGPRGTLKMLVGGAGQIKITKDGNVLLHEMQIQHPTASLIARTATAQDDITGDGTTTSVLLVGELLKQAERFLSEGLHPRVIAEGYDLAKDRVLEFLDTFKVAQPEIKHDRELLLSIARTSXXXXXXXXXXXXXXXXXXXXXLTLSQG--------PTIDLHMVEIMHMTHKLGSDSRFVRGLVLDHGARHPDMPKALNRCHIFTCNVSFEYEKSEVASGFFYSNAEERERLVASERRFTDDKVRQVIDFKRKVCKEGESFVVINQKGIDPLSLDMFAKEGILALRRAKRRNMERLTLACGGLPINSVEDLSEDMLGWAGRVYEQTLGEEKYTFVEDVRHARSCTILIKGPNQHTIDQIKDALRDGLRAVKNAIEDKALVPGGGSFEVAASHMLQTYKEAVSGKPKLGVVAFAEALLVVPKTLAENSGFDVQDTLIALLEEHAKTGIAVGLDVTTGEGMAPAMVGVWDNYRVKRQSLHLATILATQLLVVDEVMRAGRQMGRVAGGGQ 538
[Close]
BLAST of NO28G00600 vs. NCBI_GenBank
Match: CBN75950.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 773.5 bits (1996), Expect = 4.500e-220
Identity = 402/545 (73.76%), Postives = 470/545 (86.24%), Query Frame = 0 
Query:    1 MAAATRLVNPSAEIVSKSQALLVNCSAAKGLQNVLKTNLGPRGTLKMLVGGAGQIKITKDGNVLLHEMQIQHPTASLIARTATAQDDITGDGTTTSVLLVGELLKQAERYLSEGLHPRVIADGYDLAKEQVLSFLETFKVQHPDILNDRELLLSIARTSXXXXXXXXXXXXXXXXXXXXXXXXAQGREEGQGQPGPIDLHMVEIMHMTHKMGSDSRFVRGLVMDHGARHPDMPKSLERCHIFTCNVSFEYEKTEVASGFFYSNAEEREKLVASERRFTDEKVKQVINFKRKVCKDGESFVVINQKGIDPLSLDLFAKEGILALRRAKRRNMERLTLACGGFPINSVEDLSEDMLGWAGKVYEQTLGDEKYTFVEDVKHARSCTILIKGPNQHTIDQIKDALRDGLRAVKNAIEDQALIPGGGAFEVAASHMLQSYKETVTGKPKLGVAAYADALLVVPKTLAENSGFDVQDTLIALLEEHARTGLPVGLDVTTGEGMSPAMVGVWDNHRVKRQSLHLATILATQLLVVDEVMRAGRQMGRASGGG 546
            MAA TR VNP+AE+VSK+QAL+VN +AA+GLQNVLKTNLGPRGTLKMLVGGAGQIK+TKDG VLLHEMQIQHPTA +IAR+ATAQDD+TGDGTTTSVL  GELL+QAERYL+EGLHPRV+ +G++LAKE  L  L+TF+     +  DRELL S+ARTSXXXXXXXXXXXXXXXXXXXX     + R+E       IDLHMVEIM M HK G+DS  ++GLVMDHGARHPDMP+SL+ CHI TCNVSFEYEKTEV SGFFYS A+EREKLV SER+FTDEKV QVI FKRKVCK+GESFV+INQKGIDPLSLD+FAKEGI ALRRAKRRNMERLTLACGG  +NS ED+SE+MLGWAG+V+E+TLGD+K+TFVEDV+H RSCTIL+KGPN HTI QIKDA+RDGLRAVKN I+DQA++PG GAFEVAA+  LQ +K TV G+ KLG+ A+A+AL++VPKTLAENSGFDVQD++I L++EH  +G  VGLD+ TGE M P   GVWDN+ VKRQSLHL+T+LA+QLL+VDEVM+AG+QMG+A  GG
Sbjct:    1 MAAPTRFVNPNAEVVSKTQALMVNVAAARGLQNVLKTNLGPRGTLKMLVGGAGQIKLTKDGRVLLHEMQIQHPTAMMIARSATAQDDVTGDGTTTSVLFTGELLRQAERYLTEGLHPRVLTEGFELAKEHALELLDTFRSTRSAVEEDRELLESVARTSXXXXXXXXXXXXXXXXXXXXVLTIMKSRDE-------IDLHMVEIMQMRHKAGTDSVLIKGLVMDHGARHPDMPRSLKNCHILTCNVSFEYEKTEVQSGFFYSTAQEREKLVESERKFTDEKVMQVIEFKRKVCKEGESFVIINQKGIDPLSLDMFAKEGIFALRRAKRRNMERLTLACGGMAVNSTEDISEEMLGWAGQVHEETLGDDKFTFVEDVRHPRSCTILVKGPNDHTIAQIKDAIRDGLRAVKNTIDDQAVVPGAGAFEVAANLSLQKFKTTVKGRAKLGIEAFAEALMIVPKTLAENSGFDVQDSVIKLVDEHVESGAAVGLDLMTGEPMLPEQEGVWDNYCVKRQSLHLSTVLASQLLLVDEVMKAGKQMGQAPPGG 538
[Close]
BLAST of NO28G00600 vs. NCBI_GenBank
Match: CCI40203.1 (unnamed protein product [Albugo candida])

HSP 1 Score: 709.1 bits (1829), Expect = 1.000e-200
Identity = 347/529 (65.60%), Postives = 426/529 (80.53%), Query Frame = 0 
Query:   13 EIVSKSQALLVNCSAAKGLQNVLKTNLGPRGTLKMLVGGAGQIKITKDGNVLLHEMQIQHPTASLIARTATAQDDITGDGTTTSVLLVGELLKQAERYLSEGLHPRVIADGYDLAKEQVLSFLETFKVQHPDILNDRELLLSIARTSXXXXXXXXXXXXXXXXXXXXXXXXAQGREEGQGQPGPIDLHMVEIMHMTHKMGSDSRFVRGLVMDHGARHPDMPKSLERCHIFTCNVSFEYEKTEVASGFFYSNAEEREKLVASERRFTDEKVKQVINFKRKVCKD--GESFVVINQKGIDPLSLDLFAKEGILALRRAKRRNMERLTLACGGFPINSVEDLSEDMLGWAGKVYEQTLGDEKYTFVEDVKHARSCTILIKGPNQHTIDQIKDALRDGLRAVKNAIEDQALIPGGGAFEVAASHMLQSYKETVTGKPKLGVAAYADALLVVPKTLAENSGFDVQDTLIALLEEHARTGLPVGLDVTTGEGMSPAMVGVWDNHRVKRQSLHLATILATQLLVVDEVMRAGRQMG 540
            E V KSQALLVN SAAKGLQ+VLK+NLGPRGTLKMLVGGAGQIK+TKDGNVLLHEMQIQHPTASLIAR ATAQDD+TGDGTT++VL +GELLKQAER+L++GLHPR++++G++LAK++ LS L+  K   PDI  DRE+L S+A+TS                        A+           +DLHM+EIMHM H+  SD+R V+GLV+DHG+RHPDMP  LE C I TCN+S EYEK+EV SGFFY++A++RE++V +ER+FTD+KV+Q+I  KR+VC D   ++FV+INQKGIDPLSLD+ AKEGILALRRAKRRNMERLTLACGG  INS +D+   MLG+A +V+E+TLG+E+YTFVEDV+H +SCTILIKGPN+HTI QIKDALRDG+RAV NAIED+A++PG GAFE+ A   LQ YK+TV G+ KLGV A+ADALL++PK LAENSGFD+QDTLIAL EEH  +G PVGLD+ TGE M P   G+WDN+RVKRQ +HLAT LA+QLL+VDEVMR+G+  G
Sbjct:    4 EAVGKSQALLVNVSAAKGLQSVLKSNLGPRGTLKMLVGGAGQIKLTKDGNVLLHEMQIQHPTASLIARAATAQDDVTGDGTTSTVLFIGELLKQAERFLTDGLHPRILSEGFELAKDKALSVLDAIKTALPDIAKDREMLCSVAKTSLRTKLDAKLADQLTEIVTDAVLTIARPNR-------AVDLHMIEIMHMQHQSSSDTRLVKGLVLDHGSRHPDMPNYLENCFIMTCNISLEYEKSEVTSGFFYNSAKQREQMVEAERKFTDDKVRQIIELKRQVCTDENKKNFVIINQKGIDPLSLDMLAKEGILALRRAKRRNMERLTLACGGMAINSTDDMDASMLGFAARVHEETLGEERYTFVEDVQHPQSCTILIKGPNEHTIAQIKDALRDGIRAVNNAIEDRAVVPGAGAFELTAHEALQQYKKTVKGRAKLGVQAFADALLIIPKVLAENSGFDIQDTLIALQEEHCNSGEPVGLDLYTGEPMLPGQEGIWDNYRVKRQFIHLATALASQLLLVDEVMRSGKSSG 525
[Close]
BLAST of NO28G00600 vs. NCBI_GenBank
Match: XP_002294393.1 (t-complex protein 1 zeta subunit [Thalassiosira pseudonana CCMP1335] >EED88227.1 t-complex protein 1 zeta subunit [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 703.7 bits (1815), Expect = 4.300e-199
Identity = 359/538 (66.73%), Postives = 427/538 (79.37%), Query Frame = 0 
Query:    8 VNPSAEIVSKSQALLVNCSAAKGLQNVLKTNLGPRGTLKMLVGGAGQIKITKDGNVLLHEMQIQHPTASLIARTATAQDDITGDGTTTSVLLVGELLKQAERYLSEGLHPRVIADGYDLAKEQVLSFLETFKV--QHPDILNDRELLLSIARTSXXXXXXXXXXXXXXXXXXXXXXXXAQGREEGQGQPGPIDLHMVEIMHMTHKMGSDSRFVRGLVMDHGARHPDMPKSLERCHIFTCNVSFEYEKTEVASGFFYSNAEEREKLVASERRFTDEKVKQVINFKRKVCKDGESFVVINQKGIDPLSLDLFAKEGILALRRAKRRNMERLTLACGGFPINSVEDLSEDMLGWAGKVYEQTLGDEKYTFVEDVKHARSCTILIKGPNQHTIDQIKDALRDGLRAVKNAIEDQALIPGGGAFEVAAS-HMLQSYKETVTGKPKLGVAAYADALLVVPKTLAENSGFDVQDTLIALLEEHARTG--LPVGLDVTTGEGMSPAMVGVWDNHRVKRQSLHLATILATQLLVVDEVMRAGRQMGR 541
            +N SAEIVS   AL VN +A+ GLQ+VLK+NLGPRGTLKMLVGGAGQIK+TKDGNVLLHEMQIQHPTA+LIARTATAQD+ITGDGTT++VLL GELLKQA RY SEGLHPRVIADG+D+A++  + FL+ FKV   + DI  DRELL  +A TS                                    P+DL+MVEIM M  KMG+DSRFV GLV+DHG RHPDMPK L  CHI TCNV+FEYEKTEV SGFFYS+AEEREKLV SER++ DE+ +QV++FKR VC++GESFV+INQKGIDPLSLD+FAKEGIL LRRAKRRNMERLTLACGG PI+SVEDL +DMLGW GKV E TLGD+K+TFVE+ +H +SCT+L++GPN HTIDQIKDA+RDGLRAVKNAIEDQA++PG GAFE+AA+ H+ +   +   G+ KLGV AYA+ALLV+PKTLAENSGFDVQD ++ L +    +G  L VGLD  +G+ M PA  G+WDN RVKRQ LHL+T+LA+QLL+VDEVMRAG+QMG+
Sbjct:    7 LNASAEIVSHGAALAVNIAASTGLQSVLKSNLGPRGTLKMLVGGAGQIKLTKDGNVLLHEMQIQHPTAALIARTATAQDEITGDGTTSTVLLCGELLKQAHRYTSEGLHPRVIADGFDIARDATVKFLDDFKVDFSNKDIAQDRELLRCLASTSLKTKLDHDLADKMSDAVVDAIQCIVPEDTTN----SPVDLNMVEIMTMQRKMGTDSRFVNGLVLDHGGRHPDMPKVLNNCHIMTCNVTFEYEKTEVQSGFFYSSAEEREKLVESERKWLDERCRQVVDFKRSVCQEGESFVMINQKGIDPLSLDIFAKEGILCLRRAKRRNMERLTLACGGSPIHSVEDLDKDMLGWCGKVSEVTLGDDKFTFVEECRHPKSCTLLLQGPNVHTIDQIKDAVRDGLRAVKNAIEDQAIVPGAGAFELAAAMHLREVVAKATKGRAKLGVEAYAEALLVIPKTLAENSGFDVQDCILKLQDAREDSGCTLAVGLDCQSGDPMIPADEGIWDNVRVKRQCLHLSTVLASQLLLVDEVMRAGKQMGK 540
[Close]
BLAST of NO28G00600 vs. NCBI_GenBank
Match: GAX96711.1 (T-complex protein 1 subunit zeta, partial [Pythium insidiosum])

HSP 1 Score: 698.4 bits (1801), Expect = 1.800e-197
Identity = 376/548 (68.61%), Postives = 445/548 (81.20%), Query Frame = 0 
Query:    3 AATRLVNPSAEIVSKSQALLVNCSAAKGLQNVLKTNLGPRGTLKMLVGGAGQIKITKDGNVLLHEMQIQHPTASLIARTATAQDDITGDGTTTSVLLVGELLKQAERYLSEGLHPRVIADGYDLAKEQVLSFLETFKVQHPDILNDRELLLSIARTSXXXXXXXXXXXXXXXXXXXXXXXXAQGREEGQGQPGPIDLHMVEIMHMTHKMGSDSRFVRGLVMDHGARHPDMPKSLERCHIFTCNVSFEYEKTEVASGFFYSNAEEREKLVASERRFTDEKVKQVINFKRKVCKD--GESFVVINQKGIDPLSLDLFAKEGILALRRAKRRNMERLTLACGGFPINSVEDLSEDMLGWAGKVYEQTLGDEKYTFVEDVKHARSCTILIKGPNQHTIDQIKDALRDGLRAVKNAIEDQALIPGGGAFEVAASHMLQSYKETVTGKPKLGVAAYADALLVVPKTLAENSGFDVQDTLIALLEEHARTGLPVGLDVTTGEGMSPAMVGVWDNHRVKRQSLHLATILATQLLVVDEVMRAGRQMGRASGGGEEE 549
            ++ R +NP+AEIV+K+QAL+VN SAAKGLQ VLK+NL                  TKDGNVLLHEMQIQHPTA+LIAR ATAQDD+TGDGTT++VL +GELLKQAER+LS+GLHPRV+A+G+++AK++ L  LET K+   DIL DRELL S+ARTSXXXXXXXXXXXXXXXXXXXXXX  A           P+DLHM+EIMHM H+  SD+R V+GLV+DHG+RHPDMP SLE C+I TCNVS EYEKTEV SGFFY++AE+REK+V +ER+FTD+KV+Q+I  KR +C D   ++FV+INQKGIDPLSLD+ AKEGILALRRAKRRNMERL+LACGG PINS ED+ E MLGWAGKVYEQTLG+EKYTFVEDVKH +SCTILIKGPN+HTI QIKDA+RDG+RAV NAIEDQ ++PG GAFE+AA   L   K  V G+ KLGV A+ADALLV+PK LAENSG DVQDTLIA+LEE A++G  VGLD+ TGE M PA  GVWDN+RVKRQ +HLAT LA+QLL+VDEVMRAG+ MG  +   E E
Sbjct:  217 SSMRGMNPNAEIVAKTQALMVNVSAAKGLQGVLKSNLXXXXXXXXXXXXXXXXXXTKDGNVLLHEMQIQHPTAALIARAATAQDDVTGDGTTSTVLFIGELLKQAERFLSDGLHPRVLAEGFEIAKDEALRVLETLKLSKKDILKDRELLCSVARTSXXXXXXXXXXXXXXXXXXXXXXTIAVPNR-------PLDLHMIEIMHMLHQSASDTRLVKGLVLDHGSRHPDMPTSLENCYIMTCNVSLEYEKTEVNSGFFYNSAEQREKMVEAERQFTDDKVRQIIELKRSLCTDENKKNFVIINQKGIDPLSLDMLAKEGILALRRAKRRNMERLSLACGGMPINSTEDMDESMLGWAGKVYEQTLGEEKYTFVEDVKHPQSCTILIKGPNEHTIAQIKDAIRDGIRAVNNAIEDQGVVPGAGAFELAAHEALNKLKGDVKGRAKLGVQAFADALLVIPKVLAENSGLDVQDTLIAVLEERAQSGEAVGLDLFTGEPMLPAQEGVWDNYRVKRQFIHLATTLASQLLLVDEVMRAGKNMGAKAPAAELE 757
[Close]
BLAST of NO28G00600 vs. NCBI_GenBank
Match: XP_009839860.1 (T-complex protein 1, zeta subunit [Aphanomyces astaci] >ETV70796.1 T-complex protein 1, zeta subunit [Aphanomyces astaci])

HSP 1 Score: 686.0 bits (1769), Expect = 9.400e-194
Identity = 359/551 (65.15%), Postives = 442/551 (80.22%), Query Frame = 0 
Query:    3 AATRLVNPSAEIVSKSQALLVNCSAAKGLQNVLKTNLGPRGTLKMLVGGAGQIKITKDGNVLLHEMQIQHPTASLIARTATAQDDITGDGTTTSVLLVGELLKQAERYLSEGLHPRVIADGYDLAKEQVLSFLETFKVQHPDILNDRELLLSIARTSXXXXXXXXXXXXXXXXXXXXXXXXAQGREEGQGQPG-PIDLHMVEIMHMTHKMGSDSRFVRGLVMDHGARHPDMPKSLERCHIFTCNVSFEYEKTEVASGFFYSNAEEREKLVASERRFTDEKVKQVINFKRKVCKDGE--SFVVINQKGIDPLSLDLFAKEGILALRRAKRRNMERLTLACGGFPINSVEDLSEDMLGWAGKVYEQTLGDEKYTFVEDVKHARSCTILIKGPNQHTIDQIKDALRDGLRAVKNAIEDQALIPGGGAFEVAASHMLQSYKETVTGKPKLGVAAYADALLVVPKTLAENSGFDVQDTLIALLEEHARTGLPVGLDVTTGEGMSPAMVGVWDNHRVKRQSLHLATILATQLLVVDEVMRAGRQMGRAS--GGGEEE 549
            ++ R VNP+AE+V++SQALLVN SAA+GLQ VLK+NLGP               +TKDGNVLLHEMQIQHPTA++IAR ATAQDDITGDGTT+SVL  GELLKQAER+LS+GLHPR++A+G++LA+E+ L  L+  KV  PD+L DRELL S+ARTS  XXXXXXXXXXXXXXXX      A         PG P+DLHM+EIMHM H+  +D+R ++GLV+DHG+RHPDMP  LE C I TCNVS EYEK+EV SGFFY++A++REK+V +ER+FTD+KVKQ+I  KR VC D    SFV+INQKGIDPLSLD+ AKEGILALRRAKRRNMERLTLACGG  INS +D+  +MLGWAGKVYEQTLG++ YTFVEDV+H +SC+ILIKGPN+HTI QIKDA+RDG+RAV N IED +++PGGGAFE+AA   L ++K+T++G+ KLGV A+ADALL++PK LAENSG DVQD L+A LEE A +G  VGLD+ +G+ M P   G+ DN+RVKRQ +HLAT LA+QLL+VDEVMRAGRQMG++     G++E
Sbjct:    2 SSVRTVNPNAEVVARSQALLVNVSAARGLQGVLKSNLGPXXXXXXXXXXXXXXXLTKDGNVLLHEMQIQHPTAAVIARAATAQDDITGDGTTSSVLFTGELLKQAERFLSDGLHPRILAEGFELAREEALRVLDNIKVDKPDVLQDRELLTSVARTSLRXXXXXXXXXXXXXXXXDAVLTIA--------TPGRPVDLHMIEIMHMVHQSAADTRLIKGLVLDHGSRHPDMPSELENCFIMTCNVSLEYEKSEVNSGFFYNSADQREKMVEAERKFTDDKVKQIIELKRHVCTDENKASFVIINQKGIDPLSLDMLAKEGILALRRAKRRNMERLTLACGGMAINSTDDMDVNMLGWAGKVYEQTLGEDNYTFVEDVRHPQSCSILIKGPNEHTIAQIKDAVRDGIRAVNNTIEDGSVVPGGGAFELAAHRALYAFKDTISGRAKLGVQAFADALLIIPKVLAENSGLDVQDALLACLEEGAASGEAVGLDLFSGQPMLPLQEGIIDNYRVKRQFIHLATALASQLLLVDEVMRAGRQMGKSQQPDAGQDE 544
[Close]
BLAST of NO28G00600 vs. NCBI_GenBank
Match: XP_009517844.1 (hypothetical protein PHYSODRAFT_553558 [Phytophthora sojae] >EGZ30569.1 hypothetical protein PHYSODRAFT_553558 [Phytophthora sojae])

HSP 1 Score: 685.3 bits (1767), Expect = 1.600e-193
Identity = 360/545 (66.06%), Postives = 437/545 (80.18%), Query Frame = 0 
Query:    6 RLVNPSAEIVSKSQALLVNCSAAKGLQNVLKTNLGPRGTLKMLVGGAGQIKITKDGNVLLHEMQIQHPTASLIARTATAQDDITGDGTTTSVLLVGELLKQAERYLSEGLHPRVIADGYDLAKEQVLSFLETFKVQHPDILNDRELLLSIARTSXXXXXXXXXXXXXXXXXXXXXXXXAQGREEGQGQPGPIDLHMVEIMHMTHKMGSDSRFVRGLVMDHGARHPDMPKSLERCHIFTCNVSFEYEKTEVASGFFYSNAEEREKLVASERRFTDEKVKQVINFKRKVC--KDGESFVVINQKGIDPLSLDLFAKEGILALRRAKRRNMERLTLACGGFPINSVEDLSEDMLGWAGKVYEQTLGDEKYTFVEDVKHARSCTILIKGPNQHTIDQIKDALRDGLRAVKNAIEDQALIPGGGAFEVAASHMLQSYKETVTGKPKLGVAAYADALLVVPKTLAENSGFDVQDTLIALLEEHARTGLPVGLDVTTGEGMSPAMVGVWDNHRVKRQSLHLATILATQLLVVDEVMRAGRQMGRASGGGEEE 549
            R +NP+AEIVSKSQAL+VN SAAKGLQ VLK+                    TKDGNVLLHEMQIQHPTA+LIAR ATAQDD+TGDGTT++VL +GELLKQAER+L++GLHPR++++G++LAK++ L  L+T K    DIL DRELL S+ARTS  XXXXXXXXXXXXXXXX      A           PIDLHM+EIMHM H+  SD+R V+GLV+DHG+RHPDMP SLE C+I TCNVS EYEK+EV SGFFY++AE+REK+V +ER+FTD+KV+Q+I  KR+VC  ++G+SFV+INQKGIDPLSLD+ AKEGILALRRAKRRNMER+TLACGG PINS +D+ E MLG+AGKVYEQTLG+E+YTFVEDV+H +SCTILIKGPN+HTI QIKDA+RDG+RAV NA+ED+ ++PG  AFE+ A   L  +K TV G+ KLGV A+ADALLV+PK LAENSG DVQDTLIA+ EEH  +G+ VG+D+ +GE M P   G+WDN+RVKRQ +HLAT LA+QLL+VDEVMRAG+QMG   GGG  E
Sbjct:    4 RGMNPNAEIVSKSQALMVNVSAAKGLQGVLKSXXXXXXXXXXXXXXXXXXXXTKDGNVLLHEMQIQHPTAALIARAATAQDDVTGDGTTSTVLFIGELLKQAERFLADGLHPRILSEGFELAKDEALRVLDTMKTTPEDILKDRELLCSVARTSLRXXXXXXXXXXXXXXXXDAVLTIAVPER-------PIDLHMIEIMHMMHQSSSDTRLVKGLVLDHGSRHPDMPTSLENCYIMTCNVSLEYEKSEVNSGFFYNSAEQREKMVEAERKFTDDKVRQIIELKREVCTEENGKSFVIINQKGIDPLSLDMLAKEGILALRRAKRRNMERITLACGGMPINSTDDMDESMLGYAGKVYEQTLGEERYTFVEDVQHPKSCTILIKGPNEHTIAQIKDAIRDGVRAVNNAVEDKGVVPGAAAFELTAHEALNKFKGTVKGRAKLGVQAFADALLVIPKVLAENSGLDVQDTLIAVQEEHQNSGMFVGIDLFSGEPMLPEQEGIWDNYRVKRQFIHLATTLASQLLLVDEVMRAGKQMG--GGGGMPE 539
[Close]
BLAST of NO28G00600 vs. NCBI_GenBank
Match: XP_008614652.1 (T-complex protein 1 subunit zeta [Saprolegnia diclina VS20] >EQC31924.1 T-complex protein 1 subunit zeta [Saprolegnia diclina VS20])

HSP 1 Score: 684.9 bits (1766), Expect = 2.100e-193
Identity = 367/550 (66.73%), Postives = 438/550 (79.64%), Query Frame = 0 
Query:    3 AATRLVNPSAEIVSKSQALLVNCSAAKGLQNVLKTNLGPRGTLKMLVGGAGQIKITKDGNVLLHEMQIQHPTASLIARTATAQDDITGDGTTTSVLLVGELLKQAERYLSEGLHPRVIADGYDLAKEQVLSFLETFKVQHPDILNDRELLLSIARTSXXXXXXXXXXXXXXXXXXXXXXXXAQGREEGQGQPG-PIDLHMVEIMHMTHKMGSDSRFVRGLVMDHGARHPDMPKSLERCHIFTCNVSFEYEKTEVASGFFYSNAEEREKLVASERRFTDEKVKQVINFKRKVCKDGE--SFVVINQKGIDPLSLDLFAKEGILALRRAKRRNMERLTLACGGFPINSVEDLSEDMLGWAGKVYEQTLGDEKYTFVEDVKHARSCTILIKGPNQHTIDQIKDALRDGLRAVKNAIEDQALIPGGGAFEVAASHMLQSYKETVTGKPKLGVAAYADALLVVPKTLAENSGFDVQDTLIALLEEHARTGLPVGLDVTTGEGMSPAMVGVWDNHRVKRQSLHLATILATQLLVVDEVMRAGRQMGRAS--GGGEE 548
            ++ R VNP+AE+V++SQALLVN SAAKGLQ VLK+NLGP               +TKDGNVLLHEMQIQHPTA++IAR ATAQDDITGDGTT++VL  GELLKQAER+LS+GLHPRV+A+G++LA+E+ L  L+  KV+  DIL DRELL S+ARTS XXXXXXXXXXXXXXXXX      A         PG PIDLHM+EIMHM H+  +D+R ++GLV+DHG+RHPDMP  LE C I TCNVS EYEK+EV SGFFY++AE+REK+V +ER+FTD+KVKQ+I  KR VC D    SFV+INQKGIDPLSLD+ AKEGILALRRAKRRNMERLTLACGG  INS +D+  +MLG+AG+VYEQTLG++ YTFVEDV+H +SC+ILIKGPN+HTI QIKDA+RDG+RAV N IED  ++PG GAFE AA   L ++KETV G+ KLGV A+ADALLV+PK LAENSG DVQD L+A LEEH  +G  VGLD+ +GE M P   GV DN+RVKRQ +HLA+ LATQLL+VDEVMRAGRQMGR+    G EE
Sbjct:    2 SSVRTVNPNAEVVARSQALLVNVSAAKGLQGVLKSNLGPXXXXXXXXXXXXXXXLTKDGNVLLHEMQIQHPTAAVIARAATAQDDITGDGTTSTVLFTGELLKQAERFLSDGLHPRVLAEGFELAREEALRVLDQIKVEKKDILQDRELLASVARTSLXXXXXXXXXXXXXXXXXDAVLTIA--------TPGRPIDLHMIEIMHMVHQSAADTRLIKGLVLDHGSRHPDMPTELENCFIMTCNVSLEYEKSEVNSGFFYNSAEQREKMVEAERKFTDDKVKQIIELKRHVCTDENKASFVIINQKGIDPLSLDMLAKEGILALRRAKRRNMERLTLACGGMAINSTDDMEPNMLGYAGRVYEQTLGEDHYTFVEDVRHPQSCSILIKGPNEHTIAQIKDAIRDGIRAVNNTIEDNGVVPGAGAFEFAAHQALYAFKETVKGRAKLGVQAFADALLVIPKVLAENSGLDVQDALLACLEEHKASGKAVGLDLFSGEPMLPLSEGVLDNYRVKRQFIHLASALATQLLLVDEVMRAGRQMGRSQEPQGAEE 543
[Close]
BLAST of NO28G00600 vs. NCBI_GenBank
Match: XP_012205386.1 (T-complex protein 1 subunit zeta [Saprolegnia parasitica CBS 223.65] >KDO23920.1 T-complex protein 1 subunit zeta [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 683.3 bits (1762), Expect = 6.100e-193
Identity = 366/550 (66.55%), Postives = 437/550 (79.45%), Query Frame = 0 
Query:    3 AATRLVNPSAEIVSKSQALLVNCSAAKGLQNVLKTNLGPRGTLKMLVGGAGQIKITKDGNVLLHEMQIQHPTASLIARTATAQDDITGDGTTTSVLLVGELLKQAERYLSEGLHPRVIADGYDLAKEQVLSFLETFKVQHPDILNDRELLLSIARTSXXXXXXXXXXXXXXXXXXXXXXXXAQGREEGQGQPG-PIDLHMVEIMHMTHKMGSDSRFVRGLVMDHGARHPDMPKSLERCHIFTCNVSFEYEKTEVASGFFYSNAEEREKLVASERRFTDEKVKQVINFKRKVCKDGE--SFVVINQKGIDPLSLDLFAKEGILALRRAKRRNMERLTLACGGFPINSVEDLSEDMLGWAGKVYEQTLGDEKYTFVEDVKHARSCTILIKGPNQHTIDQIKDALRDGLRAVKNAIEDQALIPGGGAFEVAASHMLQSYKETVTGKPKLGVAAYADALLVVPKTLAENSGFDVQDTLIALLEEHARTGLPVGLDVTTGEGMSPAMVGVWDNHRVKRQSLHLATILATQLLVVDEVMRAGRQMGRAS--GGGEE 548
            ++ R VNP+AE+V++SQALLVN SAAKGLQ VLK+NLGP               +TKDGNVLLHEMQIQHPTA++IAR ATAQDDITGDGTT++VL  GELLKQAER+LS+GLHPRV+A+G++LA+E+ L  L+  KV+  DIL DRELL S+ARTS XXXXXXXXXXXXXXXXX      A         PG PIDLHM+EIMHM H+  +D+R ++GLV+DHG+RHPDMP  LE C I TCNVS EYEK+EV SGFFY++AE+REK+V +ER+FTD+KVKQ+I  KR VC D    SFV+INQKGIDPLSLD+ AKEGILALRRAKRRNMERLTLACGG  INS +D+  +MLG+AG+VYEQTLG++ YTFVEDV+H +SC+ILIKGPN+HTI QIKDA+RDG+RAV N IED  ++PG G FE AA   L ++KETV G+ KLGV A+ADALLV+PK LAENSG DVQD L+A LEEH  +G  VGLD+ +GE M P   GV DN+RVKRQ +HLA+ LATQLL+VDEVMRAGRQMGR+    G EE
Sbjct:    2 SSVRTVNPNAEVVARSQALLVNVSAAKGLQGVLKSNLGPXXXXXXXXXXXXXXXLTKDGNVLLHEMQIQHPTAAVIARAATAQDDITGDGTTSTVLFTGELLKQAERFLSDGLHPRVLAEGFELAREEALRVLDHIKVEKKDILQDRELLASVARTSLXXXXXXXXXXXXXXXXXDAVLTIA--------TPGRPIDLHMIEIMHMVHQSAADTRLIKGLVLDHGSRHPDMPTELENCFIMTCNVSLEYEKSEVNSGFFYNSAEQREKMVEAERKFTDDKVKQIIELKRHVCTDENKASFVIINQKGIDPLSLDMLAKEGILALRRAKRRNMERLTLACGGMAINSTDDMEPNMLGYAGRVYEQTLGEDHYTFVEDVRHPQSCSILIKGPNEHTIAQIKDAIRDGIRAVNNTIEDNGVVPGAGTFEFAAHQALYAFKETVKGRAKLGVQAFADALLVIPKVLAENSGLDVQDALLACLEEHKASGKAVGLDLFSGEPMLPLQEGVLDNYRVKRQFIHLASALATQLLLVDEVMRAGRQMGRSQEPQGAEE 543
[Close]
BLAST of NO28G00600 vs. NCBI_GenBank
Match: XP_008871441.1 (T-complex protein 1, zeta subunit [Aphanomyces invadans] >ETV99665.1 T-complex protein 1, zeta subunit [Aphanomyces invadans])

HSP 1 Score: 682.9 bits (1761), Expect = 7.900e-193
Identity = 354/542 (65.31%), Postives = 444/542 (81.92%), Query Frame = 0 
Query:    3 AATRLVNPSAEIVSKSQALLVNCSAAKGLQNVLKTNLGPRGTLKMLVGGAGQIKITKDGNVLLHEMQIQHPTASLIARTATAQDDITGDGTTTSVLLVGELLKQAERYLSEGLHPRVIADGYDLAKEQVLSFLETFKVQHPDILNDRELLLSIARTSXXXXXXXXXXXXXXXXXXXXXXXXAQGREEGQGQPG-PIDLHMVEIMHMTHKMGSDSRFVRGLVMDHGARHPDMPKSLERCHIFTCNVSFEYEKTEVASGFFYSNAEEREKLVASERRFTDEKVKQVINFKRKVC--KDGESFVVINQKGIDPLSLDLFAKEGILALRRAKRRNMERLTLACGGFPINSVEDLSEDMLGWAGKVYEQTLGDEKYTFVEDVKHARSCTILIKGPNQHTIDQIKDALRDGLRAVKNAIEDQALIPGGGAFEVAASHMLQSYKETVTGKPKLGVAAYADALLVVPKTLAENSGFDVQDTLIALLEEHARTGLPVGLDVTTGEGMSPAMVGVWDNHRVKRQSLHLATILATQLLVVDEVMRAGRQMGRA 542
            ++ R VNP+AE+V++SQALLVN SAA+GLQ VLK+NLGP               +TKDGNVLLHEMQIQHPTA++IAR ATAQDDITGDGTT+SVL  GELLKQAER+LS+GLHPR++A+G++LA+E+ L  L+  KV+ P++L+DRELL S+ARTS XXXXXXXXXXXXXXXXXX     A         PG P+DLHM+EIMHM H+  +D+R ++GLV+DHG+RHPDMP  L+ C+I TCNVS EYEK+EV SGFFY++AE+REK+V +ER+FTD+KVKQ+I  KR VC  ++  +FV+INQKGIDPLSLD+ AKEGILALRRAKRRNMERLTLACGG  INS +D+   MLGWAGKVYEQTLG++ YTFVEDV+H +SC+ILIKGPN+HTI QIKDA+RDG+RAV N +ED +++PGGGA+E+AA   L ++K+T++G+ KLGV A+ADALL++PK LAENSG DVQD L+A LEE A++G  VGLD+ +G+ M P   G+ DN+RVKRQ +HLAT LA+QLL+VDEVMRAGRQMG++
Sbjct:    2 SSVRTVNPNAEVVARSQALLVNVSAARGLQGVLKSNLGPXXXXXXXXXXXXXXXLTKDGNVLLHEMQIQHPTAAVIARAATAQDDITGDGTTSSVLFTGELLKQAERFLSDGLHPRILAEGFELAREEALRVLDKIKVEKPNLLHDRELLTSVARTSLXXXXXXXXXXXXXXXXXXAVLTIA--------VPGRPVDLHMIEIMHMVHQSAADTRLIKGLVLDHGSRHPDMPSELDNCYIMTCNVSLEYEKSEVNSGFFYNSAEQREKMVEAERKFTDDKVKQIIELKRHVCTEENKANFVIINQKGIDPLSLDMLAKEGILALRRAKRRNMERLTLACGGMAINSTDDMDVSMLGWAGKVYEQTLGEDSYTFVEDVRHPQSCSILIKGPNEHTIAQIKDAVRDGIRAVNNTLEDASVVPGGGAYELAAHRALYAFKDTISGRAKLGVQAFADALLIIPKVLAENSGLDVQDALLACLEEGAKSGEAVGLDLFSGQPMLPLQEGILDNYRVKRQFIHLATALASQLLLVDEVMRAGRQMGKS 535
The following BLAST results are available for this feature:
BLAST of NO28G00600 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM20929.11.300e-26489.38t-complex protein 1 subunit zeta isoform a [Nannoc... [more]
CBN75950.14.500e-22073.76conserved unknown protein [Ectocarpus siliculosus][more]
CCI40203.11.000e-20065.60unnamed protein product [Albugo candida][more]
XP_002294393.14.300e-19966.73t-complex protein 1 zeta subunit [Thalassiosira ps... [more]
GAX96711.11.800e-19768.61T-complex protein 1 subunit zeta, partial [Pythium... [more]
XP_009839860.19.400e-19465.15T-complex protein 1, zeta subunit [Aphanomyces ast... [more]
XP_009517844.11.600e-19366.06hypothetical protein PHYSODRAFT_553558 [Phytophtho... [more]
XP_008614652.12.100e-19366.73T-complex protein 1 subunit zeta [Saprolegnia dicl... [more]
XP_012205386.16.100e-19366.55T-complex protein 1 subunit zeta [Saprolegnia para... [more]
XP_008871441.17.900e-19365.31T-complex protein 1, zeta subunit [Aphanomyces inv... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL059nonsL059Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR054ncniR054Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR094ngnoR094Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK004860NSK004860Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO28G00600.1NO28G00600.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|606719gene_9161Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO28G00600.1NO28G00600.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO28G00600 ID=NO28G00600|Name=NO28G00600|organism=Nannochloropsis oceanica|type=gene|length=3201bp
ATGGCCGCCGCTACGCGTCTGGTAAATCCGAGTGCGGAAATCGTCTCCAA
GTCGCAGGCGTTGCTGGTAAATTGCTCCGCCGCCAAGGGCCTCCAGAATG
TGCTGAAAACGAATTTGGgtaagtggaagtggtcacccagagaggaaggg
agagacggtcttaaacaacatttcagcatggaggatgaggagcgtgcttt
catgttcgatgctatatgggctggaagcatgtttgtgatgctacaaaacg
gaggccgcaggatggccgaactagaatctgggaagggggcagggaatgat
gatcaagcacctcgcctcgtctttcccccatccccagcattccgttttaa
gacccgcgagggatacacaaatggtggcaggctatgcgggtcgtacaaag
atgaccaccatggaaagcaacttttactgacccatcccttccttcctccc
ttctttccctcccatcctccctcgctctctcctcccccagGCCCTCGGGG
CACCTTGAAAATGCTTGTGGGAGGCGCTGGTCAAATCAAGATCACCAAGG
ACGGTAACGTTCTGCTACATGAGATGCAAATTCAGCACCCTACGGCATCC
CTTATCGCTCGCACTGCCACTGCCCAAGATGATATCACGgtacgtgtttt
tttcctctttcgatccctgtatccatacatccatacatccatgtatccac
atatttccacatatcaaatgtctctccctattttacttgtctccctacct
tccctaactcccttatcttcctatatcatcgctcctaaccctttcttaag
aagtccttgcagtcgcccactgcttgctgctcctcacctctaactccctc
ccactctccctccctcccttaaccccgacacggtgacggtcccaccatcg
gcatcctgcttcggggcttattgcgaaatcaagcataacactacttcttc
caaaacccgctcaccctgcctttcatctctccctctttccctccccccct
ccctccttcccaccagGGCGACGGCACCACCACTAGTGTCCTTCTCGTCG
GCGAGCTGCTCAAGCAAGCGGAGCGTTATCTGTCGGAGGGACTGCATCCC
CGTGTCATCGCCGACGGCTATGACCTTGCCAAGGAACAGGTGCTTTCATT
CTTAGAGACCTTCAAGgtacgttgttgcatgcccccagtgaggcatgttg
gcggatgtccctccttcgctctcttcctggccagctccttctttttctcc
ttctccttctttcccgcctaacgattgtaaactcttcttcatcgcccgca
cctccctccgcaccaagcgccgttgacccctatcctctccctccctctct
ccctccctctctccctccctctctccctccctccctccctccctctctcc
ctccctctctccctccctctctcccttccatccacagGTGCAACACCCGG
ACATCCTCAACGACCGTGAGCTCCTCCTCTCCATCGCCCGGACCTCCCTC
CGCACCAAGCTTGCTGAGGAAATGGCCGATAAAATGACCGAAGCCGTTAC
TGATGCCGTCCTCACCCTCGCCCAGGGAAGGGAGGAAGGGCAGGGGCAGC
CGGGGCCGATTGATTTACACATGGTGGAGATCATGCACATGACGCATAAA
ATGGGGAGTGACAGTCGGTTCGTCCGAGGGCTGGTGATGGACCACGGGGC
CAGGCATCCGGACATGCCCAAGTCTCTGGAGAGGTGCCATATATTCACCT
GCAACGTGTCGTTTGAGTATGAGAAGACgtgagtactaggaggacggctc
acacgagtacttcttgtctctattgtaaatcctttcttttcttaatcccg
ctgctttctttgctgtctcaatctgtttgaataagcgttcgctatcttct
tctttcttcgtcttgatcaccttactccgtccctccctatctccttcgct
ccatccccgagTGAGGTCGCCTCCGGTTTCTTCTACTCCAACGCCGAGGA
GCGCGAAAAGCTTGTCGCGTCCGAGCGGCGATTTACGGACGAGAAGGTCA
AGCAGGTGATCAATTTCAAGCGCAAGgtacataaaccaacctctccctcc
ctccctccctccctctctgattttcctttctcctcttgcttgttttacca
agcgccaaactcaatcataacatacaattatccagaaaagaaaacaaatt
aacgaataaataaacaaaagattaaacgaaaccaacaaatcgattcttca
attttctccagGTGTGCAAGGACGGCGAATCTTTCGTCGTCATCAACCAA
AAAGGCATCGATCCCCTCTCCCTTGACCTCTTCGCAAAGGAAGGAATCCT
GGCCTTGCGTCGTGCCAAGCGCCGCAACATGGAGCGTCTGACATTGGCCT
GTGGCGGTTTTCCCATCAATTCGGTCGAGGACCTGAGCGAGGACATGCTG
GGATGGGCGGGCAAGGTCTACGAGCAGACGCTGGGCGATGAGAAGTACAC
GTTTGTGGAAGATGTGAAGCACGCCCGAAGTTGCACCATTCTGATCAAAG
gtgagtgtcacttcttttcttctcccattacttaaattttggtcttcaaa
ataatgagacaaggaagcaattgtgtagagcgttgcctaaaaccctgaca
acaagtattacacatgtctaacggacagccaccaacatatgtctgaattc
cctccctctcccacagGCCCGAACCAGCACACCATCGACCAGATTAAAGA
CGCCCTTCGCGACGGACTCCGGGCCGTCAAAAACGCCATCGAGGACCAAG
CCCTCATCCCCGGTGGCGGTGCCTTTGAAGTCGCTGCCTCACACATGCTT
CAGTCTTACAAGGAGACAGTCACGGGCAAGCCCAAGCTGGGTGTTGCGGC
TTACGCGGACGCCCTGCTAGTGGTCCCTAAGACTCTGGCTGAAAACTCGG
GTTTTGACGTCCAAGACACTTTGATAGCGCTCTTGGAGGAACACGCGCGC
ACGGGCTTGCCGGTGGGGTTGGATGTGACGACGGGCGAGGGGATGTCCCC
GGCAATGGTTGGTGTATGGGACAACCATCGAGTGAAGCGACAGAGTTTGC
ATTTGGCAACGATTTTGGCGACGCAGTTGTTGGTTGTCGATGAGGTGATG
CGCGCGGGGAGGCAGATGGGGAGGGCATCGGGGGGAGGAGAGGAAGAGTA
A
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protein sequence of NO28G00600.1

>NO28G00600.1-protein ID=NO28G00600.1-protein|Name=NO28G00600.1|organism=Nannochloropsis oceanica|type=polypeptide|length=549bp
MAAATRLVNPSAEIVSKSQALLVNCSAAKGLQNVLKTNLGPRGTLKMLVG
GAGQIKITKDGNVLLHEMQIQHPTASLIARTATAQDDITGDGTTTSVLLV
GELLKQAERYLSEGLHPRVIADGYDLAKEQVLSFLETFKVQHPDILNDRE
LLLSIARTSLRTKLAEEMADKMTEAVTDAVLTLAQGREEGQGQPGPIDLH
MVEIMHMTHKMGSDSRFVRGLVMDHGARHPDMPKSLERCHIFTCNVSFEY
EKTEVASGFFYSNAEEREKLVASERRFTDEKVKQVINFKRKVCKDGESFV
VINQKGIDPLSLDLFAKEGILALRRAKRRNMERLTLACGGFPINSVEDLS
EDMLGWAGKVYEQTLGDEKYTFVEDVKHARSCTILIKGPNQHTIDQIKDA
LRDGLRAVKNAIEDQALIPGGGAFEVAASHMLQSYKETVTGKPKLGVAAY
ADALLVVPKTLAENSGFDVQDTLIALLEEHARTGLPVGLDVTTGEGMSPA
MVGVWDNHRVKRQSLHLATILATQLLVVDEVMRAGRQMGRASGGGEEE*
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Synonyms
Publications