NO28G00590, NO28G00590 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO28G00590 vs. NCBI_GenBank
Match: EWM20929.1 (t-complex protein 1 subunit zeta isoform a [Nannochloropsis gaditana]) HSP 1 Score: 144.4 bits (363), Expect = 5.000e-31 Identity = 72/125 (57.60%), Postives = 84/125 (67.20%), Query Frame = 0 Query: 51 ISNEPFYSSLLNPPITFSFESEIKKAIRSCHTMANSIEGTSLHQKF----------------FLTGQVGQGLILFKDQDGCWSAPAAVGAIGGGIGLQGGGDITDYVLFFKTPDAQEAMKGGCQL 160 ++ EPF+ + LN PITFSFESEIKKA+RSCH M S E L FLTGQ G GL+L KD +G WSAPA VGA+GGG+GLQ GG++TDYVLFFKT +AQEAMKG QL Sbjct: 611 VAQEPFWKAYLNSPITFSFESEIKKAVRSCHNMQASPEAPVLRSLLKQCDGLLFLTVARAGCFLTGQAGSGLVLLKDSEGNWSAPACVGAVGGGVGLQAGGEVTDYVLFFKTEEAQEAMKGATQL 735
BLAST of NO28G00590 vs. NCBI_GenBank
Match: CBN74194.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 111.7 bits (278), Expect = 3.600e-21 Identity = 70/225 (31.11%), Postives = 113/225 (50.22%), Query Frame = 0 Query: 58 SSLLNPPITFSFESEIKKAIRSCHTMANS--IEGTSLHQK-----------------FFLTGQVGQGLILFKDQDGCWSAPAAVGAIGGGIGLQGGGDITDYVLFFKTPDAQEAMKGGCQLAVGVSGGIAAGPVGRSGVWQYHWRLDTCDVGCVWAFSGSKGWYAGGALTLQLLCGLGWMNEQMYGKKREGGXXXXXXXXXRLADILGGKVGPPLEAQELYKCLE 264 +S LN PI F+ +E++KA + H + I+ S+ Q+ F + G+VG GL++ K +G WSAP+A+ +G G G GG+ITD+VL T A EA G Q+++G +A GPVGR+G + V +++S S+G +AG +L ++ +N + YG++ + D+L G V PP A+ LY+ L+ Sbjct: 319 ASYLNRPIVFTLGAEVRKAAYTIHNFSKEGMIQDQSIPQELLSRAKGLAFLTVIKGGFIVAGRVGTGLVISKTDEGVWSAPSAIATLGMGWGALIGGEITDFVLVLNTDAALEAFSGRGQVSIGAELSVAVGPVGRTGAGNVSVAAE--GVAHAYSYSHSRGLFAGLSLEGGVIVSRPDVNRKFYGRQ------------VSVRDLLSGSVAPPPAARPLYEALD 529
BLAST of NO28G00590 vs. NCBI_GenBank
Match: OMJ08919.1 (SH3 domain-containing YSC84-like protein 1 [Smittium culicis]) HSP 1 Score: 107.1 bits (266), Expect = 8.800e-20 Identity = 64/166 (38.55%), Postives = 86/166 (51.81%), Query Frame = 0 Query: 98 LTGQVGQGLILFKDQDGCWSAPAAVGAIGGGIGLQGGGDITDYVLFFKTPDAQEAMKGGCQLAVGVSGGIAAGPVGRSGVWQYHWRLDTCDVGCVWAFSGSKGWYAGGALTLQLLCGLGWMNEQMYGKKREGGXXXXXXXXXRLADILGGKVGPPLEAQELYKCLE 264 +TG G GL++ K G WSAP+A+G G G G Q G +ITD+V+ T A EA G L +G S GIAAGPVG W D V+++S SKG +AG +L ++ NE+ YG K A++L GK+ PP +AQ LY +E Sbjct: 26 MTGSAGSGLVVAKLPSGKWSAPSAIGTAGIGFGSQIGAEITDFVMILNTDSAVEAFSHGGNLTLGASIGIAAGPVG----WSAEAGGAVVDTAPVFSYSKSKGLFAGISLEGSVIIERKGTNERFYGVK------------VSAAELLSGKIDPPPKAQRLYDAIE 175
BLAST of NO28G00590 vs. NCBI_GenBank
Match: OMJ26539.1 (SH3 domain-containing protein [Smittium culicis]) HSP 1 Score: 105.1 bits (261), Expect = 3.300e-19 Identity = 67/203 (33.00%), Postives = 106/203 (52.22%), Query Frame = 0 Query: 61 LNPPITFSFESEIKKAIRSCHTMANSIEGTSLHQKFFLTGQVGQGLILFKDQDGCWSAPAAVGAIGGGIGLQGGGDITDYVLFFKTPDAQEAMKGGCQLAVGVSGGIAAGPVGRSGVWQYHWRLDTCDVGCVWAFSGSKGWYAGGALTLQLLCGLGWMNEQMYGKKREGGXXXXXXXXXRLADILGGKVGPPLEAQELYKCLE 264 LN PI S E +KA + + + T + F +G+VG GL+ + DG WSAP+A+G G G G Q G ++TD+V+ T A +A G + +G + G++AGP GRS + L +V V+++S SKG +AG +L ++ NE+ YG++ +D+L GK+ PP +A LY+ +E Sbjct: 3 LNSPIPASLAKECEKAAKVLNAFIAIL--TVIKAGFIWSGRVGSGLVFARLPDGRWSAPSAIGTAGVGFGGQIGAELTDFVMILNTKSAVKAFSHGGNVTLGGNIGVSAGPFGRSA--EVSGAL--INVAPVFSYSKSKGLFAGVSLEGSVILERKDANEKFYGRR------------VTASDLLTGKIDPPPQASALYRAIE 187
BLAST of NO28G00590 vs. NCBI_GenBank
Match: XP_009828162.1 (hypothetical protein, variant 1 [Aphanomyces astaci] >ETV82493.1 hypothetical protein, variant 1 [Aphanomyces astaci]) HSP 1 Score: 103.6 bits (257), Expect = 9.700e-19 Identity = 72/232 (31.03%), Postives = 107/232 (46.12%), Query Frame = 0 Query: 53 NEPFYSSLLNPPITFSFESEIKKAIRSCHT---------------MANSIEG----TSLHQKFFLTGQVGQGLILFKDQDGCWSAPAAVGAIGGGIGLQGGGDITDYVLFFKTPDAQEAMKGGCQLAVGVSGGIAAGPVGRSGVWQYHWRLDTCDVGCVWAFSGSKGWYAGGALTLQLLCGLGWMNEQMYGKKREGGXXXXXXXXXRLADILGGKVGPPLEAQELYKCLEGL 266 NE LN P +F+ E++KA S + + +G T L F +TG++G GL+L K DG WSAP+A+ G G G Q GG++TD+V+ T A + Q+ +G G+AAGPVGR V +++S SKG + G +L ++ +N + YGK A++LGG+ PP+ AQ LY LE + Sbjct: 132 NEAGSKRFLNSPYSFTLREEVRKAAYSIKNFMLDGVIKDQSIPLPLLTNAQGIAFLTVLKVGFVVTGRLGTGLVLSKLPDGSWSAPSAIATAGIGWGAQIGGEVTDFVIILNTRGAVDTFCAQGQVNLGAELGVAAGPVGRVAAGAV--EAGPGGVAPCYSYSHSKGLFIGISLEGSVVMARPDVNREFYGK------------DITAAELLGGRERPPVAAQPLYDALEAV 349
BLAST of NO28G00590 vs. NCBI_GenBank
Match: XP_009828164.1 (hypothetical protein, variant 3 [Aphanomyces astaci] >ETV82495.1 hypothetical protein, variant 3 [Aphanomyces astaci]) HSP 1 Score: 103.6 bits (257), Expect = 9.700e-19 Identity = 72/232 (31.03%), Postives = 107/232 (46.12%), Query Frame = 0 Query: 53 NEPFYSSLLNPPITFSFESEIKKAIRSCHT---------------MANSIEG----TSLHQKFFLTGQVGQGLILFKDQDGCWSAPAAVGAIGGGIGLQGGGDITDYVLFFKTPDAQEAMKGGCQLAVGVSGGIAAGPVGRSGVWQYHWRLDTCDVGCVWAFSGSKGWYAGGALTLQLLCGLGWMNEQMYGKKREGGXXXXXXXXXRLADILGGKVGPPLEAQELYKCLEGL 266 NE LN P +F+ E++KA S + + +G T L F +TG++G GL+L K DG WSAP+A+ G G G Q GG++TD+V+ T A + Q+ +G G+AAGPVGR V +++S SKG + G +L ++ +N + YGK A++LGG+ PP+ AQ LY LE + Sbjct: 132 NEAGSKRFLNSPYSFTLREEVRKAAYSIKNFMLDGVIKDQSIPLPLLTNAQGIAFLTVLKVGFVVTGRLGTGLVLSKLPDGSWSAPSAIATAGIGWGAQIGGEVTDFVIILNTRGAVDTFCAQGQVNLGAELGVAAGPVGRVAAGAV--EAGPGGVAPCYSYSHSKGLFIGISLEGSVVMARPDVNREFYGK------------DITAAELLGGRERPPVAAQPLYDALEAV 349
BLAST of NO28G00590 vs. NCBI_GenBank
Match: XP_009525981.1 (hypothetical protein PHYSODRAFT_544695 [Phytophthora sojae] >EGZ16923.1 hypothetical protein PHYSODRAFT_544695 [Phytophthora sojae]) HSP 1 Score: 102.8 bits (255), Expect = 1.700e-18 Identity = 75/222 (33.78%), Postives = 106/222 (47.75%), Query Frame = 0 Query: 62 NPPITFSFESEIKKAIRSCH------------------TMANSIEG-TSLHQKFFLTGQVGQGLILFKDQDGCWSAPAAVGAIGGGIGLQGGGDITDYVLFFKTPDAQEAMKGGCQLAVGVSGGIAAGPVGR--SGVWQYHWRLDTCDVGCVWAFSGSKGWYAGGALTLQLLCGLGWMNEQMYGKKREGGXXXXXXXXXRLADILGGKVGPPLEAQELYKCL 263 N P +F+ EI+KA S T A I T + F TG++G GL++ + DG WSAP+A+G G G G Q GG+ITD+V+ T A EA Q+ +G GI+AGPVGR SG + + DV +++S SKG YAG +L ++ +N YGK +A++LGG PP+ A LY + Sbjct: 123 NSPYSFTLREEIRKATYSVKNFTFQGVVKDQSIPLPLLTHARGIAFLTVIKMGFVFTGRMGTGLVVARLPDGRWSAPSAIGTAGVGWGPQIGGEITDFVIILNTQRAVEAFCASGQVNLGAELGISAGPVGRVASGALE---ASASMDVAPCYSYSHSKGLYAGISLEGSVILSRSDINRSFYGK------------AVTVAELLGGVEPPPVAAAPLYDAI 329
BLAST of NO28G00590 vs. NCBI_GenBank
Match: POM68250.1 (Hypothetical protein PHPALM_15616 [Phytophthora palmivora var. palmivora]) HSP 1 Score: 102.4 bits (254), Expect = 2.200e-18 Identity = 74/222 (33.33%), Postives = 109/222 (49.10%), Query Frame = 0 Query: 62 NPPITFSFESEIKKAIRSC--HTMANSIEGTSL------HQK-----------FFLTGQVGQGLILFKDQDGCWSAPAAVGAIGGGIGLQGGGDITDYVLFFKTPDAQEAMKGGCQLAVGVSGGIAAGPVGR--SGVWQYHWRLDTCDVGCVWAFSGSKGWYAGGALTLQLLCGLGWMNEQMYGKKREGGXXXXXXXXXRLADILGGKVGPPLEAQELYKCL 263 N P +F+ EI+KA S T ++ S+ H K F TG++G GL++ + DG WSAP+A+G G G G Q GG+ITD+V+ T A EA Q+ +G GI+AGPVGR SG + + DV +++S SKG +AG +L ++ +N YGK ++D+LGG PP+ A LY+ + Sbjct: 123 NSPYSFTLREEIRKATYSVKNFTFQGVVKDQSIPLPLLTHAKGIAFLTVIKMGFVFTGRMGTGLVVARLPDGRWSAPSAIGTAGVGWGPQIGGEITDFVIILNTQRAVEAFCASGQVNLGAELGISAGPVGRVASGALE---ASASMDVAPCYSYSHSKGLFAGISLEGSVILSRPDINRSFYGK------------AVAVSDLLGGVEPPPVAAAPLYEAI 329
BLAST of NO28G00590 vs. NCBI_GenBank
Match: ETI45952.1 (hypothetical protein F443_09591 [Phytophthora parasitica P1569]) HSP 1 Score: 101.7 bits (252), Expect = 3.700e-18 Identity = 74/222 (33.33%), Postives = 108/222 (48.65%), Query Frame = 0 Query: 62 NPPITFSFESEIKKAIRSC--HTMANSIEGTSL------HQK-----------FFLTGQVGQGLILFKDQDGCWSAPAAVGAIGGGIGLQGGGDITDYVLFFKTPDAQEAMKGGCQLAVGVSGGIAAGPVGR--SGVWQYHWRLDTCDVGCVWAFSGSKGWYAGGALTLQLLCGLGWMNEQMYGKKREGGXXXXXXXXXRLADILGGKVGPPLEAQELYKCL 263 N P +F+ EI+KA S T ++ S+ H K F TG++G GL++ + DG WSAP+A+G G G G Q GG+ITD+V+ T A EA Q+ +G GI+AGPVGR SG + + DV +++S SKG YAG +L ++ +N YGK + ++LGG PP+ A LY+ + Sbjct: 150 NSPYSFTLREEIRKATYSVKNFTFQGVVKDQSIPLPLLTHAKGIAFLTVIKVGFVFTGRMGTGLVVARLPDGRWSAPSAIGTAGVGWGPQIGGEITDFVIILNTQRAVEAFCASGQVNLGAELGISAGPVGRVASGALE---ASASMDVAPCYSYSHSKGLYAGISLEGSVILSRPDINRSFYGK------------AVTVPELLGGVEPPPVAATPLYEAI 356
BLAST of NO28G00590 vs. NCBI_GenBank
Match: ETK85951.1 (hypothetical protein L915_09386 [Phytophthora parasitica] >ETL39359.1 hypothetical protein L916_09290 [Phytophthora parasitica] >ETL92510.1 hypothetical protein L917_09223 [Phytophthora parasitica] >ETP15780.1 hypothetical protein F441_09523 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 101.7 bits (252), Expect = 3.700e-18 Identity = 74/222 (33.33%), Postives = 108/222 (48.65%), Query Frame = 0 Query: 62 NPPITFSFESEIKKAIRSC--HTMANSIEGTSL------HQK-----------FFLTGQVGQGLILFKDQDGCWSAPAAVGAIGGGIGLQGGGDITDYVLFFKTPDAQEAMKGGCQLAVGVSGGIAAGPVGR--SGVWQYHWRLDTCDVGCVWAFSGSKGWYAGGALTLQLLCGLGWMNEQMYGKKREGGXXXXXXXXXRLADILGGKVGPPLEAQELYKCL 263 N P +F+ EI+KA S T ++ S+ H K F TG++G GL++ + DG WSAP+A+G G G G Q GG+ITD+V+ T A EA Q+ +G GI+AGPVGR SG + + DV +++S SKG YAG +L ++ +N YGK + ++LGG PP+ A LY+ + Sbjct: 155 NSPYSFTLREEIRKATYSVKNFTFQGVVKDQSIPLPLLTHAKGIAFLTVIKVGFVFTGRMGTGLVVARLPDGRWSAPSAIGTAGVGWGPQIGGEITDFVIILNTQRAVEAFCASGQVNLGAELGISAGPVGRVASGALE---ASASMDVAPCYSYSHSKGLYAGISLEGSVILSRPDINRSFYGK------------AVTVPELLGGVEPPPVAATPLYEAI 361 The following BLAST results are available for this feature:
BLAST of NO28G00590 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO28G00590 ID=NO28G00590|Name=NO28G00590|organism=Nannochloropsis oceanica|type=gene|length=2059bpback to top protein sequence of NO28G00590.1 >NO28G00590.1-protein ID=NO28G00590.1-protein|Name=NO28G00590.1|organism=Nannochloropsis oceanica|type=polypeptide|length=268bpback to top Synonyms
Publications
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