NO28G00530, NO28G00530 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO28G00530 vs. NCBI_GenBank
Match: EWM20949.1 (transcriptional activator myb [Nannochloropsis gaditana]) HSP 1 Score: 346.3 bits (887), Expect = 2.600e-91 Identity = 155/198 (78.28%), Postives = 177/198 (89.39%), Query Frame = 0 Query: 238 ILEALSKSVPIPKDYKAPKKQRKTPIASVKWSKIEDEKLRQIVAVQGAKNWRKIAEILSCPGRTDVSCQHRWNKVLRPGLKRGAWTEQEDEVVKRMVVQVGVDDIKWSAVADACPGRMGKQCRERWFNHLDPEIKREEWEEKEDRILFETHMVLGNRWTEIAKFVPGRTENAVKNRFNSATFRMWVKGQGLTLRAPGA 436 ILE L KS+PIPK+Y APKK RK P+ASVKW+ EDE+LR++VA QGAKNWR++AEIL CPGRTDVSCQHRWNKVLRPGLKRGAWTE+ED VVK+MV+ G+++I+WS VADACPGRMGKQCRERWFNHLDP+I R EW +EDRIL+ETH+V GNRWTEIAKFVPGRTENAVKNRFNSATF+ WV+ QGL LRAPGA Sbjct: 219 ILEVLGKSIPIPKNYTAPKKPRKQPVASVKWTAEEDERLREVVAAQGAKNWRRVAEILDCPGRTDVSCQHRWNKVLRPGLKRGAWTEEEDAVVKKMVMATGLEEIRWSVVADACPGRMGKQCRERWFNHLDPDINRAEWSPEEDRILYETHLVFGNRWTEIAKFVPGRTENAVKNRFNSATFKNWVRAQGLVLRAPGA 416
BLAST of NO28G00530 vs. NCBI_GenBank
Match: XP_005854914.1 (myb proto-oncogene protein, partial [Nannochloropsis gaditana CCMP526] >EKU21443.1 myb proto-oncogene protein, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 292.0 bits (746), Expect = 5.800e-75 Identity = 129/164 (78.66%), Postives = 148/164 (90.24%), Query Frame = 0 Query: 250 KDYKAPKKQRKTPIASVKWSKIEDEKLRQIVAVQGAKNWRKIAEILSCPGRTDVSCQHRWNKVLRPGLKRGAWTEQEDEVVKRMVVQVGVDDIKWSAVADACPGRMGKQCRERWFNHLDPEIKREEWEEKEDRILFETHMVLGNRWTEIAKFVPGRTENAVKNR 414 K+Y APKK RK P+ASVKW+ EDE+LR++VA QGAKNWR++AEIL CPGRTDVSCQHRWNKVLRPGLKRGAWTE+ED VVK+MV+ G+++I+WS VADACPGRMGKQCRERWFNHLDP+I R EW +EDRIL+ETH+V GNRWTEIAKFVPGRTENAVKNR Sbjct: 1 KNYTAPKKPRKQPVASVKWTAEEDERLREVVAAQGAKNWRRVAEILDCPGRTDVSCQHRWNKVLRPGLKRGAWTEEEDAVVKKMVMATGLEEIRWSVVADACPGRMGKQCRERWFNHLDPDINRAEWSPEEDRILYETHLVFGNRWTEIAKFVPGRTENAVKNR 164
BLAST of NO28G00530 vs. NCBI_GenBank
Match: CBJ30691.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 211.1 bits (536), Expect = 1.300e-50 Identity = 95/157 (60.51%), Postives = 115/157 (73.25%), Query Frame = 0 Query: 267 KWSKIEDEKLRQIVAVQGAKNWRKIAEILSCPGRTDVSCQHRWNKVLRPGLKRGAWTEQEDEVVKRMVVQVGVDDIKWSAVADACPGRMGKQCRERWFNHLDPEIKREEWEEKEDRILFETHMVLGNRWTEIAKFVPGRTENAVKNRFNSATFRMWV 424 KW+K ED +LR+IV GA+NWR +AE L R+DV C HRWNKVLRPGL +G WTE+ED +V+ V G +KWS VA PGR+GKQCRERWFNHLDP IK+ EW +EDRI+F +GNRW EIAK +PGRTENAVKNRFNS+ + W+ Sbjct: 96 KWTKEEDTRLREIVEHHGARNWRMVAEQLGTL-RSDVQCLHRWNKVLRPGLHKGPWTEEEDSIVRECVEHSGAQKVKWSVVASRLPGRIGKQCRERWFNHLDPSIKKGEWSPEEDRIVFGAQAYMGNRWCEIAKLLPGRTENAVKNRFNSSARKKWL 251
BLAST of NO28G00530 vs. NCBI_GenBank
Match: XP_009036871.1 (hypothetical protein AURANDRAFT_7821, partial [Aureococcus anophagefferens] >EGB08368.1 hypothetical protein AURANDRAFT_7821, partial [Aureococcus anophagefferens]) HSP 1 Score: 209.9 bits (533), Expect = 2.900e-50 Identity = 95/151 (62.91%), Postives = 119/151 (78.81%), Query Frame = 0 Query: 267 KWSKIEDEKLRQIVAVQGAKNWRKIAEILSCPGRTDVSCQHRWNKVLRPGLKRGAWTEQEDEVVKRMVVQVGVDDIKWSAVADACPGRMGKQCRERWFNHLDPEIKREEWEEKEDRILFETHMVLGNRWTEIAKFVPGRTENAVKNRFNSA 418 KW++ ED +LR+IV GAKNW+++A +L R+DV C HRWNKVLRPGL +G WT ED++VK MV++ G +IKWS +A PGR+GKQCRERWFNHLDPEIK+ +W +ED ILFET V GNRW+EIAK +PGRTENAVKNR+NS+ Sbjct: 1 KWTEEEDNRLREIVETFGAKNWKRLAMLLG-NVRSDVQCLHRWNKVLRPGLSKGPWTADEDKIVKDMVLRHGAGNIKWSVIAAQLPGRIGKQCRERWFNHLDPEIKKGDWTPEEDNILFETQRVHGNRWSEIAKLLPGRTENAVKNRWNSS 150
BLAST of NO28G00530 vs. NCBI_GenBank
Match: GBG27598.1 (Transcription factor MYB3R-4 [Aurantiochytrium sp. FCC1311]) HSP 1 Score: 207.2 bits (526), Expect = 1.900e-49 Identity = 92/154 (59.74%), Postives = 115/154 (74.68%), Query Frame = 0 Query: 267 KWSKIEDEKLRQIVAVQGAKNWRKIAEILSCPGRTDVSCQHRWNKVLRPGLKRGAWTEQEDEVVKRMVVQVGVDDIKWSAVADACPGRMGKQCRERWFNHLDPEIKREEWEEKEDRILFETHMVLGNRWTEIAKFVPGRTENAVKNRFNSATFR 421 +W ED LRQ VA GAKNW+KI+++ RTDV C HRW KVL+PGL +G+WT++ED VV RMV + G+ +IKWS +A+ PGR+GKQCRERWFNHLDP +K+E W +EDRIL E LGNRW +IA +PGR+ENAVKNR+NSA R Sbjct: 160 RWGPEEDNILRQTVAEMGAKNWKKISQVAFGGRRTDVQCLHRWQKVLKPGLVKGSWTKEEDAVVMRMVEKYGLGNIKWSVIANQLPGRLGKQCRERWFNHLDPSLKKEPWSAEEDRILMEAQSTLGNRWCQIASLIPGRSENAVKNRWNSAMRR 313
BLAST of NO28G00530 vs. NCBI_GenBank
Match: GAY01574.1 (myb-like DNA-binding protein, putative [Pythium insidiosum]) HSP 1 Score: 199.5 bits (506), Expect = 3.900e-47 Identity = 91/164 (55.49%), Postives = 116/164 (70.73%), Query Frame = 0 Query: 266 VKWSKIEDEKLRQIVAVQGAKNWRKIAEILSCPGRTDVSCQHRWNKVLRPGLKRGAWTEQEDEVVKRMVVQVGVDDIKWSAVADACPGRMGKQCRERWFNHLDPEIKREEWEEKEDRILFETHMVLGNRWTEIAKFVPGRTENAVKNRFNSATFRMWVKGQGLT 430 VKW+K ED +LR+ V G KNW++IAE L GRTDV C HRWNKVL+PGL +G WT +ED V+ ++ + GV I+W +A PGR+GKQCRERW NHLD I++ +W +ED ++F LGN+W+EIAK +PGRTENAVKNRFNSA R W+ Q T Sbjct: 138 VKWTKEEDARLREAVQRFGGKNWKRIAETL-XHGRTDVQCLHRWNKVLKPGLVKGPWTPEEDRVLLSLIKRYGVGKIRWCDIALHLPGRIGKQCRERWCNHLDSSIRKGQWTPEEDELVFSLQQQLGNKWSEIAKMLPGRTENAVKNRFNSAARRKWLMAQAAT 300
BLAST of NO28G00530 vs. NCBI_GenBank
Match: XP_024578129.1 (transcriptional activator myb-like [Plasmopara halstedii] >CEG41760.1 transcriptional activator myb-like [Plasmopara halstedii]) HSP 1 Score: 194.5 bits (493), Expect = 1.300e-45 Identity = 89/163 (54.60%), Postives = 114/163 (69.94%), Query Frame = 0 Query: 264 ASVKWSKIEDEKLRQIVAVQGAKNWRKIAEILSCPGRTDVSCQHRWNKVLRPGLKRGAWTEQEDEVVKRMVVQVGVDDIKWSAVADACPGRMGKQCRERWFNHLDPEIKREEWEEKEDRILFETHMVLGNRWTEIAKFVPGRTENAVKNRFNSATFRMWVKGQ 427 A KW + EDE+LR VA G KNW+ IAE L GRTDV C HRWNKVL+PGL +G WT +ED ++ ++ + GV I+W +A PGR+GKQCRERW NHLD I++ +W +ED ++F LGN+W+EIAK +PGRTENAVKNR+NSA R W+ Q Sbjct: 365 APTKWLRDEDERLRVAVARFGGKNWKMIAETLG-NGRTDVQCLHRWNKVLKPGLIKGPWTPEEDRILTSLITRYGVGKIRWCDLALHLPGRIGKQCRERWCNHLDSRIRKGQWTAEEDDMVFRWQQKLGNKWSEIAKLLPGRTENAVKNRYNSAARRKWLMNQ 526
BLAST of NO28G00530 vs. NCBI_GenBank
Match: XP_008898673.1 (hypothetical protein PPTG_06498 [Phytophthora parasitica INRA-310] >ETI31208.1 hypothetical protein F443_21792 [Phytophthora parasitica P1569] >ETK71608.1 hypothetical protein L915_21185 [Phytophthora parasitica] >ETL25049.1 hypothetical protein L916_21057 [Phytophthora parasitica] >ETL78262.1 hypothetical protein L917_20913 [Phytophthora parasitica] >ETM31526.1 hypothetical protein L914_20927 [Phytophthora parasitica] >ETN16334.1 hypothetical protein PPTG_06498 [Phytophthora parasitica INRA-310] >ETO59930.1 hypothetical protein F444_21814 [Phytophthora parasitica P1976] >ETP01027.1 hypothetical protein F441_21673 [Phytophthora parasitica CJ01A1] >ETP29165.1 hypothetical protein F442_21650 [Phytophthora parasitica P10297]) HSP 1 Score: 193.7 bits (491), Expect = 2.100e-45 Identity = 91/175 (52.00%), Postives = 120/175 (68.57%), Query Frame = 0 Query: 253 KAPKKQRKTPIAS-VKWSKIEDEKLRQIVAVQGAKNWRKIAEILSCPGRTDVSCQHRWNKVLRPGLKRGAWTEQEDEVVKRMVVQVGVDDIKWSAVADACPGRMGKQCRERWFNHLDPEIKREEWEEKEDRILFETHMVLGNRWTEIAKFVPGRTENAVKNRFNSATFRMWVKGQ 427 K P+ + + + + KW + EDE+LR VA G KNW+ IAE L GRTDV C HRWNKVL+PGL +G WT +ED ++ ++ + GV I+W +A PGR+GKQCRERW NHLD I++ +W +ED ++F LGN+W+EIAK +PGRTENAVKNRFNSA R W+ Q Sbjct: 373 KTPQSKGASAVQTPTKWLRDEDERLRVAVARFGGKNWKMIAETLG-NGRTDVQCLHRWNKVLKPGLIKGPWTPEEDRILTSLITRYGVGKIRWCDLALHLPGRIGKQCRERWCNHLDSRIRKGQWTPEEDDMVFRWQQKLGNKWSEIAKLLPGRTENAVKNRFNSAARRKWLMNQ 546
BLAST of NO28G00530 vs. NCBI_GenBank
Match: KUF81963.1 (NifU protein 5 [Phytophthora nicotianae]) HSP 1 Score: 193.7 bits (491), Expect = 2.100e-45 Identity = 91/175 (52.00%), Postives = 120/175 (68.57%), Query Frame = 0 Query: 253 KAPKKQRKTPIAS-VKWSKIEDEKLRQIVAVQGAKNWRKIAEILSCPGRTDVSCQHRWNKVLRPGLKRGAWTEQEDEVVKRMVVQVGVDDIKWSAVADACPGRMGKQCRERWFNHLDPEIKREEWEEKEDRILFETHMVLGNRWTEIAKFVPGRTENAVKNRFNSATFRMWVKGQ 427 K P+ + + + + KW + EDE+LR VA G KNW+ IAE L GRTDV C HRWNKVL+PGL +G WT +ED ++ ++ + GV I+W +A PGR+GKQCRERW NHLD I++ +W +ED ++F LGN+W+EIAK +PGRTENAVKNRFNSA R W+ Q Sbjct: 1358 KTPQSKGASAVQTPTKWLRDEDERLRVAVARFGGKNWKMIAETLG-NGRTDVQCLHRWNKVLKPGLIKGPWTPEEDRILTSLITRYGVGKIRWCDLALHLPGRIGKQCRERWCNHLDSRIRKGQWTPEEDDMVFRWQQKLGNKWSEIAKLLPGRTENAVKNRFNSAARRKWLMNQ 1531
BLAST of NO28G00530 vs. NCBI_GenBank
Match: GAX20402.1 (myb proto-oncogene protein [Fistulifera solaris]) HSP 1 Score: 193.0 bits (489), Expect = 3.700e-45 Identity = 91/155 (58.71%), Postives = 110/155 (70.97%), Query Frame = 0 Query: 267 KWSKIEDEKLRQIVAVQGAKNWRKIAEILSCPGRTDVSCQHRWNKVLRPGLKRGAWTEQEDEVVKRMVVQVGVDDIKWSAVADACPGRMGKQCRERWFNHLDPEIKREEWEEKEDRILFETHMVLGNRWTEIAKFVPGRTENAVKNRFNSATFRM 422 KW++ ED+ LR+ V G KNW+KIA L PGR+DV C HRW KVLRPGL +G WT +EDE V RMV G KWS +A GR+GKQCRERW+NHLDP I + EW E+ED+IL H LGNRW EIAK +PGRT+NA+KNR+NS R+ Sbjct: 194 KWTEEEDDLLRRAVREHGGKNWKKIASCL--PGRSDVQCLHRWQKVLRPGLVKGPWTTEEDETVARMVHLHGTK--KWSQIARQLKGRLGKQCRERWYNHLDPNINKSEWTEREDQILIMAHEELGNRWAEIAKRLPGRTDNAIKNRWNSTLKRI 344 The following BLAST results are available for this feature:
BLAST of NO28G00530 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO28G00530 ID=NO28G00530|Name=NO28G00530|organism=Nannochloropsis oceanica|type=gene|length=3180bpback to top protein sequence of NO28G00530.1 >NO28G00530.1-protein ID=NO28G00530.1-protein|Name=NO28G00530.1|organism=Nannochloropsis oceanica|type=polypeptide|length=806bpback to top Synonyms
Publications
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