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Properties
| Property Name | Value |
|---|
| Description | Unknown protein |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| chr28 | genome | chr28:137111..143084 + |
Analyses
This gene is derived from or has results from the following analyses
Homology
BLAST of NO28G00360 vs. NCBI_GenBank
Match: EWM20957.1 (hypothetical protein Naga_102064g1 [Nannochloropsis gaditana]) HSP 1 Score: 125.6 bits (314), Expect = 1.600e-24 Identity = 106/184 (57.61%), Postives = 124/184 (67.39%), Query Frame = 0
Query: 1443 AVVKGRGEEGKHFLLLQDTIVCTCLLSAAATLSLGEGEEGMXXXXXXXXXXXXXXXXXSLQGREEICLFIQQLLVRNPAVLPFLLQRQDLPPSALLLLADCIPAFLXXXXXXXXXXXXXXXXXXXXXXXXXFLLHGTSLLANARGLAFLTEYCRRYPLQTVAFQAAHTAITTLLNKLLRPTVLQ 1627
A V + EG FLLLQ+TI+C CLL A TLS G+ E XXXXXXXXXXXXXXXXXS++GR ICLF+ LL +P VLP LL+R +L ALLLLADCIPAFL XXXXXXXF L GTSL+ +AR LA L E+ RRYPL AF++AH+AI LL++ LRP VLQ
Sbjct: 81 AAVVAKAGEGVRFLLLQETIICKCLLRVAVTLSGGDTAE-XXXXXXXXXXXXXXXXXXSVEGRGAICLFLSHLLSYHPPVLPLLLRRGELSSPALLLLADCIPAFL------------LFLPPSXXXXXXXFSLRGTSLVTHARDLAVLAEFIRRYPL-PAAFRSAHSAIIALLHRHLRPVVLQ 250
BLAST of NO28G00360 vs. NCBI_GenBank
Match: EWM20959.1 (hypothetical protein Naga_101659g1 [Nannochloropsis gaditana]) HSP 1 Score: 69.3 bits (168), Expect = 1.400e-7 Identity = 52/119 (43.70%), Postives = 63/119 (52.94%), Query Frame = 0
Query: 41 SPSVASSSSR--------LYHRMATRNLHPPPPSGQ--GRKEGGWVLEEEGLRPYLPSLLRILRSADDSKGLASGTSTLXXXXXXXXXXXXXXXXXXXXVLDKLMEIAIRFPVADTIEE 150
S S AS SR L+ RMA R+L PPP S + R E GWVL+++ L PYLP LLR+ R DD A S XXXXX V KLME+A+R+PVAD + E
Sbjct: 45 SSSDASGKSRKKRKIDGSLFRRMALRDLFPPPLSRKPVSRAEDGWVLDDKELSPYLPLLLRLFREMDD----AQEPSACTGDQGDGEXXXXXEGWSRAAVWQKLMEVAVRYPVADKVRE 159
The following BLAST results are available for this feature:
Relationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO28G00360 ID=NO28G00360|Name=NO28G00360|organism=Nannochloropsis oceanica|type=gene|length=5974bp
ATGGAGATTACAACCAATAAGCCGGCGCAGCTGCAACAACAGCAGCAGCA
GGTCAATCAGGACGAAGGTACGACGACTAGCACCGGCAGTAGTGGTAGGG
TGGGACGGAAGCGTGCCTTGTCCCCGTCTGTGGCCAGCAGCAGCAGCCGC
CTGTACCACCGCATGGCCACCCGGAATCTCCACCCTCCGCCTCCGTCAGG
ACAGGGAAGGAAGGAGGGAGGGTGGGTACTGGAAGAGGAGGGGCTTCGAC
CGTACTTGCCATCCCTGCTGCGGATTTTGCGGAGTGCGGATGATTCCAAG
gtagggagggagggaaggagagggggagggaggaagatgtgggacggcag
tttgccgtcgatggtcgtgaatatttccagagtgataatattcctggagg
atgaacattttcccaatttatattctcctcgcttacaccttccttcctcc
cttctttccttgtctccccccctcacacagGGCCTCGCTTCAGGAACCTC
TACCCTTGAGGAGGGAGGGAAAGAGGACGAGGAAGAAGAGGAGGAAGAGG
CAAGAGCGACGGCAGCAGTCCTAGATAAATTGATGGAGATTGCGATTCGT
TTCCCAGTGGCAGACACGATTGAGGAATATTTGAATGCTTGTGAAGAAAT
AGGAGCAGGAGGGGGAGGGAAGGAGGGAGAACGAGAAGAAGGGAGGGAAG
GAAGAGGGGTGGAAGGGAAGGAAGTGAAGAAGGGAAAGGATGGGAAGAGG
AAAGCGGAAAAAGGGAAAGGAGACAAGAAAAGCGCCCTTCCGACAAAACC
TTCGTCGACGACCTTGCCACCCACCACTGACGCCTCCTCCCTCCCTCCCT
CCTCCTTTCCACTCCCTGCGGTTTTACGGTTCGAGGCCGGCACATCTAAC
GAGCGTGTGGCGCTCGTGTTGGAGGAGCTTGAGAGAATGATGGAGCAGAC
ATCGTCCTCCCTCTCTTCCTCCTTTCCTCCCGCCCCATCCCTCCTAGCCT
CCCCCTCATTCCTCAGTGGAGGGGGAGGAGGAGGTGGTGGTGGCAGGGGG
AAAAGAAAAAGAGGAGGACGAAAGGAAGGGAAACGACGAAGATCTTCTGT
CATGTATGGTAAAGAATGGATGGAGGGATGGAGAACAAGCAACCACCACC
ACCACCACCACGCTGACATTTTGAACCGAACCTCTTTCCAACAAGAGCTC
GAGCTGCTCCTCCCCCCCCTCCTCCTCCACACCCTCCCTCCCTCTCTCCC
CCTCCCCCTGGCCGTGGCAGCCCTCCTTTTGACCTCCGCTCACGCTCCCT
CGCTGCTGCTGCATGCGCTCTTGTTCAATGAGCCGTCCTCCCTCCCTGCC
TTATTGCGGGGTATAACCTTGGCATTGAAGGTGGTGAAAGGGAGGGAGGG
AGGGAGGGAGGGAGGGGGGGAGGGCCAGGGAAAACGGGATATGGGGAGGA
GGAAATCTAAAGAGGAAGCGACGGAGGAAAAGAAGGAGGAGGAAAAGGAG
GAACAGGAGGAGGAGCGAGGAGGGGGGGGATTGTCGGAGCTGCTGCCCGG
GAGCAATGATGACGCTCCTACCTCCTTCCCTCCCTCGTCCTCCTCTCCCC
TTGAGACGAGGATTTTGACGCTGGTGCTACGCATGGCCGCCCTCCATCCT
TTCCTCGCCCGATCCCTCCTTTCTCACCTCTCCCTCCACGGCCTTCTCCC
TCAGGCCTGCGTCTACATCACACGCTTCCTCCTCCCCTCCTCCCTCCCCT
CCTCCCTCCCTCCCTCTCTTCCTCCTTTCCTCGAGGCCGAAAACGTGGCA
TTGGAATTATGTGGGCTGCTGCTGTCCTCGTCGAGCAGGAGGGAAGGAGG
GAGGGAGGGAGGGAGGGAGGGAGGGTGGATGGCTCGATGGCTCCAGCAGC
TTCCCAGGGAGGTTAGAACCCTGGAGAGGGAGGAAGGGGGGGAGGAAGCA
GAGGAGGGAGGGGGGGAGGAGAAATGGAAGGCTCGTCTTTCTCCGTCCAT
TGAAGAACTAGTTGTTTTGTTGTGGAAGGGGGAGGGCGGGAAGGAAATGC
TGCTGACGACTGCTGCCATCACTCCCTCTACTACATCTACTCCTATGGCT
GCTGTGGCTGTTCCACTTCCTCTTCGGATTAGGGCGACATTGACTCTCCT
TTCTGACGCCCACGCTTCTCTATCAGATACTGCCCTTCATCCCGCCTGGG
ATGGGATGGGAAGGGCCCTTGCCCTCCCTTCCTCCCTCCCTTCCTCCCTC
CTTCCCTCCCTCCCCTCTTCCTCGTATGCTCTGGCGCTGTTAGGCTCGCT
TCTACTGGTGGGATTCAGGAAGGGGGAGGGCGAAGGGGAGGGTGGGGTGG
AAGAAGCAGTGGCAAGGTTGAGCAAGGAGGGAGGGAGGGAGGGAGGGAGG
GAGGGAGGGAGGGCATTTGCCTTGTATGTAGAGTTATTGTTGGGCACAGG
GCAAGTGGATCGGGTCATGGTATTGTGTGAGGAGTGGGGGCTGGTGAGGG
AGGGAGGGAGGGGGGGAGGGAGGGAAGGAGGGAGGGGGGGAGGGGTAGCA
GGGATGAAGAACGATGGTAGGGATAGGGCTAGAGGTGCGGGGGAGGAGGG
GGAGGAAGAAGAAGAAGAAGAGGAGGAGGAGGAGGAGGAGGAGGAGGACA
AGGAGGATGGAGGGAGGAGAAATGCAGAGAGGAGGGAGGAGGAGGGGGAG
GAGGAAGAGGAGGAAGGGTGGCACCGTGCACCGCCTCCTCCCATCCCTCC
CTCCCTTCCTCCCTCCTCATCATCTTCCTCCTCCTCCTTACGTAAGGGCT
TAGAGGCCATCGCACGTGTCTTGATGAAGCGACGAAGGAAAGAGGAGGGA
AGGAGGGAAGGAGGGAAGGAGGGTGAGGGAGAGCGGCTTGCAAGAAATGT
GCTTGCGCTTCCTTTCTCTTTGTGTTACTCATCGGAAGGAGGAGGTGGAT
GGGAGGAAAGAGGAGGAAGAGGAGGAGGAGGAGAAGAAGGAGAAAGAAAG
GTACCCATCACCGCCTCGGCTTGCTTCCTCGAAGCCTGGAAACAAGGACT
CTTCCTCCCCCCCGCGTTCCCTCCCTCCCTCCTTCGCGACCGGATTCTCC
ACCTCCTTCGCCCTGCCCCTCCCTCCCTCCCTTCCTCCTTCCCTTCCTCA
TCCTCTCTCGACCCTTGGGCCCTCCCCCTCCTCCTCACCTATGCTGCTCC
CCCTACCCCTTCTCCTCCTCCACCTCCTTCTCCTCCTCCTTTTCACAGCA
GCACCACTCCCTCTTTCCCTCCCCCTCCCCACCCTCCTCCTCCTGCTTCT
CCAGCCTTGCTGCCTCGGGAGGTTCACGCTCTCATCCAACCTGCAGTCAA
AATCCTCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCT
CCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCCCCTCCTCCTCCCTCCCT
CCCTCGCCCTCTCTCTCCGCCTGGCGACCGCAGACCAGCACAGCCAAAGC
CTTATTCCTGAAAGGGCAAGTCGGGAGGGAGGAAGGGGCTGCCAGCAGTG
GCAGCAGCAGCAGTAGCAGCAGCAGTTATAGTTTCTTCCGTCCTCCTCGT
CGTCGTCGTCCTTTTCTTGTCGAGGGCGGGGAGGAGGGAGGGGAGGAGGA
AGAGGTGCGAGCATTCCGCGCCCTCCTCGCCTTATTGTATGCATTGGAGC
GGGTCCGGCATGAACAGCAGCACCAAGGGCCCTTCCCCCCTACCTTTCCC
CTCGACCTCACCGCCCTCCCCCTGTCAGGCCTCCTGTCCCTTGCCCGCGG
CTATGCCTGTTCACCCCCTTCCTCCTCCTCCTCCTCCTCCTCCTCGACGT
TGAACCGTGGCGTATGGTGTCAGCTGTTCTTTTGCCTCGTCGCCCGCAAT
CTTGATGTCAACCCTGAGCTCTACGATCCCTCCACCCTCTCCTCTCTCCC
TCCCTCCCCCTCGTCCTTCCCGTCCCCCTCTTCCACACCTCTCGACTCGG
AAGCCTCCCTTCTCGCCGACTTGAAAGGCGCTCTTTCCTCCCTCCCTCCC
TCCTTTTCCTCCCCCACCCCCTCCCTCATTCCCCTCCTTCACTCCCTCTC
CCTCCGATGGCGCCGTCTCTCCTCCTCCTCCTTCAACCCCTCCCTCCTCC
ACCTCCACATCCTCCCCCTCCTCCTCCCTCCCTCCCTCCCTCCCTCCCTC
AACCCCATCCTCCTCCTCCGCATCCTCCCTTGGATGTGGCACGCCCGCCC
TCCCTCCCTCCTTTCCCTCCTTCTCTCCCTCCTCGCCTCTTCCCTCCGAT
CCTCCCGCCTGGCCGTTGCGCAGGCCACGGCAGCATCCATGCATCGGGTG
GCTCTCCATGCCAAGGCCCTGTCCTCCCGCCCTTCCTCCTTCCCTCCCTC
CCTCCCTCCCACCGCCTCTTCCTACGCGTATCCGATGGGGGAGGGGGGGA
GGGGAGGAAGAGAGGGAGGGAGGGAAGGAAGGAGGGTGATGGCGGCAGCG
ACCGAGGCGGTGGTGAAGGGGAGAGGGGAGGAAGGGAAGCACTTCCTCCT
CCTGCAAGACACGATTGTATGCACTTGTCTCTTAAGTGCTGCGGCGACCC
TCTCCCTAGGCGAGGGCGAGGAAGGGATGGAGGAGGAGGTGGAGGAAAGG
GAGGAGGGAGGGAGGGAGGGAGGGAGGAGAAGCCTGCAAGGACGGGAGGA
GATCTGTCTATTTATCCAGCAGCTGCTGGTGCGCAATCCCGCCGTCCTTC
CCTTCCTCCTTCAACGCCAAGACCTCCCTCCCTCTGCCCTCCTCCTGCTC
GCAGACTGTATTCCTGCCTTCCTCCTCCTCTTTCTCTTTCCCTTCTCCTC
CCCTCCCTCCTCCTCATCCTCCTCCTCCCCCGCCTCCTCCCTCCCTCCCT
TCCTCCTGCATGGAACTTCCCTCCTCGCCAATGCCCGGGGCTTGGCCTTT
TTAACGGAATATTGCCGCCGTTACCCTCTGCAAACGGTTGCGTTTCAAGC
CGCGCACACCGCTATCACCACCCTCCTCAATAAACTCTTGCGTCCCACGG
TGCTCCAGgtacgtccacccctcccttgttcccttccttcctccctccct
ccctccctccctcccttgctccgcaatggccaacgaaccgatcgggaaat
atctcatccctctctttccctcctttctcaattcccttttcccccctccc
tttctccctccctcaactagGTGTGCGAGACCGAAGGTGAGGATGTGGGT
AGCGCGGTCGAGAGCATCTGCCAGTCGATCCTCACCCTGGCCCTCCTTCC
CTCCCGCCCTCCCGCCTTCCTTCCTTCCCTTCGAGATGCGGTGGCGAGGA
CGCTGCAGGATAAGGAGGTCATGGAGCTGAGAAGGGAGAAAGGGAGAGGC
AGCAGAGGGAGGGGGGGAGGTGGGAGGGAGGGAGGGAAGGAGGGAGGTGG
TGGGGGTGGTGGGGGTGGAGGGTTTGAAAGAGTCCCTGCATTGTTGGAAA
TGGTGTTGGCGAGGTTAAGAGCGGCAGCTGTGGGAGGGGGAGGGGGAGGA
GAAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGG
AGGAGGAGGAGGAAAGGAGGGAGGGAAAGAAAGAAGGGGAGGAGGACTTG
GCGTCACAGGGGGAGGTGGTGGTGGAGGAGGAAGAGGAAGAGAGGATAGA
GGGTAGGGGCAGGGAGGGGTTGGTTATGTAGAAGGGATTTAGAAAGGCAC
GTCACTGGCTGGAAGGAGGGAGACTTGGGAAAAAATGGCAGGGGTGCATG
GAGGATTAAATCGGAAAGAGAGGAAAAAAGAAGGGAAAGAGAGAGAGAAA
GAGAAAGAAAGGGAGGAATTCGTTGTACAGTTACTCAAGTGTAGTTAGAA
GAAAAAGTAACAAGATTTACTTAGTCCTGTCACGTTGAGTATCCCTCACA
GAGCCATTGTTTTCTCACGTCTTG back to topprotein sequence of NO28G00360.1 >NO28G00360.1-protein ID=NO28G00360.1-protein|Name=NO28G00360.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1788bp
MEITTNKPAQLQQQQQQVNQDEGTTTSTGSSGRVGRKRALSPSVASSSSR
LYHRMATRNLHPPPPSGQGRKEGGWVLEEEGLRPYLPSLLRILRSADDSK
GLASGTSTLEEGGKEDEEEEEEEARATAAVLDKLMEIAIRFPVADTIEEY
LNACEEIGAGGGGKEGEREEGREGRGVEGKEVKKGKDGKRKAEKGKGDKK
SALPTKPSSTTLPPTTDASSLPPSSFPLPAVLRFEAGTSNERVALVLEEL
ERMMEQTSSSLSSSFPPAPSLLASPSFLSGGGGGGGGGRGKRKRGGRKEG
KRRRSSVMYGKEWMEGWRTSNHHHHHHADILNRTSFQQELELLLPPLLLH
TLPPSLPLPLAVAALLLTSAHAPSLLLHALLFNEPSSLPALLRGITLALK
VVKGREGGREGGGEGQGKRDMGRRKSKEEATEEKKEEEKEEQEEERGGGG
LSELLPGSNDDAPTSFPPSSSSPLETRILTLVLRMAALHPFLARSLLSHL
SLHGLLPQACVYITRFLLPSSLPSSLPPSLPPFLEAENVALELCGLLLSS
SSRREGGREGGREGGWMARWLQQLPREVRTLEREEGGEEAEEGGGEEKWK
ARLSPSIEELVVLLWKGEGGKEMLLTTAAITPSTTSTPMAAVAVPLPLRI
RATLTLLSDAHASLSDTALHPAWDGMGRALALPSSLPSSLLPSLPSSSYA
LALLGSLLLVGFRKGEGEGEGGVEEAVARLSKEGGREGGREGGRAFALYV
ELLLGTGQVDRVMVLCEEWGLVREGGRGGGREGGRGGGVAGMKNDGRDRA
RGAGEEGEEEEEEEEEEEEEEEDKEDGGRRNAERREEEGEEEEEEGWHRA
PPPPIPPSLPPSSSSSSSSLRKGLEAIARVLMKRRRKEEGRREGGKEGEG
ERLARNVLALPFSLCYSSEGGGGWEERGGRGGGGEEGERKVPITASACFL
EAWKQGLFLPPAFPPSLLRDRILHLLRPAPPSLPSSFPSSSSLDPWALPL
LLTYAAPPTPSPPPPPSPPPFHSSTTPSFPPPPHPPPPASPALLPREVHA
LIQPAVKILSSSSSSSSSSSSSSSSSSSSSSSSSPSSSLPPSPSLSAWRP
QTSTAKALFLKGQVGREEGAASSGSSSSSSSSYSFFRPPRRRRPFLVEGG
EEGGEEEEVRAFRALLALLYALERVRHEQQHQGPFPPTFPLDLTALPLSG
LLSLARGYACSPPSSSSSSSSSTLNRGVWCQLFFCLVARNLDVNPELYDP
STLSSLPPSPSSFPSPSSTPLDSEASLLADLKGALSSLPPSFSSPTPSLI
PLLHSLSLRWRRLSSSSFNPSLLHLHILPLLLPPSLPPSLNPILLLRILP
WMWHARPPSLLSLLLSLLASSLRSSRLAVAQATAASMHRVALHAKALSSR
PSSFPPSLPPTASSYAYPMGEGGRGGREGGREGRRVMAAATEAVVKGRGE
EGKHFLLLQDTIVCTCLLSAAATLSLGEGEEGMEEEVEEREEGGREGGRR
SLQGREEICLFIQQLLVRNPAVLPFLLQRQDLPPSALLLLADCIPAFLLL
FLFPFSSPPSSSSSSSPASSLPPFLLHGTSLLANARGLAFLTEYCRRYPL
QTVAFQAAHTAITTLLNKLLRPTVLQVCETEGEDVGSAVESICQSILTLA
LLPSRPPAFLPSLRDAVARTLQDKEVMELRREKGRGSRGRGGGGREGGKE
GGGGGGGGGGFERVPALLEMVLARLRAAAVGGGGGGEGGGGGGGGGGGGG
GGGGGGGKEGGKERRGGGLGVTGGGGGGGGRGREDRG* back to top
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