NO28G00300, NO28G00300 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO28G00300 vs. NCBI_GenBank
Match: CEM16436.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 174.1 bits (440), Expect = 9.200e-40 Identity = 97/254 (38.19%), Postives = 139/254 (54.72%), Query Frame = 0 Query: 154 AIRRAQVEMAVEDHNGLLKLEGGGVFGEKPGHFI-VMPMTELFDPPLGSILHDKLQYSDKIMLPKSFIYEVLGRKLEPPWHFEITPLDDRYTSAPSPRQAAAL----------------------RAWRRERSIPCLHCSNFDFRAPEHYIFIPDWMMKALRLRPRDVVSMRFVRLPEGGLVSLQPHQAAFNKLSNVHAVLEQELKYYSCVTQGTTIRFKHNGKEYALDVVETLGPKDVKVPAIKVQDSDIRTD 385 A+ R++ E VED N L K EG + G F+ VMP++E F+PP G HD + Y DK+ P++ ++L R LE PW F + +D + A R + + ++CS DFRAPE+++F+PDWMM AL L PRD++ FVRLPEG V+ QPH +AF K+SN AVLE+EL++YS +T G+TI K+N + + +DVVE + + VQD D+ TD Sbjct: 91 ALERSREEQLVEDINILEKAEG------RHGRFLTVMPISEKFNPPPGHFSHDHVMYGDKVSFPRTISTQLLERNLEIPWQFVLEKIDRKELEKVWGGTATXXXXXXXXXXXXXXXXXXXXXIGGRQRYYKSGLKRVYCSTLDFRAPENFVFVPDWMMAALNLMPRDLLYCEFVRLPEGTTVTFQPHNSAFLKMSNHQAVLERELRHYSSLTAGSTIVIKYNRRNFLIDVVEVKSGSEA-YDGVCVQDCDVSTD 337
BLAST of NO28G00300 vs. NCBI_GenBank
Match: CBJ25981.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 167.9 bits (424), Expect = 6.600e-38 Identity = 91/239 (38.08%), Postives = 135/239 (56.49%), Query Frame = 0 Query: 154 AIRRAQVEMAVEDHNGLLKLEGGGVFGEKPGHFIVMPMTELFDPPLGSILHDKLQYSDKIMLPKSFIYEVLGRKLEPPWHFEIT------PLDDRYTSAPSPRQAAALRAWRRERSIPCLHCSNFDFRAPEHYIFIPDWMMKALRLRPRDVVSMRFVRLPEGGLVSLQPHQAAFNKLSNVHAVLEQELKYYSCVTQGTTIRFKHNGKEYALDVVETLGPKDVKVPAIKVQDSDIRTDIR 387 A+ AQ+E +ED N + K + +VMP+T+ FDP + H+ LQ DKI +P S + E++ ++ E PW FE+ P P+P + AAL + + CS D R+PE ++F+PDWMMKALRLRPRD+V R L + + LQPH +AF K+SN AV+E EL++YS +T+GTT+ F++ Y +V+E + A+ VQDSD+ TD + Sbjct: 57 AVALAQLEQEIEDLNVMHKFD-----RRLERLAMVMPLTDQFDPGVTHFAHEHLQEGDKISMPASILSELMRKQAEIPWQFELKLVRRKGPGKFEPVDVPAPPR-AALTGRAEMPQLSAVACSILDARSPEQFVFMPDWMMKALRLRPRDIVLYRHKDLTKASKIVLQPHSSAFLKMSNHQAVMETELRHYSAITRGTTVAFRYRKTLYKFNVLECIDADGKSQEAVCVQDSDVATDFQ 289
BLAST of NO28G00300 vs. NCBI_GenBank
Match: OEU19011.1 (hypothetical protein FRACYDRAFT_217419 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 162.2 bits (409), Expect = 3.600e-36 Identity = 94/241 (39.00%), Postives = 132/241 (54.77%), Query Frame = 0 Query: 151 HEEAIRRAQVEMAVEDHNG-LLKLEGGGVFGEKPGHFIVMPMTELFDPPLGSILHDKLQYSDKIMLPKSFIYEVLGRKLEPPWHFEITPLD-DRYTSAPSPRQA--AALRAWRRERSIPCLHCSNFDFRAPEHYIFIPDWMMKALRLRPRDVVSMRFV-RLPEGGLVSLQPHQAAFNK-LSNVHAVLEQELKYYSCVTQGTTIRFKHNGKEYALDVVE-TLGPKDVKVPAIKVQDSDIRTD 385 +E A A +E VEDHN + G I +P+ E FDPP+G H +Q DKI LP F + K E PW F+++ ++ D P+ R + + E +I L D RAP +Y F+P WMM+AL L+P D V ++ + +P G LV ++PH + F+K +SN AVLE EL++YS +T+G+TI F +NGK Y DV E PK K P +KVQD D+ TD Sbjct: 50 YESARELAAIEQQVEDHNARWVASSRDGAEATSKRRLICLPLDERFDPPMGMFSHGHIQTGDKISLPSCFKSTIELNKAEVPWLFKVSRVENDDDDDGPNTRVGIDVVSKGYAAEANIKELVAGPLDCRAPSNYCFMPWWMMRALGLKPLDQVDIQLITTVPPGSLVKIRPHSSDFSKDISNTQAVLETELRHYSSLTKGSTIAFDYNGKRYWFDVEELRSAPKGEKQPMVKVQDCDVATD 290
BLAST of NO28G00300 vs. NCBI_GenBank
Match: XP_002289664.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED93201.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 159.8 bits (403), Expect = 1.800e-35 Identity = 91/234 (38.89%), Postives = 128/234 (54.70%), Query Frame = 0 Query: 158 AQVEMAVEDHNG-LLKLEGGGVFGEKPGHFIVMPMTELFDPPLGSILHDKLQYSDKIMLPKSFIYEVLGRKLEPPWHFEITPLDDRYTSAPSPRQAAALRAWRRERSIPCLHCSNFDFRAPEHYIFIPDWMMKALRLRPRDVVSMRF-VRLPEGGLVSLQPHQAAFNKLSNVHAVLEQELKYYSCVTQGTTIRFKHNGKEYALDVVE-TLGPKDVKVPAIKVQDSDIRTD-IRP 388 A +E AVEDHN + GV IV+P+ + FDPP+G H + DK+ LP++F + K E PW FE++ +D +AP A ++ DFR+P++Y F+P WM KAL LRPRDVV ++ P G V L+PH ++F + N AVLE ELK+YS +T G+TI F + G+ Y DVV+ P+ +VP KVQD DI + +RP Sbjct: 77 ALLEQAVEDHNAEYVATSASGVDAISYRRVIVLPLDDRFDPPVGVFSHGHIYTGDKMSLPRNFWDAITSSKAEVPWLFEVSRVDG--VTAPRVELPADEHHHATSATLSRAVGGALDFRSPDNYAFLPPWMFKALGLRPRDVVDIKLTTTTPPGSAVRLRPHTSSFVNIGNHQAVLETELKHYSALTLGSTIPFDYRGERYYFDVVDLRSAPRGERVPMAKVQDCDIAAEFVRP 308
BLAST of NO28G00300 vs. NCBI_GenBank
Match: BAT25222.1 (symbiotic ubiquitin fusion degradation [Nitzschia sp. IriIs04]) HSP 1 Score: 155.2 bits (391), Expect = 4.400e-34 Identity = 89/248 (35.89%), Postives = 133/248 (53.63%), Query Frame = 0 Query: 152 EEAIRRAQVEMAVEDHNGLLKLEGGGVF-GEKPGHFIVMPMTELFDPPLGSILHDKLQYSDKIMLPKSFIYEVLGRKLEPPWHFEITPL-------DDRYTSAPSPRQAAALRAWRRERSIPCLHCSNFDFRAPEHYIFIPDWMMKALRLRPRDVVSMRFV-RLPEGGLVSLQPHQAAFNK-LSNVHAVLEQELKYYSCVTQGTTIRFKHNGKEYALDVVE-TLGPKDVKVPAIKVQDSDIRTDIRPS 389 E+A + A +E +EDHN + I +P+ + FDPP+G H +Q DK+ LP+ F + K E PW F + + D+ S+ + R +A + I DFRAP +Y+F+P WMM+AL L+PRDVV + +P G L L+PH ++++K +SN AVLE EL++YS +T+G+TI F +N K Y DV + P+ + AI+VQD DI TD P+ Sbjct: 54 EQAQKLAALEQEIEDHNAAWVASSSDMAESTSKRRLICLPLDDRFDPPMGVFSHGHVQTGDKMSLPRVFFQAIQANKAEVPWLFTVRRVEKSTGEGDEEVVSSYNERVVGPEQAGSLSQVIG----GPLDFRAPPNYVFLPHWMMRALGLQPRDVVDVEITFSVPAGSLARLRPHSSSWSKEISNPQAVLETELRHYSSLTKGSTIAFDYNSKRYWFDVEDLRSAPRGERCSAIRVQDCDIATDFLPA 297
BLAST of NO28G00300 vs. NCBI_GenBank
Match: XP_002184020.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC44689.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 150.6 bits (379), Expect = 1.100e-32 Identity = 86/237 (36.29%), Postives = 127/237 (53.59%), Query Frame = 0 Query: 152 EEAIRRAQVEMAVEDHNG-LLKLEGGGVFGEKPGHFIVMPMTELFDPPLGSILHDKLQYSDKIMLPKSFIYEVLGRKLEPPWHFEITPLDDRYTSAPSPRQAAALRAWRRERSIPCLHCSNFDFRAPEHYIFIPDWMMKALRLRPRDVVSMR-FVRLPEGGLVSLQPHQAAFNK-LSNVHAVLEQELKYYSCVTQGTTIRFKHNGKEYALDVVE-TLGPKDVKVPAIKVQDSDIRTD 385 ++A +++E VED+N + G + I +P+++ FDPP+GS H +Q DK+ LP +F + E PW F + +D + + + + DFRAP YIF+P WMM+AL ++PRD+V + F +P G L L+PH + F K ++N AVLE EL++YS +TQG+TI F +N K Y DVVE P+ K +KVQD DI TD Sbjct: 61 QKANELSELEQQVEDYNAEWIATSNGQAQSTRHRRLICLPLSDRFDPPMGSFSHKHVQTGDKMSLPANFWQAIQLNHAEVPWLFSVKRIDGVTGERVEFSDDDIITPHKPLAQLDKVVGGPLDFRAPACYIFLPWWMMRALGVKPRDIVEVELFETVPAGSLAKLRPHSSDFGKEIANPQAVLETELRHYSSLTQGSTIAFDYNKKRYWFDVVELRSAPRGEKSSMVKVQDCDIATD 297
BLAST of NO28G00300 vs. NCBI_GenBank
Match: SBT56430.1 (ubiquitin fusion degradation protein 1, putative (UFD1) [Plasmodium ovale wallikeri]) HSP 1 Score: 147.1 bits (370), Expect = 1.200e-31 Identity = 81/237 (34.18%), Postives = 132/237 (55.70%), Query Frame = 0 Query: 153 EAIRRAQVEMAVEDHNGLLKLEGGGVFGEKPGHFIVMPMTELFDPPLGSILHDKLQYSDKIMLPKSFIYEV-LGRKLEPPWHFEITPLDDR----YTSAPSPRQAAALRAWRRERSIPCLHCSNFDFRAPEHYIFIPDWMMKALRLRPRDVVSMRFVRLPEGGLVSLQPHQAAFNKLSNVHAVLEQELKYYSCVTQGTTIRFKHNGKEYALDVVETLGPKDVKVPAIKVQDSDIRTD 385 +AI + ++ V D N L G F + I MP++E F+P +G+ HD +QYSDK LP FIY++ L +E PW+F + +D + Y P + + + ++ + + DF+A +++IF+P W+MK+L+L+ D+V ++FV+L V LQPH F L+ +LE++L+YYSC+T+ +TIR +HN +Y DVV K V +QD+D+ D Sbjct: 48 KAIYKTKLLTYVNDINNLNLGNGKNEF-----YLIAMPLSEKFNPFVGTFCHDNIQYSDKASLP-IFIYDILLNTHIEVPWNFVLEKVDIKMGPIYQKISMP-EVNRFCEYEKVNALDRVFINVLDFKAKKNFIFLPTWVMKSLQLKCFDIVRLKFVKLDTATSVVLQPHHKKFFNLTEPKKILEEKLRYYSCITKNSTIRIRHNNVDYHFDVVRIDSEKKKNVEVASIQDTDVIFD 277
BLAST of NO28G00300 vs. NCBI_GenBank
Match: SBT33870.1 (ubiquitin fusion degradation protein 1, putative (UFD1) [Plasmodium ovale wallikeri]) HSP 1 Score: 147.1 bits (370), Expect = 1.200e-31 Identity = 81/237 (34.18%), Postives = 132/237 (55.70%), Query Frame = 0 Query: 153 EAIRRAQVEMAVEDHNGLLKLEGGGVFGEKPGHFIVMPMTELFDPPLGSILHDKLQYSDKIMLPKSFIYEV-LGRKLEPPWHFEITPLDDR----YTSAPSPRQAAALRAWRRERSIPCLHCSNFDFRAPEHYIFIPDWMMKALRLRPRDVVSMRFVRLPEGGLVSLQPHQAAFNKLSNVHAVLEQELKYYSCVTQGTTIRFKHNGKEYALDVVETLGPKDVKVPAIKVQDSDIRTD 385 +AI + ++ V D N L G F + I MP++E F+P +G+ HD +QYSDK LP FIY++ L +E PW+F + +D + Y P + + + ++ + + DF+A +++IF+P W+MK+L+L+ D+V ++FV+L V LQPH F L+ +LE++L+YYSC+T+ +TIR +HN +Y DVV K V +QD+D+ D Sbjct: 58 KAIYKTKLLTYVNDINNLNLGNGKNEF-----YLIAMPLSEKFNPFVGTFCHDNIQYSDKASLP-IFIYDILLNTHIEVPWNFVLEKVDIKMGPIYQKISMP-EVNRFCEYEKVNALDRVFINVLDFKAKKNFIFLPTWVMKSLQLKCFDIVRLKFVKLDTATSVVLQPHHKKFFNLTEPKKILEEKLRYYSCITKNSTIRIRHNNVDYHFDVVRIDSEKKKNVEVASIQDTDVIFD 287
BLAST of NO28G00300 vs. NCBI_GenBank
Match: GAX21155.1 (hypothetical protein FisN_23Hh170 [Fistulifera solaris]) HSP 1 Score: 139.4 bits (350), Expect = 2.500e-29 Identity = 83/244 (34.02%), Postives = 131/244 (53.69%), Query Frame = 0 Query: 152 EEAIRRAQVEMAVEDHNG-LLKLEGGGVFGEKPGHFIVMPMTELFDPPLGSILHDKLQYSDKIMLPKSFIYEVLGRKLEPPWHFEITPLDDRYTSAPSPRQ---AAALRAWRRERSIPCLHCSNFDFRAPEHYIFIPDWMMKALRLRPRDVVSMRFVR-LPEGGLVSLQPHQAAFNK-LSNVHAVLEQELKYYSCVTQGTTIRFKHNGKEYALDVVE-TLGPKDVKVPAIKVQDSDIRTDIRPS 389 ++A A +E +V D+N + + + +P+ + FDP +G H +Q DK+ LP +F + + PW + ++ ++ TSA P + A+ ++ +++ + DFRAP +Y+F+P WM +AL LRP D+V + ++ + G L L+PH +F K + N AVLE EL++YS +TQG+TI F K Y DVVE P+ K P +KVQD DI TD PS Sbjct: 42 QKAQDMANLEQSVSDYNAHWIATSENQAQAVRHRRLLALPLDDRFDPAMGIFSHGHVQTGDKMSLPSNFWPAIALNDADVPWLYSVSRIEG-VTSARVPYKDYGEDAITPYQPLKALDKVVGGPLDFRAPTNYVFLPLWMFRALGLRPFDIVQVDLIQTVAPGSLARLRPHSKSFTKEIPNPQAVLETELRHYSALTQGSTIAFDFLKKRYWFDVVELRAAPRGEKQPMVKVQDCDIATDFLPS 284
BLAST of NO28G00300 vs. NCBI_GenBank
Match: SOV76314.1 (ubiquitin fusion degradation protein 1 [Plasmodium sp. gorilla clade G3]) HSP 1 Score: 138.7 bits (348), Expect = 4.300e-29 Identity = 71/205 (34.63%), Postives = 116/205 (56.59%), Query Frame = 0 Query: 185 HFIVMPMTELFDPPLGSILHDKLQYSDKIMLPKSFIYEV-LGRKLEPPWHFEITPLD----DRYTSAPSPRQAAALRAWRRERSIPCLHCSNFDFRAPEHYIFIPDWMMKALRLRPRDVVSMRFVRLPEGGLVSLQPHQAAFNKLSNVHAVLEQELKYYSCVTQGTTIRFKHNGKEYALDVVETLGPKDVKVPAIKVQDSDIRTD 385 + I +P+ E F+P +G+ H+ +QYSDK LP FIY++ L + +E PW+F I ++ + Y + P ++ ++ + + DF+A +++IF+P W+MK+L L DV+ +RFV+L V LQPHQ F L N +LE++L+YYSC+T+ +TI KH+ Y DV+ K +QD+D+ D Sbjct: 86 YLITLPLCEKFNPFVGTFCHNNIQYSDKASLP-IFIYDILLNKHIEVPWNFVIEKVNVKTSENYKNVCMP-NITLFNNYKNINNLNRVFINVLDFKAKKNFIFLPTWIMKSLNLNCFDVIRLRFVKLETASSVVLQPHQKKFFDLENPKKILEEKLRYYSCITRNSTISIKHDNVVYYFDVIRIDSEKKKDTEVASIQDADVIFD 288 The following BLAST results are available for this feature:
BLAST of NO28G00300 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO28G00300 ID=NO28G00300|Name=NO28G00300|organism=Nannochloropsis oceanica|type=gene|length=3490bpback to top protein sequence of NO28G00300.1 >NO28G00300.1-protein ID=NO28G00300.1-protein|Name=NO28G00300.1|organism=Nannochloropsis oceanica|type=polypeptide|length=420bpback to top protein sequence of NO28G00300.2 >NO28G00300.2-protein ID=NO28G00300.2-protein|Name=NO28G00300.2|organism=Nannochloropsis oceanica|type=polypeptide|length=377bpback to top Synonyms
Publications
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