NO28G00050, NO28G00050 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO28G00050 vs. NCBI_GenBank
Match: EWM20908.1 (Acyl transferase/acyl hydrolase/lysophospholipase [Nannochloropsis gaditana]) HSP 1 Score: 168.7 bits (426), Expect = 3.100e-38 Identity = 89/177 (50.28%), Postives = 116/177 (65.54%), Query Frame = 0 Query: 151 ISFPGGGIFFYWQAGAVHYLQQHFNLREANLVGASAGALTAVLTGCDVCMPLAAERALSLSMSIALWARPLGLVGVWGALVGEWLRELLPEDAAEQCKGRVQLYVNVLELKAMLQKTSNCLPLRRTRVSDFESRHELVETCLASVHIPFFMDGKPLKRLDRHGLVLDGSFRLTKREL 328 ++FPGGG FFYWQ+G +L QHF+LR A LVGASAG+LTA L C V A E A+ + ++ R +GLVGVWGA+V +WL E+LP++AAE C GRV +++VL CLP RR V+DF S+ +L+ETCLAS H+P MDGKP RL R +DGS +R+L Sbjct: 243 VNFPGGGKFFYWQSGVATFLNQHFDLRSAKLVGASAGSLTATLMACHVDAHHATETAVRILHRYKVYERAMGLVGVWGAVVRDWLWEVLPDNAAELCAGRV--HISVL-----------CLPYRRCHVTDFASKEDLIETCLASAHLPLVMDGKPF-RLWRGWPCMDGSILAGRRDL 405
BLAST of NO28G00050 vs. NCBI_GenBank
Match: PRW58356.1 (serine carboxypeptidase-like 21 [Chlorella sorokiniana]) HSP 1 Score: 147.9 bits (372), Expect = 5.700e-32 Identity = 77/171 (45.03%), Postives = 103/171 (60.23%), Query Frame = 0 Query: 149 PTISFPGGGIFFYWQAGAVHYLQQHFNLREANLVGASAGALTAVLTGCDVCMPLAAERALSLSMSIALWARPLGLVGVWGALVGEWLRELLPEDAAEQCKGRVQLYVNVLELKAMLQKTSNCLPLRRTRVSDFESRHELVETCLASVHIPFFMDGKPLKRLDRHGLVLDGS 320 P +SF GGGIFF+W+ G + YL ++F+LR +VGASAG L L C V A A L+ ++ RP GL G+WGAL+ EWL ELLPEDAAE+C+GRV+L V + LR + DFES+ +L++ C+ +VHIPFF+DG R R +DGS Sbjct: 411 PILSFAGGGIFFWWELGVLRYLHRNFDLRGVQMVGASAGGLICALAACGVDEDKAVRVAHRLAQEYGVFERPGGLAGIWGALIREWLDELLPEDAAERCRGRVRLVVTEVP------------SLRLRYLEDFESKEDLIDACMTTVHIPFFLDGN-ASRTYRGQPYIDGS 568
BLAST of NO28G00050 vs. NCBI_GenBank
Match: XP_005825501.1 (hypothetical protein GUITHDRAFT_144126 [Guillardia theta CCMP2712] >EKX38521.1 hypothetical protein GUITHDRAFT_144126 [Guillardia theta CCMP2712]) HSP 1 Score: 144.4 bits (363), Expect = 6.300e-31 Identity = 76/178 (42.70%), Postives = 109/178 (61.24%), Query Frame = 0 Query: 149 PTISFPGGGIFFYWQAGAVHYLQQHFNLREANLVGASAGALTAVLTGCDVCMPLAAERALSLSMSIALWARPLGLVGVWGALVGEWLRELLPEDAAEQCKGRVQLY-VNVLELKAMLQKTSNCLPLRRTRVSDFESRHELVETCLASVHIPFFMDGKPLKRLDRHGLVLDGSFRLTKR 326 P I FPGGGI+F+WQAG V LQ+ N+ + GASAG+L+AV C V M A A L+ +W R GL G+WG ++ +WL ELLPE+AAE C RV + V+V ++ + LPL+R ++ F+++ +L+E C+ASVH+P F+DGK + LD + +DGS R Sbjct: 17 PLIVFPGGGIYFWWQAGVVQGLQKRINVDSFDFTGASAGSLSAVFAACGVDMMQAFHLAQKLAEEKNVWTRKEGLAGIWGDMIYQWLDELLPENAAEICTDRVDMVAVSVTSVRL------SFLPLKRKSITRFKTKKDLIEACMASVHVPMFLDGKMSRSLD-GDICVDGSITFVLR 187
BLAST of NO28G00050 vs. NCBI_GenBank
Match: XP_001702678.1 (predicted protein [Chlamydomonas reinhardtii] >PNW77319.1 hypothetical protein CHLRE_10g431350v5 [Chlamydomonas reinhardtii]) HSP 1 Score: 142.9 bits (359), Expect = 1.800e-30 Identity = 71/173 (41.04%), Postives = 105/173 (60.69%), Query Frame = 0 Query: 148 APTISFPGGGIFFYWQAGAVHYLQQHFNLREANLVGASAGALTAVLTGCDVCMPLAAERALSLSMSIALWARPLGLVGVWGALVGEWLRELLPEDAAEQCKGRVQLYVNVLELKAMLQKTSNCLPLRRTRVSDFESRHELVETCLASVHIPFFMDGKPLKRLDRHGLVLDGSF 321 A T+S+ G GIFF+WQ GA+ +L + ++L + GAS GAL AVL C + + +RA LS+ +W RPLGLVGVWG+L+ +WL +LLP+DAAE+C+G++ + V L + + +SDF+ + +L+ +AS HIP +D K RL R +DGSF Sbjct: 84 ATTLSWAGAGIFFFWQLGALKFLAERYDLTRVPMAGASGGALAAVLACCGIPADVVLQRAYDLSVQHGIWERPLGLVGVWGSLIEQWLDDLLPDDAAERCRGKITIIVTTLP------------NMGQVGISDFKDKKDLINCAMASAHIPMLLDLK-FARLCRGKFCVDGSF 243
BLAST of NO28G00050 vs. NCBI_GenBank
Match: KXZ48604.1 (hypothetical protein GPECTOR_26g507 [Gonium pectorale]) HSP 1 Score: 142.9 bits (359), Expect = 1.800e-30 Identity = 73/171 (42.69%), Postives = 102/171 (59.65%), Query Frame = 0 Query: 150 TISFPGGGIFFYWQAGAVHYLQQHFNLREANLVGASAGALTAVLTGCDVCMPLAAERALSLSMSIALWARPLGLVGVWGALVGEWLRELLPEDAAEQCKGRVQLYVNVLELKAMLQKTSNCLPLRRTRVSDFESRHELVETCLASVHIPFFMDGKPLKRLDRHGLVLDGSF 321 T+S+ G GIFF+WQ GA+ YL + ++L + GAS GAL AVL C V L +RA LS+ +W RPLGLVG+WG L+ +WL +LLP DAAE+C+G+V + V L + + +SDF+ + +L+ +AS HIP +D K RL R +DGSF Sbjct: 9 TLSWAGAGIFFFWQLGALKYLAERYDLTRVPMAGASGGALAAVLAACGVPADLVLQRAYDLSVKHGIWERPLGLVGIWGTLIEQWLDDLLPIDAAERCRGKVTVVVTTLP------------NMGQVGISDFKDKEDLINCAMASSHIPMLLDLK-FSRLCRGKYCVDGSF 166
BLAST of NO28G00050 vs. NCBI_GenBank
Match: PNH11898.1 (Patatin-like phospholipase domain-containing protein 1 [Tetrabaena socialis]) HSP 1 Score: 142.5 bits (358), Expect = 2.400e-30 Identity = 72/173 (41.62%), Postives = 104/173 (60.12%), Query Frame = 0 Query: 148 APTISFPGGGIFFYWQAGAVHYLQQHFNLREANLVGASAGALTAVLTGCDVCMPLAAERALSLSMSIALWARPLGLVGVWGALVGEWLRELLPEDAAEQCKGRVQLYVNVLELKAMLQKTSNCLPLRRTRVSDFESRHELVETCLASVHIPFFMDGKPLKRLDRHGLVLDGSF 321 A T+S+ G GIFF+WQ GA+ +L + ++L + GAS GAL +VL C V +RA LS+ +W RPLGLVGVWG+L+ +WL +LLP+DAAE+C+G++ + V L A + +SDF+ + +L+ +AS HIP +D K RL R +DGSF Sbjct: 84 ATTLSWAGAGIFFFWQLGAMKFLSERYDLTRVPMAGASGGALASVLAACGVPADEVLQRAYDLSVKYGIWERPLGLVGVWGSLIEQWLDDLLPDDAAERCRGKITIIVTTLPNMA------------QVGISDFKDKKDLITAAMASSHIPMLLDLK-FARLCRGKYCVDGSF 243
BLAST of NO28G00050 vs. NCBI_GenBank
Match: GAX80652.1 (hypothetical protein CEUSTIGMA_g8087.t1 [Chlamydomonas eustigma]) HSP 1 Score: 142.1 bits (357), Expect = 3.100e-30 Identity = 70/172 (40.70%), Postives = 102/172 (59.30%), Query Frame = 0 Query: 149 PTISFPGGGIFFYWQAGAVHYLQQHFNLREANLVGASAGALTAVLTGCDVCMPLAAERALSLSMSIALWARPLGLVGVWGALVGEWLRELLPEDAAEQCKGRVQLYVNVLELKAMLQKTSNCLPLRRTRVSDFESRHELVETCLASVHIPFFMDGKPLKRLDRHGLVLDGSF 321 P+ S+ G G++F+WQ GA+ YL + +L + ++ GAS G+L AVL C V L +RA LS+ +W RP+GL G+WG LV +WL ELLPE+A E C GRV + V L +R+ +SDF+ + +L+ C+AS H+P +D K + R R +DGSF Sbjct: 77 PSFSWAGSGLYFFWQLGAMKYLAEQCDLSKVHMTGASGGSLVAVLAACGVSADLILKRAYELSLEFNIWDRPMGLTGIWGGLVEQWLDELLPENAHEMCGGRVTVVVTTLP------------DMRQVGISDFKDKQDLINACMASCHVPLVLDLK-VTRYCRGSECVDGSF 235
BLAST of NO28G00050 vs. NCBI_GenBank
Match: CBJ30266.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 141.4 bits (355), Expect = 5.300e-30 Identity = 78/185 (42.16%), Postives = 103/185 (55.68%), Query Frame = 0 Query: 149 PTISFPGGGIFFYWQAGAVHYLQQHFNLREANLVGASAGALTAVLTGCDVCMPLAAERALSLSMSIALWARPLGLVGVWGALVGEWLRELLPEDAAEQCKGRVQLYVNVLELKAMLQKTSNCLPLRRTRVSDFESRHELVETCLASVHIPFFMDGKPLKRLDRHGLVLDGSFRLTKRELCEGGGR 334 P +SFPGGGIFF+WQAG + LQ+ +NL + VGASA L + +W RPLGL GVWGA+V +WL ELLP+DA C+ RV L V + + P RR VS+F S+ +L++ C+ASVHIP+FMD K R G +DGSFR ++ +L G R Sbjct: 102 PVLSFPGGGIFFWWQAGVISALQERYNLSSLDFVGASAXXXXXXXXXXXXXXXXXXXXXXXLCDTNEIWTRPLGLAGVWGAMVEDWLDELLPDDADVICQDRVHLLVIGIWPR----------PFRRRAVSNFTSKSDLIKACMASVHIPWFMD-KHFSARHRGGRFVDGSFRASREDLSLGDDR 275
BLAST of NO28G00050 vs. NCBI_GenBank
Match: XP_002950157.1 (hypothetical protein VOLCADRAFT_104567 [Volvox carteri f. nagariensis] >EFJ48825.1 hypothetical protein VOLCADRAFT_104567 [Volvox carteri f. nagariensis]) HSP 1 Score: 140.6 bits (353), Expect = 9.100e-30 Identity = 71/173 (41.04%), Postives = 101/173 (58.38%), Query Frame = 0 Query: 148 APTISFPGGGIFFYWQAGAVHYLQQHFNLREANLVGASAGALTAVLTGCDVCMPLAAERALSLSMSIALWARPLGLVGVWGALVGEWLRELLPEDAAEQCKGRVQLYVNVLELKAMLQKTSNCLPLRRTRVSDFESRHELVETCLASVHIPFFMDGKPLKRLDRHGLVLDGSF 321 A T+S+ G GI+F+WQ GA+ YL + ++L + GAS GAL AVL C + +RA LS+ +W RPLGLVGVWG+L+ +WL +LLP DAAE+C+G+ + V L A + ++DF + +L+ +AS HIP +D K RL R +DGSF Sbjct: 80 AKTLSWAGAGIYFFWQLGAMKYLAERYDLTRVPMAGASGGALAAVLAACGIPADTVLQRAYDLSVKHGIWERPLGLVGVWGSLIEQWLDDLLPADAAERCRGKTTIIVTTLPNMA------------QVGITDFTDKRDLINAAMASAHIPMLLDLK-FARLCRGKYCVDGSF 239
BLAST of NO28G00050 vs. NCBI_GenBank
Match: GAQ86777.1 (hypothetical protein KFL_003100140 [Klebsormidium nitens]) HSP 1 Score: 140.6 bits (353), Expect = 9.100e-30 Identity = 74/155 (47.74%), Postives = 99/155 (63.87%), Query Frame = 0 Query: 149 PTISFPGGGIFFYWQAGAVHYLQQHFNLREANLVGASAGALTAVLTGCDVCMPLAAERALSLSMSIALWARPLGLVGVWGALVGEWLRELLPEDAAEQCKGRVQLYVNVLELKAMLQKTSNCLPLRRTRVSDFESRHELVETCLASVHIPFFMDG 304 P I FPGGG+FFYW G V+ LQ ++ A++ GASAGAL +VL C V M AAE A LS+ LW R L L VWG L+ +WL +LLP++AAE C GR+ L+ VLEL + L +R V+DF+ + +L++ LASVHIP F++G Sbjct: 124 PIICFPGGGMFFYWMIGVVNILQDEIDMTTAHMSGASAGALASVLAACGVDMRRAAEHAFQLSIDEKLWDRKLKLALVWGRLIRQWLWDLLPDNAAELCNGRIHLF--VLELPGL----RTGLHCKRVPVTDFKDKADLIDCALASVHIPIFING 272 The following BLAST results are available for this feature:
BLAST of NO28G00050 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO28G00050 ID=NO28G00050|Name=NO28G00050|organism=Nannochloropsis oceanica|type=gene|length=2287bpback to top protein sequence of NO28G00050.1 >NO28G00050.1-protein ID=NO28G00050.1-protein|Name=NO28G00050.1|organism=Nannochloropsis oceanica|type=polypeptide|length=340bpback to top Synonyms
Publications
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