NO28G00030, NO28G00030 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO28G00030 vs. NCBI_GenBank
Match: CBJ30589.1 (HECT E3 ubiquitin ligase, putative [Ectocarpus siliculosus]) HSP 1 Score: 453.4 bits (1165), Expect = 1.900e-123 Identity = 224/400 (56.00%), Postives = 290/400 (72.50%), Query Frame = 0 Query: 642 VAALPFRQKHLWFVEQLAQRVQQPWSQG--HIRLDVARSKLLEGSFGQIMSLHPGVMRRWMRVQFINEPGVDAGGLEREWFVLVSQALMDPALGLFVQQ--HGAYSINPCAMAAVGDRDLALQYYYFAGRVFGKALLEHQTLPVALSLPLLKHLLGTPITFSDLEMVDPDLYRSLCWVRDCRSMEALAALHLDFTVASETLGKRTVHELKPGGKDIALTLENKKEYLALMLRHRLLDGVKRQIWQLLRGVYEVVPKDLLSVFDYQELQLLMSGLPIIDVQDWKRHTEYLGVYQRQGEQHKIIRWFWEVVEDRLDEESRARLLQFTTGGCNVPAQGFKALQSNDGNFRRFNIQSVRREECIFPRAHTCFNKLDLPVYETKEELEGYLTLVINMEITGFTID 1038 VA+ PF QKH WF++QL + +Q P G +R++V R LLE SF Q+ +++ G +RRW+RVQF+ EPGVDAGGLEREWF+LV AL DP+ GLF Q +GA++INP + A ++ L+Y+ F GRV GK L+EH P LSLP+LKH+LG P+ FSDLE D +LYR+L W+R E+L LDFTV E+ G + V EL PGGKD+ +T NK+EYL L L+HR+LDG Q+W L+RG+Y+V+P L+SVFDYQEL+LL+ G+P IDV +WKR + YLG Y+R GE H +I+WFWEVVE E+ +ARLLQF TG +PA GFKALQSNDG+FR F++QS+ + + FPRAHTCFNKLDLP YE+K+ELE L L I E+TGFTID Sbjct: 796 VASKPFWQKHSWFLDQL-KLLQVPHGGGMEAMRIEVNRKNLLEDSFAQVSAMNAGELRRWLRVQFVGEPGVDAGGLEREWFMLVCSALFDPSTGLFTPQLGNGAFAINPSSGVA---NEMHLEYFRFTGRVLGKLLMEHSVAPYHLSLPILKHMLGLPVAFSDLEFADAELYRNLQWLRANPGAESLG---LDFTVTLESFGVKEVAELLPGGKDMTVTDANKEEYLRLRLKHRVLDGTHSQLWHLMRGMYDVIPSHLISVFDYQELELLLCGIPEIDVSEWKRCSRYLGDYRRAGENHVVIKWFWEVVE-AFSEDEKARLLQFCTGSSRLPAHGFKALQSNDGSFRAFSLQSITKRDSAFPRAHTCFNKLDLPTYESKKELEECLGLCICFELTGFTID 1187
BLAST of NO28G00030 vs. NCBI_GenBank
Match: XP_009041254.1 (hypothetical protein AURANDRAFT_55365 [Aureococcus anophagefferens] >EGB03976.1 hypothetical protein AURANDRAFT_55365 [Aureococcus anophagefferens]) HSP 1 Score: 394.4 bits (1012), Expect = 1.100e-105 Identity = 197/403 (48.88%), Postives = 265/403 (65.76%), Query Frame = 0 Query: 638 DLDAVAALPFRQKHLWFVEQLAQRVQQPWSQGHIRLDVARSKLLEGSFGQIMSLHPGVMRRWMRVQFINEPGVDAGGLEREWFVLVSQALMDPALGLFVQ---QHGAYSINPCAMAAVGDRDLALQYYYFAGRVFGKALLEHQTLPVALSLPLLKHLLGTPITFSDLEMVDPDLYRSLCWVRDCRSMEALAALHLDFTVASETLGKRTVHELKPGGKDIALTLENKKEYLALMLRHRLLDGVKRQIWQLLRGVYEVVPKDLLSVFDYQELQLLMSGLPIIDVQDWKRHTEYLGVYQRQGEQHKIIRWFWEVVEDRLDEESRARLLQFTTGGCNVPAQGFKALQSNDGNFRRFNIQSVRREECIFPRAHTCFNKLDLPVYETKEELEGYLTLVINMEITGFTID 1038 +L AA+PF+ K WF +Q+A ++Q PW GHI+++V R LLE S S+ MR+ R +FI EPGVDAGG+ REWF LVS L +P L+ INP + A D L+Y++F GR+ GKAL + Q + L PL KH+LG P+T +DLE +D D Y +LC ++D +E LDFTV + G +LKP G + +T N EY+ L +R+RLLD VK Q+ LL G Y+VVP+ LLSVFD+QEL+LL+ GLP ID++DWKR+TEY G Y+R+G HK+++WFWEVV D DEE +ARLLQF TG VPAQGF+ALQ ND N R+F I S+ +FP+AHTCFN++DLP+Y++K++L+ +LT+ I ME TGF ID Sbjct: 123 ELSRYAAMPFQHKEAWFRQQIA-KLQVPWEDGHIKINVRRENLLEDSMEATESITQADMRKIFRFEFIAEPGVDAGGVAREWFQLVSDMLFNPDFALWSYSSINQMCMQINPSSGIA---NDEHLRYFHFTGRLLGKALFDRQIVAGHLVRPLYKHILGWPLTVADLEQLDADTYANLCKLKDLDDVEVCC---LDFTVTEDHWGTAQTVDLKPDGANCTVTNNNVDEYIQLQMRYRLLDRVKEQVKALLIGFYDVVPEALLSVFDFQELELLLCGLPEIDIEDWKRNTEYTGDYERKGASHKVVKWFWEVVVDDFDEEHKARLLQFVTGTSGVPAQGFRALQGNDNNIRKFTINSIPETVSVFPKAHTCFNRIDLPLYDSKKKLKKFLTMAIQMEATGFDID 518
BLAST of NO28G00030 vs. NCBI_GenBank
Match: XP_009039867.1 (hypothetical protein AURANDRAFT_38473 [Aureococcus anophagefferens] >EGB05485.1 hypothetical protein AURANDRAFT_38473 [Aureococcus anophagefferens]) HSP 1 Score: 391.7 bits (1005), Expect = 6.900e-105 Identity = 196/403 (48.64%), Postives = 264/403 (65.51%), Query Frame = 0 Query: 638 DLDAVAALPFRQKHLWFVEQLAQRVQQPWSQGHIRLDVARSKLLEGSFGQIMSLHPGVMRRWMRVQFINEPGVDAGGLEREWFVLVSQALMDPALGLFVQ---QHGAYSINPCAMAAVGDRDLALQYYYFAGRVFGKALLEHQTLPVALSLPLLKHLLGTPITFSDLEMVDPDLYRSLCWVRDCRSMEALAALHLDFTVASETLGKRTVHELKPGGKDIALTLENKKEYLALMLRHRLLDGVKRQIWQLLRGVYEVVPKDLLSVFDYQELQLLMSGLPIIDVQDWKRHTEYLGVYQRQGEQHKIIRWFWEVVEDRLDEESRARLLQFTTGGCNVPAQGFKALQSNDGNFRRFNIQSVRREECIFPRAHTCFNKLDLPVYETKEELEGYLTLVINMEITGFTID 1038 +L AA+PF+ K WF +Q+A ++Q PW GHI+++V R LLE S S+ MR+ R +FI EPGVDAGG+ REWF LVS L +P L+ INP + A D L+Y++F GR+ GKAL + Q + L PL KH+LG P+T +DLE +D D Y +LC ++D +E LDFTV + G ELK G + +T N +Y+ L +R+RLLD VK Q+ LL G Y+VVP+ LLSVFD+QEL+LL+ GLP ID++DWKR+TEY G Y+R+G HK+++WFWEVV D DEE +ARLLQF TG VPAQGF+ALQ ND N R+F I S+ +FP+AHTCFN++DLP+Y++K++L+ +LT+ I ME TGF ID Sbjct: 352 ELSRYAAMPFQHKEAWFRQQIA-KLQVPWEDGHIKINVRRENLLEDSMEATESITQADMRKIFRFEFIAEPGVDAGGVAREWFQLVSDMLFNPDFALWSYSSINQMCMQINPSSGIA---NDEHLRYFHFTGRLLGKALFDRQIVAGHLVRPLYKHILGWPLTVADLEQLDADTYANLCKLKDLDDVEVCC---LDFTVTEDHWGTAQTVELKSDGANCTVTNSNVDDYIQLQMRYRLLDRVKEQVKALLIGFYDVVPEALLSVFDFQELELLLCGLPEIDIEDWKRNTEYTGDYERKGSSHKVVKWFWEVVVDDFDEEHKARLLQFVTGTSGVPAQGFRALQGNDNNIRKFTINSIPETVSVFPKAHTCFNRIDLPLYDSKKKLKKFLTMAIQMEATGFDID 747
BLAST of NO28G00030 vs. NCBI_GenBank
Match: OQR85118.1 (HECT E3 ubiquitin ligase [Achlya hypogyna]) HSP 1 Score: 381.3 bits (978), Expect = 9.300e-102 Identity = 194/403 (48.14%), Postives = 264/403 (65.51%), Query Frame = 0 Query: 638 DLDAVAALPFRQKHLWFVEQLAQRVQQPWSQGHIRLDVARSKLLEGSFGQIMSLHPGVMRRWMRVQFINEPGVDAGGLEREWFVLVSQALMDPALGLFV--QQHGAYSINPCAMAAVGDRDLALQYYYFAGRVFGKALLEHQTLPVALSLPLLKHLLGTPITFSDLEMVDPDLYRSLCWVRDCRSMEALAALHLDFTVASETLGKRTVH-ELKPGGKDIALTLENKKEYLALMLRHRLLDGVKRQIWQLLRGVYEVVPKDLLSVFDYQELQLLMSGLPIIDVQDWKRHTEYLGVYQRQGEQHKIIRWFWEVVEDRLDEESRARLLQFTTGGCNVPAQGFKALQSNDGNFRRFNIQSVRREECIFPRAHTCFNKLDLPVYETKEELEGYLTLVINMEITGFTID 1038 +L V+AL F+QKH WFV Q ++ PW GH+ L++ RS LL S Q++ P + + MR++F+NEPGVDAGGLEREWF L++Q + D + GLF H +Y + + A D L Y+ GR G+AL E + L+LP+ KHLLG PITFSDLE +D DLY +L W++ + +E+L LDF+V+ G + +L P G++IA+T +NK EY+ L + ++ + Q+ L++GVY VVP +LLSVFD+QEL+LLM G+P I+V DWK HT Y+G Q +I WFWE+VED E RARLLQFTTG VP QGFK L NDG F IQ +R+EEC++PRAHTCFN+LDLP+Y T+++LE L +VI ME+TGFTI+ Sbjct: 266 ELKTVSALTFQQKHAWFV-QYTSTMEIPWEYGHMLLEIDRSNLLHNSCEQLLWATPDQLHQSMRIKFLNEPGVDAGGLEREWFTLMTQEIFDESTGLFTSCMGHNSYMVRATSNEASEDH---LMYFQAIGRFLGRALFEGMLIDAHLALPMYKHLLGIPITFSDLEFIDVDLYNNLRWLKQNKGVESLC---LDFSVSVPQYGSAPLTVDLCPNGRNIAVTDDNKDEYVYLRFKWIMMSSISYQLASLVKGVYSVVPAELLSVFDHQELELLMCGIPDINVADWKAHTTYIGDCDAQ-----VIDWFWEIVED-FSTEQRARLLQFTTGSARVPVQGFKTLTMNDGRICLFAIQGIRKEECLYPRAHTCFNRLDLPMYSTRKDLETALMMVIKMEVTGFTIE 655
BLAST of NO28G00030 vs. NCBI_GenBank
Match: XP_024574007.1 (hect e3 ubiquitin [Plasmopara halstedii] >CEG37638.1 hect e3 ubiquitin [Plasmopara halstedii]) HSP 1 Score: 380.9 bits (977), Expect = 1.200e-101 Identity = 202/409 (49.39%), Postives = 275/409 (67.24%), Query Frame = 0 Query: 631 LPEDALPDLDAVAALPFRQKHLWFVEQLAQRVQQPWSQGHIRLDVARSKLLEGSFGQIMSLHPGVMRRWMRVQFINEPGVDAGGLEREWFVLVSQALMDPALGLFVQQHG---AYSINPCAMAAVGDRDLALQYYYFAGRVFGKALLEHQTLPVALSLPLLKHLLGTPITFSDLEMVDPDLYRSLCWVRDCRSMEALAALHLDFTVASETL-GKRTVHELKPGGKDIALTLENKKEYLALMLRHRLLDGVKRQIWQLLRGVYEVVPKDLLSVFDYQELQLLMSGLPIIDVQDWKRHTEYLGVYQRQGEQHKIIRWFWEVVEDRLDEESRARLLQFTTGGCNVPAQGFKALQSNDGNFRRFNIQSVRREECIFPRAHTCFNKLDLPVYETKEELEGYLTLVINMEITGFT 1036 + E L L+ VAALPF+ K+ WF+EQ + + +PW GH+++ V R +L S Q++ + + +R++FI E +DAGGLEREWF LV++ L D +GLF+ H AY INP ++ A D L Y+ AGR+ G+ALLE Q + L+LP+LKHLLG PI+FSDLE D ++Y SL W+++ ++AL LDFTV + L G+ ELK GGKDI LT ENK+EY+ L LR+ +LD Q+ L+ GV+EV+P++L+ VFDYQEL+L++ G+P IDV DWK HT+ V E+ ++ WFWE+VE DEE RARLLQFTTG VP QGFKAL S DG F +++V E +PRAHTCFN++DLP+Y+TK+ELE L+LVINME+TGFT Sbjct: 287 ISEQDLEILEQVAALPFKDKYAWFLEQTSALI-KPWEDGHLKMRVHRENILVESMEQLLGVQMEHIHMPLRIEFIGEVAIDAGGLEREWFSLVTERLFDETIGLFMCAHVDSLAYVINPNSVEASADH---LLYFRGAGRLLGRALLEGQLMKAHLALPVLKHLLGVPISFSDLEFFDQEVYNSLKWMKENDGVDALG---LDFTVTNRKLNGEVETIELKEGGKDIELTDENKREYIYLRLRYIMLDSYAEQLQHLMAGVFEVIPQELILVFDYQELELVLCGVPSIDVDDWKAHTQ---VSDELPEE--LLSWFWEIVESFTDEE-RARLLQFTTGSSRVPVQGFKALTSYDGRICHFTLKAVTFPENAYPRAHTCFNRIDLPLYKTKKELEDVLSLVINMEVTGFT 682
BLAST of NO28G00030 vs. NCBI_GenBank
Match: CCA27003.1 (HECT E3 ubiquitin ligase putative [Albugo laibachii Nc14]) HSP 1 Score: 379.0 bits (972), Expect = 4.600e-101 Identity = 206/451 (45.68%), Postives = 286/451 (63.41%), Query Frame = 0 Query: 601 SSPGYISLMGPREGHMDWLPACL------PIPPTPVLPEDALPDLDAVAALPFRQKHLWFVEQLAQRVQQPWSQGHIRLDVARSKLLEGSFGQIMSLHPGVMRRWMRVQFINEPGVDAGGLEREWFVLVSQALMDPALGLFVQQHG---AYSINPCAMAAVGDRDLALQYYYFAGRVFGKALLEHQTLPVALSLPLLKHLLGTPITFSDLEMVDPDLYRSLCWVRDCRSMEALAALHLDFTV-ASETLGKRTVHELKPGGKDIALTLENKKEYLALMLRHRLLDGVKRQIWQLLRGVYEVVPKDLLSVFDYQELQLLMSGLPIIDVQDWKRHTE--YLGVYQRQGEQHKIIRWFWEVVEDRLDEESRARLLQFTTGGCNVPAQGFKALQSNDGNFRRFNIQSV---RREECIFPRAHTCFNKLDLPVYETKEELEGYLTLVINMEITGFTI 1037 SS GY+ + + G++ W+PA PI T + D +AVAALPFRQK W +++L +++ W GH+ L + R +L+ S +M + +R+ +R++FI EPG+DAGGL REW L+ + L D + GLF H +Y INP + D L Y F GR+ K LLE Q L V +LP LKHLLG PI+FSDLE +D DLYRS CW+RD ++++L LDF + + G ELKP GK+I + ENK+EYL L++++++ D V Q+ +L+G+Y+++P+ LL+VFDYQEL+LL+ G+P IDV DW+ HT+ Y + Q + K + WFWEVV +E RARLLQF TG VP +GFKAL S+DG RRF I V +FP+AHTCFN++DLP+YE+KE+LE YLTLVINMEITGF++ Sbjct: 140 SSVGYVRHV-DKHGNVAWVPAESITHEPDPIDTTEFPRCSTVIDFEAVAALPFRQKVRWLLQEL-EKIAISWEDGHLLLKIRRDAVLDESMRLLMLVPASDLRQRLRIEFIEEPGLDAGGLMREWVTLLCEQLFDESYGLFQATHVENLSYWINPNSGQIHPDH---LISYQFTGRLIAKCLLEGQLLTVYFALPFLKHLLGVPISFSDLEFLDEDLYRSACWLRDNSNVDSLC---LDFAMQRRDAQGDLITEELKPDGKNIVVNDENKQEYLELLVKYKMFDTVHEQVNAILQGLYDIIPRTLLAVFDYQELELLLCGVPSIDVDDWQSHTDVKYQEIDQPNRREKKAVEWFWEVVSS-FSQEKRARLLQFATGSSRVPVEGFKALLSSDGRVRRFGIHLVSCGTPPAGLFPQAHTCFNRIDLPIYESKEQLETYLTLVINMEITGFSM 581
BLAST of NO28G00030 vs. NCBI_GenBank
Match: XP_009538508.1 (hypothetical protein PHYSODRAFT_353072 [Phytophthora sojae] >EGZ06611.1 hypothetical protein PHYSODRAFT_353072 [Phytophthora sojae]) HSP 1 Score: 377.9 bits (969), Expect = 1.000e-100 Identity = 201/409 (49.14%), Postives = 275/409 (67.24%), Query Frame = 0 Query: 631 LPEDALPDLDAVAALPFRQKHLWFVEQLAQRVQQPWSQGHIRLDVARSKLLEGSFGQIMSLHPGVMRRWMRVQFINEPGVDAGGLEREWFVLVSQALMDPALGLFVQQHG---AYSINPCAMAAVGDRDLALQYYYFAGRVFGKALLEHQTLPVALSLPLLKHLLGTPITFSDLEMVDPDLYRSLCWVRDCRSMEALAALHLDFTVASETL-GKRTVHELKPGGKDIALTLENKKEYLALMLRHRLLDGVKRQIWQLLRGVYEVVPKDLLSVFDYQELQLLMSGLPIIDVQDWKRHTEYLGVYQRQGEQHKIIRWFWEVVEDRLDEESRARLLQFTTGGCNVPAQGFKALQSNDGNFRRFNIQSVRREECIFPRAHTCFNKLDLPVYETKEELEGYLTLVINMEITGFT 1036 + E L L+ VAALPF+ K+ WF+EQ + + +PW GH+++ V R +L S Q++ + + +R++FI E +DAGGLEREWF LV++ L D +GLF+ H AY INP ++ A D L Y+ AGR+ G+ALLE Q + L+LP+LKHLLG PI+FSDLE D ++Y SL W+++ ++AL LDFTV + L G+ ELK GGKDI LT ENK+EY+ L LR+ +LD Q+ L+ GV+EV+P++L+ VFDYQEL+L++ G+P IDV DWK HT+ V E+ ++ WFWE+VE DEE RARLLQFTTG VP QGFKAL S DG F +++V E +PRAHTCFN++DLP+Y++K+ELE L+LVINME+TGFT Sbjct: 289 ISEQDLEILEQVAALPFKDKYAWFLEQTSALI-KPWEDGHLKMRVHRENILVESMEQLLGVQMEHIHMPLRIEFIGEVAIDAGGLEREWFSLVTERLFDETIGLFMCAHVDSLAYVINPNSVEASADH---LLYFRGAGRLLGRALLEGQLMKAHLALPVLKHLLGVPISFSDLEFFDQEVYNSLKWMKENDGVDALG---LDFTVTNRKLNGEVETIELKEGGKDIELTDENKQEYIYLRLRYIMLDSYAEQLQHLMAGVFEVIPQELILVFDYQELELVLCGVPSIDVDDWKAHTQ---VSDELPEE--LLSWFWEIVEAFSDEE-RARLLQFTTGSSRVPVQGFKALTSYDGRICHFTLKAVAFPENAYPRAHTCFNRIDLPLYKSKKELEDVLSLVINMEVTGFT 684
BLAST of NO28G00030 vs. NCBI_GenBank
Match: ETI36526.1 (hypothetical protein F443_17357 [Phytophthora parasitica P1569] >ETK76776.1 hypothetical protein L915_16877 [Phytophthora parasitica] >ETK76797.1 hypothetical protein L915_16875 [Phytophthora parasitica] >ETL30206.1 hypothetical protein L916_16780 [Phytophthora parasitica] >ETL83434.1 hypothetical protein L917_16611 [Phytophthora parasitica] >ETM36649.1 hypothetical protein L914_16701 [Phytophthora parasitica] >ETO65268.1 hypothetical protein F444_17395 [Phytophthora parasitica P1976] >ETP06371.1 hypothetical protein F441_17229 [Phytophthora parasitica CJ01A1] >ETP34474.1 hypothetical protein F442_17211 [Phytophthora parasitica P10297] >KUF95567.1 Ubiquitin modifier-activating enzyme 1 [Phytophthora nicotianae]) HSP 1 Score: 377.9 bits (969), Expect = 1.000e-100 Identity = 201/409 (49.14%), Postives = 275/409 (67.24%), Query Frame = 0 Query: 631 LPEDALPDLDAVAALPFRQKHLWFVEQLAQRVQQPWSQGHIRLDVARSKLLEGSFGQIMSLHPGVMRRWMRVQFINEPGVDAGGLEREWFVLVSQALMDPALGLFVQQHG---AYSINPCAMAAVGDRDLALQYYYFAGRVFGKALLEHQTLPVALSLPLLKHLLGTPITFSDLEMVDPDLYRSLCWVRDCRSMEALAALHLDFTVASETL-GKRTVHELKPGGKDIALTLENKKEYLALMLRHRLLDGVKRQIWQLLRGVYEVVPKDLLSVFDYQELQLLMSGLPIIDVQDWKRHTEYLGVYQRQGEQHKIIRWFWEVVEDRLDEESRARLLQFTTGGCNVPAQGFKALQSNDGNFRRFNIQSVRREECIFPRAHTCFNKLDLPVYETKEELEGYLTLVINMEITGFT 1036 + E L L+ VAALPF+ K+ WF+EQ + + +PW GH+++ V R +L S Q++ + + +R++FI E +DAGGLEREWF LV++ L D +GLF+ H AY INP ++ A D L Y+ AGR+ G+ALLE Q + L+LP+LKHLLG PI+FSDLE D ++Y SL W+++ ++AL LDFTV + L G+ ELK GGKDI LT ENK+EY+ L LR+ +LD Q+ L+ GV+EV+P++L+ VFDYQEL+L++ G+P IDV DWK HT+ V E+ ++ WFWE+VE DEE RARLLQFTTG VP QGFKAL S DG F +++V E +PRAHTCFN++DLP+Y++K+ELE L+LVINME+TGFT Sbjct: 286 ISEQDLEILEQVAALPFKDKYAWFLEQTSALI-KPWEDGHLKMRVHRENILVESMEQLLGVQMEHIHMPLRIEFIGEVAIDAGGLEREWFSLVTERLFDETIGLFMCAHVDSLAYVINPNSVEASADH---LLYFRGAGRLLGRALLEGQLMKAHLALPVLKHLLGVPISFSDLEFFDQEVYNSLKWMKENDGVDALG---LDFTVTNRKLNGEVETIELKEGGKDIELTDENKQEYIYLRLRYIMLDSYAEQLQHLMAGVFEVIPQELILVFDYQELELVLCGVPSIDVDDWKAHTQ---VSDELPEE--LLGWFWEIVEAFSDEE-RARLLQFTTGSSRVPVQGFKALTSYDGRICHFTLKAVAYPENAYPRAHTCFNRIDLPLYKSKKELEDVLSLVINMEVTGFT 681
BLAST of NO28G00030 vs. NCBI_GenBank
Match: XP_008895828.1 (hypothetical protein PPTG_03813 [Phytophthora parasitica INRA-310] >ETN18108.1 hypothetical protein PPTG_03813 [Phytophthora parasitica INRA-310]) HSP 1 Score: 377.9 bits (969), Expect = 1.000e-100 Identity = 201/409 (49.14%), Postives = 275/409 (67.24%), Query Frame = 0 Query: 631 LPEDALPDLDAVAALPFRQKHLWFVEQLAQRVQQPWSQGHIRLDVARSKLLEGSFGQIMSLHPGVMRRWMRVQFINEPGVDAGGLEREWFVLVSQALMDPALGLFVQQHG---AYSINPCAMAAVGDRDLALQYYYFAGRVFGKALLEHQTLPVALSLPLLKHLLGTPITFSDLEMVDPDLYRSLCWVRDCRSMEALAALHLDFTVASETL-GKRTVHELKPGGKDIALTLENKKEYLALMLRHRLLDGVKRQIWQLLRGVYEVVPKDLLSVFDYQELQLLMSGLPIIDVQDWKRHTEYLGVYQRQGEQHKIIRWFWEVVEDRLDEESRARLLQFTTGGCNVPAQGFKALQSNDGNFRRFNIQSVRREECIFPRAHTCFNKLDLPVYETKEELEGYLTLVINMEITGFT 1036 + E L L+ VAALPF+ K+ WF+EQ + + +PW GH+++ V R +L S Q++ + + +R++FI E +DAGGLEREWF LV++ L D +GLF+ H AY INP ++ A D L Y+ AGR+ G+ALLE Q + L+LP+LKHLLG PI+FSDLE D ++Y SL W+++ ++AL LDFTV + L G+ ELK GGKDI LT ENK+EY+ L LR+ +LD Q+ L+ GV+EV+P++L+ VFDYQEL+L++ G+P IDV DWK HT+ V E+ ++ WFWE+VE DEE RARLLQFTTG VP QGFKAL S DG F +++V E +PRAHTCFN++DLP+Y++K+ELE L+LVINME+TGFT Sbjct: 286 ISEQDLEILEQVAALPFKDKYAWFLEQTSALI-KPWEDGHLKMRVHRENILVESMEQLLGVQMEHIHMPLRIEFIGEVAIDAGGLEREWFSLVTERLFDETIGLFMCAHVDSLAYVINPNSVEASADH---LLYFRGAGRLLGRALLEGQLMKAHLALPVLKHLLGVPISFSDLEFFDQEVYNSLKWMKENDGVDALG---LDFTVTNRKLNGEVETIELKEGGKDIELTDENKQEYIYLRLRYIMLDSYAEQLQHLMAGVFEVIPQELILVFDYQELELVLCGVPSIDVDDWKAHTQ---VSDELPEE--LLGWFWEIVEAFSDEE-RARLLQFTTGSSRVPVQGFKALTSYDGRICHFTLKAVAYPENAYPRAHTCFNRIDLPLYKSKKELEDVLSLVINMEVTGFT 681
BLAST of NO28G00030 vs. NCBI_GenBank
Match: POM69742.1 (HECT E3 ubiquitin ligase [Phytophthora palmivora var. palmivora]) HSP 1 Score: 377.9 bits (969), Expect = 1.000e-100 Identity = 201/409 (49.14%), Postives = 275/409 (67.24%), Query Frame = 0 Query: 631 LPEDALPDLDAVAALPFRQKHLWFVEQLAQRVQQPWSQGHIRLDVARSKLLEGSFGQIMSLHPGVMRRWMRVQFINEPGVDAGGLEREWFVLVSQALMDPALGLFVQQHG---AYSINPCAMAAVGDRDLALQYYYFAGRVFGKALLEHQTLPVALSLPLLKHLLGTPITFSDLEMVDPDLYRSLCWVRDCRSMEALAALHLDFTVASETL-GKRTVHELKPGGKDIALTLENKKEYLALMLRHRLLDGVKRQIWQLLRGVYEVVPKDLLSVFDYQELQLLMSGLPIIDVQDWKRHTEYLGVYQRQGEQHKIIRWFWEVVEDRLDEESRARLLQFTTGGCNVPAQGFKALQSNDGNFRRFNIQSVRREECIFPRAHTCFNKLDLPVYETKEELEGYLTLVINMEITGFT 1036 + E L L+ VAALPF+ K+ WF+EQ + + +PW GH+++ V R +L S Q++ + + +R++FI E +DAGGLEREWF LV++ L D +GLF+ H AY INP ++ A D L Y+ AGR+ G+ALLE Q + L+LP+LKHLLG PI+FSDLE D ++Y SL W+++ ++AL LDFTV + L G+ ELK GGKDI LT ENK+EY+ L LR+ +LD Q+ L+ GV+EV+P++L+ VFDYQEL+L++ G+P IDV DWK HT+ V E+ ++ WFWE+VE DEE RARLLQFTTG VP QGFKAL S DG F +++V E +PRAHTCFN++DLP+Y++K+ELE L+LVINME+TGFT Sbjct: 282 ISEQDLEILEQVAALPFKDKYAWFLEQTSALI-KPWEDGHLKMRVHRENILVESMEQLLGVQMEHIHMPLRIEFIGEVAIDAGGLEREWFSLVTERLFDETIGLFMCAHVDSLAYVINPNSVEASADH---LLYFRGAGRLLGRALLEGQLMKAHLALPVLKHLLGVPISFSDLEFFDQEVYNSLKWMKENDGVDALG---LDFTVTNRKLNGEVETIELKEGGKDIELTDENKQEYIYLRLRYIMLDSYAEQLQHLMAGVFEVIPQELILVFDYQELELVLCGVPSIDVDDWKAHTQ---VSDELPEE--LLMWFWEIVEAFSDEE-RARLLQFTTGSSRVPVQGFKALTSYDGRICHFTLKAVAFPENAYPRAHTCFNRIDLPLYKSKKELEDVLSLVINMEVTGFT 677 The following BLAST results are available for this feature:
BLAST of NO28G00030 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO28G00030 ID=NO28G00030|Name=NO28G00030|organism=Nannochloropsis oceanica|type=gene|length=6699bpback to top protein sequence of NO28G00030.1 >NO28G00030.1-protein ID=NO28G00030.1-protein|Name=NO28G00030.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1038bpback to top protein sequence of NO28G00030.2 >NO28G00030.2-protein ID=NO28G00030.2-protein|Name=NO28G00030.2|organism=Nannochloropsis oceanica|type=polypeptide|length=862bpback to top protein sequence of NO28G00030.3 >NO28G00030.3-protein ID=NO28G00030.3-protein|Name=NO28G00030.3|organism=Nannochloropsis oceanica|type=polypeptide|length=811bpback to top Synonyms
Publications
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