NO27G01860, NO27G01860 (gene) Nannochloropsis oceanica
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Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO27G01860 vs. NCBI_GenBank
Match: CBN76656.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 370.9 bits (951), Expect = 2.100e-98 Identity = 214/479 (44.68%), Postives = 279/479 (58.25%), Query Frame = 0
Query: 1256 LEGSREVVSVAEEAGGRE----AAAEQAW---EATAQGKALWQPRVPTAGTXXXXXXXXXXXXXXXXXXXXXQALACKIPPTGRVVCILEPKHQTDLVGRLTPRTAVKEGQPLSQKDGVVDFVPNDPRAPALLIPRLDCPFAFLQRPSDFADKIFIARMKKTWNHFSARPFGENVRCLGEVGEISVETEALLKANGVDHGDFPQEVLDSLQAAILDGKKREGGXXXXXXXXAGEDLGVLRVDHNWTVPPAELEKRRDFRSHRVFTIDPATAKDLDDALHILDLGNGIVELGVHIADVSFFVGEDTALDQEAARRCTTVYLVQKVVPMLPPLLCEQLCSLNPNVERLTFSVVWRMHKDGTLVENDTVWYGRSVIRSCCKLDYGTAQELVDRADLSD----LSPFWWDPARRPIPSVSGQTCAGVQESMKLMHEVAMSRRRLRFSKDGGALALNRGKLSFTLDQDGNPAVFAPYPLRDSNR 1724
L + E +S+ E + G + A + AW E LW+P AG A + P G+VV I+E H+ D +G L + +K LS KD V F P D R P +L+ R + P F+ P +A+ IF+A +K TW+ S P+G NVR +GE G I ET+ALL NGV+HGDFP+ VL L+ A L K E G AG D+ R W +P E+ KRRD R+ R+FTIDP A+DLDDAL I L +G E+GVHIADV++FV ++ LD+EA RR TTVYLVQ+ +PMLPPLLCE+LCSLNP V+RLT+S +WRM+ DGTLV+ W+GR+VIRSCCKLDY TAQ +++ L D SP WD RRP G+ C + + LM+ +A RR RF + GAL+LN KL+F LD +GNPA F YP+RDSNR
Sbjct: 85 LAAALESISITENSAGADETKGATSCPAWDGPEVAPPVDGLWRPSPKVAG------GAQGGNRSDNLCEAGVLAAQGNLQPRGKVVFIMESAHREDHMGSLVWSSPLKADGKLSDKDSYVMFHPTDRRVPHMLVARGELPSIFVDNPGAYANSIFMACVKGTWSATSKLPWGHNVRFVGEAGAIHAETKALLCQNGVNHGDFPRTVLRGLE-AFLPPKNAEDG------IDAGADIRGSR----WKIPEEEISKRRDLRATRIFTIDPTGARDLDDALSITPLADGTFEIGVHIADVTYFVRPNSDLDREARRRATTVYLVQQAIPMLPPLLCEELCSLNPQVDRLTYSCIWRMNVDGTLVDK-PAWFGRTVIRSCCKLDYQTAQYMIEGTILPDSASSTSPELWDRNRRPTEFTCGEVC----QDVLLMNSLAKRRRAKRF--ESGALSLNTPKLTFKLDDNGNPADFGSYPIRDSNR 539
BLAST of NO27G01860 vs. NCBI_GenBank
Match: XP_013775846.1 (DIS3-like exonuclease 2 [Limulus polyphemus] >XP_022243135.1 DIS3-like exonuclease 2 [Limulus polyphemus] >XP_022243136.1 DIS3-like exonuclease 2 [Limulus polyphemus] >XP_022243137.1 DIS3-like exonuclease 2 [Limulus polyphemus]) HSP 1 Score: 308.5 bits (789), Expect = 1.300e-79 Identity = 170/398 (42.71%), Postives = 233/398 (58.54%), Query Frame = 0
Query: 1327 IPPTGRVVCILEPKHQTDLVGRLTPRTAVKEGQPLSQKDGVVDFVPNDPRAPALLIPRLDCPFAFLQRPSDFADKIFIARMKKTWNHFSARPFGENVRCLGEVGEISVETEALLKANGVDHGDFPQEVLDSLQAAILDGKKREGGXXXXXXXXAGEDLGVLRVDHNWTVPPAELEKRRDFRSHRVFTIDPATAKDLDDALHILDLGNGIVELGVHIADVSFFVGEDTALDQEAARRCTTVYLVQKVVPMLPPLLCEQLCSLNPNVERLTFSVVWRMHKDGTLVENDTVWYGRSVIRSCCKLDYGTAQELVDRADLSDLSPFWWDPARRPIPSVSGQTCAGVQESMKLMHEVAMSRRRLRFSKDGGALALNRGKLSFTLDQD-GNPAVFAPYPLRDSNR 1724
+ TG+VV I+E KH G + + L F P D + P + +P +CP F +RP+DFA +FIAR+ W+ S P G R LGE G+I ETE +L NGVD+ +FP+E L L D W +P EL +R+DFR+H VFT+DP+TA+DLDDAL LG+G+ E+GVHIADV+FF+ ED+ LD A + T+VYLVQKVVPMLP +LCEQLCSLNPN +RLTFSVVW + ++GT+V W+GRSVIRSC KL Y AQ++++ + + W P P P G T +++S+ +H +A++ RR RF + GAL L++ KL FTLD + G P+ ++ Y +DSNR
Sbjct: 612 VQKTGKVVYIVEQKHSRAAAGYIKLQQDKNPNWTL--------FCPTDSKIPRIFVPMNECPQGFFERPADFAKTLFIARITH-WDRSSTFPRGTLQRSLGEAGQIEPETEGILLENGVDYSEFPEECLHGLP-----------------------------TDIPWQIPETELIQRKDFRNHCVFTVDPSTARDLDDALSCCPLGDGLFEIGVHIADVTFFLKEDSLLDLIARSKATSVYLVQKVVPMLPRILCEQLCSLNPNEDRLTFSVVWTLTQEGTVVNE---WFGRSVIRSCVKLSYEHAQDMIEHSGKT------WGPGELP-PVSGGFTVKDIEQSICTLHSIAVNLRRKRF--EDGALRLDQTKLQFTLDSETGLPSGYSVYEQKDSNR 959
BLAST of NO27G01860 vs. NCBI_GenBank
Match: ETL28328.1 (hypothetical protein L916_18287, partial [Phytophthora parasitica]) HSP 1 Score: 292.0 bits (746), Expect = 1.200e-74 Identity = 170/402 (42.29%), Postives = 228/402 (56.72%), Query Frame = 0
Query: 1329 PTGRVVCILEPKHQTDLVGRLTPRTAVKE-GQPLSQKDGVVDFVPNDPRAP-ALLIPRLDCPFAFLQRPSDFADKIFIARMKKTWNHFSARPFGENVRCLGEVGEISVETEALLKANGVDHG--DFPQEVLDSLQAAILDGKKREGGXXXXXXXXAGEDLGVLRVDHNWTVPPAELEKRRDFRSHRVFTIDPATAKDLDDALHI--LDLGNGIVELGVHIADVSFFVGEDTALDQEAARRCTTVYLVQKVVPMLPPLLCEQLCSLNPNVERLTFSVVWRMHKDGTLVENDTVWYGRSVIRSCCKLDYGTAQELVDRADLSDLSPFWWDPARRPIPSVSGQ-TCAGVQESMKLMHEVAMSRRRLRFSKDGGALALNRGKLSFTLDQDGNPAVFAPYPLRDSNR 1724
PT VV IL + +G L P T VK+ PLS D F +D R P + IPRL P F+ RP ++ + K W+ P GE V+ +GE I A+L +G+ DF +L+ LD K G W +PP EL+KRRDFR ++F+IDP A+DLDDALHI LD E+GVHIADV+ F+ ++ LDQEA R T+VYL +V+PMLP +LCE+LCSL P V+RL FSVVW+M+ DGTLV+ W+G+S+IRSCCKLDYG+AQ+++D SD W+ RRPIP + T A V +S+K + + +RR +RF + GA++LN KL F+LD GNP + Y L+DSNR
Sbjct: 464 PTASVVFILAQGNSNGFIGSLEPATKVKDLTSPLSSNDNYAYFNADDQRLPRRIRIPRLQLPDEFVSRPLLYSKTMLCFCRIKAWSTRHQSPMGEFVKTVGEYTGIETGISAILSKHGLQSHTLDFDSSILNE-----LDEKYGTSG-------------------EKWEIPPEELQKRRDFRDTQIFSIDPYNARDLDDALHIRALDDARTKFEIGVHIADVTHFIEHNSLLDQEARSRATSVYLANRVLPMLPRILCEKLCSLQPQVDRLAFSVVWQMNVDGTLVDGAEPWFGKSIIRSCCKLDYGSAQKMLDGIITSD-GVDEWEEDRRPIPGANPSITNATVIQSVKDLWSIGENRRAMRF--ETGAVSLNDVKLVFSLDAKGNPTRYGSYELKDSNR 838
BLAST of NO27G01860 vs. NCBI_GenBank
Match: XP_008896810.1 (hypothetical protein PPTG_05080 [Phytophthora parasitica INRA-310] >ETN17227.1 hypothetical protein PPTG_05080 [Phytophthora parasitica INRA-310]) HSP 1 Score: 292.0 bits (746), Expect = 1.200e-74 Identity = 170/402 (42.29%), Postives = 228/402 (56.72%), Query Frame = 0
Query: 1329 PTGRVVCILEPKHQTDLVGRLTPRTAVKE-GQPLSQKDGVVDFVPNDPRAP-ALLIPRLDCPFAFLQRPSDFADKIFIARMKKTWNHFSARPFGENVRCLGEVGEISVETEALLKANGVDHG--DFPQEVLDSLQAAILDGKKREGGXXXXXXXXAGEDLGVLRVDHNWTVPPAELEKRRDFRSHRVFTIDPATAKDLDDALHI--LDLGNGIVELGVHIADVSFFVGEDTALDQEAARRCTTVYLVQKVVPMLPPLLCEQLCSLNPNVERLTFSVVWRMHKDGTLVENDTVWYGRSVIRSCCKLDYGTAQELVDRADLSDLSPFWWDPARRPIPSVSGQ-TCAGVQESMKLMHEVAMSRRRLRFSKDGGALALNRGKLSFTLDQDGNPAVFAPYPLRDSNR 1724
PT VV IL + +G L P T VK+ PLS D F +D R P + IPRL P F+ RP ++ + K W+ P GE V+ +GE I A+L +G+ DF +L+ LD K G W +PP EL+KRRDFR ++F+IDP A+DLDDALHI LD E+GVHIADV+ F+ ++ LDQEA R T+VYL +V+PMLP +LCE+LCSL P V+RL FSVVW+M+ DGTLV+ W+G+S+IRSCCKLDYG+AQ+++D SD W+ RRPIP + T A V +S+K + + +RR +RF + GA++LN KL F+LD GNP + Y L+DSNR
Sbjct: 450 PTASVVFILAQGNSNGFIGSLEPATKVKDLTSPLSSNDNYAYFNADDQRLPRRIRIPRLQLPDEFVSRPLLYSKTMLCFCRIKAWSTRHQSPMGEFVKTVGEYTGIETGISAILSKHGLQSHTLDFDSSILNE-----LDEKYGTSG-------------------EKWEIPPEELQKRRDFRDTQIFSIDPYNARDLDDALHIRALDDARTKFEIGVHIADVTHFIEHNSLLDQEARSRATSVYLANRVLPMLPRILCEKLCSLQPQVDRLAFSVVWQMNVDGTLVDGAEPWFGKSIIRSCCKLDYGSAQKMLDGIITSD-GVDEWEEDRRPIPGANPSITNATVIQSVKDLWSIGENRRAMRF--ETGAVSLNDVKLVFSLDAKGNPTRYGSYELKDSNR 824
BLAST of NO27G01860 vs. NCBI_GenBank
Match: ETP04447.1 (hypothetical protein F441_18769, partial [Phytophthora parasitica CJ01A1]) HSP 1 Score: 292.0 bits (746), Expect = 1.200e-74 Identity = 170/402 (42.29%), Postives = 228/402 (56.72%), Query Frame = 0
Query: 1329 PTGRVVCILEPKHQTDLVGRLTPRTAVKE-GQPLSQKDGVVDFVPNDPRAP-ALLIPRLDCPFAFLQRPSDFADKIFIARMKKTWNHFSARPFGENVRCLGEVGEISVETEALLKANGVDHG--DFPQEVLDSLQAAILDGKKREGGXXXXXXXXAGEDLGVLRVDHNWTVPPAELEKRRDFRSHRVFTIDPATAKDLDDALHI--LDLGNGIVELGVHIADVSFFVGEDTALDQEAARRCTTVYLVQKVVPMLPPLLCEQLCSLNPNVERLTFSVVWRMHKDGTLVENDTVWYGRSVIRSCCKLDYGTAQELVDRADLSDLSPFWWDPARRPIPSVSGQ-TCAGVQESMKLMHEVAMSRRRLRFSKDGGALALNRGKLSFTLDQDGNPAVFAPYPLRDSNR 1724
PT VV IL + +G L P T VK+ PLS D F +D R P + IPRL P F+ RP ++ + K W+ P GE V+ +GE I A+L +G+ DF +L+ LD K G W +PP EL+KRRDFR ++F+IDP A+DLDDALHI LD E+GVHIADV+ F+ ++ LDQEA R T+VYL +V+PMLP +LCE+LCSL P V+RL FSVVW+M+ DGTLV+ W+G+S+IRSCCKLDYG+AQ+++D SD W+ RRPIP + T A V +S+K + + +RR +RF + GA++LN KL F+LD GNP + Y L+DSNR
Sbjct: 464 PTASVVFILAQGNSNGFIGSLEPATKVKDLTSPLSSNDNYAYFNADDQRLPRRIRIPRLQLPDEFVSRPLLYSKTMLCFCRIKAWSTRHQSPMGEFVKTVGEYTGIETGISAILSKHGLQSHTLDFDSSILNE-----LDEKYGTSG-------------------EKWEIPPEELQKRRDFRDTQIFSIDPYNARDLDDALHIRALDDARTKFEIGVHIADVTHFIEHNSLLDQEARSRATSVYLANRVLPMLPRILCEKLCSLQPQVDRLAFSVVWQMNVDGTLVDGAEPWFGKSIIRSCCKLDYGSAQKMLDGIITSD-GVDEWEEDRRPIPGANPSITNATVIQSVKDLWSIGENRRAMRF--ETGAVSLNDVKLVFSLDAKGNPTRYGSYELKDSNR 838
BLAST of NO27G01860 vs. NCBI_GenBank
Match: KUF92307.1 (DIS3 exonuclease 2 [Phytophthora nicotianae]) HSP 1 Score: 292.0 bits (746), Expect = 1.200e-74 Identity = 170/402 (42.29%), Postives = 228/402 (56.72%), Query Frame = 0
Query: 1329 PTGRVVCILEPKHQTDLVGRLTPRTAVKE-GQPLSQKDGVVDFVPNDPRAP-ALLIPRLDCPFAFLQRPSDFADKIFIARMKKTWNHFSARPFGENVRCLGEVGEISVETEALLKANGVDHG--DFPQEVLDSLQAAILDGKKREGGXXXXXXXXAGEDLGVLRVDHNWTVPPAELEKRRDFRSHRVFTIDPATAKDLDDALHI--LDLGNGIVELGVHIADVSFFVGEDTALDQEAARRCTTVYLVQKVVPMLPPLLCEQLCSLNPNVERLTFSVVWRMHKDGTLVENDTVWYGRSVIRSCCKLDYGTAQELVDRADLSDLSPFWWDPARRPIPSVSGQ-TCAGVQESMKLMHEVAMSRRRLRFSKDGGALALNRGKLSFTLDQDGNPAVFAPYPLRDSNR 1724
PT VV IL + +G L P T VK+ PLS D F +D R P + IPRL P F+ RP ++ + K W+ P GE V+ +GE I A+L +G+ DF +L+ LD K G W +PP EL+KRRDFR ++F+IDP A+DLDDALHI LD E+GVHIADV+ F+ ++ LDQEA R T+VYL +V+PMLP +LCE+LCSL P V+RL FSVVW+M+ DGTLV+ W+G+S+IRSCCKLDYG+AQ+++D SD W+ RRPIP + T A V +S+K + + +RR +RF + GA++LN KL F+LD GNP + Y L+DSNR
Sbjct: 420 PTASVVFILAQGNSNGFIGSLEPATKVKDLTSPLSSNDNYAYFNADDQRLPRRIRIPRLQLPDEFVSRPLLYSKTMLCFCRIKAWSTRHQNPMGEFVKTVGEYTGIETGISAILSKHGLQSHTLDFDSSILNE-----LDEKYGTSG-------------------EKWEIPPEELQKRRDFRDTQIFSIDPYNARDLDDALHIRALDDARTKFEIGVHIADVTHFIEHNSLLDQEARSRATSVYLANRVLPMLPRILCEKLCSLQPQVDRLAFSVVWQMNVDGTLVDGVEPWFGKSIIRSCCKLDYGSAQKMLDGIITSD-GVDEWEEDRRPIPGANPSITNATVIQSVKDLWSIGENRRAMRF--ETGAVSLNDVKLVFSLDAKGNPTRYGSYELKDSNR 794
BLAST of NO27G01860 vs. NCBI_GenBank
Match: ETI34553.1 (hypothetical protein F443_18958, partial [Phytophthora parasitica P1569] >ETM34782.1 hypothetical protein L914_18193, partial [Phytophthora parasitica] >ETP32578.1 hypothetical protein F442_18739, partial [Phytophthora parasitica P10297]) HSP 1 Score: 291.6 bits (745), Expect = 1.600e-74 Identity = 170/402 (42.29%), Postives = 228/402 (56.72%), Query Frame = 0
Query: 1329 PTGRVVCILEPKHQTDLVGRLTPRTAVKE-GQPLSQKDGVVDFVPNDPRAP-ALLIPRLDCPFAFLQRPSDFADKIFIARMKKTWNHFSARPFGENVRCLGEVGEISVETEALLKANGVDHG--DFPQEVLDSLQAAILDGKKREGGXXXXXXXXAGEDLGVLRVDHNWTVPPAELEKRRDFRSHRVFTIDPATAKDLDDALHI--LDLGNGIVELGVHIADVSFFVGEDTALDQEAARRCTTVYLVQKVVPMLPPLLCEQLCSLNPNVERLTFSVVWRMHKDGTLVENDTVWYGRSVIRSCCKLDYGTAQELVDRADLSDLSPFWWDPARRPIPSVSGQ-TCAGVQESMKLMHEVAMSRRRLRFSKDGGALALNRGKLSFTLDQDGNPAVFAPYPLRDSNR 1724
PT VV IL + +G L P T VK+ PLS D F +D R P + IPRL P F+ RP ++ + K W+ P GE V+ +GE I A+L +G+ DF +L+ LD K G W +PP EL+KRRDFR ++F+IDP A+DLDDALHI LD E+GVHIADV+ F+ ++ LDQEA R T+VYL +V+PMLP +LCE+LCSL P V+RL FSVVW+M+ DGTLV+ W+G+S+IRSCCKLDYG+AQ+++D SD W+ RRPIP + T A V +S+K + + +RR +RF + GA++LN KL F+LD GNP + Y L+DSNR
Sbjct: 464 PTASVVFILAQGNSNGFIGSLEPATKVKDLTSPLSSNDNYAYFNADDQRLPRRIRIPRLQLPDEFVSRPLLYSKTMLCFCRIKAWSTRHQSPMGEFVKTVGEYTGIETGISAILSKHGLQSHTLDFDSSILNE-----LDEKYGTSG-------------------EKWEIPPEELQKRRDFRDTQIFSIDPYNARDLDDALHIRALDDARTKFEIGVHIADVTHFIEHNSLLDQEARSRATSVYLANRVLPMLPRILCEKLCSLQPQVDRLAFSVVWQMNVDGTLVDGVEPWFGKSIIRSCCKLDYGSAQKMLDGIITSD-GVDEWEEDRRPIPGANPSITNATVIQSVKDLWSIGENRRAMRF--ETGAVSLNDVKLVFSLDAKGNPTRYGSYELKDSNR 838
BLAST of NO27G01860 vs. NCBI_GenBank
Match: ETL81577.1 (hypothetical protein L917_18107, partial [Phytophthora parasitica]) HSP 1 Score: 291.6 bits (745), Expect = 1.600e-74 Identity = 170/402 (42.29%), Postives = 228/402 (56.72%), Query Frame = 0
Query: 1329 PTGRVVCILEPKHQTDLVGRLTPRTAVKE-GQPLSQKDGVVDFVPNDPRAP-ALLIPRLDCPFAFLQRPSDFADKIFIARMKKTWNHFSARPFGENVRCLGEVGEISVETEALLKANGVDHG--DFPQEVLDSLQAAILDGKKREGGXXXXXXXXAGEDLGVLRVDHNWTVPPAELEKRRDFRSHRVFTIDPATAKDLDDALHI--LDLGNGIVELGVHIADVSFFVGEDTALDQEAARRCTTVYLVQKVVPMLPPLLCEQLCSLNPNVERLTFSVVWRMHKDGTLVENDTVWYGRSVIRSCCKLDYGTAQELVDRADLSDLSPFWWDPARRPIPSVSGQ-TCAGVQESMKLMHEVAMSRRRLRFSKDGGALALNRGKLSFTLDQDGNPAVFAPYPLRDSNR 1724
PT VV IL + +G L P T VK+ PLS D F +D R P + IPRL P F+ RP ++ + K W+ P GE V+ +GE I A+L +G+ DF +L+ LD K G W +PP EL+KRRDFR ++F+IDP A+DLDDALHI LD E+GVHIADV+ F+ ++ LDQEA R T+VYL +V+PMLP +LCE+LCSL P V+RL FSVVW+M+ DGTLV+ W+G+S+IRSCCKLDYG+AQ+++D SD W+ RRPIP + T A V +S+K + + +RR +RF + GA++LN KL F+LD GNP + Y L+DSNR
Sbjct: 464 PTASVVFILAQGNSNGFIGSLEPATKVKDLTSPLSSNDNYAYFNADDQRLPRRIRIPRLQLPDEFVSRPLLYSKTMLCFCRIKAWSTRHQSPMGEFVKTVGEYTGIETGISAILSKHGLQSHTLDFDSSILNE-----LDEKYGTSG-------------------EKWEIPPEELQKRRDFRDTQIFSIDPYNARDLDDALHIRALDDARTKFEIGVHIADVTHFIEHNSLLDQEARSRATSVYLANRVLPMLPRILCEKLCSLQPQVDRLAFSVVWQMNVDGTLVDGVEPWFGKSIIRSCCKLDYGSAQKMLDGIITSD-GVDEWEEDRRPIPGANPSITNATVIQSVKDLWSIGENRRAMRF--ETGAVSLNDVKLVFSLDAKGNPTRYGSYELKDSNR 838
BLAST of NO27G01860 vs. NCBI_GenBank
Match: ETO63354.1 (hypothetical protein F444_18911, partial [Phytophthora parasitica P1976]) HSP 1 Score: 291.6 bits (745), Expect = 1.600e-74 Identity = 170/402 (42.29%), Postives = 228/402 (56.72%), Query Frame = 0
Query: 1329 PTGRVVCILEPKHQTDLVGRLTPRTAVKE-GQPLSQKDGVVDFVPNDPRAP-ALLIPRLDCPFAFLQRPSDFADKIFIARMKKTWNHFSARPFGENVRCLGEVGEISVETEALLKANGVDHG--DFPQEVLDSLQAAILDGKKREGGXXXXXXXXAGEDLGVLRVDHNWTVPPAELEKRRDFRSHRVFTIDPATAKDLDDALHI--LDLGNGIVELGVHIADVSFFVGEDTALDQEAARRCTTVYLVQKVVPMLPPLLCEQLCSLNPNVERLTFSVVWRMHKDGTLVENDTVWYGRSVIRSCCKLDYGTAQELVDRADLSDLSPFWWDPARRPIPSVSGQ-TCAGVQESMKLMHEVAMSRRRLRFSKDGGALALNRGKLSFTLDQDGNPAVFAPYPLRDSNR 1724
PT VV IL + +G L P T VK+ PLS D F +D R P + IPRL P F+ RP ++ + K W+ P GE V+ +GE I A+L +G+ DF +L+ LD K G W +PP EL+KRRDFR ++F+IDP A+DLDDALHI LD E+GVHIADV+ F+ ++ LDQEA R T+VYL +V+PMLP +LCE+LCSL P V+RL FSVVW+M+ DGTLV+ W+G+S+IRSCCKLDYG+AQ+++D SD W+ RRPIP + T A V +S+K + + +RR +RF + GA++LN KL F+LD GNP + Y L+DSNR
Sbjct: 464 PTASVVFILAQGNSNGFIGSLEPATKVKDLTSPLSSNDNYAYFNADDQRLPRRIRIPRLQLPDEFVSRPLLYSKTMLCFCRIKAWSTRHQSPMGEFVKTVGEYTGIETGISAILSKHGLQSHTLDFDSSILNE-----LDEKYGTSG-------------------EKWEIPPEELQKRRDFRDTQIFSIDPYNARDLDDALHIRALDDARTKFEIGVHIADVTHFIEHNSLLDQEARSRATSVYLANRVLPMLPRILCEKLCSLQPQVDRLAFSVVWQMNVDGTLVDGVEPWFGKSIIRSCCKLDYGSAQKMLDGIITSD-GVDEWEEDRRPIPGANPSITNATVIQSVKDLWSIGENRRAMRF--ETGAVSLNDVKLVFSLDAKGNPTRYGSYELKDSNR 838
BLAST of NO27G01860 vs. NCBI_GenBank
Match: ETK74904.1 (hypothetical protein L915_18384, partial [Phytophthora parasitica]) HSP 1 Score: 291.2 bits (744), Expect = 2.100e-74 Identity = 170/402 (42.29%), Postives = 228/402 (56.72%), Query Frame = 0
Query: 1329 PTGRVVCILEPKHQTDLVGRLTPRTAVKE-GQPLSQKDGVVDFVPNDPRAP-ALLIPRLDCPFAFLQRPSDFADKIFIARMKKTWNHFSARPFGENVRCLGEVGEISVETEALLKANGVDHG--DFPQEVLDSLQAAILDGKKREGGXXXXXXXXAGEDLGVLRVDHNWTVPPAELEKRRDFRSHRVFTIDPATAKDLDDALHI--LDLGNGIVELGVHIADVSFFVGEDTALDQEAARRCTTVYLVQKVVPMLPPLLCEQLCSLNPNVERLTFSVVWRMHKDGTLVENDTVWYGRSVIRSCCKLDYGTAQELVDRADLSDLSPFWWDPARRPIPSVSGQ-TCAGVQESMKLMHEVAMSRRRLRFSKDGGALALNRGKLSFTLDQDGNPAVFAPYPLRDSNR 1724
PT VV IL + +G L P T VK+ PLS D F +D R P + IPRL P F+ RP ++ + K W+ P GE V+ +GE I A+L +G+ DF +L+ LD K G W +PP EL+KRRDFR ++F+IDP A+DLDDALHI LD E+GVHIADV+ F+ ++ LDQEA R T+VYL +V+PMLP +LCE+LCSL P V+RL FSVVW+M+ DGTLV+ W+G+S+IRSCCKLDYG+AQ+++D SD W+ RRPIP + T A V +S+K + + +RR +RF + GA++LN KL F+LD GNP + Y L+DSNR
Sbjct: 464 PTASVVFILAQGNSNGFIGSLEPATKVKDLTSPLSSNDNYAYFNADDQRLPRRIRIPRLQLPDEFVSRPLLYSKTMLCFCRIKAWSTRHQSPMGEFVKTVGEYTGIETGISAILSKHGLQSHTLDFDSSILNE-----LDEKYGTSG-------------------EKWEIPPEELQKRRDFRDTQIFSIDPYNARDLDDALHIRALDDARTKFEIGVHIADVTHFIEHNSLLDQEARSRATSVYLANRVLPMLPRILCEKLCSLQPQVDRLAFSVVWQMNVDGTLVDGAEPWFGKSIIRSCCKLDYGSAQKMLDGIITSD-GVDEWEEDRRPIPGANPSITNATVIQSVKDLWSIGENRRAMRF--ETGAVSLNDVKLVFSLDAMGNPTRYGSYELKDSNR 838 The following BLAST results are available for this feature:
BLAST of NO27G01860 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following gene feature(s) are orthologous to this gene:
The following polypeptide feature(s) derives from this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO27G01860 ID=NO27G01860|Name=NO27G01860|organism=Nannochloropsis oceanica|type=gene|length=11575bpback to top protein sequence of NO27G01860.3 >NO27G01860.3-protein ID=NO27G01860.3-protein|Name=NO27G01860.3|organism=Nannochloropsis oceanica|type=polypeptide|length=1706bpback to top protein sequence of NO27G01860.2 >NO27G01860.2-protein ID=NO27G01860.2-protein|Name=NO27G01860.2|organism=Nannochloropsis oceanica|type=polypeptide|length=1724bpback to top protein sequence of NO27G01860.1 >NO27G01860.1-protein ID=NO27G01860.1-protein|Name=NO27G01860.1|organism=Nannochloropsis oceanica|type=polypeptide|length=2052bpback to top Synonyms
Publications
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