NO27G01790, NO27G01790 (gene) Nannochloropsis oceanica

Overview
NameNO27G01790
Unique NameNO27G01790
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length7985
Alignment locationchr27:603863..611847 +

Link to JBrowse

Properties
Property NameValue
DescriptionRNA helicase family protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr27genomechr27:603863..611847 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0004386helicase activity
GO:0016787hydrolase activity
GO:0005524ATP binding
GO:0004386helicase activity
GO:0003676nucleic acid binding
GO:0000166nucleotide binding
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR011709DUF1605
IPR007502Helicase-assoc_dom
Homology
[Close]
BLAST of NO27G01790 vs. NCBI_GenBank
Match: GAX26203.1 (hypothetical protein FisN_16Lh020 [Fistulifera solaris])

HSP 1 Score: 226.1 bits (575), Expect = 5.300e-55
Identity = 150/421 (35.63%), Postives = 214/421 (50.83%), Query Frame = 0 
Query:  685 FLSLLLDPPEAATIRAALSTLEEIQAVVPKGDELRITPLGRHLAALPCPVRLGKMLIYGALLGVLTPALAIAACM-LVRNPLLSLQFREDRQEVET-----ARVRRLGIGGSFGKSDHLLLARAVEAY-LKEGGREGRRALCQEVGLSFERMCEVQTLISQLGRDMSSLGFPPAPSSLSSTRVERGGREGGSDGARALLATMDEKGGRAYWRLVKAAVGVGLYPN-VVKVVRPPFRYAKVAGGAVQVEAHARELSFYVFNKHKEPPVEPLASFYFPHKD---KEDRVYIHPCSINYSQGAYTVPWLVFSDVMRTTRAFVRDCTEVSPYALLLAANTLRMQHDXXXXXXXXXXXXXXXXXXXXXXXXXGWIRFAAVGRIGALVNALKRKVDELLEEKVRNPELELGDSPAARALVKLIATDG 1095
            F   L+DPP   +I AA STL ++ AV      L +TPLG HLA +P P  +GKMLI G +LG    +LA+AA M L R+P + +      +E  +     A   R  +  S G SDH +LA     + + E     RR++C  +GLSF  M ++  L+ QL   + SLGFPP+  S  + ++                           WR+V+A     L P+ +VKVVRP  ++ K   GA ++EAHAREL F++            A      KD    E+RV+IHP S N+S G Y+ PWLVF  ++RT++ F+RD TE + Y+LLL    L ++                           GW++ +A  RIGAL+  L+RKVDELL +KVR+P LE+  +   R ++KLI  DG
Sbjct: 1073 FFRSLIDPPTVESILAAESTLIQLSAVERVNTNLHLTPLGLHLAGIPAPPMIGKMLIMGCILGCRDASLAMAAGMSLGRSPFIRIDSNPKTKEPSSTFNLIALKNRTDLIESVGDSDHAVLAAVYSQWKVPENDSSRRRSVCDALGLSFSVMRDMDQLVKQLDSALVSLGFPPSADSNQNGKL---------------------------WRVVRACAVAALAPSQLVKVVRPAAKFEKTTEGAKEIEAHARELKFFI-----------RAVRNLEQKDNSLSEERVFIHPSSANFSAGDYSCPWLVFHSMVRTSKPFLRDVTECNSYSLLLFGGPLEVK------------------ASKSVVSIDGWVQLSANARIGALMGGLRRKVDELLSQKVRDPSLEIASTEEMRLIIKLITRDG 1437
[Close]
BLAST of NO27G01790 vs. NCBI_GenBank
Match: EWM20317.1 (atp-dependent rna [Nannochloropsis gaditana])

HSP 1 Score: 221.5 bits (563), Expect = 1.300e-53
Identity = 195/401 (48.63%), Postives = 230/401 (57.36%), Query Frame = 0 
Query:    1 MGKKGNSSSPSSAXXXXXXXGXXAAGTGVDNKKKARGHRQRGAGAVMVDKGPVERNGVTLQTWQRLPSTLLQEHCQREKRPKANYYPAKIRPGDKGCKMQVVLPDPKKQREKDLRFEPTPPPSSIATSSPSSSLASL-------------------------------------------------------------------ASSLVSGEGRDVSSAPQSVVLKSAFRFTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHRIMMSTRMRRICEDALGIKHMQV--AGEDEGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTRILHALLPKGFTARQILHAIRVLRKNAHSAAWGGEEETMEYLLLHLREEELPSHYDPRGRNLDVVLPTAK 333
            MGKK N+SS SS            A TG + KKKARGHRQRGAGAVMVDK PV ++GV LQ+WQRLPS LLQEHCQREKRP+ +Y    +  GDKG KMQV+LPDP K R+K LRF PT   +  + +  +++L +L                                                                                 AP+ +VL SA R+T    XXXXXXXXXXXXXXXXXXXXXXXXXX  +RIMMS++MRRICEDALGI+H++V         XXXXXXXXXXXXXXXXX                  IL AL PKGFT RQILHA+ VLRK+A+  AWGG EE ++YLLLHL+EE LP+ +DPRGRN DVVLPT +
Sbjct:   35 MGKKNNASSSSS--KPTSGPNSIEAQTGGETKKKARGHRQRGAGAVMVDKAPVVKDGVMLQSWQRLPSILLQEHCQREKRPRPSYGQVSLLAGDKGIKMQVILPDP-KHRDKSLRFLPTVSSADASQAKENAALLALLHLTPTLPLERKLPEPYKTTWTNSTRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFQAPEPMVLASALRYTSLKEXXXXXXXXXXXXXXXXXXXXXXXXXXEDYRIMMSSKMRRICEDALGIQHIEVDXXXXXXXXXXXXXXXXXXXXXXXXXGRKADLQSKRERQVEDASILKALRPKGFTDRQILHAVHVLRKSANGGAWGGPEEVVDYLLLHLKEEALPAQFDPRGRNFDVVLPTIR 432
[Close]
BLAST of NO27G01790 vs. NCBI_GenBank
Match: GAX25183.1 (ATP-dependent RNA helicase DHX36 [Fistulifera solaris])

HSP 1 Score: 217.2 bits (552), Expect = 2.500e-52
Identity = 144/418 (34.45%), Postives = 205/418 (49.04%), Query Frame = 0 
Query:  685 FLSLLLDPPEAATIRAALSTLEEIQAVVPKGDELRITPLGRHLAALPCPVRLGKMLIYGALLGVLTPALAIAACM-LVRNPLLSLQFREDRQEVET-----ARVRRLGIGGSFGKSDHLLLARAVEAY-LKEGGREGRRALCQEVGLSFERMCEVQTLISQLGRDMSSLGFPPAPSSLSSTRVERGGREGGSDGARALLATMDEKGGRAYWRLVKAAVGVGLYPN-VVKVVRPPFRYAKVAGGAVQVEAHARELSFYVFNKHKEPPVEPLASFYFPHKDKEDRVYIHPCSINYSQGAYTVPWLVFSDVMRTTRAFVRDCTEVSPYALLLAANTLRMQHDXXXXXXXXXXXXXXXXXXXXXXXXXGWIRFAAVGRIGALVNALKRKVDELLEEKVRNPELELGDSPAARALVKLIATDG 1095
            F   L+DPP   +I AA STL ++ AV      L++TPLG HLA +P P  +GKMLI G +LG    +LA+AA M L R+P + +      +E+ +         R  +    G SDH +LA     +   E     RR++C  +GLSF  M ++  L+ QL   + SLGF P                           T D       WR+++A     L P+ +VKVVRP  +Y K   GA +VEA AREL F++                   K+ E+RV+IHP S N+S G Y  PWLVF  ++RT++ F+RD TE + Y+LLL    L ++                           GW++ +A  RIGAL+  L+RKVD+LL +KVR+P  E+  +   R ++KLI  DG
Sbjct: 1079 FFRSLIDPPSPESILAAESTLIQLSAVERVNTTLQLTPLGLHLAGIPAPPMIGKMLIMGCILGCREASLAMAAGMSLGRSPFIRIDSNPKTKELSSKFNSDVLKARTDLIEFVGGSDHAVLAAVYSQWKAPENDSSRRRSVCDALGLSFSVMRDMDLLVKQLDSALVSLGFSP---------------------------TADSNQNGKLWRVIRACAVAALAPSQLVKVVRPAAKYEKTTEGAKEVEAQARELKFFIRTVRD-----------LEQKESEERVFIHPSSANFSVGDYNCPWLVFHSMVRTSKPFLRDVTECNSYSLLLFGGPLEVK------------------ASKNVVSIDGWVQLSANSRIGALMGGLRRKVDQLLSQKVRDPSFEIASTEEMRLIIKLIIRDG 1440
[Close]
BLAST of NO27G01790 vs. NCBI_GenBank
Match: CCA19937.1 (ATPdependent RNA helicase putative [Albugo laibachii Nc14])

HSP 1 Score: 206.8 bits (525), Expect = 3.300e-49
Identity = 132/418 (31.58%), Postives = 214/418 (51.20%), Query Frame = 0 
Query:  685 FLSLLLDPPEAATIRAALSTLEEIQAV-----VPKGDELRITPLGRHLAALPCPVRLGKMLIYGALLGVLTPALAIAACMLVRNPLLSLQFREDRQEVETARVRRLGIGGSFGKSDHLLLARAVEAY--LKEGGREGRRALCQEVGLSFERMCEVQTLISQLGRDMSSLGFPPAPSSLSSTRVERGGREGGSDGARALLATMDEKGGRAYWRLVKAAVGVGLYPNVVKVVRPPFRYAKVAGGAVQVEAHARELSFYVFNKHKEPPVEPLASFYFPHKDKEDRVYIHPCSINYSQGAYTVPWLVFSDVMRTTRAFVRDCTEVSPYALLLAANTLRMQHDXXXXXXXXXXXXXXXXXXXXXXXXXGWIRFAAVGRIGALVNALKRKVDELLEEKVRNPELELGDSPAARALVKLIATDGM 1096
            FL   ++PP++  I +A+  L EI A+         D + +TPLG+HL  LP   R+GK LIYG++LG ++ ++ IAAC+  ++P  S       QE      R   +GG   KSDHLL    VE Y  L +  +  +R+ C+E  +SFE +  + +L  Q    + ++GF    S     R               + AT+         R++KAA+  GLY NVV+V  P  +Y + A G +  E  A ++ ++V  K  +           P + + +RVY+HP S N+ Q  +  PW++++++++T+R+F RD T ++P+ALLL    L +QH                           WI FAAV RIG L+ A+++++D  LE+K+ NP +E+GD+    A++ L+ T+GM
Sbjct: 1039 FLMNAIEPPQSEAIDSAIGELIEIGALDLSETSQDSDTVELTPLGKHLGMLPLDARIGKFLIYGSILGCVSASVTIAACISSKSPFCSSAGNPSLQEKHQELKR--SVGGDNWKSDHLLHRMVVERYLGLSKATQSQKRSFCREYAVSFEALEAITSLRQQYLMHLETIGF---YSQKDRHRYN-------------INATVP--------RIIKAALCAGLYGNVVQVYYPRKKYTQTAHGVLTEEPEANQVRYFVSTKRHQHTQ--------PDQKQLERVYLHPSSCNFKQSNFESPWILYTELIQTSRSFARDTTMINPFALLLFGGKLDVQHS------------------TNVLVIDDWIHFAAVARIGVLIKAIRKQLDSYLEKKLANPSIEIGDTDLLHAIMHLLKTEGM 1404

HSP 2 Score: 61.2 bits (147), Expect = 2.300e-5
Identity = 29/51 (56.86%), Postives = 39/51 (76.47%), Query Frame = 0 
Query:  610 SSNRLVLVCGATGCGKTTQIPQFILEDAEEKGIGSTVKIVVSQPRRIAAIG 661
            ++N++V+V G TGCGK+TQIPQFILE+         ++IV +QPRRIAAIG
Sbjct:  617 NANQVVMVSGQTGCGKSTQIPQFILENCLANRKDEGIEIVCTQPRRIAAIG 667
[Close]
BLAST of NO27G01790 vs. NCBI_GenBank
Match: XP_024581742.1 (atp-dependent rna [Plasmopara halstedii] >CEG45373.1 atp-dependent rna [Plasmopara halstedii])

HSP 1 Score: 206.8 bits (525), Expect = 3.300e-49
Identity = 132/421 (31.35%), Postives = 215/421 (51.07%), Query Frame = 0 
Query:  685 FLSLLLDPPEAATIRAALSTLEEIQAVVPKGDELR----------ITPLGRHLAALPCPVRLGKMLIYGALLGVLTPALAIAACMLVRNPLLSLQFREDRQEVETARVRRLGIGGSFGKSDHLLLARAVEAYLKEGGREGRRALCQEVGLSFERMCEVQTLISQLGRDMSSLGFPPAPSSLSSTRVERGGREGGSDGARALLATMDEKGGRAYWRLVKAAVGVGLYPNVVKVVRPPFRYAKVAGGAVQVEAHARELSFYVFNKHKEPPVEPLASFYFPHKDKEDRVYIHPCSINYSQGAYTVPWLVFSDVMRTTRAFVRDCTEVSPYALLLAANTLRMQHDXXXXXXXXXXXXXXXXXXXXXXXXXGWIRFAAVGRIGALVNALKRKVDELLEEKVRNPELELGDSPAARALVKLIATDGM 1096
            FL+  ++PP   +I +A+  L +I A    G  L+          +TPLG+HLA LP   R+GK L+YG++L  + P   IA+C+  RNP   +    D Q        +  +GGS+ KSDHLLL + VE Y    G++ +R  C+E GLS++ M  +  L  Q  + + ++GF                     + +RA+L   +        R++KAA+  GLY NVV+VV P  +Y + A G V+ + +A+++ +YV +                  ++ +RV++HP S N+SQ  Y  PWL+++++++T++ FVR+CT V+ YALLL    L + H+                         GWI F AV RIG L+  +++ +D LL +K+ NP +E+  S    A+  L+ ++GM
Sbjct: 1062 FLANAIEPPNNDSIDSAIRELVDIAAFEMVGKNLKNESNNDLQVVLTPLGKHLAMLPLDARIGKFLVYGSILRCVEPVAIIASCISSRNPF--VMSTSDPQIRVNQNALKKELGGSW-KSDHLLLWKLVERYAPLRGQKMKRDFCREAGLSYDTMESIVELKHQYLQQLDNIGF--------------------YESSRAVLYNANANAP----RMIKAALCAGLYANVVQVVYPEQKYFQAAHGVVEEDHNAKQIRYYVRS--------------VTEANQRERVFLHPSSCNFSQNNYDSPWLLYTELVQTSKIFVRECTMVNTYALLLFGGHLEVTHE------------------KNLLTLDGWIHFNAVARIGVLIKKIRQHLDRLLLDKIANPSIEIAQSELVTAISHLLTSEGM 1423

HSP 2 Score: 81.6 bits (200), Expect = 1.600e-11
Identity = 176/720 (24.44%), Postives = 255/720 (35.42%), Query Frame = 0 
Query:   32 KKKARGHRQRGAGAVMVDKGPVERNGVTLQTWQRLPSTLLQEHCQREKRPKANYYPAKIRPGDKGCKMQVVLPDPKKQREKDLRFEP-------------------------------TPPP--------SSIATSSPSSSLASLASSL---------------VSGEGRDV------------SSAPQSVVLKSAFRFTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHRIMMSTRMRRICEDALGIKHMQVAGEDEGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTRILHALLPKGFTARQILHAIR---VLRKNAHSAAWGGEEETMEYLLLHLREEELPSHYDPRGRNLDVVLPTAKLQALSLTTEKRHPFGLEEEDWAALCLLLSGKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSFPLSSNPALEEELEN----LRAIYGDTTVTIPSFPPXXXXXLLLSGALPPGHVLKVFLR-PSLYP-SLPAFALL-EGPQANVRVQQELAACSQRM------AGHAMLFELLLAATEALDNREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEGNTHEARNRNGTRPSPSPSFFSYARNGFWNPASRXXXXXXHWTSSCEGCFLR---DGAREKD------SSNRLVLVCGATGCGKTTQIPQFILEDAEEKGIGSTVKIVVSQPRRIAAIG 661
            + +  GHRQRGAG V V KG   R G+  + WQR P  LLQ+ CQ +KR  A Y  AK +   K  +M+ VLPD  K   KDL F P                                P P        SS  T   + +    A ++               V  E  D+             +  + ++L    +F              XXXXXXXXXXXXXXXX    ++MMS + R + E+ L         ++ GE                                 T+ L A+   GFT+ QI  A++    L  +  S          ++L L++ E ELP  ++P G  LDVVL T+ +   S+  ++   FG +  D  A+      +                                          +S   AL E  +N    L  IY +     P          LL   +     L +FL  PS YP  LP  AL  + PQ    +   LAAC + +       G  M++++ +A    + ++                                          H+  ++     S S      A         +         S  +    R     ++E+         N++VL+CGATGCGKTTQIPQ+IL++   +G G    IV +QPRRIAAIG
Sbjct:    3 RSRQPGHRQRGAGTVSVSKGDAVRQGILCKEWQRTPMQLLQDFCQSKKRRNAVYTRAKSKDAAK-FRMRCVLPD-AKDSSKDLNFRPEQEFDTQDDAKHCAALLALKHVEPLQPYERKLPDPYRDLWLALSSQTTLKENGNAKGAAIAVKREEQPVRLEKKMTTVDSEDVDLWGEATEEKKLAKKANDKKIILTMDRKFASYKEFETAKQAQTXXXXXXXXXXXXXXXXNMPKQVMMSAQCREMIENVL---------KNMGE--------LPKTSRNKELHEDTVEQRNFFREMATKKLKAI---GFTSMQIQSAMQNLCDLGLDGRSTEDVRMIAIFDWLCLNVPEGELPKKFNPEGTQLDVVLSTSDIPRTSVLVQRLMKFGYDRRDAVAVASEFLQENACMCEEEVKTPSMLTLFTLLSKLFPYVKRYFSLKEVDTVIEMSD--ALLEHRQNEIFALETIYEEKLRITPL--DDNSSSQLLEFEMTDALRLYIFLSGPSKYPFELPLVALTSKEPQHQPHL---LAACGEALKKCVSTIGEPMIYDIYVAIDTYMHDQIGLTISPARIQLIRTNVIEDETSAEPLQAEQDRSKSRKFKRGHDRNDKRKAHSSSSKCLDVEATRRISEKLLQLRKDKDSQQSYQQMLAARAKLPASKEESQVIKCVKENQVVLICGATGCGKTTQIPQYILDEYINRGAGGECNIVCTQPRRIAAIG 693
[Close]
BLAST of NO27G01790 vs. NCBI_GenBank
Match: CBN75205.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 206.5 bits (524), Expect = 4.400e-49
Identity = 144/412 (34.95%), Postives = 208/412 (50.49%), Query Frame = 0 
Query:  686 LSLLLDPPEAATIRAALSTLEEIQAVVPKGDELRITPLGRHLAALPCPVRLGKMLIYGALLGVLTPALAIAACMLVRNPLLSLQFREDRQEVETARVRRLGIGGSFGKSDHLLLARAVEAYLKEGGREGRRALCQEVGLSFERMCEVQTLISQLGRDMSSLGFPPAPSSLSSTRVERGGREGGSDGARALLATMDEKGGRAYWRLVKAAVGVGLYPNVVKVVRPPFRYAKVAG-GAVQVEAHARELSFYVFNKHKEPPVEPLASFYFPHKDKEDRVYIHPCSINYSQGAYTVPWLVFSDVMRTTRAFVRDCTEVSPYALLLAANTLRMQHDXXXXXXXXXXXXXXXXXXXXXXXXXGWIRFAAVGRIGALVNALKRKVDELLEEKVRNPELELGDSPAARALVKLIATDGMG 1097
            L+  LDPP+   ++ A+  L +++A+   G+   +TPLG HLAALPCPV++GKMLIYGA+LG L+P L+IAA +  R+P LS    E R+ ++ A  +          S+H LLA                                          ++ +GF      ++S+R     R   +  AR+             WR VKAAV  GLYP V++V RP  ++  + G GAV V   A+E  F  F + + P   P          K+DRV+IHP SIN+    ++ PWLV+ + + T+R FVRDCTEVSPYALLL    + +Q                            W+RF AVGRI ALVN L++++D +L EK+++P L++  S  + ALV+L+ TDGMG
Sbjct: 1197 LARALDPPDPKAVQDAVDVLTDLKAL---GEGAELTPLGWHLAALPCPVQVGKMLIYGAVLGCLSPLLSIAAGLSCRSPFLSSGDPEKREAIDAA--KXXXXXXXXXXSNHTLLAA-----------------------------------------LAGIGF------IASSRAAFDPRASVNAQARS-------------WRAVKAAVCAGLYPRVMRVRRPMEKFVDLVGVGAVPVRHTAKEFQF--FTRSRGPDSGP---------GKDDRVFIHPSSINFRTNDWSCPWLVYHERVHTSRVFVRDCTEVSPYALLLFGGQVAVQ------------------AGLGRIAVDEWVRFEAVGRIAALVNRLRQRLDGMLWEKIQDPRLDVAGSKLSEALVELLQTDGMG 1514

HSP 2 Score: 86.7 bits (213), Expect = 5.000e-13
Identity = 54/120 (45.00%), Postives = 77/120 (64.17%), Query Frame = 0 
Query:   24 AAGTGVD-----NKKKARGHRQRGAGAVMVDKGPVERNGVTLQTWQRLPSTLLQEHCQREKRPKANYYPAKIRPGDKGC-KMQVVLPDPKKQREKDLRFEPTPPPSSIATSSPSSSLASL 138
            AA  G+D      K KARGHRQRGAG VMVD+G VER+GVT+ +WQRLPS L+Q+H  R +  + +++P  ++P + G  + +VVLPD +K   KD+ F PT    + A     ++L +L
Sbjct:   20 AADPGIDIVFDKPKPKARGHRQRGAGTVMVDRGGVERDGVTVLSWQRLPSQLVQQHADRLQMKRPHFHP--VQPSEPGLFRFRVVLPD-RKNNAKDMAFCPTESFHTAAQGKEHAALLAL 136
[Close]
BLAST of NO27G01790 vs. NCBI_GenBank
Match: CCI39471.1 (unnamed protein product [Albugo candida])

HSP 1 Score: 206.5 bits (524), Expect = 4.400e-49
Identity = 133/418 (31.82%), Postives = 210/418 (50.24%), Query Frame = 0 
Query:  685 FLSLLLDPPEAATIRAALSTLEEIQAV-----VPKGDELRITPLGRHLAALPCPVRLGKMLIYGALLGVLTPALAIAACMLVRNPLLSLQFREDRQEVETARVRRLGIGGSFGKSDHLLLARAVEAY--LKEGGREGRRALCQEVGLSFERMCEVQTLISQLGRDMSSLGFPPAPSSLSSTRVERGGREGGSDGARALLATMDEKGGRAYWRLVKAAVGVGLYPNVVKVVRPPFRYAKVAGGAVQVEAHARELSFYVFNKHKEPPVEPLASFYFPHKDKEDRVYIHPCSINYSQGAYTVPWLVFSDVMRTTRAFVRDCTEVSPYALLLAANTLRMQHDXXXXXXXXXXXXXXXXXXXXXXXXXGWIRFAAVGRIGALVNALKRKVDELLEEKVRNPELELGDSPAARALVKLIATDGM 1096
            FL  +++PP    I AA+S L EI A+         D + +TPLG+HL  LP   R+GK LIYG++LG ++ ++ IAAC+  ++P  S       QE      R   +GG   KSDHLL    +E +  L +  +  +R+ C+E  +SFE +  +  L  Q    + ++GF                     D  R  +         +  R++KAA+  GLY NVV+V  P  +Y + A G +  E  A ++ ++V  K  +           P + + +RVY+HP S N+ Q  +  PW++++++++T+R F RD T ++PYALLL    L +QH                           WI FAAV RIG L+ A+++++D  LE+KV NP LE+GD+    A++ L+ T+GM
Sbjct: 1050 FLKNVIEPPLCQAIDAAISELIEIGAMNLSETSQDSDSMELTPLGKHLGMLPLDARIGKFLIYGSVLGCVSASVTIAACISSKSPFCSTAGNPSLQEKHQELKR--SVGGDNWKSDHLLHWMVIERFLTLSKATQTQKRSFCREYAVSFEALEAITDLRQQYLMHLETIGF-----------------YSQKDRHRYNI-------NASVPRIIKAALCAGLYGNVVQVFYPRKKYTQTAHGVLTEEPEANQVRYFVSTKRHQHTQ--------PDEKQLERVYLHPSSCNFKQSNFESPWILYTELIQTSRLFARDTTMINPYALLLFGGKLEVQHS------------------KNILVIDNWIHFAAVARIGVLIKAIRKQLDAYLEKKVANPSLEIGDTDLLHAIMHLLKTEGM 1415

HSP 2 Score: 60.1 bits (144), Expect = 5.000e-5
Identity = 28/49 (57.14%), Postives = 37/49 (75.51%), Query Frame = 0 
Query:  612 NRLVLVCGATGCGKTTQIPQFILEDAEEKGIGSTVKIVVSQPRRIAAIG 661
            N++V+V G TGCGK+TQIPQFILE+         ++IV +QPRRIAA+G
Sbjct:  630 NQVVMVSGQTGCGKSTQIPQFILENCIANRKDEGIEIVCTQPRRIAAVG 678

HSP 3 Score: 59.3 bits (142), Expect = 8.600e-5
Identity = 30/74 (40.54%), Postives = 45/74 (60.81%), Query Frame = 0 
Query:   34 KARGHRQRGAGAVMVDKGPVERNGVTLQTWQRLPSTLLQEHCQREKRPKANYYPAKIRPGDKGCKMQVVLPDPK 108
            + +GH+QRGAGAV V +GP+ + GV  + WQR P  +L E+CQ ++R    Y  AK    +   +M+ +L D K
Sbjct:    3 RQKGHKQRGAGAVTVSRGPLLKQGVICKEWQRTPMQILSEYCQSKQRKLPKYIEAK-SSNESKFRMRCLLLDGK 75
[Close]
BLAST of NO27G01790 vs. NCBI_GenBank
Match: ETP05313.1 (hypothetical protein F441_18049, partial [Phytophthora parasitica CJ01A1])

HSP 1 Score: 204.9 bits (520), Expect = 1.300e-48
Identity = 135/427 (31.62%), Postives = 220/427 (51.52%), Query Frame = 0 
Query:  685 FLSLLLDPPEAATIRAALSTLEEIQAVVPKG---------------DELRITPLGRHLAALPCPVRLGKMLIYGALLGVLTPALAIAACMLVRNP-LLSLQFREDRQEVETARVRRLGIGGSFGKSDHLLLARAVEAYLKEGGREGRRALCQEVGLSFERMCEVQTLISQLGRDMSSLGFPPAPSSLSSTRVERGGREGGSDGARALLATMDEKGGRAYWRLVKAAVGVGLYPNVVKVVRPPFRYAKVAGGAVQVEAHARELSFYVFNKHKEPPVEPLASFYFPHKDKEDRVYIHPCSINYSQGAYTVPWLVFSDVMRTTRAFVRDCTEVSPYALLLAANTLRMQHDXXXXXXXXXXXXXXXXXXXXXXXXXGWIRFAAVGRIGALVNALKRKVDELLEEKVRNPELELGDSPAARALVKLIATDGM 1096
            FLS  ++PP    I AA+  L +I A    G               +E+ +TPLG HLA LP   R+GK L+YG++L  + P   IAAC+  RNP L+S+   E R + +  +     +GG++ KSDHLLL + +E Y    G++ +R  C+++GLS++ M  +  L  Q  + + ++GF                 E  SDG   L A  D        R++KAA+  GLY NV +VV P  +Y + A G V+ + +A+++ ++V +                   + +RV++HP S N+SQ  Y  PWL+++++++T++ FVR+ T V+PYALLL    L + H+                         G+IRF+AV RIG L+ ++++ +D LL EK+ +P + +  S    A+  L+ ++GM
Sbjct: 1074 FLSKAIEPPNEDAIDAAIQELVDIAAFRTVGESPKSKVRGNRDIHDEEVALTPLGNHLAMLPLDARIGKFLVYGSILRCIEPVAIIAACISSRNPFLMSMSDPEMRAKQDALKKE---LGGNW-KSDHLLLWKLIERYAPLRGQKMKRGFCRDIGLSYDTMESILDLKQQYLQQLDNIGF----------------YESSSDG--HLNANSDAP------RIIKAALCAGLYANVAQVVYPEQKYFQAAHGVVEEDHNAKQIRYFVRSA--------------TEAGQRERVFLHPSSCNFSQNNYDSPWLLYTELVQTSKIFVRESTMVNPYALLLFGGRLEVVHE------------------KNLLTLGGFIRFSAVARIGVLIKSIRQHLDRLLMEKIADPGVNIAQSELVTAISHLLKSEGM 1440

HSP 2 Score: 74.3 bits (181), Expect = 2.600e-9
Identity = 159/728 (21.84%), Postives = 242/728 (33.24%), Query Frame = 0 
Query:   32 KKKARGHRQRGAGAVMVDKGPVERNGVTLQTWQRLPSTLLQEHCQREKRPKANYYPAKIRPGDKGCKMQVVLPDPKKQREKDLRFEPTPPPSSIATSSPSSSLAS----------------------LASSLVSGE------------------------------------GRDV------SSAPQSVVLKSAFRFTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHRIMMSTRMRRICEDALGIKHMQVAGEDEGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTRILHALLPKGFTARQILHAIRVLRKNAHSAAWGGEEETM----EYLLLHLREEELPSHYDPRGRNLDVVLPTAKLQALSLTT---EKRHPFGLEEEDWAALCLLLSGKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSFPLSSNPALE----------EELENLRAIYGDTTVTIPSFPPXXXXXLL---LSGALPPGHVLKVFL-RPSLYP-SLPAFALL-----EGPQANVRVQQELAACSQRMAGHAMLFELLLAATEALDNREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXV----EGNTHEARNRNGTRPSPSPSFFSYARNGFWNPASRXXXXXXHWTSSCEGCF--LRDGAR--EKDSSNRLVLVCGATGCGKTTQIPQFILEDAEEKGIGSTVKIVVSQPRRIAAIG 661
            +++  GHRQRGAG V V KG   R GV  + WQR P  LL E CQ +KR  A Y  A+ +   K  +M+ VLPD  K   KDL F P     +   +   ++L +                      LA    +G                                     GRD         + + + L    +F                                  ++MMS + R + E  L           +G+                                 T+ L A+   GFT  QI  A++   +       G E+  M    ++L L++ E +LP  ++P G  LDVVL + +  A   TT   ++   FG +  D   +                                               F L  N A+E          +E+  L AIY D  + I S        LL   ++ AL     L +FL   S YP  LP  AL        P       + L +C   M G  ML+++ +A      +++                                         + N +    +N  +   S +    +     +  ++          +       +++ A+  E   +N++VL+CGATGCGKTTQIPQFIL++   +G G    I+ +QPRRIAAIG
Sbjct:   10 RQRQPGHRQRGAGTVSVSKGDTVRQGVLCKEWQRTPMQLLHEFCQSKKRRNAFYARARSKDAAK-FRMRCVLPD-DKDSSKDLSFCPEQEFETQDEAKHCAALLALKHVEPLRPHERKLPDPYRDLWLALGSQNGPADKGSXXXXXXXXXXXXXXXXXXXXXXXXXXGMDLWGRDAEEEVVEKKSDKPMTLTMDRKFASHKEFETAKLARTQERNKKLRARENRERANLPKQVMMSAQCRELIEGILRQLGEMQKKSSKGQ----------NLMDKESDLEQKKLEEEEFQKKATQRLKAI---GFTPAQINGALQSCSRGLKVDDEGAEDAHMTAIFDWLCLNIPEGDLPKKFNPEGTQLDVVLSSTQTDASPRTTVLVQRLMKFGYDRHDAVTVA---------NEFVQEHSGMSDEDLKTPSVATLFAILEKLSPHVKRHFSLEENGAIEATEELLDQRQDEIFALEAIY-DEKLKIMSLEDGSKAQLLEFEVTDALR----LHIFLSSTSTYPFELPLLALTSTEAKHQPHLLAACGEALKSCVHSM-GEPMLYDIYVAIDTYFQDKKRLSSSPPRIQLLKKLAAVKENAVNRSQTPSKTTPNKAKSRKKNNGNAGMYKNQPKRVDSEAVRRMSEKLLQSRKAKDSQQNFQQMLAARAKLPAVKEEAQVIECVQNNQVVLICGATGCGKTTQIPQFILDEHINRGAGGECNIICTQPRRIAAIG 707
[Close]
BLAST of NO27G01790 vs. NCBI_GenBank
Match: ETI35482.1 (hypothetical protein F443_18185, partial [Phytophthora parasitica P1569] >ETM35627.1 hypothetical protein L914_17496, partial [Phytophthora parasitica])

HSP 1 Score: 203.8 bits (517), Expect = 2.800e-48
Identity = 135/427 (31.62%), Postives = 219/427 (51.29%), Query Frame = 0 
Query:  685 FLSLLLDPPEAATIRAALSTLEEIQAVVPKG---------------DELRITPLGRHLAALPCPVRLGKMLIYGALLGVLTPALAIAACMLVRNP-LLSLQFREDRQEVETARVRRLGIGGSFGKSDHLLLARAVEAYLKEGGREGRRALCQEVGLSFERMCEVQTLISQLGRDMSSLGFPPAPSSLSSTRVERGGREGGSDGARALLATMDEKGGRAYWRLVKAAVGVGLYPNVVKVVRPPFRYAKVAGGAVQVEAHARELSFYVFNKHKEPPVEPLASFYFPHKDKEDRVYIHPCSINYSQGAYTVPWLVFSDVMRTTRAFVRDCTEVSPYALLLAANTLRMQHDXXXXXXXXXXXXXXXXXXXXXXXXXGWIRFAAVGRIGALVNALKRKVDELLEEKVRNPELELGDSPAARALVKLIATDGM 1096
            FLS  ++PP    I AA+  L +I A    G               +E+ +TPLG HLA LP   R+GK L+YG++L  + P   IAAC+  RNP L+S+   E R + +  +     +GG++ KSDHLLL + +E Y    G++ +R  C+++GLS++ M  +  L  Q  + + ++GF                 E  SDG   L A  D        R++KAA+  GLY NV +VV P  +Y + A G V+ + +A+++ ++V +                   + +RV++HP S N+SQ  Y  PWL+++++++T++ FVR+ T V+PYALLL    L + H+                         G+IRF AV RIG L+ ++++ +D LL EK+ +P + +  S    A+  L+ ++GM
Sbjct: 1074 FLSKAIEPPNEDAIDAAIQELVDIAAFRTVGESPKSKLRGNRDIHDEEVALTPLGNHLAMLPLDARIGKFLVYGSILRCIEPVAIIAACISSRNPFLMSMSDPEMRAKQDALKKE---LGGNW-KSDHLLLWKLIERYAPLRGQKMKRGFCRDIGLSYDTMESILDLKQQYLQQLDNIGF----------------YESSSDG--HLNANSDAP------RIIKAALCAGLYANVAQVVYPEQKYFQAAHGVVEEDHNAKQIRYFVRSA--------------TEAGQRERVFLHPSSCNFSQNNYDSPWLLYTELVQTSKIFVRESTMVNPYALLLFGGRLEVVHE------------------KNLLTLDGFIRFNAVARIGVLIKSIRQHLDRLLMEKIADPGVNIAQSELVTAISHLLKSEGM 1440

HSP 2 Score: 73.2 bits (178), Expect = 5.800e-9
Identity = 169/752 (22.47%), Postives = 249/752 (33.11%), Query Frame = 0 
Query:   32 KKKARGHRQRGAGAVMVDKGPVERNGVTLQTWQRLPSTLLQEHCQREKRPKANYYPAKIRPGDKGCKMQVVLPDPKKQREKDLRFEPTPPPSSIATSSPSSSLAS----------------------LASSLVSG-------------------------------EGRDV--SSAPQSVVLKSA---------FRFTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHRIMMSTRMRRICEDALGIKHMQVAGEDEGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTRILHALLPKGFTARQILHAIRVLRKNAHSAAWGGEEETM----EYLLLHLREEELPSHYDPRGRNLDVVLPTAKLQALSLTT---EKRHPFGLEEEDWAALCLLLSGKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSFPLSSNPALE----------EELENLRAIYGDTTVTIPSFPPXXXXXLL---LSGALPPGHVLKVFL-RPSLYP-SLPAFALL-----EGPQANVRVQQELAACSQRMAGHAMLFELLLAATEALDNREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEGNTHEARNRNGTRPSPSPSFFSYARNG----FWNPASRXXXXXXHWTSSCEGCFLRDGAREKDS----------------------------SNRLVLVCGATGCGKTTQIPQFILEDAEEKGIGSTVKIVVSQPRRIAAIG 661
            +++  GHRQRGAG V V KG   R GV  + WQR P  LL E CQ +KR  A Y  A+ +   K  +M+ VLPD  K   KDL F P     +   +   ++L +                      LA    +G                                G D+    A + VV K +          +F                                  ++MMS + R + E  L           +G+                                 T+ L A+   GFT  QI  A++   +       G E+  M    ++L L++ E +LP  ++P G  LDVVL + +  A   TT   ++   FG +  D   +                                               F L  N A+E          +E+  L AIY D  + I S        LL   ++ AL     L +FL   S YP  LP  AL        P       + L +C   M G  ML+++ +A      +++                                    V+ N    R++  ++ +P+ +     +NG    + N   R         S      L    + KDS                            +N++VL+CGATGCGKTTQIPQFIL++   +G G    I+ +QPRRIAAIG
Sbjct:   10 RQRQPGHRQRGAGTVSVSKGDTVRQGVLCKEWQRTPMQLLHEFCQSKKRRNAFYARARSKDAAK-FRMRCVLPD-DKDSSKDLSFCPEQEFETQDEAKHCAALLALKHVEPLRPHERKLPDPYRDLWLALGSQNGPADKGSXXXXXXXXXXXXXXXXXXXXXXXXXXGMDLWGGDAEEEVVEKKSDKPMTLTMDRKFASHKEFETAKLARTQERNKKLRARENRERANLPKQVMMSAQCRELIEGILRQLGEMQKKSSKGQ----------ILMDEESDLEQKKLEEEEFQKEATQRLKAI---GFTPAQINGALQSCSRGLKVDDEGTEDAHMTAIFDWLCLNIPEGDLPKKFNPEGTQLDVVLSSTQTDASPRTTVLVQRLMKFGYDRHDAVTVA---------NEFVQEHSGMSDEDLKTPSVATLFAILEKLSPHVKRHFSLEENGAIEATEELLDQRQDEIFALEAIY-DEKLKIMSLEDGSKAQLLEFEVTDALR----LHIFLSSTSKYPFELPLLALTSTEAKHQPHLLAACGEALKSCVHSM-GEPMLYDIYVAIDTYFQDKK-------------------RLSSSPPRIQLLKKLAAVKENAVN-RSQTPSKTTPNKAKSRKKKNGNAGMYKNQPKRVDSEAVRRMSE----KLLQSRKAKDSQQNFQQMLAARAKLPAGKEEAQVIECVQNNQVVLICGATGCGKTTQIPQFILDEHINRGAGGECNIICTQPRRIAAIG 707
[Close]
BLAST of NO27G01790 vs. NCBI_GenBank
Match: ETK75726.1 (hypothetical protein L915_17706, partial [Phytophthora parasitica])

HSP 1 Score: 203.8 bits (517), Expect = 2.800e-48
Identity = 135/427 (31.62%), Postives = 219/427 (51.29%), Query Frame = 0 
Query:  685 FLSLLLDPPEAATIRAALSTLEEIQAVVPKG---------------DELRITPLGRHLAALPCPVRLGKMLIYGALLGVLTPALAIAACMLVRNP-LLSLQFREDRQEVETARVRRLGIGGSFGKSDHLLLARAVEAYLKEGGREGRRALCQEVGLSFERMCEVQTLISQLGRDMSSLGFPPAPSSLSSTRVERGGREGGSDGARALLATMDEKGGRAYWRLVKAAVGVGLYPNVVKVVRPPFRYAKVAGGAVQVEAHARELSFYVFNKHKEPPVEPLASFYFPHKDKEDRVYIHPCSINYSQGAYTVPWLVFSDVMRTTRAFVRDCTEVSPYALLLAANTLRMQHDXXXXXXXXXXXXXXXXXXXXXXXXXGWIRFAAVGRIGALVNALKRKVDELLEEKVRNPELELGDSPAARALVKLIATDGM 1096
            FLS  ++PP    I AA+  L +I A    G               +E+ +TPLG HLA LP   R+GK L+YG++L  + P   IAAC+  RNP L+S+   E R + +  +     +GG++ KSDHLLL + +E Y    G++ +R  C+++GLS++ M  +  L  Q  + + ++GF                 E  SDG   L A  D        R++KAA+  GLY NV +VV P  +Y + A G V+ + +A+++ ++V +                   + +RV++HP S N+SQ  Y  PWL+++++++T++ FVR+ T V+PYALLL    L + H+                         G+IRF AV RIG L+ ++++ +D LL EK+ +P + +  S    A+  L+ ++GM
Sbjct: 1074 FLSKAIEPPNEDAIDAAIQELVDIAAFRTVGESPKSKVRGNRDIHDEEVALTPLGNHLAMLPLDARIGKFLVYGSILRCIEPVAIIAACISSRNPFLMSMSDPEMRAKQDALKKE---LGGNW-KSDHLLLWKLIERYAPLRGQKMKRGFCRDIGLSYDTMESILDLKQQYLQQLDNIGF----------------YESSSDG--HLNANSDAP------RIIKAALCAGLYANVAQVVYPEQKYFQAAHGVVEEDHNAKQIRYFVRSA--------------TEAGQRERVFLHPSSCNFSQNNYDSPWLLYTELVQTSKIFVRESTMVNPYALLLFGGRLEVVHE------------------KNLLTLGGFIRFNAVARIGVLIKSIRQHLDRLLMEKIADPGVNIAQSELVTAISHLLKSEGM 1440

HSP 2 Score: 74.3 bits (181), Expect = 2.600e-9
Identity = 167/752 (22.21%), Postives = 247/752 (32.85%), Query Frame = 0 
Query:   32 KKKARGHRQRGAGAVMVDKGPVERNGVTLQTWQRLPSTLLQEHCQREKRPKANYYPAKIRPGDKGCKMQVVLPDPKKQREKDLRFEPTPPPSSIATSSPSSSLAS----------------------LASSLVSGE------------------------------------GRDV------SSAPQSVVLKSAFRFTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHRIMMSTRMRRICEDALGIKHMQVAGEDEGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTRILHALLPKGFTARQILHAIRVLRKNAHSAAWGGEEETM----EYLLLHLREEELPSHYDPRGRNLDVVLPTAKLQALSLTT---EKRHPFGLEEEDWAALCLLLSGKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSFPLSSNPALE----------EELENLRAIYGDTTVTIPSFPPXXXXXLL---LSGALPPGHVLKVFL-RPSLYP-SLPAFALL-----EGPQANVRVQQELAACSQRMAGHAMLFELLLAATEALDNREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEGNTHEARNRNGTRPSPSPSFFSYARNG----FWNPASRXXXXXXHWTSSCEGCFLRDGAREKDS----------------------------SNRLVLVCGATGCGKTTQIPQFILEDAEEKGIGSTVKIVVSQPRRIAAIG 661
            +++  GHRQRGAG V V KG   R GV  + WQR P  LL E CQ +KR  A Y  A+ +   K  +M+ VLPD  K   KDL F P     +   +   ++L +                      LA    +G                                     GRD         + + + L    +F                                  ++MMS + R + E  L           +G+                                 T+ L A+   GFT  QI  A++   +       G E+  M    ++L L++ E +LP  ++P G  LDVVL + +  A   TT   ++   FG +  D   +                                               F L  N A+E          +E+  L AIY D  + I S        LL   ++ AL     L +FL   S YP  LP  AL        P       + L +C   M G  ML+++ +A      +++                                    V+ N    R++  ++ +P+ +     +NG    + N   R         S      L    + KDS                            +N++VL+CGATGCGKTTQIPQFIL++   +G G    I+ +QPRRIAAIG
Sbjct:   10 RQRQPGHRQRGAGTVSVSKGDTVRQGVLCKEWQRTPMQLLHEFCQSKKRRNAFYARARSKDAAK-FRMRCVLPD-DKDSSKDLSFCPEQEFETQDEAKHCAALLALKHVEPLRPHERKLPDPYRDLWLALGSQNGPADKGXXXXXXXXXXXXXXXXXXXXXXXXXXXGMDLWGRDAEEEVVEKKSDKPMTLTMDRKFASHKEFETAKLARTQERNKKLRARENRERANLPKQVMMSAQCRELIEGILRQLGEMQKKSSKGQ----------NLMDKESDLEQKKLEEEEFQKKATQRLKAI---GFTPAQINGALQSCSRGLKVDDEGAEDAHMTAIFDWLCLNIPEGDLPKKFNPEGTQLDVVLSSTQTDASPRTTVLVQRLMKFGYDRHDAVTVA---------NEFVQEHSGMSDEDLKTPSVATLFTILEKLSPHVKRHFSLEENGAIEATEELLDQRQDEIFALEAIY-DEKLKIMSLEDGSKAQLLEFEVTDALR----LHIFLSSTSKYPFELPLLALTSTEAKHQPHLLAACGEALKSCVHSM-GEPMLYDIYVAIDTYFQDKK-------------------RLSSSPPRIQLLKKLAAVKENAVN-RSQTPSKTTPNKAKSRKKKNGNAGMYKNQPKRVDSEAVRRMSE----KLLQSRKAKDSQQNFQQMLAARAKLPAGKEEAQVIECVQNNQVVLICGATGCGKTTQIPQFILDEHINRGAGGECNIICTQPRRIAAIG 707
The following BLAST results are available for this feature:
BLAST of NO27G01790 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
GAX26203.15.300e-5535.63hypothetical protein FisN_16Lh020 [Fistulifera sol... [more]
EWM20317.11.300e-5348.63atp-dependent rna [Nannochloropsis gaditana][more]
GAX25183.12.500e-5234.45ATP-dependent RNA helicase DHX36 [Fistulifera sola... [more]
CCA19937.13.300e-4931.58ATPdependent RNA helicase putative [Albugo laibach... [more]
XP_024581742.13.300e-4931.35atp-dependent rna [Plasmopara halstedii] >CEG45373... [more]
CBN75205.14.400e-4934.95conserved unknown protein [Ectocarpus siliculosus][more]
CCI39471.14.400e-4931.82unnamed protein product [Albugo candida][more]
ETP05313.11.300e-4831.62hypothetical protein F441_18049, partial [Phytopht... [more]
ETI35482.12.800e-4831.62hypothetical protein F443_18185, partial [Phytopht... [more]
ETK75726.12.800e-4831.62hypothetical protein L915_17706, partial [Phytopht... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR061ncniR061Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO27G01790.1NO27G01790.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|674329gene_9901Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO27G01790.1NO27G01790.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO27G01790 ID=NO27G01790|Name=NO27G01790|organism=Nannochloropsis oceanica|type=gene|length=7985bp
ATGGGTAAAAAGGGAAATTCATCATCACCTTCTTCTGCTCCTACAACTGT
GCCTGCCAGgtacgtacgccctgccttcctgccttcctcccccactcgcc
cctctctcaccgttcccaccactcttccagTGGATCGGCAGCCGCAGGGA
CAGGAGTGGACAACAAAAAGAAAGCACGAGGACACAGACAACGCGGAGCA
GGAGCGGTGATGGTTGACAAAGgtaaaaagaggaagggagggagggagcg
ggggtgaatgggagacgcaccatcatactccctgagcccgtgtgctccca
ccacccttgacggtcccctccctcccttccttcctcctctctccagGCCC
GGTCGAACGCAATGGCGTTACTCTCCAGACATGGCAGCGTCTACCAAGTA
CCCTCCTACAGGAGCACTGCCAACGgtacgccttctctccttccctccat
cctcctttccgttctccttccctccctcctcccctccctcctcccctccc
taccttcccctgatgccccagtccgcgcagacattctctgactgattcct
tcttactccatggctcattatgtcttatccgcctgaggcattaaggtcct
ggagccgctttctgctcggcctatctgattcactacctgagaatttctca
agccctccctccctccctccctccctccctccttccctcccttccttctc
ccagCGAGAAACGTCCGAAAGCGAACTATTACCCTGCCAAAATCCGTCCT
GGAGACAAGGGATGCAAGATGCAGgtgcgggagggagggagggagggagg
gagggagggagggagggagggacattgagaaggcggcggggaaaagaatt
gaggatgtaaaacatgtttcgttcccccctccactcctccctccctcctt
caccttccacttctagGTCGTCCTTCCTGATCCCAAAAAACAGCGGGAGA
AGGACTTACGGTTTGAGCCTACAgtgtgcagcgacgacagccacggggca
agggaaaacgctgcccttctcgccctcctccaccttactcccaccctccc
cctcgaaaggcacgtcttgtggccctcgcttcctctccctctccctcctt
tcttcagcataattcccatttcaattatctctccctccctccctccctcc
ctccctccctccctccctccctccctccctccctccctccctccctccct
ccctccctccctccctccctccctccctccaggaagttacctgagccata
caaatccacttggctgcacaacacctccgccaagaccactcaaagcaaag
acagagacaagaagagagcaggagaagagaaaaaagaaaagacccttgcc
cttcctccctccctccctcccccctcccttccgctcccggcgtcccttct
tcagcggcctcttcctcgtcctccctccaacagCCCCCCCCTTCCTCCAT
CGCGACCTCCTCTCCTTCCTCTTCCCTTGCTTCCCTCGCTTCCTCCCTCG
TGTCGGGGGAAGGCAGGGACGTGTCGTCTGCTCCGCAGTCCGTGGTCTTA
AAATCCGCATTCCGgtaagccctccctcccccccccctgacccctccctc
cctccctccctccctcccttttccttcttccactcgtttgggggaggggg
aggttcgtggtgatgatggggaccgggtgcaagggagggagggagggagg
gagggagggagggagggagggagggagggcaaggcgcaagcgtctctttg
agtggtagttatctctgtcaacagcaaggaagggagggagggagggaggg
agggagggtgggagggagggaaggcgagtttataaacaggattgctgaca
tgtctttctcttcacattggatagCTTCACGTCGACGAAGGAGAAGAAGA
AGGAAGAGGAAGAGCGTCGACAGCATCATATAAAGAGACAGCGgtgagca
agtcctccctccctccctccctccctccctctctccctccctcccttcct
ctaccttgtccatcatttcacattttattcttccctccttctcttcctcg
ttccctccctccctcccctccctcagAGAAAAAGAGCGAAAGAATAAGCA
TCGGGAAGATCACCGCATCATGATGTCCACACGCATGAGGCGGATATGCG
AGgttcgtcctccttctctccctccctccctccctccctcccgtatgttc
cgtttcctctttccctccctccccttttcccccctttgagccctcccttc
ctgttttattcaacactcgccaaacgcttattataacgtcgtcaagttca
acttccacctttcccctccctccctccctccctccctccctccctccctc
cctccctccctccctccctccctccctccctccctcccctccatagGACG
CCCTCGGCATCAAACACATGCAGGTGGCGGGGGAGGACGAGGGCGAGGAC
AGCACCAGCAGCGAGAGCGAGGGGGAGGAGGAAGAGGAGGAAGGGGGGGA
GGGAGGAGgtaggtgacagagggcgacatactcttatcctcccaagccct
ccctccctcccttcctccctcccttcctccctcccttcctgccaaggaga
cctccaggccaagcaatcgatttacaataaagatgcacggtaacaacctt
tcccttcctccctctccccctccctccctcagACGGGGCCGAAGCCAAGC
GCGTGAAAAAGGCCGAGGAGACGCGGATCTTACATGCCCTCCTCCCCAAA
GGCTTCACCGCGAGACAAATCTTGCATGCCATACGGGTGCTGCGGAAGAA
gtacgtgccttccctacctccgtctttccctcattgcctccccccctccc
tccttttaggctcggataccgaacacgggaagagcaaggagaagagacgt
gtctcagccctccctccctctctctccccctcccttccttcctcatcgtc
tctgcgaaagccaaccctagccctacccttaaccctcacataatgactct
gcgaaagctaaccctaagcctgcccctgatcctaacatagTGCACACAGC
GCGGCATGGGGGGGAGAGGAGGAGACAATGGAATACCTCCTCCTCCACCT
GAGGGAGGAGGAGCTACCCTCCCACTATGATCCGAGGGGCCGGAACCTAG
ACGTCGTTTTGCCGACGgtgggaagggagggagggagagaggaagggaag
gcgcatagtccacagcgctgcggttcaagggtctgcatgagccgttggac
ccactcctcctccctccctcccttcctccctccatccctcgctccctccc
tccagGCAAAGCTGCAGGCGCTCTCTCTCACCACCGAGAAGCGGCACCCC
TTTGGTCTTGAGGAGGAAGATTGGGCTGCTCTCTGCCTCCTGCTGAGTGG
GAAAAAGGGAGGGAAGGAGGGAGAGAGGGATCAGGAAGGGGACGACGGCG
GCATCATTCAAGCCTTGCAAAAAGCCCTCCTCCCCTCCTCCCTCCCTCCC
TCACCCCCTCCCTCTTCCTCCTCTTTCCCCCTCTCTTCGAATCCAGCCCT
CGAAGAGGAGCTTGAAAATCTTCGCGCAATTTATGGCGACACAACCGTTA
CCATTCCTTCCTTTCCCCCCTCCCTCCCTCCCTCCCTCCTCCTCTCCGGC
GCCCTCCCTCCCGGCCACGTCCTGAAGGTCTTCCTCCGCCCCTCCCTCTA
TCCCTCCCTCCCTGCCTTCGCCCTGCTCGAGGGCCCCCAGGCTAACGTCC
GTGTACAGgtgcgggaggaaggagggagggagggagggagggagggaggg
agggcggagaatgaaaaatggtcgaatgccaaagattggattgctggaaa
aatactacagtctcacccctccctcccgccctccctccttccctccctcc
tctccagCAAGAGCTCGCTGCCTGTTCTCAGCGAATGGCTGGTCATGCCA
TGCTCTTCGAACTTCTGCTGGCGGCCACCGAGGCCCTGGATAACCGAGAG
gtatctccctccctccctccctccctccctccctcccttcctccctccct
ccctccctccctccctccccttctccctccctccccttccctccctccct
ccctccctccctccctccctccctccctccctccctccctccctctagtt
tatgtctctagtcctgaaccagctggtgatagccccaacgaaaatcgacg
aggctgggacagacgtcctctcattcccctcctcattctctctctccctc
gctccctcattctcttctccccctcacctcttcatccgcgtttcttcttg
ttcagatgacaccactcaccctccctccctccctccctccctccctccct
ccctccgcagCAAGAAGCCAGCCACGAGAAGACTTATCTCCTTTATCAGC
CTCCACCACCCTCTGAGGAGGAGGAGGGAAAGGTCGAGGGGAATGAGGAC
GAGGAGGAGGAGGACGGAGTCGAAGGgtaaggaaggaagggaggaaggga
ggaagggaggaagggaggaaacttattcactcgttcgcgcctttttcctc
ttctcctccctccctccctcccttccctcctccctccctccctccctccc
ttcgtccccagCAACACACATGAAGCGCGGAATCGCAATGGAACACGTCC
CTCCCCCTCCCCCTCCTTCTTCTCTTACGCCCGAAACGGCTTCTGGAATC
CCGCCTCCCGCCGTCCCCCCCCCCCTCCCCATTGGACGAGCAGCTGCGAA
GGATGCTTCTTGAGAGACGGAGCACGAGAGAAGGACAGCAGgtgtgtaat
caccctcccttcctcccttcctccctccctatccgtcctccttataccct
taaagccaacgatcaatctaaatcctccttccctccctccctagatggca
gctgctcgggccacactcccagcggcagaggccagaaaccacttcctcca
tctcttgcacagCAACCGCCTGGTGCTGGTGTGTGGCGCGACAGGgtggg
gagggagggaggaagggagagagggagggagggagggtgggtaggttgga
ggagaggggtaggaggaaaatgctctgcaaccctctcggcattgaccctc
cctccctccctccctccctccctccctccctccctcccttccttccttaa
gGTGTGGAAAGACCACGCAAATTCCCCAATTTATTTTGGAGGACGCAGAG
GAGAAGGGGATCGGATCGACGGTCAAGATTGTCGTCTCGCAGCCCAGGCG
CATCGCTGCCATAGGTAGATCCgtccgtcnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnncgttcatatcttgatttctca
tctttctctcccttcctccgtccctccgtccctccgtccctccgtccctc
cctctctttccagATCATGACAATGTTCTCCTCCTCTTCCTCCTCCTCCT
CCTCCTCCCTCCTCTCCCATCCCTCCACCTTCCTCTCCCTCCTCCTGGAC
CCTCCAGAAGCAGCCACGATCCGAGCCGCTCTTTCCACCCTCGAAGAGAT
CCAGGCCGTGGTGCCGAAGGGCGACGAGgtagggaaggaaggaggggagg
gagggattgcagcgtgctctacctgacaagggtcaccgctctgtgtgtag
tctcatgcactgctctccccttcctccctccctccctccctccctccctc
cctttcccctcatcctcagCTGCGCATCACTCCTTTGGGTCGGCATTTGG
CTGCCTTGCCTTGTCCCGTGCGTCTAGgtaagcaagcctccctccctccc
tccctccctcgcccttgttcccttcctcccccccctttttttacaaaaag
gaaagaaatgctcaccttcactgtccctccctccctccctccctccctcc
ctccctccctccctagGGAAAATGCTCATCTACGGGGCCTTGCTGGGCGT
CCTGACTCCCGCCTTGGCCATCGCTGCGTGCATGTTGGTGCGAAACCCCC
TCCTCTCCCTCCAATTTCGGGAAGACAGACAAGAAGTAGAGACCGCGCGT
GTCCGTCGGCTTGgtacgtccctccctccctccgtccctccgtccctccc
tccctccctccctgaatctttctcacataacacacgcctttttcaccttc
tctccctctttccctccctccctccctccctccctccctccctccctccc
cccctccctccctcgcccagGTATCGGCGGCTCCTTCGGAAAAAGCGACC
ATCTCCTTCTTGCCCGCGCCGTAGAGGCCTACCTGAAGGAGGGAGGGAGG
GAGGGAAGGAGGGCGCTGTGTCAGGAAGTAGGACTGTCCTTCGAAAGGAT
GTGTGAGGTCCAAACGCTCATCTCACAGCTGGGGAGAGACATGTCTTCCC
TCGGATTCCCCCCCGCTCCCTCGTCTCTGTCCTCGACACGGGTGGAGCGG
GGAGGAAGGGAGGGAGGGAGCGATGGAGCACGGGCACTGCTGGCCACCAT
GGACGAGAAGGGCGGACGAGCCTACTGGCGTCTGGTCAAGGCGGCGGTGG
GCGTAGGGCTTTATCCTAACGTAGTTAAGGTGGTAAGGCCGCCGTTTAGG
TATGCCAAGGTAGCAGGAGGTGCCGTGCAAGTCGAGGCCCACGCGCGCGA
GCTGTCTTTCTATGTCTTCAACAAGCACAAAGAGgtatgatgtttctcgt
acccctcttcctctcttcccttcccttccctttccatcttgaactcgaac
atgaggcgtttgaatcggaccatcggcgactattctaacctcccttcctt
ccttccctccctccctccctccctccctccctcccctgttcctgcctgac
agCCACCCGTCGAGCCGCTCGCCTCCTTCTACTTCCCCCACAAGGACAAG
GAGGACCGCGTGTACATTCACCCTTGCTCGATAAACTATTCCCAAGGCGC
CTACACCGTCCCGTGGCTCGTTTTTTCCGACGTTATGAGAACCACCCGGG
CCTTTGTGCGAGACTGCACGGAGgtaagcctccattccctctccctccca
gccgctttctttcgtttttcttttgattcctttttgtgtaagagactgcc
tccatcctttcctccctccgatccctcccctaccaacagGTCTCCCCCTA
CGCACTCCTCCTGGCCGCCAATACCCTTCGAATGCAGCATGACATCTCCT
CCTCCTCCTCCTCCAGCTCCCGCCCTCCATCCTCTGCTGCCAGTGGCACC
CTCCTGCTGGAAGAAGAGGGATGGATTCGCTTTGCGGCCGTGGGAAGAAT
AGGTGCACTGGTGAATGCTCTCAAGAGGAAGGTGGACGAGTTGCTAGAGg
tacacctccctcccttccctctctttcctctctttcctcccttccctccc
tccctccacccctcctcccatcctgaagtgagtgcacttatttcctttcc
ctccttcccaccttccctacttctattacctaataaaccaatacgaggct
tttgcaaccatcctccctccctccttccctccctcctttcctccgtcttt
cacgtgccagGAAAAAGTGCGAAATCCCGAGCTGGAGCTGGGGGACTCAC
CTGCGGCTCGGGCGCTGGTCAAGCTGATTGCGACCGATGGGATGGGGTAG
GAAGAGAGGGAGGGAAACAAGGGAAGAAAAGTACGTGAAAGGGAAAATAA
ACCAATATTGAACGCACCAGATGCACGACGAAAAGCGAGAAAGCAGAAAA
ACGAAGCCGAAATTCAGTGTAACGGAACGAAAAACATGATTTAAAAAATA
TTTCCTTCCACTTTCTATGTGTGTGTGTGAGGTGGGTGGGACGTGATGAC
TTGTTGCTTCTTTATGCTTCCTTTCTTAAGCTAGCCCCTCCTTCCCTCCC
TGCCCCACCTTCCCTCCCTTCCTCCCCCTTCACAG
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protein sequence of NO27G01790.1

>NO27G01790.1-protein ID=NO27G01790.1-protein|Name=NO27G01790.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1097bp
MGKKGNSSSPSSAPTTVPASGSAAAGTGVDNKKKARGHRQRGAGAVMVDK
GPVERNGVTLQTWQRLPSTLLQEHCQREKRPKANYYPAKIRPGDKGCKMQ
VVLPDPKKQREKDLRFEPTPPPSSIATSSPSSSLASLASSLVSGEGRDVS
SAPQSVVLKSAFRFTSTKEKKKEEEERRQHHIKRQREKERKNKHREDHRI
MMSTRMRRICEDALGIKHMQVAGEDEGEDSTSSESEGEEEEEEGGEGGDG
AEAKRVKKAEETRILHALLPKGFTARQILHAIRVLRKNAHSAAWGGEEET
MEYLLLHLREEELPSHYDPRGRNLDVVLPTAKLQALSLTTEKRHPFGLEE
EDWAALCLLLSGKKGGKEGERDQEGDDGGIIQALQKALLPSSLPPSPPPS
SSSFPLSSNPALEEELENLRAIYGDTTVTIPSFPPSLPPSLLLSGALPPG
HVLKVFLRPSLYPSLPAFALLEGPQANVRVQQELAACSQRMAGHAMLFEL
LLAATEALDNREQEASHEKTYLLYQPPPPSEEEEGKVEGNEDEEEEDGVE
GNTHEARNRNGTRPSPSPSFFSYARNGFWNPASRRPPPPPHWTSSCEGCF
LRDGAREKDSSNRLVLVCGATGCGKTTQIPQFILEDAEEKGIGSTVKIVV
SQPRRIAAIGRSIMTMFSSSSSSSSSSLLSHPSTFLSLLLDPPEAATIRA
ALSTLEEIQAVVPKGDELRITPLGRHLAALPCPVRLGKMLIYGALLGVLT
PALAIAACMLVRNPLLSLQFREDRQEVETARVRRLGIGGSFGKSDHLLLA
RAVEAYLKEGGREGRRALCQEVGLSFERMCEVQTLISQLGRDMSSLGFPP
APSSLSSTRVERGGREGGSDGARALLATMDEKGGRAYWRLVKAAVGVGLY
PNVVKVVRPPFRYAKVAGGAVQVEAHARELSFYVFNKHKEPPVEPLASFY
FPHKDKEDRVYIHPCSINYSQGAYTVPWLVFSDVMRTTRAFVRDCTEVSP
YALLLAANTLRMQHDISSSSSSSSRPPSSAASGTLLLEEEGWIRFAAVGR
IGALVNALKRKVDELLEEKVRNPELELGDSPAARALVKLIATDGMG*
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