NO27G01590, NO27G01590 (gene) Nannochloropsis oceanica

Overview
NameNO27G01590
Unique NameNO27G01590
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length7898
Alignment locationchr27:530991..538888 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr27genomechr27:530991..538888 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO27G01590 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR061ncniR061Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR103ngnoR103Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO27G01590.1NO27G01590.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO27G01590.1NO27G01590.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO27G01590 ID=NO27G01590|Name=NO27G01590|organism=Nannochloropsis oceanica|type=gene|length=7898bp
ACAGCCTAATTTCTACTCTGCCGTCTAGCTACCATGTTCCGCCACTCTGC
TATCCTCTTTGTGGCTCTCCTCTGCGTGGCAGgtaagcaagaggtaacaa
gagagagacacactgagaaatttgtggaggcgcagtaggccacattgtgc
catgtatagctaaaacgcttataagaaagataagaaataaataaatgttc
ctaggattattagtacatcctccggaagagctctttatggcccatgctaa
agcagaccgacactgtaccgtgcaggtatcatatccctatgagcacagta
gcacaataccattaaatcaagacaagcaatcacaacctcgccacacatgc
acatgtaacgacagATGCCCATTTCGCGGCCCTGACCACAAATAAAAGCC
ACACGGGCAAAAAATTTCCCAAAGGTACCCACAACGACAAGACGAAACTG
CGCAAGGTGTCTGGCTTCAATCTTTGCACCCAGCCCTATCAAGCTTTCAT
CGGTGGGCCTAATGTCGCCGGTACAGGCGCCTTTTCGTATCCCGTCTACC
CCGGTGACTGCACAGAGgtacgcaagagtgacgagagcatcattcctagg
gatttatatttggccagatagaaacgacattggccctcaaagctcacctg
agtacgtattgtacaactcactttcctgggacaatacacaaccatcagGT
GGACGACACGACCAAGCAGGTCGGCACCTTGAGCGCCACGTGCTTGGGCA
ACCCCTACGAGGGCTTGTACTTGACTGAAACAAATGTCCGGTCGACCGAG
GGGTTTAATAATCCTATGGACAGTGTTGGACCGTGCACAGGTGGTGCAGG
CGCTTGCACTTACTTTCCTACTAGTGCGCCTCAATTAACGGCAATAAACT
TAGGGCTTGTTCCCGATGATACCTCTGAAGAGGTTATCCAGGAGACTGTA
AATGACGAATGCGTTGCAGTATACAATTTACAGGCATCTCTTTTTTCCAC
AAAATCTGAATGCTCCGCCGAGCTCCGTCTTAGCGGGGATGATCGCAAGA
ACAAGCATCCAGGAAGCATCTTGTCTTTCCACTTCTCGACCAACACCACT
TTAGTCCCCGgtacgttgggttgacagtatgtatatatggatgtatgtcg
cggttgggaaggggtaccatttcgatgcatttcatatctgtgtgcggaaa
atttgcttcttaaacctggacccaacaaccccacgacttgcatcatgatc
acaatactcaccgtttccctccctccgtcatttctccctcgtctcttttt
ccctacagCTGGCAGCACCTACACAAGCGAGACTCAATATGGACTCGGCG
GTACCGGCTTTTCAAGTGGGGCAGCCGGTAGTGACTACATCACCTCTGTC
AATTTGCATGCTTACGTGGTGATCACCAGTGTCACGTGTGTTTACCGGCC
TGACACGATTGTTTCGACGTTCAGTAAGATCTATGGCGGCAGCGGCCGCT
TTGCGAAGTTCCCCGCCTCCAAGgtggcctcggtaaagcaagacacgctt
ttgatgaccgtcgcacctggtgcatcgaaccctatcaatcccttccaatt
tcttcctcaggaatgggaaacccagctggaggtgaactacgtaaagcctt
acttccattccagcatgctctaaggactatcgaatgtggggaaggagttc
gcttattctagtgttccaacacttcttgagatcctttccctgcaaaaaca
gcatgaatcatcgtatgaagatgtcaagatttgttgaggtgtgtctgtct
ttctgtggttttcgtctttgtctgtgaattttgtgccttgccagtctagt
aaagcacaacagactgcgtcctgattttggcttagctggctcatatgggg
agcaccgttatacaccatttaaatttcattattattacagagatattcac
aggcttagaatggggattactgaaggcttccagactgacagtcgggatgc
cccagattatatttctgacgggtcgatttgtccatgcgcgtgatattgtt
cttgtcagctgtgttgtttatgtgttgtgttgtatatgtgtgcctttcct
tagttgagcacttcttgtgttgtgtgcttacattccctggaccctcccga
agagaccagtcacggaatattttaacctgtggagcccgatattctacttt
atcgatctttctgaagaagagaaggtattacttgtgaaaaaggccgcact
aatagtgtaagtataagaacactccatttcttttgattgacatgttagcg
tgtgagagtgcgttttattggtaggcttcgaccgattggattttccgata
acggtctatacagaaggttatttaagttttttgttgtttttatttttggg
gggtttggtagccaccaggcgcttcgtcaccggcatggtgacatctactt
ctatcttaatgtgagcaccaagattagcccgccccgcatgacgggttagc
tgccggcatcaggccactagcgttttcgcgggacgatgacaccatcgcgc
tttgggcaagcggctcctttggctgcccgtcatcccgcgcaaaggagtgg
gactgatgccggcagctaacccgtcatgcggggctagggctatttttggt
gctcaaaatatgatagaagtagatgtcaccatgccggtggtagagcacct
agtggctatcaacccccccaaaagataaaaacaacaaaaaacttaaataa
ccttctgtatagtccgtacggattatgccagttacatatatggttgttgc
tccgcgcttcatttgaaacgctatctaagttgtttctgaaaggaaatatg
ctacttggtgtggtaatctaaccgtcgttgtattcttattattatcagta
ttctttttatcatattaccgacattcttgagggggcgtcaggcctgtgca
cttggaggcacttgccagtgatggaaggcacgtattaccgtctttaagcg
agctcccacgtcgaccgccaaaggtctcacaacacaagggtctttaacta
tatcctccagtgcacggtagagtacagtactccgttgacaagcggcgggg
gcttggttggacaagttggaagcggggttggcggagtgagtgcggaagag
ataaaacgagcaagtgcatcacatcaaaataaagtagagaaaggaagaat
tcgctggttaaaatgtttgtggagccctcgttagtcgtgtatgagtccta
ctaccccctcatgcccacctcttcttcataaccccggctactgtacatgt
ctttgaatgtgtcttttgaatatttttatacatctgcacagggtcccaaa
agctagtcctgcggtccgccggctcctcccctctttattttgttctccaa
aatggcggcctggtacggtttgaagtcctgcgtttgcgtcagtcgcaggt
catacttgtaccgctccacctccgccctcaaacgctcctccgacaacctt
cgctcgccctcgacgcgcgcgacgtctgctttggcctgagcgacgtccgt
cgccgccttgtcgtgaatgcgcttgatctccgtctggtcgagatgatgga
ccgccacagctgtagagccagcaaccgccgccaccaagcccaagacagct
accgacactttcaccatttcaaatgtcttatcggagcccccttcactgcc
cgtgcctgtacccgtgtgggttgtcgagagagacgccccccgcagcccgc
gtcccttccctgttggcgcgtatggatgtgcttgtgcgtgaacaccttgg
tgtggttccttgtccgcacaataaggattgagattcaaacatgacagaca
gacagacgggaataaatcaacatgccgccggcagtttgcggccgcgtgca
ccgcacgtccctccccaccccaccaccctaaagccctccccaatatgcat
gagctcaagccaccttacctcgaccggattgcgcgccccgtgtccacgcc
acggctcccgctttcgtggccaagttgcacaacatgctctcgtgcttcct
tgtggtggtcgtggttgatggcggcagcaagcagcaaggcaagcagcagt
gcatgttacgggagggagggaggaaggggcgagtgagtgtttgaggtcgg
tttccaagcctacaacaagctattcagaaccacagccgctacgccataag
agtgaaagcctcctcactgtacgcacgctagacctcagaatggtggctgc
gcgggtgcccattgcctagtgtgccaaagggcaagaccaaaagagggagg
aggcaggccgtgcttgatggtgatgcatggagcaacgaaccccagagcga
agcggaggcacccaccaccacgaaaccagccaaagaagccggcacaattg
caagagggcgacgtgacaaatctgtacgggtgggtgggtattgggtttgg
aaattgagtgttctgccgcacacaagactacggacaagggagacacaagc
aaaaaactcgtggagaggtcccgtgtacaagactgcggccgcggccagat
gatggcgcttgttgacctcacgtgccatcttgccccaatgtacatataca
caacaaccggctggcattattgacaacacaatgtcgtctctggcacgcgc
ctctggtggctttcttccgaggcccaaagcctttgctaaaggtccttgac
tccctgctttcatatgataacctcctccctcctccccaccgcaccgtctg
tcccccccaagccccctccttcgacaagcggcgggggcttggttggacaa
gttggaagcggggttggcggagtgagtgcggaagagataaaacgagcaag
tgcatcacatcaaaataaagtagagaaaggaagaattcgctggttaaaat
gtttgtggagccctcgttagtcgtgtatgagtcctactaccccctcatgc
ccacctcttcttcataaccccggctactgtacatgtctttgaatgtgtct
tttgaatatttttatacatctgcacagggtcccaaaagctagtcctgcgg
tccgccggctcctcccctctttattttgttctccaaaatggcggcctggt
acggtttgaagtcctgcgtttgcgtcagtcgcaggtcatacttgtaccgc
tccacctccgccctcaaacgctcctccgacaaccttcgctcgccctcgac
gcgcgcgacgtctgctttggcctgagcgacgtccgtcgccgccttgtcgt
gaatgcgcttgatctccgtctggtcgagatgatggaccgccacagctgta
gagccagcaaccgccgccaccaagcccaagacagctaccgacactttcac
catttcaaatgtcttatcggagcccccttcactgcccgtgcctgtacccg
tgtgggttgtcgagagagacgccccccgcagcccgcgtcccttccctgtt
ggcgcgtatggatgtgcttgtgcgtgaacaccttggtgtggttccttgtc
cgcacaataaggattgagattcaaacatgacagacagacagacgggaata
aatcaacatgccgccggcagtttgcggccgcgtgcaccgcacgtccctcc
ccaccccaccaccctaaagccctccccaatatgcatgagctcaagccacc
ttacctcgaccggattgcgcgccccgtgtccacgccacggctcccgcttt
cgtggccaagttgcacaacatgctctcgtgcttccttgtggtggtcgtgg
ttgatggcggcagcaagcagcaaggcaagcagcagtgcatgttacgggag
ggagggaggaaggggcgagtgagtgtttgaggtcggtttccaagcctaca
acaagctattcagaaccacagccgctacgccataagagtgaaagcctcct
cactgtacgcacgctagacctcagaatggtggctgcgcgggtgcccattg
cctagtgtgccaaagggcaagaccaaaagagggaggaggcaggccgtgct
tgatggtgatgcatggagcaacgaaccccagagcgaagcggaggcaccca
ccaccacgaaaccagccaaagaagccggcacaattgcaagagggcgacgt
gacaaatctgtacgggtgggtgggtattgggtttggaaattgagtgttct
gccgcacacaagactacggacaagggagacacaagcaaaaaactcgtgga
gaggtcccgtgtacaagactgcggccgcggccagatgatggcgcttgttg
acctcacgtgccatcttgccccaatgtacatatacacaacaaccggctgg
cattattgacaacacaatgtcgtctctggcacgcgcctctggtggctttc
ttccgaggcccaaagcctttgctaaaggtccttgactccctgctttcata
tgataacctcctccctcctccccaccgcaccgtctgtcccccccaagccc
cctccttcgacaagcggcgggggcttggttggacaagttggaagcggggt
tggcggagtgagtgcggaagagataaaacgagcaagtgcatcacatcaaa
ataaagtagagaaaggaagaattcgctggttaaaatgtttgtggagccct
cgttagtcgtgtatgagtcctactaccccctcatgcccacctcttcttca
taaccccggctactgtacatgtctttgaatgtgtcttttgaatattttta
tacatctgcacagggtcccaaaagctagtcctgcggtccgccggctcctc
ccctctttattttgttctccaaaatggcggcctggtacggtttgaagtcc
tgcgtttgcgtcagtcgcaggtcatacttgtaccgctccacctccgccct
caaacgctcctccgacaaccttcgctcgccctcgacgcgcgcgacgtctg
ctttggcctgagcgacgtccgtcgccgccttgtcgtgaatgcgcttgatc
tccgtctggtcgagatgatggaccgccacagctgtagagccagcaaccgc
cgccaccaagcccaagacagctaccgacactttcaccatttcaaatgtct
tatcggagcccccttcactgcccgtgcctgtacccgtgtgggttgtcgag
agagacgccccccgcagcccgcgtcccttccctgttggcgcgtatggatg
tgcttgtgcgtgaacaccttggtgtggttccttgtccgcacaataagaat
tgggattcaatatggactcggcggtaccggcttttcaagtggggcagccg
gtagtgactacatcacctctgtcaatttgcatgcttacgtggtgatcacc
agtgtcacgtgtgtttaccggcctgacacgattgtttcgacgttcagtaa
gatctatggcggcagcggccgctttgcgaagttccccgcctccaagGTGG
CCTCGGTAAAGCAAGACACGCTTTTGATGACCGTCGCACCTGGTGCATCG
AACCCTATCAATCCCTTCCAATTTCTTCCTCAGGAATGGGAAACCCAGCT
GGAGGTGAACTACGTAAAGCCTTACTTCCATTCCAGCATGCTCTAAGGAC
TATCGAATGTGGGGGAGGAGCTCGCTTATTCTAGTGTTCCAACACTTCTT
GAGATCCTTTTCCTGCAAAAACAGCATGAATCATCGTATGAAGATGTTTC
ACACCCACGATCCGACCAATGACAATGTTCCATGGCCATGAAGACTACGA
TAATGTTCTCGTCTGCTTTCTAGTGTTCTGAATGTGTGTCTTTCCTTGGT
TGAGCACTTCTTGTTTTGTGTGCTTATATTCCCTGGACCCTCCCGAAGAG
ACCAGTCATGGAGTTTAATCTTCTGACCCCGATTTCCTACATTATCCATC
TTTCTGAAGAAGAGAAGGTATTACTTGTGAAAGAAGCCGTACTAATAT
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protein sequence of NO27G01590.1

>NO27G01590.1-protein ID=NO27G01590.1-protein|Name=NO27G01590.1|organism=Nannochloropsis oceanica|type=polypeptide|length=343bp
MFRHSAILFVALLCVADAHFAALTTNKSHTGKKFPKGTHNDKTKLRKVSG
FNLCTQPYQAFIGGPNVAGTGAFSYPVYPGDCTEVDDTTKQVGTLSATCL
GNPYEGLYLTETNVRSTEGFNNPMDSVGPCTGGAGACTYFPTSAPQLTAI
NLGLVPDDTSEEVIQETVNDECVAVYNLQASLFSTKSECSAELRLSGDDR
KNKHPGSILSFHFSTNTTLVPAGSTYTSETQYGLGGTGFSSGAAGSDYIT
SVNLHAYVVITSVTCVYRPDTIVSTFSKIYGGSGRFAKFPASKVASVKQD
TLLMTVAPGASNPINPFQFLPQEWETQLEVNYVKPYFHSSML*
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Synonyms
Publications