NO27G01570, NO27G01570 (gene) Nannochloropsis oceanica

Overview
NameNO27G01570
Unique NameNO27G01570
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length4845
Alignment locationchr27:518208..523052 +

Link to JBrowse

Properties
Property NameValue
DescriptionRepressor of RNA polymerase III transcription
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr27genomechr27:518208..523052 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0016480negative regulation of transcription by RNA polymerase III
GO:0016480negative regulation of transcription by RNA polymerase III
Vocabulary: INTERPRO
TermDefinition
IPR015257Maf1
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Homology
[Close]
BLAST of NO27G01570 vs. NCBI_GenBank
Match: XP_009041821.1 (hypothetical protein AURANDRAFT_33964 [Aureococcus anophagefferens] >EGB03492.1 hypothetical protein AURANDRAFT_33964 [Aureococcus anophagefferens])

HSP 1 Score: 160.6 bits (405), Expect = 7.600e-36
Identity = 100/280 (35.71%), Postives = 139/280 (49.64%), Query Frame = 0 
Query:    1 MKFLDFERLGLLSAALANKHVGDKVLMGRIEAYSCKPLSDDKRIKKELESDLGGSNGALGATGGGLAGSLPTTHHLHXXXXXXXXXXXXINAGLCQSSVPPSLPSSFTSSISRIPPSGSGFRAGSMPTGFSXXXXXXXXXXXXXXXXXXXXSSPLGDLSDSATRKLLVYLISTLNAAFPDYDFSGVRSEQFLKEPDLRLVMSDVNRHLTELGDAVPPTFLEEMWAAIDEALGVTLKDCEIYSYLPDMEGDPFSYN-LWSFNYFFVNRRMKRIVFFSCIVK 280
            MK L+  RL  L+A L  + +GD+V+ GR+EA+SCK   DDK++ K+LE                                                          TSS             GS+ T                       +SPLG LS S+TR+LL+ LIST+NA+FPD+DFS +R EQF +E     V     R+L+E+ D      L+E+WAA++EA  V+LKDCE++SY+PD++ DPFS   LWSFNYFF N+ +KRIV+FSC+ +
Sbjct:    1 MKLLENNRLSALTAFLTERSLGDRVIDGRVEAFSCKRAGDDKKLSKQLEKQYA---------------------------------------------------DELTSS------------PGSLDT-----------------------TSPLGVLSASSTRRLLIDLISTMNASFPDHDFSALRPEQFCREASADFVARSCTRYLSEISDQ-GFDLLQELWAAVEEA--VSLKDCEVFSYVPDLDSDPFSEGALWSFNYFFFNKTLKRIVYFSCVAR 191
[Close]
BLAST of NO27G01570 vs. NCBI_GenBank
Match: XP_002997140.1 (conserved hypothetical protein [Phytophthora infestans T30-4] >XP_002902148.1 RNA polymerase III transcription repressor MAF1 [Phytophthora infestans T30-4] >EEY56820.1 RNA polymerase III transcription repressor MAF1 [Phytophthora infestans T30-4] >EEY69641.1 conserved hypothetical protein [Phytophthora infestans T30-4])

HSP 1 Score: 160.6 bits (405), Expect = 7.600e-36
Identity = 98/290 (33.79%), Postives = 136/290 (46.90%), Query Frame = 0 
Query:    1 MKFLDFERLGLLSAALANKHVGDKVLMGRIEAYSCKPLSDDKRIKKELESDLGGSNGALGATGGGLAGSLPTTHHLHXXXXXXXXXXXXINAGLCQSSVPPSLPSSFTSSISRIPPSGSGFRAGSMPTGFSXXXXXXXXXXXXXXXXXXXXSSPLGDLSDSATRKLLVYLISTLNAAFPDYDFSGVRSEQFLKEPDLRLVMSDVNRHLTELGDAVPPTFLEEMWAAIDEALGVTLKDCEIYSYLPDMEGDPFS-YNLWSFNYFFVNRRMKRIVFFSCIVKRCEREGGREE 290
            MK+L+  +L  L++ L +  +GD+VL G+IE YSCK    DKR+ K LE                                              Q  +  S                                                 SSPLG ++  ATRKLL+ LIST+NA+FPDYDFS V+ EQF KEPD R+ +  +N  L EL +A    F+E+MW AI EA  + L +C++YSY+PDM+ DPFS  NLWSFNYFF N+  K++++F+C+ K    E   ++
Sbjct:    1 MKYLEEPQLSWLNSVLGSYEIGDRVLNGKIETYSCKKAGSDKRLAKSLEL-------------------------------------------YYQQEIEAS--------------------------------------------ADLLSSSPLGPIAAPATRKLLINLISTMNASFPDYDFSAVKPEQFRKEPDFRIALQRINHDLAELLEAEGNGFVEKMWEAIAEA--IKLDECDVYSYIPDMDSDPFSDGNLWSFNYFFYNKVQKKVLYFTCLCKGLTYESDMDD 201
[Close]
BLAST of NO27G01570 vs. NCBI_GenBank
Match: ETI56977.1 (hypothetical protein, variant 2 [Phytophthora parasitica P1569] >ETK96760.1 hypothetical protein L915_00599 [Phytophthora parasitica] >ETL50110.1 hypothetical protein L916_00602 [Phytophthora parasitica] >ETM03169.1 hypothetical protein L917_00576 [Phytophthora parasitica] >ETM56432.1 hypothetical protein L914_00595 [Phytophthora parasitica] >ETO85737.1 hypothetical protein F444_00638 [Phytophthora parasitica P1976] >ETP26771.1 hypothetical protein F441_00638 [Phytophthora parasitica CJ01A1] >ETP54742.1 hypothetical protein, variant 2 [Phytophthora parasitica P10297] >KUF90191.1 G patch domain and ankyrin repeat-containing protein 1 [Phytophthora nicotianae] >KUF93555.1 RNA polymerase III transcription repressor MAF1 [Phytophthora nicotianae])

HSP 1 Score: 160.2 bits (404), Expect = 1.000e-35
Identity = 97/284 (34.15%), Postives = 135/284 (47.54%), Query Frame = 0 
Query:    1 MKFLDFERLGLLSAALANKHVGDKVLMGRIEAYSCKPLSDDKRIKKELE----SDLGGSNGALGATGGGLAGSLPTTHHLHXXXXXXXXXXXXINAGLCQSSVPPSLPSSFTSSISRIPPSGSGFRAGSMPTGFSXXXXXXXXXXXXXXXXXXXXSSPLGDLSDSATRKLLVYLISTLNAAFPDYDFSGVRSEQFLKEPDLRLVMSDVNRHLTELGDAVPPTFLEEMWAAIDEALGVTLKDCEIYSYLPDMEGDPFS-YNLWSFNYFFVNRRMKRIVFFSCIVK 280
            MK+L+  +L  L++ L +  +GD+VL G+IE YSCK    DKR+ K LE     ++  +   LG                                                                                           SSPLG ++  ATRKLL+ LIST+NA+FPDYDFS V+ EQF KEPD R+ +  +N  L EL +A    F+E+MW AI EA  + L +C++YSY+PDM+ DPFS  NLWSFNYFF N+  K++++F+C+ K
Sbjct:    1 MKYLEEPQLSWLNSVLGSYEIGDRVLNGKIETYSCKKAGSDKRLAKSLELYYQQEIEAAADLLG-------------------------------------------------------------------------------------------SSPLGPIAAPATRKLLINLISTMNASFPDYDFSAVKPEQFRKEPDFRIALQRINHDLAELLEAEGNGFVEKMWEAIAEA--IKLDECDVYSYIPDMDSDPFSDGNLWSFNYFFYNKVQKKVLYFTCLCK 191
[Close]
BLAST of NO27G01570 vs. NCBI_GenBank
Match: ETI56978.1 (hypothetical protein, variant 3 [Phytophthora parasitica P1569] >ETK96761.1 hypothetical protein, variant 1 [Phytophthora parasitica] >ETL50111.1 hypothetical protein, variant 1 [Phytophthora parasitica] >ETM03170.1 hypothetical protein, variant 1 [Phytophthora parasitica] >ETM56433.1 hypothetical protein, variant 1 [Phytophthora parasitica] >ETO85738.1 hypothetical protein, variant 1 [Phytophthora parasitica P1976] >ETP26772.1 hypothetical protein, variant 1 [Phytophthora parasitica CJ01A1] >ETP54743.1 hypothetical protein, variant 3 [Phytophthora parasitica P10297])

HSP 1 Score: 160.2 bits (404), Expect = 1.000e-35
Identity = 97/284 (34.15%), Postives = 135/284 (47.54%), Query Frame = 0 
Query:    1 MKFLDFERLGLLSAALANKHVGDKVLMGRIEAYSCKPLSDDKRIKKELE----SDLGGSNGALGATGGGLAGSLPTTHHLHXXXXXXXXXXXXINAGLCQSSVPPSLPSSFTSSISRIPPSGSGFRAGSMPTGFSXXXXXXXXXXXXXXXXXXXXSSPLGDLSDSATRKLLVYLISTLNAAFPDYDFSGVRSEQFLKEPDLRLVMSDVNRHLTELGDAVPPTFLEEMWAAIDEALGVTLKDCEIYSYLPDMEGDPFS-YNLWSFNYFFVNRRMKRIVFFSCIVK 280
            MK+L+  +L  L++ L +  +GD+VL G+IE YSCK    DKR+ K LE     ++  +   LG                                                                                           SSPLG ++  ATRKLL+ LIST+NA+FPDYDFS V+ EQF KEPD R+ +  +N  L EL +A    F+E+MW AI EA  + L +C++YSY+PDM+ DPFS  NLWSFNYFF N+  K++++F+C+ K
Sbjct:    1 MKYLEEPQLSWLNSVLGSYEIGDRVLNGKIETYSCKKAGSDKRLAKSLELYYQQEIEAAADLLG-------------------------------------------------------------------------------------------SSPLGPIAAPATRKLLINLISTMNASFPDYDFSAVKPEQFRKEPDFRIALQRINHDLAELLEAEGNGFVEKMWEAIAEA--IKLDECDVYSYIPDMDSDPFSDGNLWSFNYFFYNKVQKKVLYFTCLCK 191
[Close]
BLAST of NO27G01570 vs. NCBI_GenBank
Match: ETI56979.1 (hypothetical protein, variant 4 [Phytophthora parasitica P1569] >ETK96762.1 hypothetical protein, variant 2 [Phytophthora parasitica] >ETL50112.1 hypothetical protein, variant 2 [Phytophthora parasitica] >ETM03171.1 hypothetical protein, variant 2 [Phytophthora parasitica] >ETM56434.1 hypothetical protein, variant 2 [Phytophthora parasitica] >ETO85739.1 hypothetical protein, variant 2 [Phytophthora parasitica P1976] >ETP26773.1 hypothetical protein, variant 2 [Phytophthora parasitica CJ01A1] >ETP54744.1 hypothetical protein, variant 4 [Phytophthora parasitica P10297])

HSP 1 Score: 160.2 bits (404), Expect = 1.000e-35
Identity = 97/284 (34.15%), Postives = 135/284 (47.54%), Query Frame = 0 
Query:    1 MKFLDFERLGLLSAALANKHVGDKVLMGRIEAYSCKPLSDDKRIKKELE----SDLGGSNGALGATGGGLAGSLPTTHHLHXXXXXXXXXXXXINAGLCQSSVPPSLPSSFTSSISRIPPSGSGFRAGSMPTGFSXXXXXXXXXXXXXXXXXXXXSSPLGDLSDSATRKLLVYLISTLNAAFPDYDFSGVRSEQFLKEPDLRLVMSDVNRHLTELGDAVPPTFLEEMWAAIDEALGVTLKDCEIYSYLPDMEGDPFS-YNLWSFNYFFVNRRMKRIVFFSCIVK 280
            MK+L+  +L  L++ L +  +GD+VL G+IE YSCK    DKR+ K LE     ++  +   LG                                                                                           SSPLG ++  ATRKLL+ LIST+NA+FPDYDFS V+ EQF KEPD R+ +  +N  L EL +A    F+E+MW AI EA  + L +C++YSY+PDM+ DPFS  NLWSFNYFF N+  K++++F+C+ K
Sbjct:    1 MKYLEEPQLSWLNSVLGSYEIGDRVLNGKIETYSCKKAGSDKRLAKSLELYYQQEIEAAADLLG-------------------------------------------------------------------------------------------SSPLGPIAAPATRKLLINLISTMNASFPDYDFSAVKPEQFRKEPDFRIALQRINHDLAELLEAEGNGFVEKMWEAIAEA--IKLDECDVYSYIPDMDSDPFSDGNLWSFNYFFYNKVQKKVLYFTCLCK 191
[Close]
BLAST of NO27G01570 vs. NCBI_GenBank
Match: XP_008890182.1 (hypothetical protein, variant 5 [Phytophthora parasitica INRA-310] >ETI56980.1 hypothetical protein, variant 5 [Phytophthora parasitica P1569] >ETK96763.1 hypothetical protein, variant 3 [Phytophthora parasitica] >ETL50113.1 hypothetical protein, variant 3 [Phytophthora parasitica] >ETM03172.1 hypothetical protein, variant 3 [Phytophthora parasitica] >ETM56435.1 hypothetical protein, variant 3 [Phytophthora parasitica] >ETN24087.1 hypothetical protein, variant 5 [Phytophthora parasitica INRA-310] >ETO85740.1 hypothetical protein, variant 3 [Phytophthora parasitica P1976] >ETP26774.1 hypothetical protein, variant 3 [Phytophthora parasitica CJ01A1] >ETP54745.1 hypothetical protein, variant 5 [Phytophthora parasitica P10297])

HSP 1 Score: 160.2 bits (404), Expect = 1.000e-35
Identity = 97/284 (34.15%), Postives = 135/284 (47.54%), Query Frame = 0 
Query:    1 MKFLDFERLGLLSAALANKHVGDKVLMGRIEAYSCKPLSDDKRIKKELE----SDLGGSNGALGATGGGLAGSLPTTHHLHXXXXXXXXXXXXINAGLCQSSVPPSLPSSFTSSISRIPPSGSGFRAGSMPTGFSXXXXXXXXXXXXXXXXXXXXSSPLGDLSDSATRKLLVYLISTLNAAFPDYDFSGVRSEQFLKEPDLRLVMSDVNRHLTELGDAVPPTFLEEMWAAIDEALGVTLKDCEIYSYLPDMEGDPFS-YNLWSFNYFFVNRRMKRIVFFSCIVK 280
            MK+L+  +L  L++ L +  +GD+VL G+IE YSCK    DKR+ K LE     ++  +   LG                                                                                           SSPLG ++  ATRKLL+ LIST+NA+FPDYDFS V+ EQF KEPD R+ +  +N  L EL +A    F+E+MW AI EA  + L +C++YSY+PDM+ DPFS  NLWSFNYFF N+  K++++F+C+ K
Sbjct:    1 MKYLEEPQLSWLNSVLGSYEIGDRVLNGKIETYSCKKAGSDKRLAKSLELYYQQEIEAAADLLG-------------------------------------------------------------------------------------------SSPLGPIAAPATRKLLINLISTMNASFPDYDFSAVKPEQFRKEPDFRIALQRINHDLAELLEAEGNGFVEKMWEAIAEA--IKLDECDVYSYIPDMDSDPFSDGNLWSFNYFFYNKVQKKVLYFTCLCK 191
[Close]
BLAST of NO27G01570 vs. NCBI_GenBank
Match: XP_008890183.1 (hypothetical protein, variant 2 [Phytophthora parasitica INRA-310] >ETN24084.1 hypothetical protein, variant 2 [Phytophthora parasitica INRA-310])

HSP 1 Score: 160.2 bits (404), Expect = 1.000e-35
Identity = 97/284 (34.15%), Postives = 135/284 (47.54%), Query Frame = 0 
Query:    1 MKFLDFERLGLLSAALANKHVGDKVLMGRIEAYSCKPLSDDKRIKKELE----SDLGGSNGALGATGGGLAGSLPTTHHLHXXXXXXXXXXXXINAGLCQSSVPPSLPSSFTSSISRIPPSGSGFRAGSMPTGFSXXXXXXXXXXXXXXXXXXXXSSPLGDLSDSATRKLLVYLISTLNAAFPDYDFSGVRSEQFLKEPDLRLVMSDVNRHLTELGDAVPPTFLEEMWAAIDEALGVTLKDCEIYSYLPDMEGDPFS-YNLWSFNYFFVNRRMKRIVFFSCIVK 280
            MK+L+  +L  L++ L +  +GD+VL G+IE YSCK    DKR+ K LE     ++  +   LG                                                                                           SSPLG ++  ATRKLL+ LIST+NA+FPDYDFS V+ EQF KEPD R+ +  +N  L EL +A    F+E+MW AI EA  + L +C++YSY+PDM+ DPFS  NLWSFNYFF N+  K++++F+C+ K
Sbjct:    1 MKYLEEPQLSWLNSVLGSYEIGDRVLNGKIETYSCKKAGSDKRLAKSLELYYQQEIEAAADLLG-------------------------------------------------------------------------------------------SSPLGPIAAPATRKLLINLISTMNASFPDYDFSAVKPEQFRKEPDFRIALQRINHDLAELLEAEGNGFVEKMWEAIAEA--IKLDECDVYSYIPDMDSDPFSDGNLWSFNYFFYNKVQKKVLYFTCLCK 191
[Close]
BLAST of NO27G01570 vs. NCBI_GenBank
Match: XP_008890184.1 (hypothetical protein, variant 3 [Phytophthora parasitica INRA-310] >ETN24085.1 hypothetical protein, variant 3 [Phytophthora parasitica INRA-310])

HSP 1 Score: 160.2 bits (404), Expect = 1.000e-35
Identity = 97/284 (34.15%), Postives = 135/284 (47.54%), Query Frame = 0 
Query:    1 MKFLDFERLGLLSAALANKHVGDKVLMGRIEAYSCKPLSDDKRIKKELE----SDLGGSNGALGATGGGLAGSLPTTHHLHXXXXXXXXXXXXINAGLCQSSVPPSLPSSFTSSISRIPPSGSGFRAGSMPTGFSXXXXXXXXXXXXXXXXXXXXSSPLGDLSDSATRKLLVYLISTLNAAFPDYDFSGVRSEQFLKEPDLRLVMSDVNRHLTELGDAVPPTFLEEMWAAIDEALGVTLKDCEIYSYLPDMEGDPFS-YNLWSFNYFFVNRRMKRIVFFSCIVK 280
            MK+L+  +L  L++ L +  +GD+VL G+IE YSCK    DKR+ K LE     ++  +   LG                                                                                           SSPLG ++  ATRKLL+ LIST+NA+FPDYDFS V+ EQF KEPD R+ +  +N  L EL +A    F+E+MW AI EA  + L +C++YSY+PDM+ DPFS  NLWSFNYFF N+  K++++F+C+ K
Sbjct:    1 MKYLEEPQLSWLNSVLGSYEIGDRVLNGKIETYSCKKAGSDKRLAKSLELYYQQEIEAAADLLG-------------------------------------------------------------------------------------------SSPLGPIAAPATRKLLINLISTMNASFPDYDFSAVKPEQFRKEPDFRIALQRINHDLAELLEAEGNGFVEKMWEAIAEA--IKLDECDVYSYIPDMDSDPFSDGNLWSFNYFFYNKVQKKVLYFTCLCK 191
[Close]
BLAST of NO27G01570 vs. NCBI_GenBank
Match: XP_008890185.1 (hypothetical protein, variant 4 [Phytophthora parasitica INRA-310] >ETN24086.1 hypothetical protein, variant 4 [Phytophthora parasitica INRA-310])

HSP 1 Score: 160.2 bits (404), Expect = 1.000e-35
Identity = 97/284 (34.15%), Postives = 135/284 (47.54%), Query Frame = 0 
Query:    1 MKFLDFERLGLLSAALANKHVGDKVLMGRIEAYSCKPLSDDKRIKKELE----SDLGGSNGALGATGGGLAGSLPTTHHLHXXXXXXXXXXXXINAGLCQSSVPPSLPSSFTSSISRIPPSGSGFRAGSMPTGFSXXXXXXXXXXXXXXXXXXXXSSPLGDLSDSATRKLLVYLISTLNAAFPDYDFSGVRSEQFLKEPDLRLVMSDVNRHLTELGDAVPPTFLEEMWAAIDEALGVTLKDCEIYSYLPDMEGDPFS-YNLWSFNYFFVNRRMKRIVFFSCIVK 280
            MK+L+  +L  L++ L +  +GD+VL G+IE YSCK    DKR+ K LE     ++  +   LG                                                                                           SSPLG ++  ATRKLL+ LIST+NA+FPDYDFS V+ EQF KEPD R+ +  +N  L EL +A    F+E+MW AI EA  + L +C++YSY+PDM+ DPFS  NLWSFNYFF N+  K++++F+C+ K
Sbjct:    1 MKYLEEPQLSWLNSVLGSYEIGDRVLNGKIETYSCKKAGSDKRLAKSLELYYQQEIEAAADLLG-------------------------------------------------------------------------------------------SSPLGPIAAPATRKLLINLISTMNASFPDYDFSAVKPEQFRKEPDFRIALQRINHDLAELLEAEGNGFVEKMWEAIAEA--IKLDECDVYSYIPDMDSDPFSDGNLWSFNYFFYNKVQKKVLYFTCLCK 191
[Close]
BLAST of NO27G01570 vs. NCBI_GenBank
Match: GAY03231.1 (Hypothetical protein PINS_011058 [Pythium insidiosum])

HSP 1 Score: 159.8 bits (403), Expect = 1.300e-35
Identity = 97/280 (34.64%), Postives = 141/280 (50.36%), Query Frame = 0 
Query:    1 MKFLDFERLGLLSAALANKHVGDKVLMGRIEAYSCKPLSDDKRIKKELESDLGGSNGALGATGGGLAGSLPTTHHLHXXXXXXXXXXXXINAGLCQSSVPPSLPSSFTSSISRIPPSGSGFRAGSMPTGFSXXXXXXXXXXXXXXXXXXXXSSPLGDLSDSATRKLLVYLISTLNAAFPDYDFSGVRSEQFLKEPDLRLVMSDVNRHLTELGDAVPPTFLEEMWAAIDEALGVTLKDCEIYSYLPDMEGDPFS-YNLWSFNYFFVNRRMKRIVFFSCIVK 280
            MK+L+  +L  L++ L++  VGD+V+ G++EAYSCK    DK++ K L+        A+                                     +++PP L +  +                                           SSPLG L+ S+TRKLL+ LI+T+NA+FPDYDFS +R EQF KEPD R+ +  +N  L EL  A    F E+MW +I E+  +   +CE+YSY+PDM+ DPFS  NLWSFNYFF N+ MK+I++F+C+ K
Sbjct:    1 MKYLEENQLTWLNSVLSSYVVGDRVIAGKVEAYSCKKAGADKKLAKSLDLFYQQELEAMALAS--------------------------------DATLPPQLYAPLS-------------------------------------------SSPLGPLTASSTRKLLINLITTMNASFPDYDFSTLRPEQFTKEPDYRIAIQRINHDLAELLXAEQNGFGEKMWESIAES--IKPDECEVYSYIPDMDSDPFSDGNLWSFNYFFYNKNMKKILYFTCMAK 203
The following BLAST results are available for this feature:
BLAST of NO27G01570 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_009041821.17.600e-3635.71hypothetical protein AURANDRAFT_33964 [Aureococcus... [more]
XP_002997140.17.600e-3633.79conserved hypothetical protein [Phytophthora infes... [more]
ETI56977.11.000e-3534.15hypothetical protein, variant 2 [Phytophthora para... [more]
ETI56978.11.000e-3534.15hypothetical protein, variant 3 [Phytophthora para... [more]
ETI56979.11.000e-3534.15hypothetical protein, variant 4 [Phytophthora para... [more]
XP_008890182.11.000e-3534.15hypothetical protein, variant 5 [Phytophthora para... [more]
XP_008890183.11.000e-3534.15hypothetical protein, variant 2 [Phytophthora para... [more]
XP_008890184.11.000e-3534.15hypothetical protein, variant 3 [Phytophthora para... [more]
XP_008890185.11.000e-3534.15hypothetical protein, variant 4 [Phytophthora para... [more]
GAY03231.11.300e-3534.64Hypothetical protein PINS_011058 [Pythium insidios... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR061ncniR061Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR103ngnoR103Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO27G01570.1NO27G01570.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO27G01570.2NO27G01570.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|306082gene_9924Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_101669g1gene9843Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO27G01570.1NO27G01570.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO27G01570.2NO27G01570.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO27G01570 ID=NO27G01570|Name=NO27G01570|organism=Nannochloropsis oceanica|type=gene|length=4845bp
ATTGGAATACGCCTCTCTGGTCATACTTTCTAGGACTTTTTTGGATCTCC
AAGTCTGATCTTGCTCCTGCTCGCTCGCTCGCGCTCTCGATGAGTTTATT
CCTAGTCTAGACTTGACGGCTTGATGGCACTTGAGACATTCCACGTGTAT
GTATGTGGCATGAGTGCGTCTCTGGCTGTAAAGTTGCCTTGGGTGGGAGG
CTTGACTTTCCACTCCCTCTCCTCCGCCCCTGGCAAGTCAAAACACGAAC
ACAGCAACCGAGAAGCAGCACCTGCACATGCGTGACACATTCCCTTCTGC
TTGAATCCCCGCTTACTGGGGTCCTGCCTGAGTTCCTGCCGTGCCACTCA
CCCTGTGGCAGCTTTGCCACGACTCTCATCCTCATCAGTGTCATCACCAC
CATAATGAGCAGCATTTGCAGCAGCAGCAGAGCAGCAAGCGAATCGTGGT
AATTCGGGTCATCACCTAACGAAGGGGTGCACTCAGCTTGCACATGCAAC
TCCATATGGCCCTTTGGGAAACCGTCACGACCTACATTGCTTGCTTGCCA
CATTCATGCCACACCCATAGAGGGAAAGAGACGGGAAAAAGCCACCCCAT
GCCCTCGACATTAATAACTGCAGCCACGCCATGCCCATGAGCGGCGCGAG
CCCGACATATACTCAATCCCCAGGGGGGGGAATCTCCCTCCCTTCCCTCT
CCCCATGCTGACCCCTTCCTCCCTCACACTCCCTCCCTCGACACAGCAAT
AATTGAGTACTTAGGTCACGGTCAAGACCTTGCCACCTTCGCCGCCCTGT
CCTGCCCTTCCCTCTTCCCGCCCCTGCTCATCCCTCCACCTCATCAATCA
TCGAGGAAACGGAGGCATGAAATTTTTGGACTTTGAGCGCCTGGGGCTAC
TCAGTGCCGCCTTGGCCAACAAGCACGTGGGTGACAAAGTGTTAATGGGA
AGGATAGAAGCTTACTCCTgtaagtcctccctcccctcctccatcccttc
ctccctcccttcctccctccttccctccgtttgagaaaagagcgcctctt
ttgaaagccctttctcatctccctcctcccttccttccatcctccctccc
tcccttccttccttcatccctccctcctcctcgcagGCAAGCCCCTCTCG
GACGACAAGAGGATAAAAAAAGAATTAGAAAGCGACCTAGGAGgtaggga
gggaaggtgggagggaaagaggaaggcaaggagggaggcgcaaacgtcac
ggagcctattctcacctctgtatattctcccaccctccctccctccctcc
ctccttccctccctccctccccccctccctcaccacagGTAGTAACGGTG
CTCTGGGTGCCACCGGAGGCGGCCTCGCTGGCTCCCTCCCTACCACTCAC
CACCTCCACAGCAGCAACAGCAGCAGCTGCAGCAACAGCAACAGCATCAA
TGCTGGCTTATGTCAATCCTCTGTCCCTCCTTCCCTCCCTTCCTCCTTCA
CTTCCTCCATTTCCAGAATACCCCCATCGGGCTCCGGCTTTCGgtacgtc
ccccacctccctccctccctccctccctccccccttccctccctccctcc
ctccctccctgcctttccccacttttttccgtcctagccatagctcacat
ccatcctccctccctccctccctccccccttccctccctccctccctccc
tccatccccagCGCGGGTTCCATGCCCACCGGTTTTTCGTCCGCTGCTGG
AGGGGCTTCCTCCCTCTTCCTCTCCTCTTCCTCCGCCGGCACCTCGGCCT
CCTCCCCCCTTGGTGACCTGTCCGATTCCGCGACGCGCAAGgtggggagg
gagggagggagggggggagggagggagggagggagggaagtaatggatgc
aattggaggtgtaagtgaaacgaatcaatcctaaccctgtctcgcattgc
ttccctccctcccttcctccctccctccctccctccctccctccctcccc
ccctccctccctccctccctccctccagCTCTTGGTCTACCTCATCTCGA
CCCTCAACGCCGCCTTTCCAGACTACGACTTCAGgtaccctccctctctc
cctccctccctcctttctccctttctccctccctccctccctcccttctt
tctttcttccttttctccctcccatcaatgttcccaacaccctcttttgg
cctcattccccccctccctccgtcactcactccctctctccctccctacc
tccctccctccctttcttcttctcttccactctctcttttctttcccgta
tcaatcaacctcaccccccttcctccctacctacctccctccctccctcc
ctcccttcctcctagCGGCGTGCGGTCTGAGCAATTCTTGAAGGAGCCAG
ATCTACGACTGgtgcgtttcttgaacgagggagggaaagagggagagagg
gagggtaggaagaggtgtgtgtcgagaaggggggagggagggagggaggg
agggagtgaaggaggatgggaagcaggaggtatgtgtcgagaagggaatg
gcgtttgggatgaagcttcttctttagcgtgtacttaccgatcgccgccc
ttcctccctccttccctccctccctccctccctccctccctccctccctc
cctcccttcctagGTCATGAGCGATGTCAACCGCCACTTGACGGAGCTGG
GGGATGCCGTGCCGCCTACGTTCCTCGAGgtagggagggagggagggagg
gagggagggagggagggagggaggaaagatggaacggcgttgtgtaagtt
cagaagggtatctctccttccctccctcccccccccttccctccctcctt
ccctcccccgccatcgatgaagctcgaagcaggacgttcaaactcccccc
tccctccctccctccctccctccttccctcagGAAATGTGGGCTGCCATC
GACGAGGCTCTTGGCGTGACGCTCAAGGACTGCGAGATCTACTCCTACCT
CCCTGATATGGAGGGCGATCCTTTCTCCTACAACTTgtgtgtaccctccc
ctccctccagccctcccgccctccctccctctcgccctccctcccgccct
ccctccctcccttcctccttttcttgtttgttcgatgggagagtcaacgt
ttagcacggagattttctctactgtacacccgtcatcccttcctccttcc
ctcccttcttcccttgcttccctccgacgactggataactgacactcccc
ttccttccctccctccctcccgccctttacccctccctcactaccttcgc
agGTGGTCCTTCAACTATTTCTTTGTCAATCGACGCATGAAGAGGATCGT
CTTCTTTAGCTGTATTGTCAAGAGGTGCGAAAGAGAGGGAGGGAGGGAAG
AAGGGAGGGCAAGAACTCTCATAGCGAACTTGGATCAAGTGAAACGATAG
ATCGCGAAGGAGGAAGGAGGGTCCGACTCTGACAAGGATGAGATCAACTC
CCTCCCTCTCTCACACTCTCTCCCTCCTTCCCTTCCTCGATCCCTCCCTC
CCACTGCAGCAAATACCAGGCCTCGATGGAGGAGGGGGGGGACGATACGG
ACATGGGCGAGGATGTGGCTATGGTGAGGGATAGCGACGACGAGCAGTAC
TGGGTTGAGGACATCTAAACACTGCTAAGAAAATAAAACATGAGACGACG
GAAGCGCTGAGGAGAGAAGCAGAAGAGAAAAGAGAAGAGGATGAAGAAGA
AGAAGAAGAAGAAGAAAAAGAAGAAGAGGAAGAAAAAAAAAAAGAATATT
ACGCTGCTGGAAGATAAGGAAAGGGACGATAGCGACAGTCAAAGACACAG
AGAAAAGGAACGAATGCCAGGGATGTGAACGTGTGGTGTATGTACATCTA
TATATGTGTGTGTGTGTGAGAGAGAGAGAGGGCGCAAACGTCCCATACAT
AGGCTTGTAGATGTTTGTGCCTGAATGGAGAGGTCGATGCACGTGTAAAT
GACCGCAGCGCGCCTCGAAAGGACGAGCGAGAGGAGCCATGCACACGTCC
GTCTGTATATGTATTCACGAGTCTGTGTGTGTGTGTCTGCTGCGTACAAC
GGCGGAATCGACGCGATGGCAGAGCTCTCTGGGTGCCACGGCACCGTACC
ACTTACAAGATGATTTCAACTGCGTGTGAGTGTATGAAACCGGAGAGGGG
GGCATGTATGTGTGTTCTGTGCCTGTGTCTATGTCTGTCTGTTTTTGAGT
GTGTGTGCAGCGATCTTGTAAGGATGTCGGTGTGGGGTTGTGTGTGTATG
TGTCTTGTGAGAGAAGACACACCAGAAACAAACACGCACACATAATGAAA
AGGGAATCGAAATGAAATAGCCGCGAACAACAACCAACAAAAGAAAGGGG
GGAATAGCGAGCAACCGGGCAAAGCAGGTGTAAGTGTGCGTGTGTCAGAC
ATGTTAAGATGACACGAGCCTCTGTGCACCGACGAAGAGGCAGGCCGCCA
AACCGGAAATAGAATCTTACAGCACACTGTTGAAAGGTGCCGATCGAAAC
TAAAGACAGAGCGGGAGAAGAAGAAGACCTCTTAAACGGTAGAAGTCTGT
GTGTAAGTGTGCGCGCCTGTATCTGGTCTTGGTGTCTGTGGAGATCAAAG
GAAGAAACAAATTGAATGGGTTCCAAAACGACCAGAAAGAGATAACAAAA
CACAATGGAGGGTGGGACGGCATTCTCACCCTCATGCGCATATCCAGCTT
ATCCACAAACGAAATCCTTGACAGAGAGAAAGAGAAAAAGAAACGAAGAA
TGAAGGAAGCTTCAAGCATCATACGGAATAGAGGAAGGTTCGGGG
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protein sequence of NO27G01570.1

>NO27G01570.1-protein ID=NO27G01570.1-protein|Name=NO27G01570.1|organism=Nannochloropsis oceanica|type=polypeptide|length=316bp
MKFLDFERLGLLSAALANKHVGDKVLMGRIEAYSCKPLSDDKRIKKELES
DLGGSNGALGATGGGLAGSLPTTHHLHSSNSSSCSNSNSINAGLCQSSVP
PSLPSSFTSSISRIPPSGSGFRAGSMPTGFSSAAGGASSLFLSSSSAGTS
ASSPLGDLSDSATRKLLVYLISTLNAAFPDYDFSGVRSEQFLKEPDLRLV
MSDVNRHLTELGDAVPPTFLEEMWAAIDEALGVTLKDCEIYSYLPDMEGD
PFSYNLWSFNYFFVNRRMKRIVFFSCIVKSKYQASMEEGGDDTDMGEDVA
MVRDSDDEQYWVEDI*
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protein sequence of NO27G01570.2

>NO27G01570.2-protein ID=NO27G01570.2-protein|Name=NO27G01570.2|organism=Nannochloropsis oceanica|type=polypeptide|length=305bp
MKFLDFERLGLLSAALANKHVGDKVLMGRIEAYSCKPLSDDKRIKKELES
DLGGSNGALGATGGGLAGSLPTTHHLHSSNSSSCSNSNSINAGLCQSSVP
PSLPSSFTSSISRIPPSGSGFRAGSMPTGFSSAAGGASSLFLSSSSAGTS
ASSPLGDLSDSATRKLLVYLISTLNAAFPDYDFSGVRSEQFLKEPDLRLV
MSDVNRHLTELGDAVPPTFLEEMWAAIDEALGVTLKDCEIYSYLPDMEGD
PFSYNLWSFNYFFVNRRMKRIVFFSCIVKRCEREGGREEGRARTLIANLD
QVKR*
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