NO27G01540, NO27G01540 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO27G01540 vs. NCBI_GenBank
Match: XP_005855792.1 (cobalamin synthesis protein p47k [Nannochloropsis gaditana CCMP526] >EKU20568.1 cobalamin synthesis protein p47k [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 747.7 bits (1929), Expect = 4.400e-212 Identity = 413/745 (55.44%), Postives = 508/745 (68.19%), Query Frame = 0 Query: 170 PPYVVEYGLQVHQGVWYVASTKPRSHESFLEAASRALEEAT-GEDGGKEEVDCGGEDDDTVCVARPSPQSFQLAAHLPRITELHRPAEAADGNTHAYHFFIATTEVGSCETEEDR----------DSKGDSGSSDNSSVFSNTTIALNATSTTAPSAGRAIVWKTREQVRACRSTKQGLHAFPLVDQTRNLLETALRTGGGVLSGPGWDELHEYL------TSDNHKGGHSHNHVQTNASVEALLHQASLIKRPDILPVTLLSGFLGAGKTTLLKHILNNQQNWRVAVLVNDMNELNIDAALVSQD-RQRVQVVGKVQEEERIVSMANGCICCTLREDLLAQIVDLAQEEEFDYLLIESSGISEPLAVAETFTFEDEHGRSLSSLARLDTTVTVVDAPDLHRHLRARERVAASKEREVCPISMGEEDDKTLADLMCEQIEFADVVILNKIDLLPAVGAVDSPVTVSSTGSFSKTPITSLSALRALIHTLNPGAKVLSAEHGRVDVREILNTGLFSLEKAQQAPGWLRGLRGGSNSSMAPRVPETLEYGVSSFCYRRSRPFHPERLHSLIFGAEGCECSDGDKVSSEGCLISHVGRDISGDRKAEPWPLLQGTGVHQSSGSAQLHPLQSLVRVKGYLWLATQMQQMVFWSLAGAVHSFTSRDYDRWLCATDPVEWPETLTLTQLQANWAPVWGDRRQEVVLIGVQMDQAAVEKALDACLLTDKELVRM-PWEWAETFVDPFFPSGT 896 PPY VEYGL+ H GVWYVAST PRSHESFLE A+RALEEA GE EV+ +++DT+C P +SFQLA HLP ITELHRP E+ D THAYHF+IA E E + S G SSD+ SV S TI A TT + A++WK+R +V+ CR +QG HAFPLVDQ RNLLET LRTGGG+L+GPGWD L E+ + + ++ A+V++LL + SL++RP++LPVTLLSGFLGAGKTTLL+H+L+ Q W+VAVLVNDMNELNIDA L++QD R+RV+VVGK EERIVS++NGCICCTLREDLLAQIVDLA FDYL+IESSGISEP+AVAETFTFEDEHGRSLSSLARLDTTVTVVDA DL RHL+A E+ + + + G ++K+LA+LM EQIEFADV++LNK+DLL + A+ S + + + SL L + + LNP AK++ AEHGRVD ++L+T FS+EKAQ APGWL+ LRG ++PET E+GV+SFCYRR RPFHP RLH+L+FG EG G D+ SL+RVKGYLWLAT MQ MVFWSLAG+VHSFT+ + ++WL A DPVEWPETLT +L+A+W PVWGDRRQE+V IGV M+QA VE+ALDACLLT++E+ RM P +WAE FVDPF GT Sbjct: 19 PPYTVEYGLKSHCGVWYVASTSPRSHESFLETAARALEEAVEGEHAIGREVE--EDEEDTICEGYPCRRSFQLAVHLPCITELHRPKESGDEKTHAYHFYIALAPAQITEAEGQKTTCSLTQAASGSCGSGNSSDDGSVVSTPTIETTALETTHDAT--ALLWKSRREVKVCRHEEQGKHAFPLVDQARNLLETGLRTGGGILAGPGWDALREFFQEGATDRDEEIAQPAGVSDPRSIATVQSLLQKISLLERPEVLPVTLLSGFLGAGKTTLLRHVLSQQAGWKVAVLVNDMNELNIDATLITQDRRRRVEVVGKPLSEERIVSLSNGCICCTLREDLLAQIVDLALTTTFDYLMIESSGISEPMAVAETFTFEDEHGRSLSSLARLDTTVTVVDAADLPRHLQAWEKASTEEGGDQACALGGTGEEKSLAELMVEQIEFADVIVLNKVDLLASPAALASNGVGGNPSLPRGSFLWSLPVLISALQKLNPRAKIVVAEHGRVDPAQVLHTQAFSMEKAQAAPGWLQTLRG-------TKMPETDEFGVTSFCYRRRRPFHPARLHALLFG--------------EG------GEDVXXXXXXXXXXXXXXXXXXXXXXG-------SLIRVKGYLWLATHMQHMVFWSLAGSVHSFTANEEEKWLAAIDPVEWPETLTAAELRAHWEPVWGDRRQEIVFIGVHMEQAKVEEALDACLLTEEEMTRMTPGDWAEVFVDPFVREGT 725
BLAST of NO27G01540 vs. NCBI_GenBank
Match: WP_015768670.1 (GTP-binding protein [Candidatus Accumulibacter phosphatis] >ACV37509.1 cobalamin synthesis protein P47K [Candidatus Accumulibacter phosphatis clade IIA str. UW-1]) HSP 1 Score: 353.6 bits (906), Expect = 1.800e-93 Identity = 212/488 (43.44%), Postives = 278/488 (56.97%), Query Frame = 0 Query: 405 RPDILPVTLLSGFLGAGKTTLLKHILNNQQNWRVAVLVNDMNELNIDAALVSQDRQRVQVVGKVQEEERIVSMANGCICCTLREDLLAQIVDLAQEEEFDYLLIESSGISEPLAVAETFTFEDEHGRSLSSLARLDTTVTVVDAPDLHRHLRARERVAASKEREVCPISMGEEDDKTLADLMCEQIEFADVVILNKIDLLPAVGAVDSPVTVSSTGSFSKTPITSLSALRALIHTLNPGAKVLSAEHGRVDVREILNTGLFSLEKAQQAPGWLRGLRGGSNSSMAPRVPETLEYGVSSFCYRRSRPFHPERLHSLIFGAEGCECSDGDKVSSEGCLISHVGRDISGDRKAEPWPLLQGTGVHQSSGSAQLHPLQSLVRVKGYLWLATQMQQMVFWSLAGAVHSFTSRDY-DRWLCATDPVEWPETLTLTQLQAN-WAPVWGDRRQEVVLIGVQMDQAAVEKALDACLLTDKELVRMPWEWAETFVDPF 891 R LPVT+LSGFLGAGKTTLL H+LNN+Q RVAV+VNDM+E+NIDA LV++ R+ + EE++V M+NGCICCTLREDLL +I LA+EE FDYLLIES+GISEPL VAETFTF DE G SLS ++RLDT VTVVD + +++ +A E S+GE D++T+ +L+ EQ+EF DV++LNKIDLLPA L+ L A++ TLNP A ++ A G++ + ILNTG F E+A QAPGWL+ LRG +PET EYG+SSF YR RPFHP R H I + WP ++R KGY WLAT+ + WS AG V T + W A +WP+ ++ + W +GD +QE+V+IG++MD++A+ A DACLL+D ELV P W + DPF Sbjct: 8 RDSRLPVTVLSGFLGAGKTTLLNHVLNNRQGQRVAVIVNDMSEVNIDARLVAEGGARLS-----RAEEKMVEMSNGCICCTLREDLLIEIARLAKEERFDYLLIESTGISEPLPVAETFTFRDEDGTSLSDISRLDTMVTVVDGFNFLNDYSSQDYIADRGE------SLGEGDERTVVNLLVEQVEFCDVIVLNKIDLLPA---------------------EDLARLEAILRTLNPRADIVQACFGQMPLERILNTGRFDFERAAQAPGWLQELRG-------EHIPETAEYGISSFVYRARRPFHPARFHEWI---------------------------------NQEWP--------------------GVIRSKGYFWLATRPGLVGSWSQAGPV---TRHEVGGLWWVAVPETDWPQDEEGRRIILDRWLEPYGDAQQELVMIGIEMDESALRHAFDACLLSDTELVAGPEAWVR-YEDPF 399
BLAST of NO27G01540 vs. NCBI_GenBank
Match: WP_081760348.1 (MULTISPECIES: GTP-binding protein [Bordetella] >OZI80038.1 hypothetical protein CAL24_09050 [Bordetella genomosp. 2]) HSP 1 Score: 352.8 bits (904), Expect = 3.200e-93 Identity = 219/498 (43.98%), Postives = 284/498 (57.03%), Query Frame = 0 Query: 396 LLHQASLIKRPDILPVTLLSGFLGAGKTTLLKHILNNQQNWRVAVLVNDMNELNIDAALVSQDRQRVQVVGKVQEEERIVSMANGCICCTLREDLLAQIVDLAQEEEFDYLLIESSGISEPLAVAETFTFEDEHGRSLSSLARLDTTVTVVDAPDLHRHLRARERVAASKEREVCPISMGEEDDKTLADLMCEQIEFADVVILNKIDLLPAVGAVDSPVTVSSTGSFSKTPITSLSALRALIHTLNPGAKVLSAEHGRVDVREILNTGLFSLEKAQQAPGWLRGLRGGSNSSMAPRVPETLEYGVSSFCYRRSRPFHPERLHSLIFGAEGCECSDGDKVSSEGCLISHVGRDISGDRKAEPWPLLQGTGVHQSSGSAQLHPLQSLVRVKGYLWLATQMQQMVFWSLAGAV--HSFTSRDYDRWLCATDPVEWP-ETLTLTQLQANWAPVWGDRRQEVVLIGVQMDQAAVEKALDACLLTDKELVRMPWEWAETFVDPF 891 LLH A+ D LPVT+LSGFLGAGKTTLL HILNN++ RVAV+VNDM+E+NIDA LV Q + + EE++V M+NGCICCTLREDLL ++ LA+E +FD L+IES+GISEPL VAETFTF DE GR LS +ARLDT VTVVDA + R + + + A E S+G D++T+ DL+ EQ+EF DV++LNKIDL+ A GA + L A++ LNP A++++AE GRV + ++L+TGLF E+A QAPGWL+ LRG +PET EYG+ SF YR RPFHP R H+LI WP +VR KG+ WLA++ WS AG V H RW A +WP + T+ +++A W GD RQE+VLIG+ MDQAA+ LD CLL D E+ + P W+ T+ DPF Sbjct: 28 LLHSAA-SHTMDKLPVTVLSGFLGAGKTTLLNHILNNREGRRVAVIVNDMSEVNIDADLVRQGGAELS-----RTEEKLVEMSNGCICCTLREDLLLEVSRLAREGKFDQLVIESTGISEPLPVAETFTFADETGRGLSDVARLDTMVTVVDAYNFLRDYSSYDSLQARGE------SLGAADERTVVDLLVEQVEFCDVIVLNKIDLVEA-GARE--------------------RLAAMLGRLNPRARIVAAEFGRVPLDQLLDTGLFDFEQAAQAPGWLKELRG-------EHLPETQEYGIDSFVYRARRPFHPARFHALI---------------------------------ESDWP--------------------GVVRSKGFFWLASRPALAGSWSQAGGVCRHGLAG----RWWAAVPAEQWPRDAETVARIRAKWHEETGDARQELVLIGMGMDQAALRARLDRCLLDDAEMAQGPAAWS-TYPDPF 427
BLAST of NO27G01540 vs. NCBI_GenBank
Match: WP_002617667.1 (GTP-binding protein [Stigmatella aurantiaca] >EAU63472.1 CobW [Stigmatella aurantiaca DW4/3-1] >ADO73818.1 Cobalamin (vitamin B12) biosynthesis CobW-like protein [Stigmatella aurantiaca DW4/3-1]) HSP 1 Score: 352.4 bits (903), Expect = 4.100e-93 Identity = 208/485 (42.89%), Postives = 281/485 (57.94%), Query Frame = 0 Query: 409 LPVTLLSGFLGAGKTTLLKHILNNQQNWRVAVLVNDMNELNIDAALVSQDRQRVQVVGKVQEEERIVSMANGCICCTLREDLLAQIVDLAQEEEFDYLLIESSGISEPLAVAETFTFEDEHGRSLSSLARLDTTVTVVDAPDLHRHLRARERVAASKEREVCPISMGEEDDKTLADLMCEQIEFADVVILNKIDLLPAVGAVDSPVTVSSTGSFSKTPITSLSALRALIHTLNPGAKVLSAEHGRVDVREILNTGLFSLEKAQQAPGWLRGLRGGSNSSMAPRVPETLEYGVSSFCYRRSRPFHPERLHSLIFGAEGCECSDGDKVSSEGCLISHVGRDISGDRKAEPWPLLQGTGVHQSSGSAQLHPLQSLVRVKGYLWLATQMQQMVFWSLAGAVHSFTSRDYDRWLCATDPVEWPETLTL-TQLQANWAPVWGDRRQEVVLIGVQMDQAAVEKALDACLLTDKELVRMPWEWAETFVDPFFP 893 LPVT+LSGFLGAGKTTLL H+L N++ +VAV+VNDM+E+NIDA LV R + V +E++V M NGCICCTLREDLL ++ LA++ FDYLLIES+GISEPL VAETFTFE+E G+SLS +ARLDT VTVVDA + + + + + K + +G+ED++T+ADL+ EQ+EFA+V++L+K+DL+ + AV L A++ LNP A+++ AE G + + IL+T LF +EKA APGWL+ LRG VPET EYG+SSF YR RPFHP R +L++G ++ W + ++R KG+ WLAT+M WS AG+ S ++ W A EW E L Q++ W WGDRRQE+V IG +++ A+ + LDA LLTDKEL R P W + F DPF P Sbjct: 10 LPVTVLSGFLGAGKTTLLNHVLANREGRKVAVIVNDMSEVNIDARLVKGGRSALSRV-----DEKLVEMQNGCICCTLREDLLLEVARLARQNRFDYLLIESTGISEPLPVAETFTFEEEGGKSLSQVARLDTMVTVVDAKSFLQDWESEDDLRSRK------LGLGDEDERTVADLLVEQVEFANVLVLSKLDLISSEEAV---------------------RLEAMLRHLNPEARIVRAERGNLPLEAILDTRLFDMEKASLAPGWLKELRG-------EHVPETQEYGISSFVYRARRPFHPGRFWNLLYGG------------------------------SQVW--------------------KPVLRSKGFFWLATRMDDTGLWSHAGS--SASAGYAGTWFAALPQDEWAEDPELKAQVEKEWQEPWGDRRQEIVFIGAGLNEQALREKLDAALLTDKELARGPKAW-KRFRDPFAP 402
BLAST of NO27G01540 vs. NCBI_GenBank
Match: WP_038684185.1 (GTP-binding protein [Rubrobacter radiotolerans] >AHY46423.1 Putative GTPases (G3E family) [Rubrobacter radiotolerans] >SMC04583.1 GTPase, G3E family [Rubrobacter radiotolerans DSM 5868]) HSP 1 Score: 352.1 bits (902), Expect = 5.400e-93 Identity = 212/483 (43.89%), Postives = 274/483 (56.73%), Query Frame = 0 Query: 409 LPVTLLSGFLGAGKTTLLKHILNNQQNWRVAVLVNDMNELNIDAALVSQDRQRVQVVGKVQEEERIVSMANGCICCTLREDLLAQIVDLAQEEEFDYLLIESSGISEPLAVAETFTFEDEHGRSLSSLARLDTTVTVVDAPDLHRHLRARERVAASKEREVCPISMGEEDDKTLADLMCEQIEFADVVILNKIDLLPAVGAVDSPVTVSSTGSFSKTPITSLSALRALIHTLNPGAKVLSAEHGRVDVREILNTGLFSLEKAQQAPGWLRGLRGGSNSSMAPRVPETLEYGVSSFCYRRSRPFHPERLHSLIFGAEGCECSDGDKVSSEGCLISHVGRDISGDRKAEPWPLLQGTGVHQSSGSAQLHPLQSLVRVKGYLWLATQMQQMVFWSLAGAVHSFTSRDYDRWLCATDPVEWP-ETLTLTQLQANWAPVWGDRRQEVVLIGVQMDQAAVEKALDACLLTDKELVRMPWEWAETFVDPF 891 LPVT+LSGFLGAGKTTLL H+L N++ RVAV+VNDM+E+NIDA+LV+ +V EER+V M NGCICCTLREDLL ++ LA++ FDYLL+ES+GISEPL VAETFTF DE GRSLS LARLDT VTVVD+P + +A + ++ +++ EEDD+T+ DL+ EQ+EFADV++LNK DL+ + L I LNPGA+VL EHG V VRE+L TGLF E+A ++PGWLR LRG S VPET EYG+SSF +R RPFHPERL W L + + ++R KG+ WLA++ WS AG V F + W A EWP E +L ++ +W V+GDRRQE+V IG +D+ A+ ++L+ LLTD+EL W F DPF Sbjct: 13 LPVTVLSGFLGAGKTTLLNHVLANREGLRVAVIVNDMSEVNIDASLVASGASLNRV------EERLVEMTNGCICCTLREDLLVEVARLARDGRFDYLLVESTGISEPLPVAETFTFLDEEGRSLSDLARLDTLVTVVDSPQFLKEYQAADDLSGR------GLALSEEDDRTVTDLLVEQVEFADVILLNKCDLIEP---------------------EEVDVLEDAIRKLNPGARVLRTEHGVVPVREVLGTGLFDFERAAESPGWLRELRGES-------VPETEEYGISSFVFRARRPFHPERL----------------------------------------WDLAK-------------FQWKGVLRSKGFFWLASRRDVAFLWSQAGGVLRFEPSGF--WWAAAPREEWPSEQESLQEILESWDEVYGDRRQELVFIGQDLDREAMVRSLEDALLTDEELALGEAAW-PYFRDPF 399
BLAST of NO27G01540 vs. NCBI_GenBank
Match: WP_054429443.1 (MULTISPECIES: GTP-binding protein [Achromobacter] >CUJ79954.1 Uncharacterized GTP-binding protein YjiA [Achromobacter sp. 2789STDY5608628] >CUI68227.1 Uncharacterized GTP-binding protein YjiA [Achromobacter sp. 2789STDY5608633]) HSP 1 Score: 350.1 bits (897), Expect = 2.000e-92 Identity = 216/490 (44.08%), Postives = 277/490 (56.53%), Query Frame = 0 Query: 403 IKRPDI-LPVTLLSGFLGAGKTTLLKHILNNQQNWRVAVLVNDMNELNIDAALVSQDRQRVQVVGKVQEEERIVSMANGCICCTLREDLLAQIVDLAQEEEFDYLLIESSGISEPLAVAETFTFEDEHGRSLSSLARLDTTVTVVDAPDLHRHLRARERVAASKEREVCPISMGEEDDKTLADLMCEQIEFADVVILNKIDLLPAVGAVDSPVTVSSTGSFSKTPITSLSALRALIHTLNPGAKVLSAEHGRVDVREILNTGLFSLEKAQQAPGWLRGLRGGSNSSMAPRVPETLEYGVSSFCYRRSRPFHPERLHSLIFGAEGCECSDGDKVSSEGCLISHVGRDISGDRKAEPWPLLQGTGVHQSSGSAQLHPLQSLVRVKGYLWLATQMQQMVFWSLAGAVHSFTSRDYDRWLCATDPVEWPETL-TLTQLQANWAPVWGDRRQEVVLIGVQMDQAAVEKALDACLLTDKELVRMPWEWAETFVDPF 891 + RPD LPVT+LSGFLGAGKTTLL H+LNN++ RVAV+VNDM+++NIDA LV + + + +E++V M+NGCICCTLREDLL +I LA E FDYLLIES+GISEPL VAETFTF DE G SLS +ARLDT VTVVDA + R +++R+AA E ++GEED++T+ DL+ EQ+EF DV++LNK DL+ A L L A++ LNP A ++ E GRV + +L+TG F E+A QAPGWL+ LRG PET EYG+ SF +R RPFHP+RL D E WP +VR KGY WL T+ WS AG V + Y W A WPE + + ++ A+W P++GDR QE+VLIGV MDQAA+ L ACL+T +E+ R E A T DPF Sbjct: 14 LARPDARLPVTVLSGFLGAGKTTLLNHVLNNREGRRVAVIVNDMSDVNIDARLVREGGAALS-----RADEKLVEMSNGCICCTLREDLLIEIRRLAAEGRFDYLLIESTGISEPLPVAETFTFRDEDGLSLSDVARLDTMVTVVDAFNFLRDYASQDRLAARGE------TLGEEDERTVVDLLIEQVEFCDVMVLNKTDLIAA---------------------DELERLEAILRQLNPRADIVHGEFGRVPLARVLDTGRFDFEEAAQAPGWLKVLRG-------EHTPETEEYGIGSFVFRARRPFHPQRL---------------------------------WDCFHEEWP--------------------GVVRSKGYFWLVTRPAFAASWSQAGPVTRHGAAGY--WWAALPRERWPEDVESRARIVADWDPIYGDRCQELVLIGVGMDQAALTARLQACLMTQEEMTRPAIELA-TIRDPF 408
BLAST of NO27G01540 vs. NCBI_GenBank
Match: CUI49876.1 (Uncharacterized GTP-binding protein YjiA [Achromobacter sp. 2789STDY5608621]) HSP 1 Score: 349.4 bits (895), Expect = 3.500e-92 Identity = 216/488 (44.26%), Postives = 276/488 (56.56%), Query Frame = 0 Query: 405 RPDI-LPVTLLSGFLGAGKTTLLKHILNNQQNWRVAVLVNDMNELNIDAALVSQDRQRVQVVGKVQEEERIVSMANGCICCTLREDLLAQIVDLAQEEEFDYLLIESSGISEPLAVAETFTFEDEHGRSLSSLARLDTTVTVVDAPDLHRHLRARERVAASKEREVCPISMGEEDDKTLADLMCEQIEFADVVILNKIDLLPAVGAVDSPVTVSSTGSFSKTPITSLSALRALIHTLNPGAKVLSAEHGRVDVREILNTGLFSLEKAQQAPGWLRGLRGGSNSSMAPRVPETLEYGVSSFCYRRSRPFHPERLHSLIFGAEGCECSDGDKVSSEGCLISHVGRDISGDRKAEPWPLLQGTGVHQSSGSAQLHPLQSLVRVKGYLWLATQMQQMVFWSLAGAVHSFTSRDYDRWLCATDPVEWPETL-TLTQLQANWAPVWGDRRQEVVLIGVQMDQAAVEKALDACLLTDKELVRMPWEWAETFVDPF 891 RPD LPVT+LSGFLGAGKTTLL H+LNN++ RVAV+VNDM+++NIDA LV + + + +E++V M+NGCICCTLREDLL +I LA E FDYLLIES+GISEPL VAETFTF DE G SLS +ARLDT VTVVDA + R +++R+AA E ++GEED++T+ DL+ EQ+EF DV++LNK DL+ A L L A++ LNP A ++ E GRV + +L+TG F E+A QAPGWL+ LRG PET EYG+ SF +R RPFHP+RL D E WP +VR KGY WL T+ WS AG V + Y W A WPE + + ++ A+W P++GDR QE+VLIGV MDQAA+ L ACL+T +E+ R E A T DPF Sbjct: 21 RPDARLPVTVLSGFLGAGKTTLLNHVLNNREGRRVAVIVNDMSDVNIDARLVREGGAALS-----RADEKLVEMSNGCICCTLREDLLIEIRRLAAEGRFDYLLIESTGISEPLPVAETFTFRDEDGLSLSDVARLDTMVTVVDAFNFLRDYASQDRLAARGE------TLGEEDERTVVDLLIEQVEFCDVMVLNKTDLIAA---------------------DELERLEAILRQLNPRADIVHGEFGRVPLARVLDTGRFDFEEAAQAPGWLKVLRG-------EHTPETEEYGIGSFVFRARRPFHPQRL---------------------------------WDCFHEEWP--------------------GVVRSKGYFWLVTRPAFAASWSQAGPVTRHGAAGY--WWAALPRERWPEDVESRARIVADWDPIYGDRCQELVLIGVGMDQAALTARLQACLMTQEEMTRPAIELA-TIRDPF 413
BLAST of NO27G01540 vs. NCBI_GenBank
Match: WP_054486930.1 (GTP-binding protein [Achromobacter sp. 2789STDY5608621]) HSP 1 Score: 349.4 bits (895), Expect = 3.500e-92 Identity = 216/488 (44.26%), Postives = 276/488 (56.56%), Query Frame = 0 Query: 405 RPDI-LPVTLLSGFLGAGKTTLLKHILNNQQNWRVAVLVNDMNELNIDAALVSQDRQRVQVVGKVQEEERIVSMANGCICCTLREDLLAQIVDLAQEEEFDYLLIESSGISEPLAVAETFTFEDEHGRSLSSLARLDTTVTVVDAPDLHRHLRARERVAASKEREVCPISMGEEDDKTLADLMCEQIEFADVVILNKIDLLPAVGAVDSPVTVSSTGSFSKTPITSLSALRALIHTLNPGAKVLSAEHGRVDVREILNTGLFSLEKAQQAPGWLRGLRGGSNSSMAPRVPETLEYGVSSFCYRRSRPFHPERLHSLIFGAEGCECSDGDKVSSEGCLISHVGRDISGDRKAEPWPLLQGTGVHQSSGSAQLHPLQSLVRVKGYLWLATQMQQMVFWSLAGAVHSFTSRDYDRWLCATDPVEWPETL-TLTQLQANWAPVWGDRRQEVVLIGVQMDQAAVEKALDACLLTDKELVRMPWEWAETFVDPF 891 RPD LPVT+LSGFLGAGKTTLL H+LNN++ RVAV+VNDM+++NIDA LV + + + +E++V M+NGCICCTLREDLL +I LA E FDYLLIES+GISEPL VAETFTF DE G SLS +ARLDT VTVVDA + R +++R+AA E ++GEED++T+ DL+ EQ+EF DV++LNK DL+ A L L A++ LNP A ++ E GRV + +L+TG F E+A QAPGWL+ LRG PET EYG+ SF +R RPFHP+RL D E WP +VR KGY WL T+ WS AG V + Y W A WPE + + ++ A+W P++GDR QE+VLIGV MDQAA+ L ACL+T +E+ R E A T DPF Sbjct: 14 RPDARLPVTVLSGFLGAGKTTLLNHVLNNREGRRVAVIVNDMSDVNIDARLVREGGAALS-----RADEKLVEMSNGCICCTLREDLLIEIRRLAAEGRFDYLLIESTGISEPLPVAETFTFRDEDGLSLSDVARLDTMVTVVDAFNFLRDYASQDRLAARGE------TLGEEDERTVVDLLIEQVEFCDVMVLNKTDLIAA---------------------DELERLEAILRQLNPRADIVHGEFGRVPLARVLDTGRFDFEEAAQAPGWLKVLRG-------EHTPETEEYGIGSFVFRARRPFHPQRL---------------------------------WDCFHEEWP--------------------GVVRSKGYFWLVTRPAFAASWSQAGPVTRHGAAGY--WWAALPRERWPEDVESRARIVADWDPIYGDRCQELVLIGVGMDQAALTARLQACLMTQEEMTRPAIELA-TIRDPF 406
BLAST of NO27G01540 vs. NCBI_GenBank
Match: WP_076520823.1 (GTP-binding protein [Achromobacter sp. MFA1 R4] >SIT30782.1 GTPase, G3E family [Achromobacter sp. MFA1 R4]) HSP 1 Score: 349.4 bits (895), Expect = 3.500e-92 Identity = 212/483 (43.89%), Postives = 273/483 (56.52%), Query Frame = 0 Query: 409 LPVTLLSGFLGAGKTTLLKHILNNQQNWRVAVLVNDMNELNIDAALVSQDRQRVQVVGKVQEEERIVSMANGCICCTLREDLLAQIVDLAQEEEFDYLLIESSGISEPLAVAETFTFEDEHGRSLSSLARLDTTVTVVDAPDLHRHLRARERVAASKEREVCPISMGEEDDKTLADLMCEQIEFADVVILNKIDLLPAVGAVDSPVTVSSTGSFSKTPITSLSALRALIHTLNPGAKVLSAEHGRVDVREILNTGLFSLEKAQQAPGWLRGLRGGSNSSMAPRVPETLEYGVSSFCYRRSRPFHPERLHSLIFGAEGCECSDGDKVSSEGCLISHVGRDISGDRKAEPWPLLQGTGVHQSSGSAQLHPLQSLVRVKGYLWLATQMQQMVFWSLAGAVHSFTSRDYDRWLCATDPVEWPETLT-LTQLQANWAPVWGDRRQEVVLIGVQMDQAAVEKALDACLLTDKELVRMPWEWAETFVDPF 891 LPVT+LSGFLGAGKTTLL HILNN++ RVAV+VNDM+E+NIDAALV + + + +E++V M+NGCICCTLREDLL ++ LA E FD L+IES+GISEPL VAETFTFE E GR L LARLDT VTVVDA + R +RE + E S+GEED++T+ DL+ EQIEF DV++LNK+DL+ A L A++ LNP A++ +AE G+V + +LNTGLF ++A +APGWLR LRG PET EYG+ SF Y+ RPFHPER + V SE WP +VR KGY WLA+ + WS AGAV + Y W A P WPE + ++ NW GD RQE+V+IG+ MD+ A+ DACLLTD+E+ + P W +T+ +PF Sbjct: 13 LPVTVLSGFLGAGKTTLLNHILNNREGRRVAVIVNDMSEVNIDAALVREGGAELS-----RTDEKLVEMSNGCICCTLREDLLIEVERLANEGRFDQLVIESTGISEPLPVAETFTFEGEDGRCLGELARLDTMVTVVDAYNFLRDYSSRESLQERGE------SLGEEDERTVVDLLVEQIEFCDVIVLNKVDLIAA---------------------DERERLMAILRKLNPRARIETAEFGKVPLDRVLNTGLFDFDEASKAPGWLRELRG-------QHTPETEEYGIRSFVYQARRPFHPERFFAY--------------VESE-------------------WP--------------------GVVRSKGYFWLASHPEMAGSWSQAGAVARHGAAGY--WWAAMPPERWPEDPEYVAIIRKNWVDGVGDARQELVVIGMDMDEVALRARFDACLLTDQEMAQGPHVW-KTWKNPF 400
BLAST of NO27G01540 vs. NCBI_GenBank
Match: PJF48063.1 (hypothetical protein CUN48_05340 [Chloroflexi bacterium]) HSP 1 Score: 349.4 bits (895), Expect = 3.500e-92 Identity = 213/486 (43.83%), Postives = 277/486 (57.00%), Query Frame = 0 Query: 409 LPVTLLSGFLGAGKTTLLKHILNNQQNWRVAVLVNDMNELNIDAALVSQDRQRVQVVGKVQEEERIVSMANGCICCTLREDLLAQIVDLAQEEEFDYLLIESSGISEPLAVAETFTFE--DEHGR--SLSSLARLDTTVTVVDAPDLHRHLRARERVAASKEREVCPISMGEEDDKTLADLMCEQIEFADVVILNKIDLLPAVGAVDSPVTVSSTGSFSKTPITSLSALRALIHTLNPGAKVLSAEHGRVDVREILNTGLFSLEKAQQAPGWLRGLRGGSNSSMAPRVPETLEYGVSSFCYRRSRPFHPERLHSLIFGAEGCECSDGDKVSSEGCLISHVGRDISGDRKAEPWPLLQGTGVHQSSGSAQLHPLQSLVRVKGYLWLATQMQQMVFWSLAGAVHSFTSRDYDRWLCATDPVEWPETLTLTQLQANWAPVWGDRRQEVVLIGVQMDQAAVEKALDACLLTDKELVRMPWEWAETFVDPF 891 LPVT+LSGFLGAGKTTLL H+LNN++ RVAV+VNDM+E+NIDA LV Q +V EE++V M NGCICCTLREDLL ++ LA+E FDYLLIES+GISEPL VAETFTFE D+ GR SLS +ARLDT VTVVDA + R E + A ++ GEED++T+ DL+ EQ+EFA+V+++NK DL+ + L L ++ LNP A+++ A HGRV + +LNTGLFSLEKA QAPGWL+ LRG VPET YGVSS YR RPFHP+RL W V+ SA +++R KG+ WLA++M + WS AGA+ RW T +WP+ +++A+W +GDRRQE+V IG + + V+ +D+CLLTD+E+ R P W F DPF Sbjct: 8 LPVTVLSGFLGAGKTTLLNHVLNNREGRRVAVIVNDMSEVNIDAQLVRDGAQLSRV------EEKLVEMTNGCICCTLREDLLVEVARLAREGRFDYLLIESTGISEPLPVAETFTFELADDQGRSFSLSDVARLDTMVTVVDAYNFLRDFNEAEDLRAR------GLAAGEEDERTITDLLVEQVEFANVIVINKTDLVNE---------------------SELIRLEGILRRLNPDARIVRASHGRVPLDAVLNTGLFSLEKAAQAPGWLKELRG-------EHVPETEAYGVSSLVYRARRPFHPQRL----------------------------------------W-----EAVNADWSSA------NVLRSKGFFWLASRMDEAGLWSQAGALLRIAYA--GRWYAGTPREQWPD-YARAEVEAHWQEPFGDRRQEIVFIGADLKRDLVQAVMDSCLLTDEEMARGPQAW-RRFPDPF 398 The following BLAST results are available for this feature:
BLAST of NO27G01540 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO27G01540 ID=NO27G01540|Name=NO27G01540|organism=Nannochloropsis oceanica|type=gene|length=2913bpback to top protein sequence of NO27G01540.1 >NO27G01540.1-protein ID=NO27G01540.1-protein|Name=NO27G01540.1|organism=Nannochloropsis oceanica|type=polypeptide|length=920bpback to top Synonyms
Publications
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