NO27G01540, NO27G01540 (gene) Nannochloropsis oceanica

Overview
NameNO27G01540
Unique NameNO27G01540
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2913
Alignment locationchr27:509515..512427 +

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Properties
Property NameValue
DescriptionCobalamin synthesis protein p47k
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr27genomechr27:509515..512427 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR003495CobW/HypB/UreG_dom
IPR011629Cbl_biosynth_CobW-like_C
Homology
BLAST of NO27G01540 vs. NCBI_GenBank
Match: XP_005855792.1 (cobalamin synthesis protein p47k [Nannochloropsis gaditana CCMP526] >EKU20568.1 cobalamin synthesis protein p47k [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 747.7 bits (1929), Expect = 4.400e-212
Identity = 413/745 (55.44%), Postives = 508/745 (68.19%), Query Frame = 0
Query:  170 PPYVVEYGLQVHQGVWYVASTKPRSHESFLEAASRALEEAT-GEDGGKEEVDCGGEDDDTVCVARPSPQSFQLAAHLPRITELHRPAEAADGNTHAYHFFIATTEVGSCETEEDR----------DSKGDSGSSDNSSVFSNTTIALNATSTTAPSAGRAIVWKTREQVRACRSTKQGLHAFPLVDQTRNLLETALRTGGGVLSGPGWDELHEYL------TSDNHKGGHSHNHVQTNASVEALLHQASLIKRPDILPVTLLSGFLGAGKTTLLKHILNNQQNWRVAVLVNDMNELNIDAALVSQD-RQRVQVVGKVQEEERIVSMANGCICCTLREDLLAQIVDLAQEEEFDYLLIESSGISEPLAVAETFTFEDEHGRSLSSLARLDTTVTVVDAPDLHRHLRARERVAASKEREVCPISMGEEDDKTLADLMCEQIEFADVVILNKIDLLPAVGAVDSPVTVSSTGSFSKTPITSLSALRALIHTLNPGAKVLSAEHGRVDVREILNTGLFSLEKAQQAPGWLRGLRGGSNSSMAPRVPETLEYGVSSFCYRRSRPFHPERLHSLIFGAEGCECSDGDKVSSEGCLISHVGRDISGDRKAEPWPLLQGTGVHQSSGSAQLHPLQSLVRVKGYLWLATQMQQMVFWSLAGAVHSFTSRDYDRWLCATDPVEWPETLTLTQLQANWAPVWGDRRQEVVLIGVQMDQAAVEKALDACLLTDKELVRM-PWEWAETFVDPFFPSGT 896
            PPY VEYGL+ H GVWYVAST PRSHESFLE A+RALEEA  GE     EV+   +++DT+C   P  +SFQLA HLP ITELHRP E+ D  THAYHF+IA       E E  +           S G   SSD+ SV S  TI   A  TT  +   A++WK+R +V+ CR  +QG HAFPLVDQ RNLLET LRTGGG+L+GPGWD L E+         +        +  ++ A+V++LL + SL++RP++LPVTLLSGFLGAGKTTLL+H+L+ Q  W+VAVLVNDMNELNIDA L++QD R+RV+VVGK   EERIVS++NGCICCTLREDLLAQIVDLA    FDYL+IESSGISEP+AVAETFTFEDEHGRSLSSLARLDTTVTVVDA DL RHL+A E+ +  +  +      G  ++K+LA+LM EQIEFADV++LNK+DLL +  A+ S     +      + + SL  L + +  LNP AK++ AEHGRVD  ++L+T  FS+EKAQ APGWL+ LRG        ++PET E+GV+SFCYRR RPFHP RLH+L+FG              EG      G D+                              SL+RVKGYLWLAT MQ MVFWSLAG+VHSFT+ + ++WL A DPVEWPETLT  +L+A+W PVWGDRRQE+V IGV M+QA VE+ALDACLLT++E+ RM P +WAE FVDPF   GT
Sbjct:   19 PPYTVEYGLKSHCGVWYVASTSPRSHESFLETAARALEEAVEGEHAIGREVE--EDEEDTICEGYPCRRSFQLAVHLPCITELHRPKESGDEKTHAYHFYIALAPAQITEAEGQKTTCSLTQAASGSCGSGNSSDDGSVVSTPTIETTALETTHDAT--ALLWKSRREVKVCRHEEQGKHAFPLVDQARNLLETGLRTGGGILAGPGWDALREFFQEGATDRDEEIAQPAGVSDPRSIATVQSLLQKISLLERPEVLPVTLLSGFLGAGKTTLLRHVLSQQAGWKVAVLVNDMNELNIDATLITQDRRRRVEVVGKPLSEERIVSLSNGCICCTLREDLLAQIVDLALTTTFDYLMIESSGISEPMAVAETFTFEDEHGRSLSSLARLDTTVTVVDAADLPRHLQAWEKASTEEGGDQACALGGTGEEKSLAELMVEQIEFADVIVLNKVDLLASPAALASNGVGGNPSLPRGSFLWSLPVLISALQKLNPRAKIVVAEHGRVDPAQVLHTQAFSMEKAQAAPGWLQTLRG-------TKMPETDEFGVTSFCYRRRRPFHPARLHALLFG--------------EG------GEDVXXXXXXXXXXXXXXXXXXXXXXG-------SLIRVKGYLWLATHMQHMVFWSLAGSVHSFTANEEEKWLAAIDPVEWPETLTAAELRAHWEPVWGDRRQEIVFIGVHMEQAKVEEALDACLLTEEEMTRMTPGDWAEVFVDPFVREGT 725          
BLAST of NO27G01540 vs. NCBI_GenBank
Match: WP_015768670.1 (GTP-binding protein [Candidatus Accumulibacter phosphatis] >ACV37509.1 cobalamin synthesis protein P47K [Candidatus Accumulibacter phosphatis clade IIA str. UW-1])

HSP 1 Score: 353.6 bits (906), Expect = 1.800e-93
Identity = 212/488 (43.44%), Postives = 278/488 (56.97%), Query Frame = 0
Query:  405 RPDILPVTLLSGFLGAGKTTLLKHILNNQQNWRVAVLVNDMNELNIDAALVSQDRQRVQVVGKVQEEERIVSMANGCICCTLREDLLAQIVDLAQEEEFDYLLIESSGISEPLAVAETFTFEDEHGRSLSSLARLDTTVTVVDAPDLHRHLRARERVAASKEREVCPISMGEEDDKTLADLMCEQIEFADVVILNKIDLLPAVGAVDSPVTVSSTGSFSKTPITSLSALRALIHTLNPGAKVLSAEHGRVDVREILNTGLFSLEKAQQAPGWLRGLRGGSNSSMAPRVPETLEYGVSSFCYRRSRPFHPERLHSLIFGAEGCECSDGDKVSSEGCLISHVGRDISGDRKAEPWPLLQGTGVHQSSGSAQLHPLQSLVRVKGYLWLATQMQQMVFWSLAGAVHSFTSRDY-DRWLCATDPVEWPETLTLTQLQAN-WAPVWGDRRQEVVLIGVQMDQAAVEKALDACLLTDKELVRMPWEWAETFVDPF 891
            R   LPVT+LSGFLGAGKTTLL H+LNN+Q  RVAV+VNDM+E+NIDA LV++   R+      + EE++V M+NGCICCTLREDLL +I  LA+EE FDYLLIES+GISEPL VAETFTF DE G SLS ++RLDT VTVVD  +      +++ +A   E      S+GE D++T+ +L+ EQ+EF DV++LNKIDLLPA                       L+ L A++ TLNP A ++ A  G++ +  ILNTG F  E+A QAPGWL+ LRG         +PET EYG+SSF YR  RPFHP R H  I                                  + WP                     ++R KGY WLAT+   +  WS AG V   T  +    W  A    +WP+     ++  + W   +GD +QE+V+IG++MD++A+  A DACLL+D ELV  P  W   + DPF
Sbjct:    8 RDSRLPVTVLSGFLGAGKTTLLNHVLNNRQGQRVAVIVNDMSEVNIDARLVAEGGARLS-----RAEEKMVEMSNGCICCTLREDLLIEIARLAKEERFDYLLIESTGISEPLPVAETFTFRDEDGTSLSDISRLDTMVTVVDGFNFLNDYSSQDYIADRGE------SLGEGDERTVVNLLVEQVEFCDVIVLNKIDLLPA---------------------EDLARLEAILRTLNPRADIVQACFGQMPLERILNTGRFDFERAAQAPGWLQELRG-------EHIPETAEYGISSFVYRARRPFHPARFHEWI---------------------------------NQEWP--------------------GVIRSKGYFWLATRPGLVGSWSQAGPV---TRHEVGGLWWVAVPETDWPQDEEGRRIILDRWLEPYGDAQQELVMIGIEMDESALRHAFDACLLSDTELVAGPEAWVR-YEDPF 399          
BLAST of NO27G01540 vs. NCBI_GenBank
Match: WP_081760348.1 (MULTISPECIES: GTP-binding protein [Bordetella] >OZI80038.1 hypothetical protein CAL24_09050 [Bordetella genomosp. 2])

HSP 1 Score: 352.8 bits (904), Expect = 3.200e-93
Identity = 219/498 (43.98%), Postives = 284/498 (57.03%), Query Frame = 0
Query:  396 LLHQASLIKRPDILPVTLLSGFLGAGKTTLLKHILNNQQNWRVAVLVNDMNELNIDAALVSQDRQRVQVVGKVQEEERIVSMANGCICCTLREDLLAQIVDLAQEEEFDYLLIESSGISEPLAVAETFTFEDEHGRSLSSLARLDTTVTVVDAPDLHRHLRARERVAASKEREVCPISMGEEDDKTLADLMCEQIEFADVVILNKIDLLPAVGAVDSPVTVSSTGSFSKTPITSLSALRALIHTLNPGAKVLSAEHGRVDVREILNTGLFSLEKAQQAPGWLRGLRGGSNSSMAPRVPETLEYGVSSFCYRRSRPFHPERLHSLIFGAEGCECSDGDKVSSEGCLISHVGRDISGDRKAEPWPLLQGTGVHQSSGSAQLHPLQSLVRVKGYLWLATQMQQMVFWSLAGAV--HSFTSRDYDRWLCATDPVEWP-ETLTLTQLQANWAPVWGDRRQEVVLIGVQMDQAAVEKALDACLLTDKELVRMPWEWAETFVDPF 891
            LLH A+     D LPVT+LSGFLGAGKTTLL HILNN++  RVAV+VNDM+E+NIDA LV Q    +      + EE++V M+NGCICCTLREDLL ++  LA+E +FD L+IES+GISEPL VAETFTF DE GR LS +ARLDT VTVVDA +  R   + + + A  E      S+G  D++T+ DL+ EQ+EF DV++LNKIDL+ A GA +                     L A++  LNP A++++AE GRV + ++L+TGLF  E+A QAPGWL+ LRG         +PET EYG+ SF YR  RPFHP R H+LI                                    WP                     +VR KG+ WLA++      WS AG V  H        RW  A    +WP +  T+ +++A W    GD RQE+VLIG+ MDQAA+   LD CLL D E+ + P  W+ T+ DPF
Sbjct:   28 LLHSAA-SHTMDKLPVTVLSGFLGAGKTTLLNHILNNREGRRVAVIVNDMSEVNIDADLVRQGGAELS-----RTEEKLVEMSNGCICCTLREDLLLEVSRLAREGKFDQLVIESTGISEPLPVAETFTFADETGRGLSDVARLDTMVTVVDAYNFLRDYSSYDSLQARGE------SLGAADERTVVDLLVEQVEFCDVIVLNKIDLVEA-GARE--------------------RLAAMLGRLNPRARIVAAEFGRVPLDQLLDTGLFDFEQAAQAPGWLKELRG-------EHLPETQEYGIDSFVYRARRPFHPARFHALI---------------------------------ESDWP--------------------GVVRSKGFFWLASRPALAGSWSQAGGVCRHGLAG----RWWAAVPAEQWPRDAETVARIRAKWHEETGDARQELVLIGMGMDQAALRARLDRCLLDDAEMAQGPAAWS-TYPDPF 427          
BLAST of NO27G01540 vs. NCBI_GenBank
Match: WP_002617667.1 (GTP-binding protein [Stigmatella aurantiaca] >EAU63472.1 CobW [Stigmatella aurantiaca DW4/3-1] >ADO73818.1 Cobalamin (vitamin B12) biosynthesis CobW-like protein [Stigmatella aurantiaca DW4/3-1])

HSP 1 Score: 352.4 bits (903), Expect = 4.100e-93
Identity = 208/485 (42.89%), Postives = 281/485 (57.94%), Query Frame = 0
Query:  409 LPVTLLSGFLGAGKTTLLKHILNNQQNWRVAVLVNDMNELNIDAALVSQDRQRVQVVGKVQEEERIVSMANGCICCTLREDLLAQIVDLAQEEEFDYLLIESSGISEPLAVAETFTFEDEHGRSLSSLARLDTTVTVVDAPDLHRHLRARERVAASKEREVCPISMGEEDDKTLADLMCEQIEFADVVILNKIDLLPAVGAVDSPVTVSSTGSFSKTPITSLSALRALIHTLNPGAKVLSAEHGRVDVREILNTGLFSLEKAQQAPGWLRGLRGGSNSSMAPRVPETLEYGVSSFCYRRSRPFHPERLHSLIFGAEGCECSDGDKVSSEGCLISHVGRDISGDRKAEPWPLLQGTGVHQSSGSAQLHPLQSLVRVKGYLWLATQMQQMVFWSLAGAVHSFTSRDYDRWLCATDPVEWPETLTL-TQLQANWAPVWGDRRQEVVLIGVQMDQAAVEKALDACLLTDKELVRMPWEWAETFVDPFFP 893
            LPVT+LSGFLGAGKTTLL H+L N++  +VAV+VNDM+E+NIDA LV   R  +  V     +E++V M NGCICCTLREDLL ++  LA++  FDYLLIES+GISEPL VAETFTFE+E G+SLS +ARLDT VTVVDA    +   + + + + K      + +G+ED++T+ADL+ EQ+EFA+V++L+K+DL+ +  AV                      L A++  LNP A+++ AE G + +  IL+T LF +EKA  APGWL+ LRG         VPET EYG+SSF YR  RPFHP R  +L++G                               ++ W                    + ++R KG+ WLAT+M     WS AG+  S ++     W  A    EW E   L  Q++  W   WGDRRQE+V IG  +++ A+ + LDA LLTDKEL R P  W + F DPF P
Sbjct:   10 LPVTVLSGFLGAGKTTLLNHVLANREGRKVAVIVNDMSEVNIDARLVKGGRSALSRV-----DEKLVEMQNGCICCTLREDLLLEVARLARQNRFDYLLIESTGISEPLPVAETFTFEEEGGKSLSQVARLDTMVTVVDAKSFLQDWESEDDLRSRK------LGLGDEDERTVADLLVEQVEFANVLVLSKLDLISSEEAV---------------------RLEAMLRHLNPEARIVRAERGNLPLEAILDTRLFDMEKASLAPGWLKELRG-------EHVPETQEYGISSFVYRARRPFHPGRFWNLLYGG------------------------------SQVW--------------------KPVLRSKGFFWLATRMDDTGLWSHAGS--SASAGYAGTWFAALPQDEWAEDPELKAQVEKEWQEPWGDRRQEIVFIGAGLNEQALREKLDAALLTDKELARGPKAW-KRFRDPFAP 402          
BLAST of NO27G01540 vs. NCBI_GenBank
Match: WP_038684185.1 (GTP-binding protein [Rubrobacter radiotolerans] >AHY46423.1 Putative GTPases (G3E family) [Rubrobacter radiotolerans] >SMC04583.1 GTPase, G3E family [Rubrobacter radiotolerans DSM 5868])

HSP 1 Score: 352.1 bits (902), Expect = 5.400e-93
Identity = 212/483 (43.89%), Postives = 274/483 (56.73%), Query Frame = 0
Query:  409 LPVTLLSGFLGAGKTTLLKHILNNQQNWRVAVLVNDMNELNIDAALVSQDRQRVQVVGKVQEEERIVSMANGCICCTLREDLLAQIVDLAQEEEFDYLLIESSGISEPLAVAETFTFEDEHGRSLSSLARLDTTVTVVDAPDLHRHLRARERVAASKEREVCPISMGEEDDKTLADLMCEQIEFADVVILNKIDLLPAVGAVDSPVTVSSTGSFSKTPITSLSALRALIHTLNPGAKVLSAEHGRVDVREILNTGLFSLEKAQQAPGWLRGLRGGSNSSMAPRVPETLEYGVSSFCYRRSRPFHPERLHSLIFGAEGCECSDGDKVSSEGCLISHVGRDISGDRKAEPWPLLQGTGVHQSSGSAQLHPLQSLVRVKGYLWLATQMQQMVFWSLAGAVHSFTSRDYDRWLCATDPVEWP-ETLTLTQLQANWAPVWGDRRQEVVLIGVQMDQAAVEKALDACLLTDKELVRMPWEWAETFVDPF 891
            LPVT+LSGFLGAGKTTLL H+L N++  RVAV+VNDM+E+NIDA+LV+      +V      EER+V M NGCICCTLREDLL ++  LA++  FDYLL+ES+GISEPL VAETFTF DE GRSLS LARLDT VTVVD+P   +  +A + ++         +++ EEDD+T+ DL+ EQ+EFADV++LNK DL+                         +  L   I  LNPGA+VL  EHG V VRE+L TGLF  E+A ++PGWLR LRG S       VPET EYG+SSF +R  RPFHPERL                                        W L +                + ++R KG+ WLA++      WS AG V  F    +  W  A    EWP E  +L ++  +W  V+GDRRQE+V IG  +D+ A+ ++L+  LLTD+EL      W   F DPF
Sbjct:   13 LPVTVLSGFLGAGKTTLLNHVLANREGLRVAVIVNDMSEVNIDASLVASGASLNRV------EERLVEMTNGCICCTLREDLLVEVARLARDGRFDYLLVESTGISEPLPVAETFTFLDEEGRSLSDLARLDTLVTVVDSPQFLKEYQAADDLSGR------GLALSEEDDRTVTDLLVEQVEFADVILLNKCDLIEP---------------------EEVDVLEDAIRKLNPGARVLRTEHGVVPVREVLGTGLFDFERAAESPGWLRELRGES-------VPETEEYGISSFVFRARRPFHPERL----------------------------------------WDLAK-------------FQWKGVLRSKGFFWLASRRDVAFLWSQAGGVLRFEPSGF--WWAAAPREEWPSEQESLQEILESWDEVYGDRRQELVFIGQDLDREAMVRSLEDALLTDEELALGEAAW-PYFRDPF 399          
BLAST of NO27G01540 vs. NCBI_GenBank
Match: WP_054429443.1 (MULTISPECIES: GTP-binding protein [Achromobacter] >CUJ79954.1 Uncharacterized GTP-binding protein YjiA [Achromobacter sp. 2789STDY5608628] >CUI68227.1 Uncharacterized GTP-binding protein YjiA [Achromobacter sp. 2789STDY5608633])

HSP 1 Score: 350.1 bits (897), Expect = 2.000e-92
Identity = 216/490 (44.08%), Postives = 277/490 (56.53%), Query Frame = 0
Query:  403 IKRPDI-LPVTLLSGFLGAGKTTLLKHILNNQQNWRVAVLVNDMNELNIDAALVSQDRQRVQVVGKVQEEERIVSMANGCICCTLREDLLAQIVDLAQEEEFDYLLIESSGISEPLAVAETFTFEDEHGRSLSSLARLDTTVTVVDAPDLHRHLRARERVAASKEREVCPISMGEEDDKTLADLMCEQIEFADVVILNKIDLLPAVGAVDSPVTVSSTGSFSKTPITSLSALRALIHTLNPGAKVLSAEHGRVDVREILNTGLFSLEKAQQAPGWLRGLRGGSNSSMAPRVPETLEYGVSSFCYRRSRPFHPERLHSLIFGAEGCECSDGDKVSSEGCLISHVGRDISGDRKAEPWPLLQGTGVHQSSGSAQLHPLQSLVRVKGYLWLATQMQQMVFWSLAGAVHSFTSRDYDRWLCATDPVEWPETL-TLTQLQANWAPVWGDRRQEVVLIGVQMDQAAVEKALDACLLTDKELVRMPWEWAETFVDPF 891
            + RPD  LPVT+LSGFLGAGKTTLL H+LNN++  RVAV+VNDM+++NIDA LV +    +      + +E++V M+NGCICCTLREDLL +I  LA E  FDYLLIES+GISEPL VAETFTF DE G SLS +ARLDT VTVVDA +  R   +++R+AA  E      ++GEED++T+ DL+ EQ+EF DV++LNK DL+ A                       L  L A++  LNP A ++  E GRV +  +L+TG F  E+A QAPGWL+ LRG          PET EYG+ SF +R  RPFHP+RL                                  D   E WP                     +VR KGY WL T+      WS AG V    +  Y  W  A     WPE + +  ++ A+W P++GDR QE+VLIGV MDQAA+   L ACL+T +E+ R   E A T  DPF
Sbjct:   14 LARPDARLPVTVLSGFLGAGKTTLLNHVLNNREGRRVAVIVNDMSDVNIDARLVREGGAALS-----RADEKLVEMSNGCICCTLREDLLIEIRRLAAEGRFDYLLIESTGISEPLPVAETFTFRDEDGLSLSDVARLDTMVTVVDAFNFLRDYASQDRLAARGE------TLGEEDERTVVDLLIEQVEFCDVMVLNKTDLIAA---------------------DELERLEAILRQLNPRADIVHGEFGRVPLARVLDTGRFDFEEAAQAPGWLKVLRG-------EHTPETEEYGIGSFVFRARRPFHPQRL---------------------------------WDCFHEEWP--------------------GVVRSKGYFWLVTRPAFAASWSQAGPVTRHGAAGY--WWAALPRERWPEDVESRARIVADWDPIYGDRCQELVLIGVGMDQAALTARLQACLMTQEEMTRPAIELA-TIRDPF 408          
BLAST of NO27G01540 vs. NCBI_GenBank
Match: CUI49876.1 (Uncharacterized GTP-binding protein YjiA [Achromobacter sp. 2789STDY5608621])

HSP 1 Score: 349.4 bits (895), Expect = 3.500e-92
Identity = 216/488 (44.26%), Postives = 276/488 (56.56%), Query Frame = 0
Query:  405 RPDI-LPVTLLSGFLGAGKTTLLKHILNNQQNWRVAVLVNDMNELNIDAALVSQDRQRVQVVGKVQEEERIVSMANGCICCTLREDLLAQIVDLAQEEEFDYLLIESSGISEPLAVAETFTFEDEHGRSLSSLARLDTTVTVVDAPDLHRHLRARERVAASKEREVCPISMGEEDDKTLADLMCEQIEFADVVILNKIDLLPAVGAVDSPVTVSSTGSFSKTPITSLSALRALIHTLNPGAKVLSAEHGRVDVREILNTGLFSLEKAQQAPGWLRGLRGGSNSSMAPRVPETLEYGVSSFCYRRSRPFHPERLHSLIFGAEGCECSDGDKVSSEGCLISHVGRDISGDRKAEPWPLLQGTGVHQSSGSAQLHPLQSLVRVKGYLWLATQMQQMVFWSLAGAVHSFTSRDYDRWLCATDPVEWPETL-TLTQLQANWAPVWGDRRQEVVLIGVQMDQAAVEKALDACLLTDKELVRMPWEWAETFVDPF 891
            RPD  LPVT+LSGFLGAGKTTLL H+LNN++  RVAV+VNDM+++NIDA LV +    +      + +E++V M+NGCICCTLREDLL +I  LA E  FDYLLIES+GISEPL VAETFTF DE G SLS +ARLDT VTVVDA +  R   +++R+AA  E      ++GEED++T+ DL+ EQ+EF DV++LNK DL+ A                       L  L A++  LNP A ++  E GRV +  +L+TG F  E+A QAPGWL+ LRG          PET EYG+ SF +R  RPFHP+RL                                  D   E WP                     +VR KGY WL T+      WS AG V    +  Y  W  A     WPE + +  ++ A+W P++GDR QE+VLIGV MDQAA+   L ACL+T +E+ R   E A T  DPF
Sbjct:   21 RPDARLPVTVLSGFLGAGKTTLLNHVLNNREGRRVAVIVNDMSDVNIDARLVREGGAALS-----RADEKLVEMSNGCICCTLREDLLIEIRRLAAEGRFDYLLIESTGISEPLPVAETFTFRDEDGLSLSDVARLDTMVTVVDAFNFLRDYASQDRLAARGE------TLGEEDERTVVDLLIEQVEFCDVMVLNKTDLIAA---------------------DELERLEAILRQLNPRADIVHGEFGRVPLARVLDTGRFDFEEAAQAPGWLKVLRG-------EHTPETEEYGIGSFVFRARRPFHPQRL---------------------------------WDCFHEEWP--------------------GVVRSKGYFWLVTRPAFAASWSQAGPVTRHGAAGY--WWAALPRERWPEDVESRARIVADWDPIYGDRCQELVLIGVGMDQAALTARLQACLMTQEEMTRPAIELA-TIRDPF 413          
BLAST of NO27G01540 vs. NCBI_GenBank
Match: WP_054486930.1 (GTP-binding protein [Achromobacter sp. 2789STDY5608621])

HSP 1 Score: 349.4 bits (895), Expect = 3.500e-92
Identity = 216/488 (44.26%), Postives = 276/488 (56.56%), Query Frame = 0
Query:  405 RPDI-LPVTLLSGFLGAGKTTLLKHILNNQQNWRVAVLVNDMNELNIDAALVSQDRQRVQVVGKVQEEERIVSMANGCICCTLREDLLAQIVDLAQEEEFDYLLIESSGISEPLAVAETFTFEDEHGRSLSSLARLDTTVTVVDAPDLHRHLRARERVAASKEREVCPISMGEEDDKTLADLMCEQIEFADVVILNKIDLLPAVGAVDSPVTVSSTGSFSKTPITSLSALRALIHTLNPGAKVLSAEHGRVDVREILNTGLFSLEKAQQAPGWLRGLRGGSNSSMAPRVPETLEYGVSSFCYRRSRPFHPERLHSLIFGAEGCECSDGDKVSSEGCLISHVGRDISGDRKAEPWPLLQGTGVHQSSGSAQLHPLQSLVRVKGYLWLATQMQQMVFWSLAGAVHSFTSRDYDRWLCATDPVEWPETL-TLTQLQANWAPVWGDRRQEVVLIGVQMDQAAVEKALDACLLTDKELVRMPWEWAETFVDPF 891
            RPD  LPVT+LSGFLGAGKTTLL H+LNN++  RVAV+VNDM+++NIDA LV +    +      + +E++V M+NGCICCTLREDLL +I  LA E  FDYLLIES+GISEPL VAETFTF DE G SLS +ARLDT VTVVDA +  R   +++R+AA  E      ++GEED++T+ DL+ EQ+EF DV++LNK DL+ A                       L  L A++  LNP A ++  E GRV +  +L+TG F  E+A QAPGWL+ LRG          PET EYG+ SF +R  RPFHP+RL                                  D   E WP                     +VR KGY WL T+      WS AG V    +  Y  W  A     WPE + +  ++ A+W P++GDR QE+VLIGV MDQAA+   L ACL+T +E+ R   E A T  DPF
Sbjct:   14 RPDARLPVTVLSGFLGAGKTTLLNHVLNNREGRRVAVIVNDMSDVNIDARLVREGGAALS-----RADEKLVEMSNGCICCTLREDLLIEIRRLAAEGRFDYLLIESTGISEPLPVAETFTFRDEDGLSLSDVARLDTMVTVVDAFNFLRDYASQDRLAARGE------TLGEEDERTVVDLLIEQVEFCDVMVLNKTDLIAA---------------------DELERLEAILRQLNPRADIVHGEFGRVPLARVLDTGRFDFEEAAQAPGWLKVLRG-------EHTPETEEYGIGSFVFRARRPFHPQRL---------------------------------WDCFHEEWP--------------------GVVRSKGYFWLVTRPAFAASWSQAGPVTRHGAAGY--WWAALPRERWPEDVESRARIVADWDPIYGDRCQELVLIGVGMDQAALTARLQACLMTQEEMTRPAIELA-TIRDPF 406          
BLAST of NO27G01540 vs. NCBI_GenBank
Match: WP_076520823.1 (GTP-binding protein [Achromobacter sp. MFA1 R4] >SIT30782.1 GTPase, G3E family [Achromobacter sp. MFA1 R4])

HSP 1 Score: 349.4 bits (895), Expect = 3.500e-92
Identity = 212/483 (43.89%), Postives = 273/483 (56.52%), Query Frame = 0
Query:  409 LPVTLLSGFLGAGKTTLLKHILNNQQNWRVAVLVNDMNELNIDAALVSQDRQRVQVVGKVQEEERIVSMANGCICCTLREDLLAQIVDLAQEEEFDYLLIESSGISEPLAVAETFTFEDEHGRSLSSLARLDTTVTVVDAPDLHRHLRARERVAASKEREVCPISMGEEDDKTLADLMCEQIEFADVVILNKIDLLPAVGAVDSPVTVSSTGSFSKTPITSLSALRALIHTLNPGAKVLSAEHGRVDVREILNTGLFSLEKAQQAPGWLRGLRGGSNSSMAPRVPETLEYGVSSFCYRRSRPFHPERLHSLIFGAEGCECSDGDKVSSEGCLISHVGRDISGDRKAEPWPLLQGTGVHQSSGSAQLHPLQSLVRVKGYLWLATQMQQMVFWSLAGAVHSFTSRDYDRWLCATDPVEWPETLT-LTQLQANWAPVWGDRRQEVVLIGVQMDQAAVEKALDACLLTDKELVRMPWEWAETFVDPF 891
            LPVT+LSGFLGAGKTTLL HILNN++  RVAV+VNDM+E+NIDAALV +    +      + +E++V M+NGCICCTLREDLL ++  LA E  FD L+IES+GISEPL VAETFTFE E GR L  LARLDT VTVVDA +  R   +RE +    E      S+GEED++T+ DL+ EQIEF DV++LNK+DL+ A                          L A++  LNP A++ +AE G+V +  +LNTGLF  ++A +APGWLR LRG          PET EYG+ SF Y+  RPFHPER  +               V SE                   WP                     +VR KGY WLA+  +    WS AGAV    +  Y  W  A  P  WPE    +  ++ NW    GD RQE+V+IG+ MD+ A+    DACLLTD+E+ + P  W +T+ +PF
Sbjct:   13 LPVTVLSGFLGAGKTTLLNHILNNREGRRVAVIVNDMSEVNIDAALVREGGAELS-----RTDEKLVEMSNGCICCTLREDLLIEVERLANEGRFDQLVIESTGISEPLPVAETFTFEGEDGRCLGELARLDTMVTVVDAYNFLRDYSSRESLQERGE------SLGEEDERTVVDLLVEQIEFCDVIVLNKVDLIAA---------------------DERERLMAILRKLNPRARIETAEFGKVPLDRVLNTGLFDFDEASKAPGWLRELRG-------QHTPETEEYGIRSFVYQARRPFHPERFFAY--------------VESE-------------------WP--------------------GVVRSKGYFWLASHPEMAGSWSQAGAVARHGAAGY--WWAAMPPERWPEDPEYVAIIRKNWVDGVGDARQELVVIGMDMDEVALRARFDACLLTDQEMAQGPHVW-KTWKNPF 400          
BLAST of NO27G01540 vs. NCBI_GenBank
Match: PJF48063.1 (hypothetical protein CUN48_05340 [Chloroflexi bacterium])

HSP 1 Score: 349.4 bits (895), Expect = 3.500e-92
Identity = 213/486 (43.83%), Postives = 277/486 (57.00%), Query Frame = 0
Query:  409 LPVTLLSGFLGAGKTTLLKHILNNQQNWRVAVLVNDMNELNIDAALVSQDRQRVQVVGKVQEEERIVSMANGCICCTLREDLLAQIVDLAQEEEFDYLLIESSGISEPLAVAETFTFE--DEHGR--SLSSLARLDTTVTVVDAPDLHRHLRARERVAASKEREVCPISMGEEDDKTLADLMCEQIEFADVVILNKIDLLPAVGAVDSPVTVSSTGSFSKTPITSLSALRALIHTLNPGAKVLSAEHGRVDVREILNTGLFSLEKAQQAPGWLRGLRGGSNSSMAPRVPETLEYGVSSFCYRRSRPFHPERLHSLIFGAEGCECSDGDKVSSEGCLISHVGRDISGDRKAEPWPLLQGTGVHQSSGSAQLHPLQSLVRVKGYLWLATQMQQMVFWSLAGAVHSFTSRDYDRWLCATDPVEWPETLTLTQLQANWAPVWGDRRQEVVLIGVQMDQAAVEKALDACLLTDKELVRMPWEWAETFVDPF 891
            LPVT+LSGFLGAGKTTLL H+LNN++  RVAV+VNDM+E+NIDA LV    Q  +V      EE++V M NGCICCTLREDLL ++  LA+E  FDYLLIES+GISEPL VAETFTFE  D+ GR  SLS +ARLDT VTVVDA +  R     E + A        ++ GEED++T+ DL+ EQ+EFA+V+++NK DL+                       + L  L  ++  LNP A+++ A HGRV +  +LNTGLFSLEKA QAPGWL+ LRG         VPET  YGVSS  YR  RPFHP+RL                                        W       V+    SA      +++R KG+ WLA++M +   WS AGA+         RW   T   +WP+     +++A+W   +GDRRQE+V IG  + +  V+  +D+CLLTD+E+ R P  W   F DPF
Sbjct:    8 LPVTVLSGFLGAGKTTLLNHVLNNREGRRVAVIVNDMSEVNIDAQLVRDGAQLSRV------EEKLVEMTNGCICCTLREDLLVEVARLAREGRFDYLLIESTGISEPLPVAETFTFELADDQGRSFSLSDVARLDTMVTVVDAYNFLRDFNEAEDLRAR------GLAAGEEDERTITDLLVEQVEFANVIVINKTDLVNE---------------------SELIRLEGILRRLNPDARIVRASHGRVPLDAVLNTGLFSLEKAAQAPGWLKELRG-------EHVPETEAYGVSSLVYRARRPFHPQRL----------------------------------------W-----EAVNADWSSA------NVLRSKGFFWLASRMDEAGLWSQAGALLRIAYA--GRWYAGTPREQWPD-YARAEVEAHWQEPFGDRRQEIVFIGADLKRDLVQAVMDSCLLTDEEMARGPQAW-RRFPDPF 398          
The following BLAST results are available for this feature:
BLAST of NO27G01540 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_005855792.14.400e-21255.44cobalamin synthesis protein p47k [Nannochloropsis ... [more]
WP_015768670.11.800e-9343.44GTP-binding protein [Candidatus Accumulibacter pho... [more]
WP_081760348.13.200e-9343.98MULTISPECIES: GTP-binding protein [Bordetella] >OZ... [more]
WP_002617667.14.100e-9342.89GTP-binding protein [Stigmatella aurantiaca] >EAU6... [more]
WP_038684185.15.400e-9343.89GTP-binding protein [Rubrobacter radiotolerans] >A... [more]
WP_054429443.12.000e-9244.08MULTISPECIES: GTP-binding protein [Achromobacter] ... [more]
CUI49876.13.500e-9244.26Uncharacterized GTP-binding protein YjiA [Achromob... [more]
WP_054486930.13.500e-9244.26GTP-binding protein [Achromobacter sp. 2789STDY560... [more]
WP_076520823.13.500e-9243.89GTP-binding protein [Achromobacter sp. MFA1 R4] >S... [more]
PJF48063.13.500e-9243.83hypothetical protein CUN48_05340 [Chloroflexi bact... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR061ncniR061Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR103ngnoR103Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO27G01540.1NO27G01540.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|633717gene_9926Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100599g1gene9841Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO27G01540.1NO27G01540.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO27G01540 ID=NO27G01540|Name=NO27G01540|organism=Nannochloropsis oceanica|type=gene|length=2913bp
ATGCGTCCTCTTGCCTCGAGCTCCTTTTCGTCATACCGCCGCCTGCACAC
ACTCACAGTGCCGGGAATTCAATACCAGGATATTGTGGTAAAAGTTCTCG
AGACGCCCCAGCCCTCCTTTTCTTCTTCGTCGTCGTCGTCGTCATCCTCC
CTCTTCCTCCGCGTCCTTGTCGGgtaagtgcgtgggggaatgaaacggaa
attctacatgcagcaacacgtcctgtaccaagtaactctagtctttcatt
tgtgtctttactcccactcaagaaagcatgctcaattccctcgccctccc
tcaccgtaccgtactccccctcacagCGACGAGAGTGCTGTCGCCGAGCT
CGTCTACCGCTCCACCCGCAGCACCCACATCCGACGCGGTCGCTTCCTCC
TGCTTTCAGGTTTTGTCAATTGCTTCGATGGCATTATCCAACTGCATTGT
GGACCGCGGACCCAAGACCTCCAGCCACTGCACAAGCACGGGGGGGCCTC
TTTTATCGTGCCAGCCTCGGCCCGGGCCAATAACCTGTCGGCCATCGTGC
ATCATGTGGGAGCTATTCTCGTCCGCCCCGTCCCTGTCCAAAGGCCTTCC
AAGGGATTATTGAACATGAATAAAGTATGCCAGAATGCTGAGCATAACTA
TTTGGACTGTCCTCCCTATGTTGTGGAGTACGGTCTTCAAGTCCACCAGG
GCGTCTGGTACGTCGCTAGCACCAAACCCCGATCACACGAATCTTTTCTT
GAGGCAGCCTCCCGAGCGCTAGAGGAAGCGACTGGAGAAGATGGGGGTAA
GGAAGAGGTGGACTGCGGGGGCGAGGACGACGACACGGTCTGCGTGGCCC
GTCCTTCTCCTCAATCTTTCCAACTGGCTGCGCATCTGCCCCGAATCACA
GAGCTTCACCGTCCAGCAGAAGCAGCCGACGGCAATACACATGCGTACCA
TTTTTTTATCGCCACGACGGAGGTCGGCAGTTGTGAGACTGAGGAGGATC
GTGACAGCAAGGGCGACAGTGGCAGCAGCGACAACAGCAGCGTGTTCTCC
AACACTACAATTGCGCTCAATGCCACCTCCACCACTGCCCCCAGCGCTGG
CCGCGCTATCGTCTGGAAAACACGGGAGCAAGTACGGGCCTGCCGTTCGA
CGAAACAAGGCCTCCATGCCTTTCCCCTTGTCGACCAGACACGCAACCTC
CTCGAAACGGCCTTGCGTACGGGTGGTGGCGTGCTAAGTGGACCGGGGTG
GGACGAGTTGCATGAGTACCTGACGAGCGACAATCATAAAGGTGGCCACT
CCCACAACCATGTTCAGACCAACGCATCGGTTGAAGCTCTCTTACATCAA
GCTTCTTTGATCAAGCGCCCGGACATCTTGCCCGTGACTTTGTTGAGTGG
ATTCTTGGGTGCCGGAAAAACGACTCTTCTGAAGCATATCCTAAACAATC
AGCAGAATTGGCGAGTGGCGGTGCTGGTCAATGACATGAATGAGCTCAAT
ATTGATGCCGCACTTGTGTCGCAAGACCGACAGCGTGTACAGGTGGTAGG
CAAAGTCCAAGAGGAGGAACGTATCGTGTCCATGGCGAACGGCTGCATTT
GTTGCACGCTACGGGAGGATCTGCTCGCTCAAATTGTGGATTTGGCGCAG
GAGGAGGAATTCGACTATTTGTTGATTGAGAGTAGTGGAATTTCGGAGCC
TCTGGCTGTGGCTGAAACTTTCACCTTTGAGGATGAGCACGGCCGGTCCT
TGTCGTCGCTGGCGCGTTTGGACACGACTGTGACTGTGGTGGATGCGCCA
GACCTTCACCGACACTTGAGAGCGCGGGAGCGGGTAGCGGCGAGCAAAGA
ACGCGAGGTGTGTCCTATTTCAATGGGTGAAGAGGACGACAAGACGCTTG
CTGACTTAATGTGTGAGCAGATCGAATTTGCGGATGTGGTGATCCTGAAC
AAGATCGATCTGTTGCCTGCTGTCGGTGCCGTTGATAGCCCCGTGACTGT
CTCGTCGACTGGATCATTCTCTAAGACCCCTATTACGTCCCTTTCTGCCC
TTCGAGCTCTCATTCACACGCTCAACCCGGGGGCCAAGGTATTGTCAGCT
GAACACGGACGCGTGGACGTTCGTGAGATCCTCAATACAGGGCTCTTCTC
GCTCGAGAAGGCGCAGCAAGCTCCGGGTTGGTTGCGAGGATTGCGCGGTG
GCAGCAACAGTTCCATGGCTCCCCGTGTGCCTGAGACATTGGAGTACGGT
GTCTCGAGCTTTTGCTACCGCCGGAGCCGCCCTTTCCACCCTGAACGGCT
GCATTCCTTGATTTTTGGGGCCGAAGGGTGTGAATGCAGCGATGGTGATA
AGGTTTCGAGTGAGGGTTGTCTGATATCCCATGTCGGTCGCGATATCTCA
GGGGATCGTAAGGCTGAGCCGTGGCCCCTGCTGCAAGGGACTGGCGTCCA
CCAGTCAAGCGGCTCTGCACAGCTCCACCCCCTCCAATCCCTTGTGCGCG
TCAAGGGCTACCTGTGGCTAGCAACACAGATGCAGCAAATGGTCTTCTGG
TCCCTGGCAGGGGCTGTGCACAGTTTCACCTCGCGAGATTATGACCGCTG
GCTGTGTGCCACGGACCCAGTGGAGTGGCCCGAGACTTTGACGTTGACGC
AGTTGCAGGCCAACTGGGCACCTGTGTGGGGGGACCGACGCCAAGAAGTG
GTGCTTATTGGCGTGCAAATGGACCAGGCGGCAGTAGAAAAGGCTTTGGA
CGCATGTCTACTGACGGACAAGGAACTAGTGAGAATGCCTTGGGAGTGGG
CCGAGACCTTTGTCGATCCTTTTTTCCCAAGTGGAACGGGGGAAGAAAGC
GGACATGAGGACGATGAGAGCAGCAGCGAGTATGAAAGTGATGAGGAAGA
GGAGAACAATTAA
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protein sequence of NO27G01540.1

>NO27G01540.1-protein ID=NO27G01540.1-protein|Name=NO27G01540.1|organism=Nannochloropsis oceanica|type=polypeptide|length=920bp
MRPLASSSFSSYRRLHTLTVPGIQYQDIVVKVLETPQPSFSSSSSSSSSS
LFLRVLVGDESAVAELVYRSTRSTHIRRGRFLLLSGFVNCFDGIIQLHCG
PRTQDLQPLHKHGGASFIVPASARANNLSAIVHHVGAILVRPVPVQRPSK
GLLNMNKVCQNAEHNYLDCPPYVVEYGLQVHQGVWYVASTKPRSHESFLE
AASRALEEATGEDGGKEEVDCGGEDDDTVCVARPSPQSFQLAAHLPRITE
LHRPAEAADGNTHAYHFFIATTEVGSCETEEDRDSKGDSGSSDNSSVFSN
TTIALNATSTTAPSAGRAIVWKTREQVRACRSTKQGLHAFPLVDQTRNLL
ETALRTGGGVLSGPGWDELHEYLTSDNHKGGHSHNHVQTNASVEALLHQA
SLIKRPDILPVTLLSGFLGAGKTTLLKHILNNQQNWRVAVLVNDMNELNI
DAALVSQDRQRVQVVGKVQEEERIVSMANGCICCTLREDLLAQIVDLAQE
EEFDYLLIESSGISEPLAVAETFTFEDEHGRSLSSLARLDTTVTVVDAPD
LHRHLRARERVAASKEREVCPISMGEEDDKTLADLMCEQIEFADVVILNK
IDLLPAVGAVDSPVTVSSTGSFSKTPITSLSALRALIHTLNPGAKVLSAE
HGRVDVREILNTGLFSLEKAQQAPGWLRGLRGGSNSSMAPRVPETLEYGV
SSFCYRRSRPFHPERLHSLIFGAEGCECSDGDKVSSEGCLISHVGRDISG
DRKAEPWPLLQGTGVHQSSGSAQLHPLQSLVRVKGYLWLATQMQQMVFWS
LAGAVHSFTSRDYDRWLCATDPVEWPETLTLTQLQANWAPVWGDRRQEVV
LIGVQMDQAAVEKALDACLLTDKELVRMPWEWAETFVDPFFPSGTGEESG
HEDDESSSEYESDEEEENN*
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Synonyms
Publications