NO27G01440, NO27G01440 (gene) Nannochloropsis oceanica

Overview
NameNO27G01440
Unique NameNO27G01440
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length4686
Alignment locationchr27:470431..475116 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr27genomechr27:470431..475116 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0031204posttranslational protein targeting to membrane, translocation
Vocabulary: Cellular Component
TermDefinition
GO:0031207Sec62/Sec63 complex
Vocabulary: INTERPRO
TermDefinition
IPR018624Sec66
Homology
The following BLAST results are available for this feature:
BLAST of NO27G01440 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR061ncniR061Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR044ncniR044Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO27G01440.1NO27G01440.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|674354gene_9934Nannochloropsis oceanica (N. oceanica CCMP1779)gene
jgi.p|Nanoce1779_2|217030gene_8737Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO27G01440.1NO27G01440.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO27G01440 ID=NO27G01440|Name=NO27G01440|organism=Nannochloropsis oceanica|type=gene|length=4686bp
ATGACCCCGGAGGAAGCAGCAGCGGCGGCTGCTGCGGCAGCGGCAGAAGA
GGCTGCCAAGGCGGCGGGAGCGGGCAGTGGGGCCCCTCCAGGGATGGAGG
AGGCGGCCGAGGCGGTGGTGAAGAGCTCCTTGTCCTTTGCCGTGGTGATT
ATCATCCTACTGGTCTGTGCGGGCCTAGCTGCGGCCTTGGTATACTTGCA
GCGGAAGCgtgagtggcaccagggagggcgggagggagggaaggagaggc
ggcctacttccgctgtcttgcgcgcgacccatctggttgcctccttgttc
caattcaaggacactcacctgctcctccctccctccttccctccttttct
ccctcccttatcaacagGACACGAGACCTCTTCCCTCCTCTCGGGCCTCG
ATAATCGCTACGACGACATCCTGGACCGTCTGCAGgtatgccctccctcc
ctccctccctccctccctccctcacgcttactcgccttcccttcccatcg
ctctttctaaatagGAAATTGGGGATCAATTTGATGACACCATGGAAAAA
GCCGAGGAAGAGCCGTCTACACTCGAGAAgtagggatggagggacggagg
ggggaatctaggtttatgatcagattattagtgttgtcttcaaatgtcaa
catgtccatatgacatgctgcttatcccctccctccctgcctccctagAC
GCAATGCCCTGATCAAACGAGCCGCAGCCGTCATTCCCATCGTGAGGGTT
GTGCAGCAGGAGATGCAGCAGAAGCAGgtagggagtgggagggagggagg
aaggaagggagggaggggggagggaggggggaagggagggaggagaggcc
agtcggtagagagggcgttgcctcatgccctccctccctcccttccttcc
tagGTGCTTTACCGGGAAGGCAAGATGCGCGCGGAAGATTTTGAAAGCTT
GCACCGgtgagatagggagggagggagggagggagggagggagggaggga
gggagggaaggagggagagctacgagtaaagagcacgacacggggtcgga
gatggccggcccgcgcacccatccatccctccctccctccctccctctca
tccagGCTGAAGGGCGCCATTGACGAGGAGACGGAGGTGATCCGTCAGAT
TGCCGAGGAGATTAATCCCGGCTTTGGCCAACGGATCTTCTCCATGGTAG
CTTCCTCGCAACACTgtgcgtcccgccttccctccctccctccctccctc
tctccctccctcccttccttcctcttatgcccgtcgtatcgagcccgtcg
aaatgatacctgtatttctcccttcaaacaaacctccctccctccctccc
tccctccctccagTCCAGCTGCTCTTCATGATGGACAGCAACAGCAAGGC
CTACGAGACGGCGCTAGCCGAAAACCCCGATAAGGCCGAACAGAAGCTCC
TCCTCATCATCCACCGAGCCATGCCCTGCTTCGACTTTTTGAAGgtgagg
gaggagggagggagggagggagggaggaggagggagagcagcaaacccct
cgaagaatgctttaacggaagaccctgactagatggcgtgaaagcctctc
ctcgtcagttatcctgcctccttccccctgctgtgcaggtcccaccctcc
ctcccatttctccttcccaccctcccagcgcctggagcccgtcccgacga
agacacccacaccgtctctcccgtctgctctatcaatcttgttctcaccc
ctcccttcctcccttcctcccttcctccctccctccctgcttggcagCAA
ATGAAGGGCATCCCCATCGAGGCTCTGCACAAGGACGGCAAGATTTCCCT
CGACGAATACGAGTGTTTCATGGGgtgaggcggagggagggagggaggga
gggagggagggagggaggatgtgataaattaggttgagagtcctacccct
ccctccctctctccctctccctcctttccacagCGTGAAGCATAGGCTGG
AGGAGGAGAAAAAGGCGGTGGAGACAGAGGCGGTGCGCATTGACCCGGAC
TTTAAGGTCTTTCATATGGTCATGGGCCCCCAGCAACAGCTATgtacgtc
cctccctccctccctccctccctccctcccctccccgtcttgattccctt
cttgtctgcattcgctgctgctgctccacctccccatccatcgcccttcc
tccctccctccctccaccgaccggattccaacttatttcttctccctccc
tccctccctcagTCAAGATGTGCATGGAGGCCGATCGCATCGTCCGGAGC
TACGACGCCTTCATCGAGAAGACAGAGGATGAGCTCACCCCTCGTCAACG
gtacgctcctcctccctccctccctccctccctccctccctccctccctc
ccttttgtcctcctttttctctcctgctatagccgtgctgttgccctgat
ctgattccccccctccctccctccctccctccctccctccctccctccct
ccctccctccctccctccccagCTTCCTCTCCCTCATCCTCCGCAAGGGT
GTCCCTATGATGAGCTTCGACAAGgtgcgccgcccctccctccctccctc
cctccctccctccctccctcgccatatctaccggctcctcaagcccatca
ttcaaacacccacatctctcacaaactttacttcccgccacctcccctcc
tcaccctccctccctccctccctttctagAACCTGGCCGGCAACGCCCTG
GAGGCTCAGAAGGTCTACGAGGAGGGCAAGCTGCCCCTGGAGGTGTATGA
GGCGCTCTTGACgtacggcaggagggagggagggagggagggagggaggg
agggagggaggagggcgatacctgagggcaagctcacaaaccctcctttc
ccccctccctccctccccctcagCGTGAAGAAGCGGATCGAAAAGCGCTT
GGCGAGCATTAAGGAGGAGGCGAACGTCCTCCTCCCCTCCCTCGGGGACA
AGCTCGAGCGAGTTTGGGAAAAGCTCCAGCCGCACTgtacgtcttccctc
cctccctccctccctccctccccaactgatttctaagtggccgtccctcc
tcctcgaacgaatgatgctttggacctcactcccccttcctccctccctc
agTCCGGCCCGTGCTGGTGATGGAGGCCACGATCGACAAGTACGACGAGA
CGATCAAGAAGGACGACAACATGCCGCAGACCACCAAgtagggagggagg
gagggagggagggagggagggagggagggatgtcatgggctggaagaagg
acaaggaaagattgaaagacttccacaacccctctcgttccctccctccc
tccctccctccctccctccctccagACTAACCACCTTATTGGAAAAGCGC
GTGCTGCCGGCGCGGGAGCTGTCGGGGAAGGTGACGGCGGCCATCGAGGA
GATGGAGACGTTGTATCAGGAGGGGAAGTGCGATGAGGTCGAGCTCGAGA
TCATGATGGCgtgagtattgcccctccctccctccctccctcacgtgtgg
tggcttgggcttgcttttccttcccccaaaaaatgtgttgaatcttcctt
tctccttccttcttatcctctctccctcccttcagTATCAAGGAGCGGGT
GGAGGAGGAGCTGCAGGCAGTGAGGGAGGAAGGCTTTGAGCTCATGGGGT
CAGATTATGACGTTCTCGAGAAGGAGGACGAAAAGGAGGAGAAGCGCCTG
CGAGCGgtgaggaatgagggaagggaggagggagggagggagggagggag
ggagggagggagggagggagggagggagggagggagggagggagggaggg
agggagggagggagggagggagggagggagggagggagggagggagggag
ggagggagggagggaagacgacccagcaaagatcgctcttttccccgtcg
acaactcatctttcctccctccctccctccctcccttccgcccttccttc
ttccctccttccctcgactcagCGAAAACCTTCCGCTGAgtcgacaaagg
agaggctgaagcagaaagtggaagagaagaagcagcagcagcagcagcaa
caccagcctacccctccctccttcccctcctcctcctcctcttcttcttc
ttcttcctcctcctccgcttcagCGAAAAGCGAGAAGAAGGAGGAGGCCA
CACCACCCGCAGCACCAGCAGCAGCAGGAGCACCCGCAGTGGTAGCAGCA
GGGGGGGAGGGAAAGAGGGCGGGAAGGCGGTGAAAGACGACCTCGCAGCT
AAGgtggggagggacggaggcagggagggagaaggtgggcggaaagagta
agggaggcgtgctatgtctcattgtcactcctcacctatcttcctatttt
tccccctctcagaggcaatagcagctacagcagtcaccgcaccagcagta
gcaaactactcaccccatccctccctcggtccctccctcggtccctccct
cggtccctccctctctagGTTGCAGAGGCCGAGCGCATCGCCGCTGAGCT
CATGGCTGAAGAGAGCAGCAGCCACAACAAGAAGGGCAGCACTGGTGGTG
GAGGGGGGGGAGGGAAGGAGGGCGGAAAGGAGGGCGGGCCTGGTGGCAGT
GGAAGTGGAAAGAAAAAGAAGACGCCCAAGGCGTAG
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protein sequence of NO27G01440.1

>NO27G01440.1-protein ID=NO27G01440.1-protein|Name=NO27G01440.1|organism=Nannochloropsis oceanica|type=polypeptide|length=631bp
MTPEEAAAAAAAAAAEEAAKAAGAGSGAPPGMEEAAEAVVKSSLSFAVVI
IILLVCAGLAAALVYLQRKRHETSSLLSGLDNRYDDILDRLQEIGDQFDD
TMEKAEEEPSTLEKRNALIKRAAAVIPIVRVVQQEMQQKQVLYREGKMRA
EDFESLHRLKGAIDEETEVIRQIAEEINPGFGQRIFSMVASSQHFQLLFM
MDSNSKAYETALAENPDKAEQKLLLIIHRAMPCFDFLKQMKGIPIEALHK
DGKISLDEYECFMGVKHRLEEEKKAVETEAVRIDPDFKVFHMVMGPQQQL
FKMCMEADRIVRSYDAFIEKTEDELTPRQRFLSLILRKGVPMMSFDKNLA
GNALEAQKVYEEGKLPLEVYEALLTVKKRIEKRLASIKEEANVLLPSLGD
KLERVWEKLQPHFRPVLVMEATIDKYDETIKKDDNMPQTTKLTTLLEKRV
LPARELSGKVTAAIEEMETLYQEGKCDEVELEIMMAIKERVEEELQAVRE
EGFELMGSDYDVLEKEDEKEEKRLRARKPSADEKREEGGGHTTRSTSSSR
STRSGSSRGGGKEGGKAVKDDLAAKVAEAERIAAELMAEESSSHNKKGST
GGGGGGGKEGGKEGGPGGSGSGKKKKTPKA*
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Synonyms
Publications