NO27G01230, NO27G01230 (gene) Nannochloropsis oceanica

Overview
NameNO27G01230
Unique NameNO27G01230
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length6807
Alignment locationchr27:401082..407888 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr27genomechr27:401082..407888 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO27G01230 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR044ncniR044Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR093ngnoR093Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO27G01230.1NO27G01230.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|216128gene_8716Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO27G01230.1NO27G01230.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO27G01230 ID=NO27G01230|Name=NO27G01230|organism=Nannochloropsis oceanica|type=gene|length=6807bp
ATGGCGATTGCTCTCCGAGCCGTCGTGGGCGCGATGGTGCTCCAATATTA
CCTGTGCGTCTTCACTCTCGCTCGTGTATGTCTCTATGCCAGTgtaagta
aaggagggcggaagggagggagggggattagaaagacagcgtgtagcaga
ataaaggacgcagacatcatgcatgctaaagtggctagaaattaatttgt
gcctgtgtgtgagagagagaaagtgagtgagtgagtgtgagagagagaga
gagagagagagagagagagagggagacgaagagggagagggagaaagaga
gggagaaaaagagagagtgtgtatgtcttctcctctttttccagaacgga
tgttcatgggagatgaccgaggatctgatcaaaaggattctcgaggcaga
gggcccgacctggcgcgcgaagtatgcgtggcgcttcgtgtggttgatgg
aggaggtttgggctgtactgtgggctagcctcaaagccctgcaagtcacg
ggtagtgccttgtgggctatgatcggagtactgttgtgtgctcttaccgg
taccaatgcaaattggtactcatcgagttggaggaggcgaggagagagag
gaagaacctctccgagcacatgatccggtggcttgatgaggctgatgagt
ggaggaggagaatggaggacaccaggggaggagagcgggaggaatccctt
gagtcccttgagtcctcccgctctcctcccctggtgtcctccattctcct
cctccactcatcagcctcatcaagccaccggatcatgtgctcggagaggt
tcttcctctctctcctcgcctcctccaactcgatgagtaccaatttgcat
tggtaccggtaagagcacacaatcagtaccccgatcatagcccataaggc
actacccgtgacttgcagggctttgaggctagcccacagtacagcccaaa
cctcctccatcaaccacacgaagcgccacgcatacttcgcgcgccaggtc
gggccctctgcctcgagaatccttttgatcagatcctcggtcatctccca
tgaacctccgttctagatatctcataccatctccttggacactcgcggct
ccctttgacggtagagaggggtatgagaggggaggggggagcaagggacg
gacgcaggctgaatgaagggcgaggtgtcaacccaattggtgcttctgag
cctgaatatttggactgagcatgcattttgtgtctttagttggtttgcga
ataatggagtgcttcctatgttcttttgtttaaatcatacactcctccct
tcctctacttccctcctctctccacgagacagctcgaagggatccatgtg
ccccgggcccaaagtagtggttaaaagaatgaaaaatcatcatccaaccc
tctgattccgtctctctcgtccctctccttccctccctcccttcaagGCT
GATGTGGCCCCCAACGCGGGACCCTCTATCATCATCAGGCCGGAGTCTGA
GCGTGTGCAGCCTCAGCAGTGGTGGCAGCAGGAGCCACCTCAGGAGCAGC
AGCAGCAGAAGGGGAAGAAGGGGAAAAAGCCGCCTCCGAAATTCAATCAC
TGGATATATAATGTGGTGCCCCCGATACGCTCGTACCAGAACGGAGGTTC
ATGGGAGATGACCGAGGATCTGATCAAAAGGATTCTCGAGGCAGAGGGCC
CGACCTGGCGCGCGAAGTATGCGTGGCGCTTCGTGTGGTTGTTGGAGGAG
GTTTGGGCTGTACTGTGGGCTAGCCTCAAAGCCCTGCAAGTCACGGGTAG
TGCCTTGTGGGCTATGATCGGGGTACTGATTGTGTGCTCCACCTGGTACC
AATGCAAATTGGTACTCATCGAGTTGAAGGAGGCGAGGAGAGAGAGGAAG
AACCTCTCCGAGCACATGATCCGGTGGCTTGATGAGGCTGATGAGTGGAG
AAGAAGAATGGAGGACACCAGGGGAGGAGAGCGGGAGGACTCAAAGGACT
GTGAATGCTGCTTTTGTGATGCTCTGGAGCCGTCGGGGGACATGGGGGAG
AAAGAGGGCACGGGGGACGCTGTAGCGGGTAACCTGCAGCAGCAGCAGCA
GCAGCAGCAGCTTTTGGGGATTGCCACTAATgtaaggagaagagaatcgc
acttattatccttttctcagtctttccctctccttaactttaagcccttt
taatcaccttcctccccctctttgctttctcctctcagGTCCCCCTGGAG
GGTAGTACCAGTTGTGCCCAAGAAGCTACGCAGCGACTGCAGCGTCATCA
CAACCATTACCACCACAGCCACAGCCACCACCACCACTACCACCACCACT
ATCACTACCACTTCCACCACTACTACCGTTATAACCACCATCAGCACCAT
TACCACCATCACCAGCAGCAGCAGCAGCAGCAACAGCACGAGCAACAGCA
CCAGCAACAGCACCAGCAACAGAACCATTACCCCTATCAGCAGCAGCAGC
AGCAGCAGCAGCAGCAGCGGCGGCGGCGTCGGCAGCGGCGATTGCTGAAC
GGCCCCCTTTCTCAATCCGAGCCGTCCATGCTGACCGCAGCCGTCTCCTC
TACACCGAGTCCATGGTCGACTGGCCCATCGGTGGGCTCACGCCAGCGGC
CGGAGCAGCAGCAGCAGGGGCAAGTTTCACATCCGCAGGTAGCCTCTTCG
CGTGAGGTGGTGTCACTTCCCTCTCTTCTCTCGTCTTTGCGAGCACAGCT
CATATGGCATGGATTCTCTCCCTCAATGCCTTTGTCGTCGTCCTTCTCCA
TGTTGGCGGCCTTGTCTGAAAAGGAGAGGAGAGAGAAAATAGAAGGAGAG
GGGGAGGAAGAAACGAAAGGGAATGCGAACGAGCCTTTGACGCTCATCTG
TTCCTCTTTTTTACCGCCCATTTTCTCGTCGTTTTTCATCGACGTGGAAC
AGCACCGGCAGCTAGTTGCTGTCAAAGTATCGGGGCCCATCCCAGCAGCA
TTACCGGTCGCAGCAGCAGCTTCAGCTTCTTTTACTGGTGTTCTCGCTTC
GTCAGTCCCTCCTTTTCTGCCTCCTTCCCTCCAACAGGATGCAGAGGTCA
CCTTTACGCCGTCTTCCCCTTTCTCCCTGTCTCAAGAAGCGTCATCAGTG
CTAGACGCGTCCTCGACGCTGACGACGACCGTGGTGGCCCCGGCGGTGGC
GGCAACGGCTGTGGCGGAGACTGAGGACGAGTTCGGGTTTGGGGCAGAGG
ATGGTGACTTGCAGGAATTGCAAGCCTCTTTTGCTCGTGAGGCGGCTATA
TGCCCATTCTCTACGGTCGGGTCAGAGATTTGGAGCAAGCAGGCAGAGAA
GGAGCAACGGGAGGAAGGGGAGCAGGAAGAGAAAGATGGCACGGGGGAGG
GGCGTAGATGCGTGTATGTTGCCGTTGACATTGACGCGCCTCTAGTTGAC
ATGCCTGGGGGTGAGAGTGAGGAAAATGCAGATGATAAAGAGCCAGAAGA
GAGTGCTGAGACTAAGGCCATCTTCTCCTTCGGGCTTAGTTCCTCCTCTT
CTTCCCGCTATTCCTACTCCGATGTCTCTTGGTCCTATTTTATCATCTCG
CGGACGGCTAATGATCACTCCGCTTCCACGTCTTCAGCCGCCTACCCACC
CTCCTTTCCCTCCCCTCCTACTCCCCTGGACCTGATTGAAGCTCTTCCCG
CCGTCTCGAACTCGCCTCTTCCAACGCCTATTGCTGTTGAGGAAGACGAC
AGCTTGGTTTACTCCTTCTCCTCCTCCTCCCCCTCGTCCACTTCCTCGTC
CGATGCTTTGGGACGGCAAGATATTGATGAGATGGAAGAGTGGGAATCAT
CACAATTTCAGCAAGAGCAGCAGCTACAAGGGCATCAAGATCAGCAGCTG
CTCGATGAGGTGGAAGACTGGGAGTTGGAATGTAGGCACCGTGAATTCGG
CAGTCGTATGCCTGACAGCATTTCCCCTCTCGCATACCTTCCGCACCCCC
TCTCTGATGGCTCCCTGGCTTTACGTCTGGGAGGGGGAAATTTGTTTAAT
AGTGGTGATAAGGGAGAAGAGGATGAAGGGGAGGAATCTGCAGGGGATGA
CAGTGATGATAATAACTGTGATAATTGTGACAGTGACGACGATGAAAATG
ATGGTGATGATGGTGATGATGATGATGATGATGATGATAATGACGATGAT
GGTGATGGTGTTGAGGGTGGTGATGACGGTGATGATAGTTGTGATAAACG
TGGTGATGGTGATGATAATGATTATGAAAGTGATGATGAAGATGGTAACG
GTGGAGGTGAAGGGGAAGGGGTAGAGAATGAACATGCCGAGACGCGATGG
GGAGGAGAGGAATGGGAGGATGGAGAGATATTTCACGAGGGTGCCTCCTT
TCCATTCCTCTCTCTCTCACGTGCAGAGGCAGAAAGAGCGGTTGAGGCAG
AAAGAGTGGTTGAGGAGCCGGAAGACGGCGAGCAAACTCCAACCACGGAG
GTGGAGAATCTAGAGAGTGTGACAGGCTTGATCCCATCTCTTTCTCTCCG
CACTTCCTCAAATCCGCCCTCGTCAGTTTTTCCCGCGTCTCGACATGTTT
GTGAGGTGGCATCACAGGAGAGGGAGGGAGGGAGGGAGGGAATGGGAAGA
GAGGGGGGAGAGGAAGGGGAGGGAGAGATGGAATTTTCACCGATGGCACA
CACCGGTGCTGTCTCTCCTGCTAACTCCTTGGGGTCCTCCTCCATATGCT
CTCTCGCTAGCTTGTTGGAGGAAGCCATACTGATGCTATTTGGCTCTGAT
GAGGAGGAGGAGGGAGAAGGAGGAGATGGAGGAGATGGAGGAGATGGAGA
AGAAGAAGGAGAAGGAGAAGGATTGGAGCCCCCTCCCCTTTCTTTTAGGT
CTGATGATGACCTCAGCAACATCGACCAGGCCATGATGGATGAAATTGAT
GAGGAAATCCGAAATGGTAGGTTGATTGAAACTGGAATCGGAGGAATAGA
GGAAGGGGAGGGAGGCGAGTCAGAGCATGAGGTGCACTTGGTGCAGCGGG
ACGGTGGGATGGTGCCCACTCCCTGCTTGCCCGCGTCTCTTTCCGCTCCC
ATATTTGGTGGGGTTGAGGGAAGAGGGAAGGGGGGAGGGCTGGGGCCGCA
GGAATCACTATCGTCTCAGCAGTCTTGGAGTGCCGGTAGCGCACATCCTG
CTCCCTTCAATCCCGTGCTTGGGGATGACGGTGGTGGTGGAGGAGGAGGA
AGGGAAGGACAAGGATGTAGTTCTTCGGGTAGGAGAATAGTGCGTGGGGT
GGCTCCTCGCCGTCTCAGCAGCAGCATCAGTGGTATGTGTGGGATGGGGC
CATCCGTGCTTGAAAGTGACGGGAGTAGTGGAGGAAGAGGAGGAGGAGAA
GGAGAAGGACGCATTTCTTTGGGTAGGAGAATAGTGCGTGGGGTGGCTCC
TCGCCGTCCCGGCAGCAGTGGCAGTAGAGTTGGTGTGTGTGGGATGGGGC
AATCTGTGCTTGGGCGTGGTGGAGGTGGAGGAGGAGGAGGACAAGGTATT
TCTTCGGGTAGGAGGATTGTGCGTGGGGTGGCTCCTCACCGTCCCAGCAG
CAATTGTAGAGGCAGTAGTGTGTGCGGGATGGGACCCGTCATTGTTGGGC
GTGACGGTGGTGGTGGAGGAGGAGGAGGAGGAGGAGGAGGAGGGTGGGGT
CTGCCACAGCAATATGCTCCGCGGTTGACGCCCGCTATTCTCCCCTTCTA
CCCTCCCTCCGACTCCTCCTCGTTCTTTTACCTCACGCCAGTATCTGAAC
GGGGGGCGGGAAGAGTAGGAGAAAGAGGAGGGGGGCAAGGGCATGCTTTT
GGCTTGGCGACCACGGCGCCGTTCATTTCTCCCCTTACCTCCGCTCCTCC
CTCTCCCATAGTATTTAGCGATGGTAGTGTTGGGGTTGGCGGAAAGGGAG
AAAAGGAAAGACAACGAGAAGAGGGGGGGCATGAGCAAGAAGCGCGAACG
GCGTCATCCAATCAACCCCCCTCTATATCTCTTTTCGTGGCAGGCTATAA
CGGTTCTGGAACTAGACGGGGAGGACGAGGAGGAGCAGTAAGGCAAAGAG
GGGGAGACTCTCGCACTCGGAGTCGCGGGGCTCGTGGTGGTTCGAGACGC
AGCGCCGGTGGTGGTGCTAGAATCCTCAATATCCCTTCCTCATTTCCTCC
TTCCTCGGTCCCTCCTTCCGCTTACGTGTCTGGTGACGAGGCGGGGGGGG
GTGATGGACATCTCGCTCTTAGTGATTGGGACGAGGGGGAGGAAGACGTG
GAGTACGAGGAGGTGGGAAAAATGTGTGAGGCAAGGCTGGAAGCCGCTGA
TGGAAGCGCAGTGGGAGGAGACGGAGGTGAACCGAGCGACGAGGGAGAGG
AGAGGGAGGGTGCAGTGGAGGAAGAGGAGGAAGAGCTGGAGGAGGGAGAG
ATCAGGGAGGACGTCCCGTACGTGTTTAAAGAACGACGCGGGACAAAGAG
GAGGAGGAAAGAGAGGAAAACGAGGCGACAAAAGAAGAGGGTCAAATCAC
ACCACCCGCCGGAAGACGGAGCTTCGGAGCACGGCGGCAAACGTGGGAGG
GATGATGAGGTGGACGATGAGGCGGCTGTCCTTCTCGCTGCGATGCGGGG
ATATAACACCGAGGAAGGGGGGGGCTTAGGGAGGAAGGAGAGGGAGAAGG
AAGAGAGAACTAAGGGAGGCGAGGAGGCGGCAGTAGGAGTAGTTGCTTCT
GTGCTCGTTGGATTGAGGGGCAACACAGAAGGAGAGAGGGCTGGAGGGGA
AAAGTGA
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protein sequence of NO27G01230.1

>NO27G01230.1-protein ID=NO27G01230.1-protein|Name=NO27G01230.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1782bp
MAIALRAVVGAMVLQYYLCVFTLARVCLYASADVAPNAGPSIIIRPESER
VQPQQWWQQEPPQEQQQQKGKKGKKPPPKFNHWIYNVVPPIRSYQNGGSW
EMTEDLIKRILEAEGPTWRAKYAWRFVWLLEEVWAVLWASLKALQVTGSA
LWAMIGVLIVCSTWYQCKLVLIELKEARRERKNLSEHMIRWLDEADEWRR
RMEDTRGGEREDSKDCECCFCDALEPSGDMGEKEGTGDAVAGNLQQQQQQ
QQLLGIATNVPLEGSTSCAQEATQRLQRHHNHYHHSHSHHHHYHHHYHYH
FHHYYRYNHHQHHYHHHQQQQQQQQHEQQHQQQHQQQNHYPYQQQQQQQQ
QQRRRRRQRRLLNGPLSQSEPSMLTAAVSSTPSPWSTGPSVGSRQRPEQQ
QQGQVSHPQVASSREVVSLPSLLSSLRAQLIWHGFSPSMPLSSSFSMLAA
LSEKERREKIEGEGEEETKGNANEPLTLICSSFLPPIFSSFFIDVEQHRQ
LVAVKVSGPIPAALPVAAAASASFTGVLASSVPPFLPPSLQQDAEVTFTP
SSPFSLSQEASSVLDASSTLTTTVVAPAVAATAVAETEDEFGFGAEDGDL
QELQASFAREAAICPFSTVGSEIWSKQAEKEQREEGEQEEKDGTGEGRRC
VYVAVDIDAPLVDMPGGESEENADDKEPEESAETKAIFSFGLSSSSSSRY
SYSDVSWSYFIISRTANDHSASTSSAAYPPSFPSPPTPLDLIEALPAVSN
SPLPTPIAVEEDDSLVYSFSSSSPSSTSSSDALGRQDIDEMEEWESSQFQ
QEQQLQGHQDQQLLDEVEDWELECRHREFGSRMPDSISPLAYLPHPLSDG
SLALRLGGGNLFNSGDKGEEDEGEESAGDDSDDNNCDNCDSDDDENDGDD
GDDDDDDDDNDDDGDGVEGGDDGDDSCDKRGDGDDNDYESDDEDGNGGGE
GEGVENEHAETRWGGEEWEDGEIFHEGASFPFLSLSRAEAERAVEAERVV
EEPEDGEQTPTTEVENLESVTGLIPSLSLRTSSNPPSSVFPASRHVCEVA
SQEREGGREGMGREGGEEGEGEMEFSPMAHTGAVSPANSLGSSSICSLAS
LLEEAILMLFGSDEEEEGEGGDGGDGGDGEEEGEGEGLEPPPLSFRSDDD
LSNIDQAMMDEIDEEIRNGRLIETGIGGIEEGEGGESEHEVHLVQRDGGM
VPTPCLPASLSAPIFGGVEGRGKGGGLGPQESLSSQQSWSAGSAHPAPFN
PVLGDDGGGGGGGREGQGCSSSGRRIVRGVAPRRLSSSISGMCGMGPSVL
ESDGSSGGRGGGEGEGRISLGRRIVRGVAPRRPGSSGSRVGVCGMGQSVL
GRGGGGGGGGQGISSGRRIVRGVAPHRPSSNCRGSSVCGMGPVIVGRDGG
GGGGGGGGGGGWGLPQQYAPRLTPAILPFYPPSDSSSFFYLTPVSERGAG
RVGERGGGQGHAFGLATTAPFISPLTSAPPSPIVFSDGSVGVGGKGEKER
QREEGGHEQEARTASSNQPPSISLFVAGYNGSGTRRGGRGGAVRQRGGDS
RTRSRGARGGSRRSAGGGARILNIPSSFPPSSVPPSAYVSGDEAGGGDGH
LALSDWDEGEEDVEYEEVGKMCEARLEAADGSAVGGDGGEPSDEGEEREG
AVEEEEEELEEGEIREDVPYVFKERRGTKRRRKERKTRRQKKRVKSHHPP
EDGASEHGGKRGRDDEVDDEAAVLLAAMRGYNTEEGGGLGRKEREKEERT
KGGEEAAVGVVASVLVGLRGNTEGERAGGEK*
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Synonyms
Publications