NO27G01220, NO27G01220 (gene) Nannochloropsis oceanica

Overview
NameNO27G01220
Unique NameNO27G01220
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length6966
Alignment locationchr27:391153..398118 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr27genomechr27:391153..398118 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO27G01220 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR044ncniR044Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR093ngnoR093Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO27G01220.1NO27G01220.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|673639gene_8711Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO27G01220.1NO27G01220.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO27G01220 ID=NO27G01220|Name=NO27G01220|organism=Nannochloropsis oceanica|type=gene|length=6966bp
GTTCTGTTCTCCATTGATTTACTTGAGTGTGTATGGTCGCCGGTGAAACT
GAAAACTTGTTGAGGCGTCCGTAATGAGAGAGCCAATAGCGTTGACTGGA
GTGTGTGCTTCCCTTTTTTCCGGTCGCTCTCTTATTTCTGCTCCTTTCTC
TGCTCATTGTGTGTTAGGCATCAGGAGGAATTTTATATGGTTTGAGGGGT
CTTTGCGCACGTTCTCCTTGTTAATATTTCACACGGTAAAGATTACGATC
GATCCGTGACCGAGCAGTATAAGACACTTGAATATATGCAAAGACAAGGA
AGAGGAGGTAAAAATGGAGGGTATGGTCCCACCGTGTACAGAGTCGCAGA
TCCGGAAGATTATCCATACTAGACAAAGGTACTTAGAAGTTGACAAAAAA
TGAACGTCGGAATTATGAGCATGTCCTCAATTTCTGGGAAACCAACCCAT
GGCAGCCAGTTCCACTTCTCCTAAGGGGAAGAGAGGAAAAGAGCTGGGGG
ATAGCGAGCGATGGGAGGAATAACGATTATTGGAAACACTAGGAAATGGA
TGCTTAAATTTAATGAGATAATTGTACGTGTCCATCCGCCTCTGTCGTAA
TAGGGTGTATATTGACTTTGCTGAGCTTTATGCAAGGAATTTTGGGGGGT
AGGGGGTTATTGTTCCCGCCCTCCTTCATCTTCTTCATCTCCTCCTCCTC
CTCCTCCTACCCCTCCTTCTTCTCCTTCTCCTTCGTCTTCACCTCCTTCT
CCTTCTCCTCCTCCTCCTCCCTTCCTTCTTATAATTTTTCTTATCATACA
AGCGCAAAGAGGCGAATATACCACTGCCCTCTCCCACTTTATTACTTCTT
GTTGCGGCACGACCGCTTACCCCCCGAAAAAAAATTTCCCTGATCACGAC
ACGCCGCCTCAACCCCCCACTCGGTCACACACACACGGCACAGACCCGAG
CGAGCCAACAAAAAGACAGCATTTTCAATAAGCACATGGCAACACGACGC
GGTGGTGGGGGCGGCTTTGTTTTTCAAAAGGCTGGTCGAGGACGCACGCT
TGGAAGCAGCTGCACAACGACGACTACCATGCAGGCAGCGCCGGGTGCAG
ACACCTACTCCGTACGCCTCGTTAGCCCAACGCGTGGTCGTGAAGGTGAT
ATGACAAGAGGACAAACAGAAGGAGGGCGAGGAGGAGGAGGGCGGACAGA
GAATAAGCGGGCCCTCCTCTTCATGGGAAGCGAACCTGATGGGGAGCTAG
ACGACGACGAGGAGGAGATCGAAAAGGGGGAACGACGAGGAGGGGGAAAA
GACGGAGAAGGGGATCATGGGGGCAGTGGAAGTTATCACGGTCCCCCTCT
TCCCCTTGGCGGTGCCGCTGGCGCTAGTGCTGCTGGTGGGGCCGGTTTCC
GTATGCCTGTCAAGGCCGCCACCCCTTCCTCTCCTCTCTCCTCCTCCTCC
TCTGGCTCGCTCTCCCAAAGCTCGCCCACAACATCCTCCTCCTCCTCGCT
GTCGCCCTCCCCTAGTGATTTGGACCTAGAGCCTGACACGCTGCTTGTCC
TCCCTCCTCATCACCCTCACCACTACCAGCAGCAGCACAACGACCAGCAG
CGACAGCGGCAACATCCTCGCACCAATCAACATACCCGCCGGGCGGAGGA
CACCATGGCTGCTTCTATCATAGTTAAGATGGCATCGCCTTTGAGAGGAG
GGGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGGAGAGAAGGAGGAGGA
GGAGGGGAGAGTCCCTTAACCCTCCTCCACTCGTTCAAGCATAACTTCGC
AGCGGTCAACGCACGGCTGGCCCAGGCCCAGGAGGAGCTTTTGGCGAGGC
AGGCACAGGTGGAGGCGGTACAACAGAACGTCGTTATGGTCATGCGAGAG
AACGGCGAGCTGATGGCCATGCAGCAGGCGAGGGAGAGGGCATTATGGGA
ACTTGCGCAGAGGAGGGGCCAGGTGGAGGTGGGCGTGGCCCGGCACCAGC
GGCTTGGGGAGGAGGTGGAGGAGGCGATGGAGGAGGCAAAGGAGGTTTTG
AGGGACAGAGAAAGGGAAGGGAGGGAGGTGCTGGGGATGGTCAGGGCGCT
TGAACGGGAGGTGGAGCGGCTGAAGGCGAGGAGAGACGAGGGTTTGAGAA
GGAAGGAGCAGGAGGAAGAAGGAATACAGGCCGAGCTGGCGGAGACTGCA
GCAGTACGGGAAAAGACGGCGGCAGCCACAGTCGAGCTGGAAAAACTGGA
GAAGGAGATGGTGCGCTTGGGGCAGGCGCTGGAGGCGAAGGTGGAGGAAG
CGGAGGGAGAGGAGAATGAGATCTCGAAGATGGTGGCGGAGGCCCAACAG
ATGGAGGAAGAGGCCACAAAAGAGATCAACGTGCGAGAGGACGGGAAGGT
ACACGCAGCAGCTGCAGCACTGGAGGAGAAGGTGACGCTGTCGAGGATGG
AGGAGGAGCTGGAGCGTCTAAAGCAGGCCCAGGAGGAGAAGGAGGCTGAG
CTGGCCCGGCTGGCAGAGGAAAGGAAGAAGGCCGAGCGGGACGAGGAGGA
GATGAAAGAGGACGTGAGTGTGCTGGGCAAGGACTTGGCGGTGCTAGAGA
AGCGGATTGAGGAGGTGGAGATGGAGGGGGCGGGGGCTGAGGAGGCGGGA
TTGCAGCTGCAGGCGGAGTTGGGCAGGATGAGGGGGGAACTATGCAAGGT
GGAGGATGAGGGGAGGGGCCTGAGGGAGGAGCACACACGGGCACTGCGCC
GGCTGTTTCTTGTCGACCGGCAGCTGAGCAAGGTCAAGAAGGAGCTGGAG
GAATGGGAGGGAACGAGGCAGGGAAGGTTAGCGAGGGACATGGAAGAGCA
GGTGCGAGAGGCAGAGAAGAAGCTAGAGGGCCAATTGGACGAGAAAGTGT
CGGGCTTGGAGGAGGAGGCGAGGCAGAGGGAAAAGGAAATTGGAAAGAGG
GAAAAAGAGCGGGGGATGAGGGAGCGGTGTAGGGCAAGTAGGGAAGAGGT
GGAGAGGTTGATGAGGATTAGGAGCGAGAAGGTTGCAGGGGAAGAGAAGA
AGATGCGACTGGAGGAGACCATGAAGGCGAAGGAAAAAGAGGAGGTACGG
TACGCCCGCGAGGAGGAGGAGTACAGTGCACGCCTGGCAGCAGCTGACGC
ACAGCTGGGCGCACTGCTGGTGCCCTTGAGCTTATTCCAGGCCCGGCCTC
TCTCTCGTCCTTCCTCGGCGGCGAGTGCTGGGGGACCGGCTACGCGCGCG
TCGCTGCGGCAGCAGCAGCAGCAACAGCCAGGGGAGGAAGTAGGGGATAA
AGGGGGGGAAGAAGGTGAGAGAGAGCCGACGGAGGCCGAATTGGCTTGGC
TGGCAACAGAGGAAGAGAAGGGAAGAGCGAAAGTAAGGGGGGAGGTAGAG
GAGGCGTACCGGGAGGAGATTCGGGAGAGGGAGGCGGCGCTTGAGGAGGC
GATCAGGCAGGCGGGCTCGAGGGAAGAGTGCGAGGCGCGCTGGAAGGAGA
ACCTGGCTCGAGCAGCTGAAAGAGTAGAGCAATTGAGGGAGGAGCTGGAG
CAGGGAGGAATGGAGTGTGCGCTATGGGAGGGCAAAATGGAGAACGGCAT
GGTGGTCGATGAGGGGGAAAAGAATAAGAAGGAAAAGAATGATAAGGAGG
AGGGGAACGATGGTGCGGAGAAGCAGAAGAAGCAGGAGGAATACAACAAG
AAATTGCGGACCGCAAAAGAGTCAACAGCAGGCAAGACGGCGGCTACTGC
AGCGGGCAAGGCCCTGGAGGCAGAAGAGGGGTGCGAAGAGGACGAAGAGG
ACGAGGGCGAGGGCGAGGGCGAGGACGAGGGCGAGAATGAGGACGTGATT
GCAAAAGCAGGGAGGGGAAGGGGCATGGTGGTTAGGGGGGGGGAAGGAGA
GGAGGATGACACGATGACTTACGAGTTAGATGACGAGGAGGGGAAAACGC
CTGCCATGGCGATTGAATTAGATGCGGAGGAGCTGGTGGTGGATGCCATG
ATGCATGAGGACAAGGATAGGGATGATGAGGAGGGCCGCCAGGAAAAGGA
GAAGGAAGAGGGGGAGGAGGAGGAGGAGGAGGAGCAGCAGCAGCAGCAGC
AGCAGCAGCAGCAGTTTCACCGGCAGCACCTGGCCTCATATATGCCACAC
TCCCGCCCTCATCCCACTCCAAGCCCTCAGCAACAATACCGTAGGAAGAC
GGTGCGTCGCATTCCTTCCTCGTCTGGCGCTCACCACTGCCACGACGAGG
AGGAGGATGAGGAGGGTGGAGAGTCCGTCCGTCTGCCTCCTCCCCGCGCT
TTGTCCTCATCCCACAATTACTCCCATGGCAAGTCGTCGCAGCAGCAGCA
ACAACAGCAGCAGTGCCGCCGAGACAGTGAGAGTGCAACAAGGATGCGGC
CTTCCTTCTCTTCCTCTTCCTCCTCGCCGAAGGACCCAGATCGCACATGC
TCCGTCCCTCCTGCCCACGCCTTTTCTTCCTCCTCCGCCACGCCCCATCT
TCCGTCCCGATCTCGCCACTCTCAGCACCATCAGCGGGAGGGGCGGCTGC
GAAAGCACCAGCAGTGCCAGCCCATCGGATCTCTCCCTCATCGTAATGCG
GCAAGGGGTGGTGGTGCCGCGCGTCCTTCCTTTCCCCCTCCTTCCTCCTC
CTCCTCCTCCTTGTCTTCCTCTCGTGGCCACCATCACCTGCACCATCAGC
ACCAGCGCCGTTACCACTACCCCTACCATTACCATCAGGAGAGAGAGGAA
GAGGAAGAGGAGGAGGAGGAGAAGCAAGAAGAGGAGAAGCTGGACCGGGA
AGAGGGTCTAGAGGTCGAGGCGGCGGGCGTGTTCAGCGACAAAGTGGAGG
AGGACGTGGACGAGGAAGAGGAGGACGAGGTAGAGAAGGAGGAGTGCTTG
CATGCATCCCAGAAAATTGCCCGGGCCATGGAGCAGGCCCGCGCTGCCAA
GCGCATCCAGCAGCAGAAGCAGCAAAAGCAGGCGCGGAAGCAGGTACTCA
TCCCCCCCAAGCTCAAGAAGAGGCAGCAGGCGAGCAGCACCAGCACCGCC
AGTAGCAGCGGCAGCAGCAGCGATCTGGCGAAGCGTCGGGCACTGAAATC
GTCCACGCAGCAGACAAAAAAGAGAAAATGGGGAGCGGGGGGGCTGGGGA
GAGGAAGAGGCGAAGGAGGGGAAGGGGGGGCAGTCCCCGCGCGAGGGAGC
TACCGCATGTCCAAGAAGATTGTGATTGAGGAGCACTTCACAGAGGGAGC
GCGGGAGGCAGGATGTGGAGGAGGGAGAGGAGACGAATGGTTTGCCGACG
ACGCATACAATTTTTAGGAGAGAGAGGAAAGGTGGGAGGACGGAATGGAG
AAAAGGTTGTAGGGGAGGGCGTGAAGAGAGAAAGAAAGGGAGGGAGTGTA
TATACATGTATCTGTGGTTGGTCGGCAAATGCGGAAAATGCGTGCGGTAG
GATAAGTAAGGACTGAAGTAGGGCTTGACAGGGAGAGAAAGTGTGTGTAC
ATGCCAGTGTATGGGTGCCGTTTTGGCAGGCAGCTCAAAGGAGAAGGAGT
GACAGGAAGAAGGAGCGTGAGGGCGAGGGAAGGGATGCGAGGTGGACTAA
CTGACATGAAATAGGGGGGAGGCGATAGCAAAAAACCTTGTTGTGACACG
CCTTCATGCAACCCTTTCTCTTTTTCTATTATCCTAGCGTTTGCCGAAGA
CGAGTACTAGTGCGTCGTTACATGAGTGAGGTAAAGATCCGAAAGAAAGG
AAGGAGAGTAAGAGAGGAAGACCAAGAAACGAGGGAAATGATGAACAGGA
GGAGGCGAAAAGACGACATCCAAGTGTTTGATAAAAGAAAGTGAGGCAGC
AAGATGGGAGAGTAAGCGCGAGAAAGAGAACGAAGGAGAGCGGGATCTCC
ATCTCGTCCTCCTCCGCCACATCCATACCCTCCTCCTTCTCCTCCTCCAC
CTCTTTTCCCCGGCAGACGATGTCGAGAAATAATTGGAAGCAAATGTTGA
ACAAGCAGCATAACAGTGTGGAAAGGGAGAAAGAGAGAAATGAGGGGTTT
GTGAGGCTAAGAGGAAGACTCTGACCCCATTTCGTCTTCTTCTAGACGTG
TTGACCTTACCCCTGCCGTTGATCCGTCGTATAGTTGCAGAGAGCATAGC
AAAGGCAGTAGCAGCTGCTGCAACAACCGTGACAAAGTGAATGACAACAG
CTTCACCGAAGATGTAATATAACCTACCCTAGAGGCTCAGCATGGCGGGT
GTACATCTAACACCAGGCCTCTCTTTTTCCACCTTAACTGCCCTTGATCT
CTTTTCCTTACTTCCACACAGTATTCCTTTTTTTTCCTTGCGGGCTATTG
TATTCCTCTCTCTTACTTTCATTGTCATATGCCCTTTCTTATCCTTTCGT
GCTCTATCGCACATCGCCCACATATCTACAACTACCTATATCTTGCCGCG
AGGAAAAATCTTTCTTGCTTCACAAGCAACCGGTACTTTATGCTTGCGCA
ACAACTGGTGTATCGTCATCCAATCCCGCGTACTGCCTGCCACAAGGACT
TACATCACTCTTGTAGTGGCGGAATGCAGGCCGGGGCTTTTAGTAATCCT
TGTACCTGTGTTACGGGCTATATCCCTTTGACTGAGGGTCCACAGGGGAT
CAGGGGGATCCATGTCCCCTCGAGCTTGACTGAGGATCCATACGGGGTCC
ATGCATTGTGCGGTTAGTGATATGAAAACGGGTGGTATCTGTGTGTGCGA
GTATGCACGAGTTGTGCTCGGAAAAGACTAGTCGCATTTTCCGTTCTTTC
GTGTGCATATCGGTGCCTTGCCTCTCCTTCTGTATATCAGATACTTTTAT
GATCGATCAATACATGGACGATAGGTAGACTCGTGGCCAGGTTTCTCCCA
CTTGTCGCTTTAAGAGAAGCGAAATGGTCGGGCACATAAAAGGGCGCCAG
GGTGAGGAGGTTATCC
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protein sequence of NO27G01220.1

>NO27G01220.1-protein ID=NO27G01220.1-protein|Name=NO27G01220.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1444bp
MATRRGGGGGFVFQKAGRGRTLGSSCTTTTTMQAAPGADTYSVRLVSPTR
GREGDMTRGQTEGGRGGGGRTENKRALLFMGSEPDGELDDDEEEIEKGER
RGGGKDGEGDHGGSGSYHGPPLPLGGAAGASAAGGAGFRMPVKAATPSSP
LSSSSSGSLSQSSPTTSSSSSLSPSPSDLDLEPDTLLVLPPHHPHHYQQQ
HNDQQRQRQHPRTNQHTRRAEDTMAASIIVKMASPLRGGGGGGGGGGGGG
REGGGGGESPLTLLHSFKHNFAAVNARLAQAQEELLARQAQVEAVQQNVV
MVMRENGELMAMQQARERALWELAQRRGQVEVGVARHQRLGEEVEEAMEE
AKEVLRDREREGREVLGMVRALEREVERLKARRDEGLRRKEQEEEGIQAE
LAETAAVREKTAAATVELEKLEKEMVRLGQALEAKVEEAEGEENEISKMV
AEAQQMEEEATKEINVREDGKVHAAAAALEEKVTLSRMEEELERLKQAQE
EKEAELARLAEERKKAERDEEEMKEDVSVLGKDLAVLEKRIEEVEMEGAG
AEEAGLQLQAELGRMRGELCKVEDEGRGLREEHTRALRRLFLVDRQLSKV
KKELEEWEGTRQGRLARDMEEQVREAEKKLEGQLDEKVSGLEEEARQREK
EIGKREKERGMRERCRASREEVERLMRIRSEKVAGEEKKMRLEETMKAKE
KEEVRYAREEEEYSARLAAADAQLGALLVPLSLFQARPLSRPSSAASAGG
PATRASLRQQQQQQPGEEVGDKGGEEGEREPTEAELAWLATEEEKGRAKV
RGEVEEAYREEIREREAALEEAIRQAGSREECEARWKENLARAAERVEQL
REELEQGGMECALWEGKMENGMVVDEGEKNKKEKNDKEEGNDGAEKQKKQ
EEYNKKLRTAKESTAGKTAATAAGKALEAEEGCEEDEEDEGEGEGEDEGE
NEDVIAKAGRGRGMVVRGGEGEEDDTMTYELDDEEGKTPAMAIELDAEEL
VVDAMMHEDKDRDDEEGRQEKEKEEGEEEEEEEQQQQQQQQQQFHRQHLA
SYMPHSRPHPTPSPQQQYRRKTVRRIPSSSGAHHCHDEEEDEEGGESVRL
PPPRALSSSHNYSHGKSSQQQQQQQQCRRDSESATRMRPSFSSSSSSPKD
PDRTCSVPPAHAFSSSSATPHLPSRSRHSQHHQREGRLRKHQQCQPIGSL
PHRNAARGGGAARPSFPPPSSSSSSLSSSRGHHHLHHQHQRRYHYPYHYH
QEREEEEEEEEEKQEEEKLDREEGLEVEAAGVFSDKVEEDVDEEEEDEVE
KEECLHASQKIARAMEQARAAKRIQQQKQQKQARKQVLIPPKLKKRQQAS
STSTASSSGSSSDLAKRRALKSSTQQTKKRKWGAGGLGRGRGEGGEGGAV
PARGSYRMSKKIVIEEHFTEGAREAGCGGGRGDEWFADDAYNF*
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Synonyms
Publications