NO27G01050, NO27G01050 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO27G01050 vs. NCBI_GenBank
Match: EWM20993.1 (myb-related 3r-1-like protein [Nannochloropsis gaditana]) HSP 1 Score: 350.9 bits (899), Expect = 9.500e-93 Identity = 264/743 (35.53%), Postives = 325/743 (43.74%), Query Frame = 0 Query: 3 SQNRKRKSSKGEETMPEDGR----QEDKAAAAAEGQGARFWFEEHDEKLRAAVMVEGPRNWKKIAEDYFGNEYNDTQCLNRWFKVLRPGLIKGPWTVEEDAIIVQCMQSGLTKWADIAGRIPGRLGKQCRERWLNHLDPNVKKDAWTFEEDAILVEGQKRYGNAWATIAKLLPGRSENAIKNRWNSATHSKMRHARGRPATGSAVAGATGCERSAVPRPYPSPPACPQWDYALEVSMVQSYCRHLLSSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNYTSPTAKMMTAPLEEISDFIPCVMNALQQAKPTTYGFIVSSSPSSSSSPFPSFHLSSSQLKSLHARLWVALEKEAHRQGPDSCLYHTVSRATNKKRMKQSTFLEASDAGTLTCSSLSVGGTGRQKHESSTVLSAAAAPGTFTSPLVAAPSSKVTTVTENC--------KETEAAVSVVLGQGRPKDVCEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPRPKAHISLTVPHNAANPAPSHS------------SPXXXXSFSAVEEHSGLQSLASAVSSLCTPMSMDGNTDHGRGSISTCKLALSSFPQXXXXXXXXXXXXXXXXXXXXKPLLVPSQCMRDVISLLFFAVRQEEDGARRGLLQDALHAATQEVPAMVNLVEGVLGCTGSGFSLTNEDDRLFLLDHLMTATHRGVFGP 722 S RKRKS++ E ED R ED+A W +E D KLR V GP+NWKKI++++F Y DTQCLNRW+KVLRPGL+KGPW EEDA+I+QCM+SGLTKW++IA RIPGRLGKQCRERWLNHLDP+V K AW+ EED L+ GQ R+GNAWA IA LLPGRSEN++KNRWNSA +++R + R SPP P WD LE V+ YC + + S KM + +++DFIP VM AL+ A P YG L S+ +K LHARL V LE+EA + GP LY +V R KK A T L + PGT P A + EN ++ + + LG+G P DV A P + L++P + P P S S S S +SGL+SLA AVSSL SM + T + P SQ MRDVISLLF A+R+E D +RR LLQDAL AATQE+P+MVNLVEG LG FSL E DR+F+LD LMTA HRGVF P Sbjct: 99 SNGRKRKSARNEVKEGEDPRLVSVDEDEADPGPS------WTDEQDAKLRKVVASRGPKNWKKISQEHFQGLYTDTQCLNRWYKVLRPGLVKGPWLEEEDAVILQCMRSGLTKWSEIAERIPGRLGKQCRERWLNHLDPSVSKSAWSLEEDKALLAGQARHGNAWAKIADLLPGRSENSVKNRWNSAAMARLRGSVDR-----------------------SPP--PDWDEDLERQTVREYCLRMAEAVGASEPQEGMARAAGAWPPAS--------------DSSIRKMSS----KLADFIPSVMGALEGANPGLYG-----------------GLGSAHIKPLHARLRVMLEREAEKYGPTHALYRSVLRRAQKK-----------SAATTLGPKLXXXXXXXXXXXXXMPKLWSCFPGTAMLPAAAPAACPEKLFLENAPQAFRKRTRKDDQGAADALGRGSPLDVSSA--------VPLLHQLRMEPSPQTCHVPAQGKEPSDKASSKHHRSHEEPVMSSISPVNYEASQKGPTQRRESPPFKRDESFLSIP---SKPMPRDSDALAYMTSSSLCSSAGTPSPSIEHAYSGLKSLALAVSSLSGLTSMSAPKHNNIRPDFTPGYTTYKREEQTQEQHVLSRGARLPAEAVATPSPSQSQGMRDVISLLFAALRREADTSRRTLLQDALDAATQEIPSMVNLVEGGLGSNAGIFSLARESDRIFMLDQLMTAAHRGVFRP 753
BLAST of NO27G01050 vs. NCBI_GenBank
Match: GBG33445.1 (Transcription factor MYB3R-2 [Aurantiochytrium sp. FCC1311]) HSP 1 Score: 215.7 bits (548), Expect = 4.800e-52 Identity = 92/159 (57.86%), Postives = 120/159 (75.47%), Query Frame = 0 Query: 29 AAAEGQGARFWFEEHDEKLRAAVMVEGPRNWKKIAEDYFGNEYNDTQCLNRWFKVLRPGLIKGPWTVEEDAIIVQCMQSGLTKWADIAGRIPGRLGKQCRERWLNHLDPNVKKDAWTFEEDAILVEGQKRYGNAWATIAKL-LPGRSENAIKNRWNSAT 187 A + +G+ W + DE L+ AV + G RNWK+IA +Y + D QCL+RW KVLRPGL+KGPW EED I C++SG+T+W++IA R+PGR+GKQCRERW NHLDPN++ D WT EED +L+EGQ + GN W+ IAK+ LPGR ENA+KNRWN+AT Sbjct: 126 AGSGKKGSGRWTKAEDESLKLAVKLVGARNWKRIASEYLADTRTDVQCLHRWQKVLRPGLVKGPWQPEEDETIRACIRSGITRWSEIATRVPGRIGKQCRERWFNHLDPNIRTDEWTEEEDQLLIEGQSKLGNKWSQIAKIYLPGRPENAVKNRWNAAT 284
BLAST of NO27G01050 vs. NCBI_GenBank
Match: EWM26309.1 (transcriptional activator myb [Nannochloropsis gaditana]) HSP 1 Score: 213.0 bits (541), Expect = 3.100e-51 Identity = 110/218 (50.46%), Postives = 143/218 (65.60%), Query Frame = 0 Query: 9 KSSKGEETMPEDGRQEDKAAAAAEGQGARFWFEEHDEKLRAAVMVEGPRNWKKIAEDYFGNEYNDTQCLNRWFKVLRPGLIKGPWTVEEDAIIVQCMQSGLTKWADIAGRIPGRLGKQCRERWLNHLDPNVKKDAWTFEEDAILVEGQKRYGNAWATIAKLLPGRSENAIKNRWNSATHSKMRHARGRPATGSAVAGATGCERSAVPRPYPS---PPA 224 KS K E+ R+ ++ G + W +E D LRAAV +GP+ WK+I++++ + +D QCL+RW KVL+PGL+KGPWT EED II++C+Q G KWA IA IPGRLGKQCRERW N+LDP +KK WT EED +L E Q ++GNAW IA+ LPGRSENA+KNRWNS+T + + A GR AT G ++A YPS PPA Sbjct: 136 KSGKRGIIAVEERRESPLKEPSSGPGGGKRWSKEEDAMLRAAVASKGPQCWKQISDEFLEGKRSDVQCLHRWQKVLQPGLVKGPWTAEEDQIILRCVQEGNLKWAAIADLIPGRLGKQCRERWYNNLDPALKKGEWTEEEDRVLAEAQAKWGNAWTKIARSLPGRSENAVKNRWNSSTRRREK-AAGRAATKKRDLGNQESWKAAA--SYPSVRDPPA 350
BLAST of NO27G01050 vs. NCBI_GenBank
Match: GBG26897.1 (Transcription factor MYB3R-4 [Aurantiochytrium sp. FCC1311]) HSP 1 Score: 212.2 bits (539), Expect = 5.300e-51 Identity = 94/158 (59.49%), Postives = 112/158 (70.89%), Query Frame = 0 Query: 32 EGQGARFWFEEHDEKLRAAVMVEGPRNWKKIAEDYFGNEYNDTQCLNRWFKVLRPGLIKGPWTVEEDAIIVQCMQSGLTKWADIAGRIPGRLGKQCRERWLNHLDPNVKKDAWTFEEDAILVEGQKRYGNAWATIAKLLPGRSENAIKNRWNSATHSK 190 +G G R W E D KLR V G WKKI+E+Y G +D QCL+RW KVLRPGL+KGPWT EED +I C++ +TKW++IA RIPGR+GKQCRERW NHLDP + AWT EE+ +LV Q +GN W IAKLLPGR ENA+KNRWNSA K Sbjct: 169 QGGGGR-WTREEDAKLREGVTAIGATKWKKISEEYLGGRRSDVQCLHRWQKVLRPGLVKGPWTEEEDNMIRACIERKITKWSEIAERIPGRIGKQCRERWFNHLDPTIDHSAWTEEEEKVLVTAQATFGNRWCEIAKLLPGRPENAVKNRWNSAIRRK 325
BLAST of NO27G01050 vs. NCBI_GenBank
Match: GBG27799.1 (Transcription factor MYB3R-2 [Aurantiochytrium sp. FCC1311]) HSP 1 Score: 209.1 bits (531), Expect = 4.500e-50 Identity = 90/158 (56.96%), Postives = 118/158 (74.68%), Query Frame = 0 Query: 47 LRAAVMVEGPRNWKKIAEDYFGNEYNDTQCLNRWFKVLRPGLIKGPWTVEEDAIIVQCMQSGLTKWADIAGRIPGRLGKQCRERWLNHLDPNVKKDAWTFEEDAILVEGQKRYGNAWATIAKLLPGRSENAIKNRWNSATHSKMRHARGRPATGSAVA 205 L+ AV G RNWK+I++++ + +D QCL+RW KVL+PGLIKGPWT EED I++ ++SG+TKW++IA IPGR+GKQCRERW NHLDP++KK WT EED ILVE Q++ GN W IAK+LPGRSENA+KNRWNSA K + R + ++ Sbjct: 2 LKKAVDTIGARNWKRISQEFLNGKRSDVQCLHRWQKVLKPGLIKGPWTKEEDDTIMEAIESGVTKWSEIATLIPGRIGKQCRERWFNHLDPSIKKGGWTEEEDRILVEYQEKLGNRWCEIAKVLPGRSENAVKNRWNSAMRRKFQQKRSKQGAAGVLS 159
BLAST of NO27G01050 vs. NCBI_GenBank
Match: EWM22951.1 (myb-like protein [Nannochloropsis gaditana]) HSP 1 Score: 204.1 bits (518), Expect = 1.400e-48 Identity = 98/202 (48.51%), Postives = 124/202 (61.39%), Query Frame = 0 Query: 39 WFEEHDEKLRAAVMVEGPRNWKKIAEDYFGNEYNDTQCLNRWFKVLRPGLIKGPWTVEEDAIIVQCMQSGLTKWADIAGRIPGRLGKQCRERWLNHLDPNVKKDAWTFEEDAILVEGQKRYGNAWATIAKLLPGRSENAIKNRWNSATHSKMRHARGRPATGSAVAGATGCERSAVPRPYPSPPACPQWDYALEVSMVQSYC 241 W + DE+LR V G NW I+ + ++ + QC +RW KVLRPGL+KGPWT EED IIV C Q+G+T+W +IA R+ GRLGKQCR+RWLNHLDP + K WT EED +L EG++ YGNAWA IAKLLPGR EN+IKNRW SA ++ ERS V A P+WD E ++ +C Sbjct: 165 WTSKEDEQLRKGVTAVGECNWDTISTQFLHSQRSAIQCSHRWQKVLRPGLVKGPWTQEEDDIIVVCRQNGVTEWKEIALRLEGRLGKQCRDRWLNHLDPAISKHYWTEEEDKVLAEGRRLYGNAWAKIAKLLPGRPENSIKNRWYSARRAQ--------------------ERSFV--------APPRWDLKFEKKVISDFC 338
BLAST of NO27G01050 vs. NCBI_GenBank
Match: EWM22952.1 (myb-like protein [Nannochloropsis gaditana]) HSP 1 Score: 204.1 bits (518), Expect = 1.400e-48 Identity = 98/202 (48.51%), Postives = 124/202 (61.39%), Query Frame = 0 Query: 39 WFEEHDEKLRAAVMVEGPRNWKKIAEDYFGNEYNDTQCLNRWFKVLRPGLIKGPWTVEEDAIIVQCMQSGLTKWADIAGRIPGRLGKQCRERWLNHLDPNVKKDAWTFEEDAILVEGQKRYGNAWATIAKLLPGRSENAIKNRWNSATHSKMRHARGRPATGSAVAGATGCERSAVPRPYPSPPACPQWDYALEVSMVQSYC 241 W + DE+LR V G NW I+ + ++ + QC +RW KVLRPGL+KGPWT EED IIV C Q+G+T+W +IA R+ GRLGKQCR+RWLNHLDP + K WT EED +L EG++ YGNAWA IAKLLPGR EN+IKNRW SA ++ ERS V A P+WD E ++ +C Sbjct: 65 WTSKEDEQLRKGVTAVGECNWDTISTQFLHSQRSAIQCSHRWQKVLRPGLVKGPWTQEEDDIIVVCRQNGVTEWKEIALRLEGRLGKQCRDRWLNHLDPAISKHYWTEEEDKVLAEGRRLYGNAWAKIAKLLPGRPENSIKNRWYSARRAQ--------------------ERSFV--------APPRWDLKFEKKVISDFC 238
BLAST of NO27G01050 vs. NCBI_GenBank
Match: GBG27598.1 (Transcription factor MYB3R-4 [Aurantiochytrium sp. FCC1311]) HSP 1 Score: 198.7 bits (504), Expect = 6.000e-47 Identity = 88/159 (55.35%), Postives = 112/159 (70.44%), Query Frame = 0 Query: 39 WFEEHDEKLRAAVMVEGPRNWKKIAEDYFGNEYNDTQCLNRWFKVLRPGLIKGPWTVEEDAIIVQCMQS---GLTKWADIAGRIPGRLGKQCRERWLNHLDPNVKKDAWTFEEDAILVEGQKRYGNAWATIAKLLPGRSENAIKNRWNSATHSKMRHAR 195 W E D LR V G +NWKKI++ FG D QCL+RW KVL+PGL+KG WT EEDA++++ ++ G KW+ IA ++PGRLGKQCRERW NHLDP++KK+ W+ EED IL+E Q GN W IA L+PGRSENA+KNRWNSA K++ R Sbjct: 161 WGPEEDNILRQTVAEMGAKNWKKISQVAFGGRRTDVQCLHRWQKVLKPGLVKGSWTKEEDAVVMRMVEKYGLGNIKWSVIANQLPGRLGKQCRERWFNHLDPSLKKEPWSAEEDRILMEAQSTLGNRWCQIASLIPGRSENAVKNRWNSAMRRKLQSDR 319
BLAST of NO27G01050 vs. NCBI_GenBank
Match: EFJ27664.1 (hypothetical protein SELMODRAFT_411844 [Selaginella moellendorffii]) HSP 1 Score: 191.8 bits (486), Expect = 7.400e-45 Identity = 98/206 (47.57%), Postives = 126/206 (61.17%), Query Frame = 0 Query: 39 WFEEHDEKLRAAVMVEGPRNWKKIAEDYFGNEYNDTQCLNRWFKVLRPGLIKGPWTVEEDAIIVQCMQS-GLTKWADIAGRIPGRLGKQCRERWLNHLDPNVKKDAWTFEEDAILVEGQKRYGNAWATIAKLLPGRSENAIKNRWNSATHSKMRHARGRPATGSAVAG----ATGCERSAVPR-PYPSPPACPQWDYALEVSMVQS 239 W + D+ LR AV +NWKKIA +F N D QCL+RW KVL P L+KGPWT EED I++ + G KW+ IA +PGR+GKQCRERW NHL+PN+K+DAWT +ED L+ +RYGN WA IAK LPGR++N+IKN WNS K+ A A+A + AVPR P+P P P +D +L + S Sbjct: 55 WTADEDDVLRRAVQCFKSKNWKKIAA-FFKNR-TDVQCLHRWQKVLNPDLVKGPWTKEEDDRIIELVNKYGAKKWSVIAQNLPGRIGKQCRERWHNHLNPNIKRDAWTQQEDLALIYAHQRYGNKWAEIAKFLPGRTDNSIKNHWNSTMKKKVDPALANDPISKALADYQLQMEAKQAQAVPRPPHPKIPLAPGFDPSLRQKRIAS 258
BLAST of NO27G01050 vs. NCBI_GenBank
Match: XP_009036871.1 (hypothetical protein AURANDRAFT_7821, partial [Aureococcus anophagefferens] >EGB08368.1 hypothetical protein AURANDRAFT_7821, partial [Aureococcus anophagefferens]) HSP 1 Score: 191.8 bits (486), Expect = 7.400e-45 Identity = 87/154 (56.49%), Postives = 109/154 (70.78%), Query Frame = 0 Query: 39 WFEEHDEKLRAAVMVEGPRNWKKIAEDYFGNEYNDTQCLNRWFKVLRPGLIKGPWTVEEDAIIVQCM---QSGLTKWADIAGRIPGRLGKQCRERWLNHLDPNVKKDAWTFEEDAILVEGQKRYGNAWATIAKLLPGRSENAIKNRWNSATHSK 190 W EE D +LR V G +NWK++A GN +D QCL+RW KVLRPGL KGPWT +ED I+ + +G KW+ IA ++PGR+GKQCRERW NHLDP +KK WT EED IL E Q+ +GN W+ IAKLLPGR+ENA+KNRWNS+ + Sbjct: 2 WTEEEDNRLREIVETFGAKNWKRLAM-LLGNVRSDVQCLHRWNKVLRPGLSKGPWTADEDKIVKDMVLRHGAGNIKWSVIAAQLPGRIGKQCRERWFNHLDPEIKKGDWTPEEDNILFETQRVHGNRWSEIAKLLPGRTENAVKNRWNSSARKR 154 The following BLAST results are available for this feature:
BLAST of NO27G01050 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO27G01050 ID=NO27G01050|Name=NO27G01050|organism=Nannochloropsis oceanica|type=gene|length=2563bpback to top protein sequence of NO27G01050.1 >NO27G01050.1-protein ID=NO27G01050.1-protein|Name=NO27G01050.1|organism=Nannochloropsis oceanica|type=polypeptide|length=727bpback to top Synonyms
Publications
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