NO27G01010, NO27G01010 (gene) Nannochloropsis oceanica

Overview
NameNO27G01010
Unique NameNO27G01010
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2573
Alignment locationchr27:332071..334643 +

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Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr27genomechr27:332071..334643 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
[Close]
BLAST of NO27G01010 vs. NCBI_GenBank
Match: EWM21014.1 (hypothetical protein Naga_100081g23 [Nannochloropsis gaditana])

HSP 1 Score: 258.8 bits (660), Expect = 3.600e-65
Identity = 118/154 (76.62%), Postives = 137/154 (88.96%), Query Frame = 0 
Query:  260 QVDDRFRAEQNWEHPTSVNPACKRTLQIEYWDRTRECKERKWDHMDYIDATYASREEWILQSVLHEEDIVLEDNKFPYNTPKGIRHMTLWARRELSLEDVEAFMSGWMEKEGREGGREVRRWNLDENASRSIQIYHVHVYVQEVPDEDVGLNPS 414
            +VDD  R E+NW+HP S+N  C+RTL+IEYWDR+RECKERKWDHMDYIDATYASREEWILQSVL  ++IVLE+NKFPYNTPKGIRHMTLWARRELSLE+VE++M  W+E+E R G   VRRWNLDENASRSIQ+YHVH+Y QEVPDE+VG +PS
Sbjct:    4 EVDDSLRGEENWDHPASMNAMCRRTLKIEYWDRSRECKERKWDHMDYIDATYASREEWILQSVLPRDEIVLEENKFPYNTPKGIRHMTLWARRELSLEEVESYMIDWIERE-RPG---VRRWNLDENASRSIQVYHVHIYTQEVPDEEVGPSPS 153
[Close]
BLAST of NO27G01010 vs. NCBI_GenBank
Match: EWM21015.1 (hypothetical protein Naga_100081g23 [Nannochloropsis gaditana])

HSP 1 Score: 258.8 bits (660), Expect = 3.600e-65
Identity = 118/154 (76.62%), Postives = 137/154 (88.96%), Query Frame = 0 
Query:  260 QVDDRFRAEQNWEHPTSVNPACKRTLQIEYWDRTRECKERKWDHMDYIDATYASREEWILQSVLHEEDIVLEDNKFPYNTPKGIRHMTLWARRELSLEDVEAFMSGWMEKEGREGGREVRRWNLDENASRSIQIYHVHVYVQEVPDEDVGLNPS 414
            +VDD  R E+NW+HP S+N  C+RTL+IEYWDR+RECKERKWDHMDYIDATYASREEWILQSVL  ++IVLE+NKFPYNTPKGIRHMTLWARRELSLE+VE++M  W+E+E R G   VRRWNLDENASRSIQ+YHVH+Y QEVPDE+VG +PS
Sbjct:    4 EVDDSLRGEENWDHPASMNAMCRRTLKIEYWDRSRECKERKWDHMDYIDATYASREEWILQSVLPRDEIVLEENKFPYNTPKGIRHMTLWARRELSLEEVESYMIDWIERE-RPG---VRRWNLDENASRSIQVYHVHIYTQEVPDEEVGPSPS 153
[Close]
BLAST of NO27G01010 vs. NCBI_GenBank
Match: ETO66603.1 (hypothetical protein F444_16288 [Phytophthora parasitica P1976])

HSP 1 Score: 136.7 bits (343), Expect = 2.000e-28
Identity = 63/130 (48.46%), Postives = 85/130 (65.38%), Query Frame = 0 
Query:  272 EHPTSVNPACKRTLQIEYWDRTRECKERKWDHMDYIDATYASREEWILQSVLHEEDIVLEDNKFPYNTPKGIRHMTLWARRELSLEDVEAFMSGWMEKEGREGGREVRRWNLDENASRSIQIYHVHVYVQ 402
            EH  +  P   RTL++EYW RT EC ERKW HM+ +D  + SREE IL + L  E++VLE N FPY+TP GI H TLW+R E+   ++E F+  W+    R+    V  WN D+N SRSI I+HVH+Y++
Sbjct:   44 EHNATSGPT--RTLRLEYWGRTDECLERKWAHMEMVDEFFGSREEVILATTLSNEEVVLEPNMFPYDTPNGIEHWTLWSRHEMVDTEIEKFVCNWL----RKYAPRVESWNYDDNLSRSINIFHVHIYLK 167
[Close]
BLAST of NO27G01010 vs. NCBI_GenBank
Match: XP_008911408.1 (hypothetical protein PPTG_16325 [Phytophthora parasitica INRA-310] >ETI37835.1 hypothetical protein F443_16295 [Phytophthora parasitica P1569] >ETM37878.1 hypothetical protein L914_15684 [Phytophthora parasitica] >ETN03292.1 hypothetical protein PPTG_16325 [Phytophthora parasitica INRA-310] >ETP35746.1 hypothetical protein F442_16149 [Phytophthora parasitica P10297])

HSP 1 Score: 136.3 bits (342), Expect = 2.700e-28
Identity = 63/130 (48.46%), Postives = 85/130 (65.38%), Query Frame = 0 
Query:  272 EHPTSVNPACKRTLQIEYWDRTRECKERKWDHMDYIDATYASREEWILQSVLHEEDIVLEDNKFPYNTPKGIRHMTLWARRELSLEDVEAFMSGWMEKEGREGGREVRRWNLDENASRSIQIYHVHVYVQ 402
            EH  +  P   RTL++EYW RT EC ERKW HM+ +D  + SREE IL + L  E++VLE N FPY+TP GI H TLW+R E+   ++E F+  W+    R+    V  WN D+N SRSI I+HVH+Y++
Sbjct:   44 EHNATSGPT--RTLRLEYWGRTDECLERKWAHMEMVDEFFESREEVILATTLSNEEVVLEPNMFPYDTPNGIEHWTLWSRHEMVDTEIEKFVCNWL----RKYAPRVESWNYDDNLSRSINIFHVHIYLK 167
[Close]
BLAST of NO27G01010 vs. NCBI_GenBank
Match: KUF87945.1 (hypothetical protein AM587_10015736 [Phytophthora nicotianae])

HSP 1 Score: 136.3 bits (342), Expect = 2.700e-28
Identity = 63/130 (48.46%), Postives = 85/130 (65.38%), Query Frame = 0 
Query:  272 EHPTSVNPACKRTLQIEYWDRTRECKERKWDHMDYIDATYASREEWILQSVLHEEDIVLEDNKFPYNTPKGIRHMTLWARRELSLEDVEAFMSGWMEKEGREGGREVRRWNLDENASRSIQIYHVHVYVQ 402
            EH  +  P   RTL++EYW RT EC ERKW HM+ +D  + SREE IL + L  E++VLE N FPY+TP GI H TLW+R E+   ++E F+  W+    R+    V  WN D+N SRSI I+HVH+Y++
Sbjct:   44 EHNATSGPT--RTLRLEYWGRTDECLERKWAHMEMVDEFFESREEVILATTLSNEEVVLEPNMFPYDTPNGIEHWTLWSRHEMVDTEIEKFVCNWL----RKYAPRVESWNYDDNLSRSINIFHVHIYLK 167
[Close]
BLAST of NO27G01010 vs. NCBI_GenBank
Match: ETK78047.1 (hypothetical protein L915_15841 [Phytophthora parasitica] >ETL31477.1 hypothetical protein L916_15740 [Phytophthora parasitica] >ETL84730.1 hypothetical protein L917_15543 [Phytophthora parasitica] >ETP07730.1 hypothetical protein F441_16117 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 134.4 bits (337), Expect = 1.000e-27
Identity = 60/119 (50.42%), Postives = 81/119 (68.07%), Query Frame = 0 
Query:  283 RTLQIEYWDRTRECKERKWDHMDYIDATYASREEWILQSVLHEEDIVLEDNKFPYNTPKGIRHMTLWARRELSLEDVEAFMSGWMEKEGREGGREVRRWNLDENASRSIQIYHVHVYVQ 402
            RTL++EYW RT EC ERKW HM+ +D  + SREE IL + L  E++VLE N FPY+TP GI H TLW+R E+   ++E F+  W+    R+    V  WN D+N SRSI I+HVH+Y++
Sbjct:   53 RTLRLEYWGRTDECLERKWAHMEMVDEFFESREEVILATTLSNEEVVLEPNMFPYDTPNGIEHWTLWSRHEMVDTEIEKFVCNWL----RKYAPRVESWNYDDNLSRSINIFHVHIYLK 167
[Close]
BLAST of NO27G01010 vs. NCBI_GenBank
Match: XP_024577169.1 (hypothetical protein PHALS_10983 [Plasmopara halstedii] >CEG40800.1 hypothetical protein PHALS_10983 [Plasmopara halstedii])

HSP 1 Score: 133.3 bits (334), Expect = 2.300e-27
Identity = 61/118 (51.69%), Postives = 81/118 (68.64%), Query Frame = 0 
Query:  283 RTLQIEYWDRTRECKERKWDHMDYIDATYASREEWILQSVLHEEDIVLEDNKFPYNTPKGIRHMTLWARRELSLEDVEAFMSGWMEKEGREGGREVRRWNLDENASRSIQIYHVHVYV 401
            RTL++EYW R+ EC +RKW HM+ ID ++ SREE IL + L  E+ VLE N FPY+TP GI H TLW+R E+   ++E F+  W+    R+   +V  WN DEN SRSI I+HVHVY+
Sbjct:   54 RTLRLEYWGRSHECLQRKWAHMEAIDKSFDSREELILATTLSNEESVLERNMFPYDTPSGIEHWTLWSRHEMKEIEIEQFVWNWL----RKNALQVDSWNYDENMSRSIDIFHVHVYL 167
[Close]
BLAST of NO27G01010 vs. NCBI_GenBank
Match: XP_009841731.1 (hypothetical protein H257_15344 [Aphanomyces astaci] >ETV68777.1 hypothetical protein H257_15344 [Aphanomyces astaci])

HSP 1 Score: 129.4 bits (324), Expect = 3.200e-26
Identity = 60/121 (49.59%), Postives = 81/121 (66.94%), Query Frame = 0 
Query:  282 KRTLQIEYWDRTRECKERKWDHMDYIDATY-ASREEWILQSVLHEEDIVLEDNKFPYNTPKGIRHMTLWARRELSLEDVEAFMSGWMEKEGREGGREVRRWNLDENASRSIQIYHVHVYVQ 402
            +RTL +EYW RT ECKERKWDH+D +DA    SREE I  + L      +E N FPY+TP+GI H TLW+R E++ +DV+A++  W++         V+ WN D+N  RSI I+HVHVY+Q
Sbjct:  152 RRTLYLEYWSRTDECKERKWDHLDELDAKLDVSREEHIFGTTLLGRTSYMEPNMFPYDTPEGIEHWTLWSRLEMNHDDVKAYVESWID----TNAPHVQAWNYDDNPERSINIFHVHVYLQ 268
[Close]
BLAST of NO27G01010 vs. NCBI_GenBank
Match: XP_009841732.1 (hypothetical protein, variant [Aphanomyces astaci] >ETV68778.1 hypothetical protein, variant [Aphanomyces astaci])

HSP 1 Score: 129.4 bits (324), Expect = 3.200e-26
Identity = 60/121 (49.59%), Postives = 81/121 (66.94%), Query Frame = 0 
Query:  282 KRTLQIEYWDRTRECKERKWDHMDYIDATY-ASREEWILQSVLHEEDIVLEDNKFPYNTPKGIRHMTLWARRELSLEDVEAFMSGWMEKEGREGGREVRRWNLDENASRSIQIYHVHVYVQ 402
            +RTL +EYW RT ECKERKWDH+D +DA    SREE I  + L      +E N FPY+TP+GI H TLW+R E++ +DV+A++  W++         V+ WN D+N  RSI I+HVHVY+Q
Sbjct:  114 RRTLYLEYWSRTDECKERKWDHLDELDAKLDVSREEHIFGTTLLGRTSYMEPNMFPYDTPEGIEHWTLWSRLEMNHDDVKAYVESWID----TNAPHVQAWNYDDNPERSINIFHVHVYLQ 230
[Close]
BLAST of NO27G01010 vs. NCBI_GenBank
Match: XP_008879536.1 (hypothetical protein H310_13697 [Aphanomyces invadans] >ETV91899.1 hypothetical protein H310_13697 [Aphanomyces invadans])

HSP 1 Score: 129.4 bits (324), Expect = 3.200e-26
Identity = 59/121 (48.76%), Postives = 80/121 (66.12%), Query Frame = 0 
Query:  282 KRTLQIEYWDRTRECKERKWDHMDYIDATY-ASREEWILQSVLHEEDIVLEDNKFPYNTPKGIRHMTLWARRELSLEDVEAFMSGWMEKEGREGGREVRRWNLDENASRSIQIYHVHVYVQ 402
            +RTL +EYW RT ECKERKWDH+D +DA    SREE I ++ L      +E N FPY+TPKGI H TLW+R E++  DV+ ++  W+++        +  WN D+N  RSI I+HVHVY+Q
Sbjct:  158 RRTLYLEYWTRTDECKERKWDHLDELDAQLDVSREEHIYRTTLLGRTSYMEPNMFPYDTPKGIEHWTLWSRLEMNHNDVQEYVEAWIDR----NAPHIEAWNYDDNPERSINIFHVHVYLQ 274
The following BLAST results are available for this feature:
BLAST of NO27G01010 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM21014.13.600e-6576.62hypothetical protein Naga_100081g23 [Nannochlorops... [more]
EWM21015.13.600e-6576.62hypothetical protein Naga_100081g23 [Nannochlorops... [more]
ETO66603.12.000e-2848.46hypothetical protein F444_16288 [Phytophthora para... [more]
XP_008911408.12.700e-2848.46hypothetical protein PPTG_16325 [Phytophthora para... [more]
KUF87945.12.700e-2848.46hypothetical protein AM587_10015736 [Phytophthora ... [more]
ETK78047.11.000e-2750.42hypothetical protein L915_15841 [Phytophthora para... [more]
XP_024577169.12.300e-2751.69hypothetical protein PHALS_10983 [Plasmopara halst... [more]
XP_009841731.13.200e-2649.59hypothetical protein H257_15344 [Aphanomyces astac... [more]
XP_009841732.13.200e-2649.59hypothetical protein, variant [Aphanomyces astaci]... [more]
XP_008879536.13.200e-2648.76hypothetical protein H310_13697 [Aphanomyces invad... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL057nonsL057Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR044ncniR044Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR093ngnoR093Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO27G01010.1NO27G01010.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|215198gene_8688Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO27G01010.1NO27G01010.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO27G01010 ID=NO27G01010|Name=NO27G01010|organism=Nannochloropsis oceanica|type=gene|length=2573bp
ATGCTCTCCACAGCACGCACTTGCCAGTCCACCACAACGCACAATCATGC
CGTTACTGCTGCTGCTGTTCGGACAACATCAACTACCCCCTACATGTTGT
CCTTGAGGCGAGGgtaggattctttgttgttgtcgtgtgtgtttgtgaaa
gaagttgttaaatgtgctgacggcagcaaaaaaggagaaatttcactgcc
cttaccctaacccctttcacattccaacccacacctttgacgtatagTTG
CTGCAGgtgcaaaagctgacacgtttacttgccgagcggcagtccctgga
ttctccggcgcagagctcgatatttcccctgcgagccgctctcgtccttg
tctacacaaaataaagcctctctcttctctctgccctcccccatgccccc
tggaacgagCGCGACTACGATAACTGCCGATACTATCGCCAGCAGCAGCA
GTAGCAGTATGAGCACCATCAGTGAGAATGAGGCCTTTGCTCACCACGAA
CCCCCCTCCGTACCGTCCAGGCCTTCCCGTCTCCGTCGCGAGGACAGCAG
CTGCTGCAGCAGCAACAGCAACAATAGCATCAGCAGTATCAAAAGCAACA
CTAAACATAAGGCTCGGGAGGTGAGTGGTTTGCCGCCAATCACAGCTGCC
TCCTCCCCTTCATCCCTCCCGCCCTCCACCTCCACCTCCACCTCCAGCAA
TTCTCCTTATCGGAAAGGCCGCCTTATAGATCGACTCGATACTGTCTTGC
CAGAGGTCGAAGGGGGAGTAGAAGGAGTAGTCAAAGCAGTCAGCTCTACG
CCTGTTGAGCCGCCAGCTGTTTCGGTGTCGACTCAGAATCGCCGGCACAA
TCATTCTTACTCCTACCACCATCGATCTGCCTCGCCCTCCCCTACGCGCG
ATGAGGAGGACAGGCGACAAGACAAAGAGAGATACCGCTTGGGCTCAATG
CGGACGTCCAAAAAGAAGGAGGAGACGGAGGGAGCCAGCGGCGCCGATGA
GCAGCAACAGGAAGAGGAGGGGAAGCAGGGACATGGAGATGGAGGGGAGG
ATGAAGGGGGCTCGCAAGTGGACGACAGATTCCGAGCGGAACAGAATTGG
GAGCATCCGACAAGCGTGAATCCTGCATGTAAACGGACGCTACAGATCGA
GTACTGGGATCGAACGCGGGAGTGCAAGGAGAGAAAGTGGGATCATATGg
tatgtgggctctaggcacgtggtgggtggtatgttgtttagttagtagtg
gtatgtgggctctaggccacgtggtgggtggtttgttgtttagttccatg
ggacccttgattcattattttaaaactgtggtttatttgtttactgattc
aactatgtatgtatgtgtgcgtgcgtgtatatctgtgtgtttccttgttg
aattgagcttgttttccgtcaccacgttaaggcccagctcagcttttcgt
gtcccgcccctctcatgcctcgccccctccctttctctcaccctttctat
ctcctccctcctgaccagGACTACATCGATGCCACCTACGCCTCGCGGGA
AGAATGGATCCTGCAGTCTGTCCTCCATGAAGAGGACATTGTTCTGGAAG
ACAACAAATTTCCgtaagtatcctttgtccctccccccctccctccttcc
ctccctcacaatcaatcctgtacgagagagaaaatgtcacaaattcccat
gagcatggcgcatccgccctcctttccttctttcctcccctctctccctc
cttcattccgttatgccttctctagactcagatctgtcacccctccctcc
ctccttcccctccctccagGTACAACACCCCCAAAGGGATCAGGCATATG
ACGCTCTGGGCTCGGCGGGAGTTGTCGTTGGAAGACGTGGAGGCCTTCAT
GTCGGGCTGGATGGAGAAGGAAGGAAGGGAGGGAGGGAGGGAGGTCCGCC
GGTGGAACCTTGACGAGAATGCCTCGAGGTCCATCCAAATCTACCACGTC
CATGTTTACGTACAGgtaggcgagggagggcgggagggagggctggagga
aggggggaagatgtgtgtttgtacacaggtgtggttattttctctcatgt
caagaaacccttattcattgatcgtccccttcttatatccctcccctcct
ccctccctccttccctccctccctccacccccttcactcacacagGAGGT
CCCCGACGAGGACGTCGGTCTCAACCCTTCCACCGAGGAGGAGGCAGCAG
CGGCAGTAGCAGCAGGAGCCGCAGGGAATGAAGAAGCTCCTTCCGCCGAT
GGCCACGAGGACGAGCATGACAGCAGCAGTAGGAGCAGCAGAAGCAGGGG
CAAGAAGAGGGATGGCGATGACTTGCGGGACGAAGAGGAGACAGATGAGA
CAGAGGAAGCGAAGAAAGAGCGCAGGAAAAAGAGGAAGGAGATGAAGAAA
AGGGAGAAAAAACAGCGTTTGTCACCACCCCCCTCCTCCCTCCCTTCCTG
CTCCCTTGTTGACAGCCCAGCGACCGTTCAAGCGCACGAGCAAAAGCTTC
AGGAAGAGCAAGAGATGGGATGA
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protein sequence of NO27G01010.1

>NO27G01010.1-protein ID=NO27G01010.1-protein|Name=NO27G01010.1|organism=Nannochloropsis oceanica|type=polypeptide|length=527bp
MLSTARTCQSTTTHNHAVTAAAVRTTSTTPYMLSLRRGCCSATTITADTI
ASSSSSSMSTISENEAFAHHEPPSVPSRPSRLRREDSSCCSSNSNNSISS
IKSNTKHKAREVSGLPPITAASSPSSLPPSTSTSTSSNSPYRKGRLIDRL
DTVLPEVEGGVEGVVKAVSSTPVEPPAVSVSTQNRRHNHSYSYHHRSASP
SPTRDEEDRRQDKERYRLGSMRTSKKKEETEGASGADEQQQEEEGKQGHG
DGGEDEGGSQVDDRFRAEQNWEHPTSVNPACKRTLQIEYWDRTRECKERK
WDHMDYIDATYASREEWILQSVLHEEDIVLEDNKFPYNTPKGIRHMTLWA
RRELSLEDVEAFMSGWMEKEGREGGREVRRWNLDENASRSIQIYHVHVYV
QEVPDEDVGLNPSTEEEAAAAVAAGAAGNEEAPSADGHEDEHDSSSRSSR
SRGKKRDGDDLRDEEETDETEEAKKERRKKRKEMKKREKKQRLSPPPSSL
PSCSLVDSPATVQAHEQKLQEEQEMG*
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Synonyms
Publications