NO27G00940, NO27G00940 (gene) Nannochloropsis oceanica

Overview
NameNO27G00940
Unique NameNO27G00940
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1999
Alignment locationchr27:317863..319861 +

Link to JBrowse

Properties
Property NameValue
DescriptionConserved c2h2 zinc finger protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr27genomechr27:317863..319861 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000727T_SNARE_dom
Homology
BLAST of NO27G00940 vs. NCBI_GenBank
Match: EWM21002.1 (conserved c2h2 zinc finger protein [Nannochloropsis gaditana])

HSP 1 Score: 489.2 bits (1258), Expect = 1.400e-134
Identity = 260/421 (61.76%), Postives = 312/421 (74.11%), Query Frame = 0
Query:   34 NGFLRVAQESIAMGRETLTAVAGQQESLDRAEAVVDSNRYLIDKSARSLRGMSWWGSVKNFFSEEPAAPRPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRNSMAAQWQDQPQ-GYTQSSSDERQELYSLRHEGNATDARATRSQAGSAPPATLARVAHIQDTYLEKLSKSVDEQRAIGGTLHEALSEQAAQINRLGESSEGLHDRTRAVVRKAARVSRSQGGWVGERPKLHKFIAFRELRTGLFLSVVGEELKLQEPHMTKACQFAAYTCQTALTGLQSVLSRKWLGQHWITGALGVRGTGLGKNEEWEVDWGKPGGAFLLSCSANWGNGGYLMLVPGKEGGRGGGEGRGQDVRLGGYGMEERGKAALFELMDCETYRTTEVVTEIMHKKTPAELAAEEELRNRQGV--LGGWRT 452
            + +LRVA ES+A+GRETLTAVAGQQE+LDR+EAVVDSNRY+I+KSAR+LRGM+WWGS++N+FSEEP APRP                                 + +S    W+DQP+ G +    DERQEL++ +  G   DAR  R+      P +L+ VA +QD YLE L KS+DEQR IG TLHEALSEQ  Q++RL   SEGL D TRAV+RKAAR SR++GGW  ERP+L+KF+AFRE+R+GLFLSV GEEL+LQEP+M+KACQFAAYT Q ALTGLQSVLSRKWLGQHWI+GALGVRGTGLGKNEEWEVDW +P GAF L CSANWG+GGYLM  P K+     G+    D+RLGGY  EERGKAALFE++DCE+YRTT+VVTEI+ KKTPAELAAEEE + R  +  LG  RT
Sbjct:   59 DAYLRVAHESVAIGRETLTAVAGQQEALDRSEAVVDSNRYVIEKSARTLRGMTWWGSLRNYFSEEPEAPRP--------RTSTWLADRRAGLRGPGQQAGERTEAHSSDPPLWRDQPRDGCSNPVKDERQELFARKVNGETADARLKRAHVAGQGPQSLSEVARMQDEYLESLGKSLDEQRGIGRTLHEALSEQRVQVDRLEAGSEGLEDATRAVIRKAARASRARGGWGAERPRLYKFVAFREVRSGLFLSVAGEELRLQEPNMSKACQFAAYTSQ-ALTGLQSVLSRKWLGQHWISGALGVRGTGLGKNEEWEVDWRRPEGAFFLLCSANWGSGGYLMAFPKKD--ERLGQTLAYDLRLGGYNGEERGKAALFEIVDCESYRTTDVVTEIIQKKTPAELAAEEERKRRGSLISLGALRT 468          
BLAST of NO27G00940 vs. NCBI_GenBank
Match: GAX25973.1 (hypothetical protein FisN_4Hh543 [Fistulifera solaris])

HSP 1 Score: 124.8 bits (312), Expect = 7.000e-25
Identity = 117/419 (27.92%), Postives = 181/419 (43.20%), Query Frame = 0
Query:   38 RVAQESIAMGRETLTAVAGQQESLDRAEAVVDSNRYLIDKSARSLRGMSWWGSVKNFFSEE-----------PAAPRPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRNSMAAQWQDQ-PQGYTQSSSDERQ----ELY--------SLRHEGNATDARATRSQA----------------GSAPPATLARVAHIQDTYLEKLSKSVDEQRAIGGTLHEALSEQAAQINRLGESSEGLHDRTRAVVRKAARVSRSQGGWVGERPKLHKFIAFRELRTGLFLSVVGEELKLQEPHMTKACQFAAYTCQTALTGLQSVLSRKWLGQHWITGALGVRGTGLGKNEEWEV--DWGKPGGAFLLSCSANWGNGGYLMLVPGKEGGRGGGEGRGQDVRLGGYGMEERGKAALFELMDCET 415
            R A E++ +GR TL  V  Q E LDRAE++ D  +Y +DK+ R LRGM+W G + N F+++           P AP                                    R ++    Q       TQ    E+     E Y        ++ HE   +  ++ R Q                  S   AT A +  +Q+ +L+ +SKS+ E   I  TL  A+ +QA  I+ L E ++ + +++R V R+A R+ +++  W   +P     ++ R L +G +LSV    L LQ         F+ +  Q  + GL++  S +WLGQ  + G +       G+ EEWE   DWGK   + LL  S  WG GGYL++                 VRLGG G+EER  A L+ + + +T
Sbjct:   33 RAAVETLHIGRATLEQVHQQGEQLDRAESIADETQYRLDKAGRILRGMTWSGWLANKFTKDIGPPPAVTRSTPIAPPLVYENVPDSCRAAAQAIQNYHANVKVLEACETDEQRETLLLICQSMYSSAMTQLDELEKNRASVEAYVTEFRSHLTILHEKEQSLNQSMRQQKISFEKNRAELLKGHSNSSTSSATDAHL-QLQENHLDMISKSLGEIGMISHTLASAIGQQAQTIDSLDEKADHITEKSRMVTRRADRLIQNK-SWTPVKPTFACHVSIRHLESGRYLSVHEGNLVLQTTFHESTGVFSLWKRQGEIFGLKNKESGRWLGQSML-GGISCSAYDFGRREEWEADSDWGK---SRLLCTSVGWGAGGYLLV-----------NTHNLSVRLGGCGVEERKTADLWCITNLDT 434          
BLAST of NO27G00940 vs. NCBI_GenBank
Match: GAX24408.1 (hypothetical protein FisN_4Lh543 [Fistulifera solaris])

HSP 1 Score: 121.7 bits (304), Expect = 5.900e-24
Identity = 110/417 (26.38%), Postives = 184/417 (44.12%), Query Frame = 0
Query:   40 AQESIAMGRETLTAVAGQQESLDRAEAVVDSNRYLIDKSARSLRGMSWWGSVKNFFSEE-----------PAAPRPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRNSM---------AAQWQ----DQPQGYTQSSSDERQELYSLRHEGNATDARATRSQA----------------GSAPPATLARVAHIQDTYLEKLSKSVDEQRAIGGTLHEALSEQAAQINRLGESSEGLHDRTRAVVRKAARVSRSQGGWVGERPKLHKFIAFRELRTGLFLSVVGEELKLQEPHMTKACQFAAYTCQTALTGLQSVLSRKWLGQHWITGALGVRGTGLGKNEEWEV--DWGKPGGAFLLSCSANWGNGGYLMLVPGKEGGRGGGEGRGQDVRLGGYGMEERGKAALFELMDCET 415
            A E++ +GR TL  V  Q+E LDRAE++ D  +Y++DK+ R LRGM+W G + N F+++           P +P                                    R ++         AA  Q    ++     ++   E +   ++ HE   +  ++   Q                 GS+  AT A +  +Q+ +L+ +SKS+ E   I  TL  A+ +QA  I+ L E ++ + +++R V R+A R+ +++  W   +P     ++ R + +G +LSV    L LQ         F+ +  Q  + GL++  S +WLGQ  + G +       G+ EEWE   DW     + LL  S  WG GGYL++                 +RLGG G+EER KA L+ + + +T
Sbjct:   35 AVETLHIGRATLEQVHQQREQLDRAESIADETQYILDKAGRILRGMTWSGWLANKFTKDIGPPPAVTRSTPISPPLVYENVPETCRAAAQAIQNYHANVKVLETCETDEQRETLLLICRSMYSAAMTQLDELEKSHASVEAYLTEFRSHLTILHEKEQSLNQSNEQQKISFDRNRAELLKRQGNGSSSSATDAHL-QLQENHLDMISKSLSEIGMISHTLASAIGQQAQTIDSLDEKADNITEKSRLVTRRADRLIQNK-SWTPVKPTFACHVSIRHIDSGCYLSVHEGNLVLQNTFHETTGVFSLWKRQGEIFGLKNKESGRWLGQSML-GGISCSAYDFGRREEWEADSDWST---SRLLCTSVGWGAGGYLLV-----------NTYNFSIRLGGCGVEERKKADLWCITNLDT 434          
BLAST of NO27G00940 vs. NCBI_GenBank
Match: XP_009038386.1 (hypothetical protein AURANDRAFT_71858 [Aureococcus anophagefferens] >EGB07162.1 hypothetical protein AURANDRAFT_71858 [Aureococcus anophagefferens])

HSP 1 Score: 120.9 bits (302), Expect = 1.000e-23
Identity = 101/344 (29.36%), Postives = 158/344 (45.93%), Query Frame = 0
Query:   42 ESIAMGRETLTAVAGQQESLDRAEAVVDSNRYLIDKSARSLRGMSWWGSVKNFFS--EEPAAPRPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRNSMAAQWQDQPQGYTQSSSDERQELYSLRHEGNATDARATRSQAGSAPPATLARVAHIQDTYLEKLSKSVDEQRAIGGTLHEALSEQAAQINRLGESSEGLHDRTRAVVRKAARVSRSQGGWVGERPKLHKFIAFRELRTGLFLSVVGEELKLQE--PHMTKACQFAAYTCQTALTGLQSVLSRKWLGQHWITGALGVRGTGLGKNEEWEVDWGKPG--GAFLLSCSANWGNGGYLMLVPGKEG 380
            E+   GR  LT +  Q E+L RAE V DSN+Y+IDKS R +  M+W G ++N F+   +PAAP P                                  R++ AA W+        + + ER  L++             R  A  AP +        QD Y+  LS+ +++ R +G  L + L++   ++ RL +  + L   TR V R A R++ +     G  PKL   +A REL T  +L   G+++ L E    +   C+FA Y  +  L GL+S +S K+L   + +GA+    +  G   EW++D    G  G+ L+   ANWG G +  + P K+G
Sbjct:   58 EAYEHGRSALTRLGEQGEALHRAEVVADSNQYVIDKSRRVVANMTWSGWLRNKFTALPKPAAPPP------------------------APAGAAPGDRRDAAAAAWRGH-----GADAAERSALFA-----------GARGAAAPAPRSKGEAALAEQDAYVNALSEGLEDLRGVGEALGDELADHDDRVPRLQDKMDRLWSTTRQVTRAAGRLTHAS---AGSTPKLLGHVALRELATKRYLRARGQDVGLSEEVDVLRATCRFALYEKRAHLLGLRSPVSGKYLAITF-SGAIECASSRFGGWAEWDLDLSPRGVKGSPLVCLGANWGGGSFCRVHP-KDG 356          
BLAST of NO27G00940 vs. NCBI_GenBank
Match: XP_002176986.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC51449.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 110.2 bits (274), Expect = 1.800e-20
Identity = 74/260 (28.46%), Postives = 132/260 (50.77%), Query Frame = 0
Query:  154 TQSSSDERQELYSLRHEGNATDARATRSQAGSAPPATLARVAHIQDTYLEKLSKSVDEQRAIGGTLHEALSEQAAQINRLGESSEGLHDRTRAVVRKAARVSRSQGGWVGERPKLHKFIAFRELRTGLFLSVVGEELKLQEPHMTKACQFAAYTCQTALTGLQSVLSRKWLGQHWITGALGVRGTGLGKNEEWEV--DWGKPGGAFLLSCSANWGNGGYLMLVPGKEGGRGGGEGRGQDVRLGGYGMEERGKAALFELMD 412
            T++S + ++EL S  H+    +  A+R Q     P+    V   QD +L+ +S+S+ E  +I   L ++  +Q   I++L   S+ + ++++ V R+A R+ + +  W   +P     +  R + +G +L+V   +L L      + C FA +  Q  + GL++  + KW+GQ+ + G+L    +  G+ EEWE   DW     + +L  SA WG GGYL + P   G           + +GGYG EER KA  + +++
Sbjct:  121 TENSGNHKEELLS-NHKTTVMNLTASRPQ-----PSPCDIVRQRQDQHLDTISQSLGELGSIAQNLKQSFQQQNETIDKLDTKSDNILEKSKMVTRRADRIIQKK-SWTPVKPTFACMVTIRHVSSGKYLAVADTDLNLVPKRHPETCVFALWKRQGEIFGLKNKFNNKWVGQN-LFGSLACSASSFGRREEWEAEEDW---TNSRILCASAGWGAGGYLNVRPTDHG-----------IVIGGYGFEERKKADAWSIVE 358          
BLAST of NO27G00940 vs. NCBI_GenBank
Match: CBN77969.1 (Conserved C2H2 zinc finger protein [Ectocarpus siliculosus])

HSP 1 Score: 84.7 bits (208), Expect = 8.000e-13
Identity = 116/448 (25.89%), Postives = 172/448 (38.39%), Query Frame = 0
Query:   37 LRVAQESIAMGRETLTAVAGQQESLDRAEAVVDSNRYLIDKSARSLRGMSWWGSVKNFFSEEPAAPRPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRNSMAAQWQDQPQGYTQS-SSDERQELYS-----LRHEGNA-TDARATRSQAGSAPPATLARVAHIQDTYLEKLSKSVDEQRAIGGTLHEALSEQAAQINRLGESSEGLHD--------RTRAVVRKAARVSRSQGGWVGERPKLHKFIAFRELRTGLFLSVVGEELKLQEPHMTKACQFAAYTCQTALTGLQSVLSRKWLGQHWITGALGVRGTGLGKNEEWEVDWGKPGGAFLLSCSANWGNGGYLMLVP----------------GKEGGRGGGEGRGQ-----DVRLGGYGMEERGKAALFELMDCETYRTTEVVTEIMHKKTPAELAAEEELRNRQGVLGG 449
            LR A ES+ +GRE L  +  Q+E L+R+E V+DS RY I++SAR LRGM++WG ++N FS++P  P+                                  +         D P    +     + + L+      + H G+A T A      AG  P     R A  +     K     +  RA GG       E        GE   G+ D           A          + GG  G  P  H        R G   +  G E +L    + +       +    + GL+S ++RKWLGQ ++ G L V G+  GKN EW+ D  +     ++ CSANWG GGYL + P                   GG     GR       ++ L    +  R +AA+F L++C+ Y             TP      + +RN +  +GG
Sbjct:   96 LRSAYESVEVGREALERLDDQKERLERSEMVLDSTRYAIERSARILRGMTFWGKIRNAFSDDPQVPQ-------------------------QPAGSTRAGTATGDGGNGNDDPDTPAEGFICPDCRGLFPTSDVLVAHYGSAHTIAEGGDGVAGRLPG---FRRAGGEGAGHPKPQHWGEPGRA-GGHAGPGGGEVVG-----GERPHGVRDAQGRASGAELEAQEPDLCHEPGAAGGVDGPVPCGH--------RRGGGAAGQGAEERLPLRGVGETGTLGGSSSTHGIIGLKSGVTRKWLGQTFL-GYLRVSGSSFGKNHEWQADLRRK-ETTMVCCSANWGAGGYLSVRPSGTSIRNGDTTLEGPTAASGGNTNNCGRDSAAEMAELSLVDATLANRPRAAVFRLVNCDGY-------------TPQPFVGGKLMRNPEPPVGG 486          
BLAST of NO27G00940 vs. NCBI_GenBank
Match: XP_008609925.1 (hypothetical protein SDRG_05956 [Saprolegnia diclina VS20] >EQC36504.1 hypothetical protein SDRG_05956 [Saprolegnia diclina VS20])

HSP 1 Score: 83.6 bits (205), Expect = 1.800e-12
Identity = 84/345 (24.35%), Postives = 149/345 (43.19%), Query Frame = 0
Query:   33 YNGFLRVAQESIAMGRETLTAVAGQQESLDRAEAVVDSNRYLIDKSARSLRGMSWWGSVKNFFSEEPAAPRPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRNSMAAQWQDQPQGYTQSSSDERQELYSLRHEGNATDARATRSQAGSAPPATLARVAHIQDTYLEKLSKSVDEQRAIGGTLHEALSEQAAQINRLGESSEGLHDRTRAVVRKAARVSRSQGGWVGERPKLHKFIAFRELRTGLFLSVVGEELKLQEPHMTKACQFAAYTC--QTALTGLQSVLSRKWLGQHWITGALGVRGTGLGKNEEWEVDWGKPGGAFLLSCSANWGNGGYLMLVP 376
            Y   LR+  E++A+ RE  +A+  Q E LD+ E  +D  +++++++   +RGMSW G + N F++EP+   P                                 + ++        P       SD++ +++       A+D   T+ QA                 YL  L   + E +     +   L  Q AQI+R+   SE   D  R V  KA +++ S    +   P+     AF+EL T  F++ V  +  + +   +  C F AYT    T + G +S  S  +LG + + GA+ ++G GL   E++ +D  +P    L S ++ +G GG++ + P
Sbjct:   13 YRASLRLNAETVAISREVASALVMQSEQLDQTETALDVTQHVVEQANYVVRGMSWSGWLANKFAKEPSLAHPPASAPSKEIAMGFICPECRVAQVSQHALMEHYEAAHTSLPATASLP----SKRSDDQDDVF-------ASDNGLTKEQA----------------AYLAALGPQLLELKHASKGISNHLDMQLAQIDRIEAKSEKTKDDMRLVTAKATKLTSS---LLTISPQFR--CAFQELTTQKFVANVNGDPLVCKDAASADCLFRAYTLADSTDMWGFKSESSGLFLGLNAL-GAMRIQGAGLKSYEQFAIDVSRP-ETTLFSFASCFGLGGWVSMRP 323          
BLAST of NO27G00940 vs. NCBI_GenBank
Match: XP_008871837.1 (hypothetical protein H310_08019 [Aphanomyces invadans] >ETV99281.1 hypothetical protein H310_08019 [Aphanomyces invadans])

HSP 1 Score: 82.0 bits (201), Expect = 5.200e-12
Identity = 82/341 (24.05%), Postives = 146/341 (42.82%), Query Frame = 0
Query:   37 LRVAQESIAMGRETLTAVAGQQESLDRAEAVVDSNRYLIDKSARSLRGMSWWGSVKNFFSEEPAAPRPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRNSMAAQWQDQPQGYTQSSSDERQELYSLRH----EGNATDARATRSQAGSAPPATLARVAHIQDTYLEKLSKSVDEQRAIGGTLHEALSEQAAQINRLGESSEGLHDRTRAVVRKAARVSRSQGGWVGERPKLHKFIAFRELRTGLFLSVVGEELKLQEPHMTKACQFAAYTC--QTALTGLQSVLSRKWLGQHWITGALGVRGTGLGKNEEWEVDWGKPGGAFLLSCSANWGNGGYL 372
            LR   E++ + RET  A++ Q E+LDRAE  +D     + ++   +RGM+W G + N F++EP+  RP                                 S++ +   +         SS  + Q+  S+R       + T   +T  ++G+     L      Q  +L+ L+  + E +     +  AL    AQ++R+   SE   D  R V  KA +++ S               A +E ++  FL+VV  +        +++C F A+T      + G Q   S +WLG + + G++  +G  L   E++ +D G+     L S ++ +GNGG+L
Sbjct:   27 LRTTAETLNIARETAVALSQQSEALDRAERNLDLTETTVKQANHVVRGMTWSGWLYNKFTKEPSLSRP-------------LPSTDISMGFICPECRVAQRSQHGLLEHYASMHGDGPSSSPQDSQQRQSIRELFASSSSQTHDNSTSQRSGNVDDEGL---NPDQRAFLDALAPQLLEMKHASRAIGNALDHHNAQLDRIDAKSEKTKDDLRLVTAKAVKLTSS-----SMTIDAQFRCALQEQQSRRFLTVVNGDPTFSMDTASESCIFRAFTLTGNAEVWGFQHEQSMRWLGLN-MFGSVKAQGEALRSYEQFALDTGRE-WTTLYSFASTFGNGGWL 344          
BLAST of NO27G00940 vs. NCBI_GenBank
Match: OEU22604.1 (hypothetical protein FRACYDRAFT_232763 [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 78.6 bits (192), Expect = 5.700e-11
Identity = 104/453 (22.96%), Postives = 163/453 (35.98%), Query Frame = 0
Query:   33 YNGFLRVAQESIAMGRETLTAVAGQQESLDRAEAVVDSNRYLIDKSARSLRGMSWWGSVKNFFSEEPAAPRPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRNSMAAQWQ-------------------------------------DQPQGYTQSSSDE----------------------RQELYSLRH--------EGNATDARAT----------------RSQAGSAPPATLAR--VAHIQDTYLEKLSKSVDEQRAIGGTLHEALSEQAAQINRLGESSEGLHDRTRAVVRKAARVSRSQGGWVGERPKLHKFIAFRELRTGLFLSVV---GEELKLQEPHMTKACQFAAYTCQTALTGLQSVLSRKWLGQHWITGALGVRGTGLGKNEEWEV--DWGKPGGAFLLSCSANWGNGGYLMLVPGKEGGRGGGEGRGQDVRLGG 396
            Y    + A E++ +GRETL A  GQ E L  AE + D   Y +DK+ R LRGM+W G + N  S +   P                                   +  +  A  Q                                      Q +    S +D                       RQ    L+H         G  TDA A+                 +  GS+   T +   V   QD +L+ +++ + E  ++ G L+ +L +Q+  I+ L   ++ LH +T+ V R+  R  + +  W   R +  ++   R   +G +LSV         +      + C F  +  +  + GLQ+  +R+W GQ  + G L    +   + EEWEV  DW       LL  SA WG+GGYL+L           EG+G    +GG
Sbjct:   32 YQRAQQAAVEAVMVGRETLEATIGQGEQLQNAENMADDTEYTLDKANRMLRGMTWSGFILNKLSRDVDPPEYKDDTINDTKNNKGTLGPPKVYEQVPDLYKAAAQALQNYHANLQVLEDCETNEQKETCRLICDDMHRQVNKKITEASTMIGQQRKDNNDSVNDNACKDTTNDEDLALQLQEDVSALRQRQLVLQHVQRGLMMTSGEKTDASASSINDKVKLFKNVKHNDTTVNGSSDSNTTSNDTVLIQQDQHLDTINQQLQELGSLAGNLNISLQQQSEVIDSLDSKNDTLHFKTKTVNRRTERFIQDK-SWTKPRAEFVRYAWIRHQISGQYLSVAPNNDSTTLVLSNVFNERCIFGIWK-RNRVLGLQNKYNRRWAGQS-LLGKLTCSASTFNRREEWEVDNDW---SDTTLLIVSAGWGSGGYLLL---------DKEGKGTQPLIGG 469          
BLAST of NO27G00940 vs. NCBI_GenBank
Match: XP_012209454.1 (hypothetical protein SPRG_14942 [Saprolegnia parasitica CBS 223.65] >KDO19842.1 hypothetical protein SPRG_14942 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 77.4 bits (189), Expect = 1.300e-10
Identity = 83/345 (24.06%), Postives = 146/345 (42.32%), Query Frame = 0
Query:   33 YNGFLRVAQESIAMGRETLTAVAGQQESLDRAEAVVDSNRYLIDKSARSLRGMSWWGSVKNFFSEEPAAPRPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRNSMAAQWQDQPQGYTQSSSDERQELYSLRHEGNATDARATRSQAGSAPPATLARVAHIQDTYLEKLSKSVDEQRAIGGTLHEALSEQAAQINRLGESSEGLHDRTRAVVRKAARVSRSQGGWVGERPKLHKFIAFRELRTGLFLSVVGEELKLQEPHMTKACQFAAYTC--QTALTGLQSVLSRKWLGQHWITGALGVRGTGLGKNEEWEVDWGKPGGAFLLSCSANWGNGGYLMLVP 376
            Y   LR+  E++A+ R+  +A+  Q E LD+ E  +D  + ++ ++   +RGMSW G + N FS EP    P                                 S ++        P   +  S +++ ++Y       A+D   T+ QA                 YL  L   + E +     +   L  Q AQ++R+   SE   D  R V  KA +++ S    +   P+     AF+EL T  F++ V  +  + +   +  C F A+T    T + G +S  S  +LG + + GA+ ++G GL   E++ +D  +P    L S ++ +G GG++ + P
Sbjct:   16 YRASLRLNAETVAISRDVASALVMQSEQLDQTETALDVTQQVVGQANYVVRGMSWSGWLANKFSREPTVVLPHASAPSKEIAMGFICPECRVAQVSQRALMEHYESAHASPPATAFLP---SNGSGEDQGDVY-------ASDNGLTKEQA----------------AYLAALGPQLLELKHASKGISNHLDMQLAQLDRIEAKSEKTKDDMRLVTAKATKLTSS---LLTISPQFR--CAFQELTTRKFVANVNGDPVVCKDAASADCLFRAFTLADSTDMWGFRSESSGLFLGINAL-GAMRIQGAGLKSYEQFAIDVSRP-ETTLFSFASCFGLGGWVSMRP 327          
The following BLAST results are available for this feature:
BLAST of NO27G00940 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 14
Match NameE-valueIdentityDescription
EWM21002.11.400e-13461.76conserved c2h2 zinc finger protein [Nannochloropsi... [more]
GAX25973.17.000e-2527.92hypothetical protein FisN_4Hh543 [Fistulifera sola... [more]
GAX24408.15.900e-2426.38hypothetical protein FisN_4Lh543 [Fistulifera sola... [more]
XP_009038386.11.000e-2329.36hypothetical protein AURANDRAFT_71858 [Aureococcus... [more]
XP_002176986.11.800e-2028.46predicted protein [Phaeodactylum tricornutum CCAP ... [more]
CBN77969.18.000e-1325.89Conserved C2H2 zinc finger protein [Ectocarpus sil... [more]
XP_008609925.11.800e-1224.35hypothetical protein SDRG_05956 [Saprolegnia dicli... [more]
XP_008871837.15.200e-1224.05hypothetical protein H310_08019 [Aphanomyces invad... [more]
OEU22604.15.700e-1122.96hypothetical protein FRACYDRAFT_232763 [Fragilario... [more]
XP_012209454.11.300e-1024.06hypothetical protein SPRG_14942 [Saprolegnia paras... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL057nonsL057Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR044ncniR044Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR093ngnoR093Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK005102NSK005102Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO27G00940.1NO27G00940.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|656719gene_8682Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100081g19gene9423Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO27G00940.1NO27G00940.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO27G00940 ID=NO27G00940|Name=NO27G00940|organism=Nannochloropsis oceanica|type=gene|length=1999bp
TCCTCCAGCACCATGGCTGGCTGTGTGTATGTGTTTTGTGTTATGGGAGT
AGACGACGAGATAGGTAAGCGCGCAGAATGCACGATTTTGGCGAGGGTCA
AGGCGGCCGGTCCTTGAATGACGGCACGTTTGCAGACCTTTACACCCCCC
GCTACGGGCCGGTGTGGGAGTCTTGGGCCTCGATAAGGAGCTCGTCATGC
TGTATTTTGCTAGAAAAAATGCATTACAAACAAAGTTGAGGCTCAAACGC
ATCATCATCATCGGCGTCTTCCATAGGTCTTCATTTTGAGTCGCAAGTGT
TGCCTTCCTTGGCCTAATTCAAACCCGGCGCATCTATCACCCCGACCAGA
AACACACAGATTCCAAAGCATGGAGTGGGGAGGCGGCGGCGGCGGCGGCA
ATGGGAGCGTGGAAACCAACCAGCAGCAGCAACAGgtaagcactccatcc
cctccctcgtaccccacctccctccttcatctcacccaacccaaatctca
tacaacatcacacgaccgcacaaagcagAGACCCCACCATTTTAAGACTG
AGGAGGAATATAACGGCTTCCTACGAGTTGCGCAAGAGTCCATAGCGATG
GGGCGGGAAACCCTGACGGCAGTAGCGGGGCAGCAAGAGTCCTTAGACCG
GGCCGAAGCCGTTGTGGATTCCAATCGGTACTTGATCGATAAAAGTGCCA
GATCATTGCGAGGTATGTCTTGGTGGGGCTCTGTCAAGAATTTTTTTTCG
GAAGAACCTGCGGCACCGCGCCCTAAGGCGTCGAGCTGGATGACCAAGCA
GCAGCAGCAGCAGCCGCAGCAACAAGAAGAAGCAACAGGAAGAAGTAGTA
TTCCTACTAGCAGCAGCATCAGCAGCAGAAACAGCATGGCGGCACAATGG
CAAGATCAACCACAAGGCTATACCCAGAGCAGCAGTGACGAGCGTCAAGA
GCTTTACTCTCTCCGACATGAGGGGAACGCCACCGATGCCCGAGCCACAC
GCTCTCAAGCAGGATCAGCCCCACCGGCGACCCTGGCCCGAGTCGCGCAT
ATCCAAGACACGTACCTGGAAAAACTGAGCAAGAGCGTCGATGAACAACG
GGCCATTGGAGGGACCTTACACGAAGCCTTGTCCGAGCAAGCGGCGCAAA
TAAATCGATTGGGAGAGAGTAGTGAGGGGCTCCATGATCGGACCCGTGCA
GTGGTCCGCAAGGCCGCTCGTGTATCCCGCTCCCAAGGAGGGTGGGTGGG
GGAGAGACCGAAATTGCATAAGTTCATAGCCTTTCGCGAGTTGCGCACGG
GATTGTTCTTGAGTGTGGTAGGGGAGGAGCTTAAGTTACAGGAGCCACAC
ATGACCAAGGCGTGTCAGTTTGCGGCCTACACGTGCCAGACGGCCTTAAC
GGGCTTACAATCAGTCCTATCTAGGAAATGGCTTGGGCAGCATTGGATCA
CCGGGGCTCTCGGTGTTCGAGGTACGGGGCTAGGAAAGAATGAGGAGTGG
GAGGTGGACTGGGGCAAGCCTGGGGGAGCATTCCTTTTGTCGTGTTCGGC
GAATTGGGGAAATGGAGGGTACTTGATGTTGGTACCTGGGAAGGAGGGAG
GAAGAGGAGGAGGGGAAGGGCGAGGGCAAGATGTGAGGTTGGGGGGGTAT
GGAATGGAAGAGAGAGGAAAGGCAGCCTTATTTGAATTGATGGATTGCGA
GACATACCGGACGACGGAAGTCGTCACGGAGATAATGCACAAGAAGACAC
CGGCCGAGTTGGCGGCGGAAGAGGAGCTGAGGAATAGGCAAGGGGTACTG
GGGGGATGGAGAACTGCAGCTTTGAAAGGGTCGAGAGGATGATCATGTTG
ATATATGTGAAGGGAAAATGCGATGGGAACGACGAATAAGACGTCGAGCG
ATTTGGCGATGGAGAGGCGGATGAGGAGGATGCTCATGACGCGAAGGGAT
TATTGTTGATACAGCTTGTACAAAATAAATAGTTTTGAGTCCTGAGACG
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protein sequence of NO27G00940.1

>NO27G00940.1-protein ID=NO27G00940.1-protein|Name=NO27G00940.1|organism=Nannochloropsis oceanica|type=polypeptide|length=460bp
MEWGGGGGGGNGSVETNQQQQQRPHHFKTEEEYNGFLRVAQESIAMGRET
LTAVAGQQESLDRAEAVVDSNRYLIDKSARSLRGMSWWGSVKNFFSEEPA
APRPKASSWMTKQQQQQPQQQEEATGRSSIPTSSSISSRNSMAAQWQDQP
QGYTQSSSDERQELYSLRHEGNATDARATRSQAGSAPPATLARVAHIQDT
YLEKLSKSVDEQRAIGGTLHEALSEQAAQINRLGESSEGLHDRTRAVVRK
AARVSRSQGGWVGERPKLHKFIAFRELRTGLFLSVVGEELKLQEPHMTKA
CQFAAYTCQTALTGLQSVLSRKWLGQHWITGALGVRGTGLGKNEEWEVDW
GKPGGAFLLSCSANWGNGGYLMLVPGKEGGRGGGEGRGQDVRLGGYGMEE
RGKAALFELMDCETYRTTEVVTEIMHKKTPAELAAEEELRNRQGVLGGWR
TAALKGSRG*
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Synonyms
Publications