NO27G00880, NO27G00880 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO27G00880 vs. NCBI_GenBank
Match: EWM21005.1 (hypothetical protein Naga_100081g12 [Nannochloropsis gaditana]) HSP 1 Score: 216.1 bits (549), Expect = 7.400e-53 Identity = 112/133 (84.21%), Postives = 118/133 (88.72%), Query Frame = 0 Query: 15 MAMSSAHAATLKNVAGKSAVQLYRDCLRVADHIASKSPKGIALRNMLRSEFKKHANVEDGKQVEQLKMNAARGLANYLLYESGSKEPKIRARMNKTTADMIKQCMDNAKRERXXXXXXXXXXGAELEHVHVKI 148 MA+ SAHAATLKNVAGKS+VQLYRDCLRVADHIASKSPKGIALR MLRSEFKK+A V+D KQVEQLKMNAARGLANYLLYESGSKEPKIRARMNKTT+DMIKQCM+NAKRER GAELEH HVKI Sbjct: 1 MALPSAHAATLKNVAGKSSVQLYRDCLRVADHIASKSPKGIALRKMLRSEFKKNAAVDDAKQVEQLKMNAARGLANYLLYESGSKEPKIRARMNKTTSDMIKQCMNNAKRERERKEKAERGEGAELEHFHVKI 133
BLAST of NO27G00880 vs. NCBI_GenBank
Match: CBN74171.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 92.4 bits (228), Expect = 1.200e-15 Identity = 44/77 (57.14%), Postives = 60/77 (77.92%), Query Frame = 0 Query: 31 KSAVQLYRDCLRVADHIASKSPKGIALRNMLRSEFKKHANVEDGKQVEQLKMNAARGLANYLLYESGSKEPKIRARM 108 +S+ +LYRDCLR+ DHIASKSPKG LR +LR+EFKK+ D ++E LK A RGL+NYL++ESGS +P+++ RM Sbjct: 9 RSSTRLYRDCLRLVDHIASKSPKGQQLRLILRTEFKKNMGETDPVKIEALKGGAIRGLSNYLVHESGSNDPQLKKRM 85
BLAST of NO27G00880 vs. NCBI_GenBank
Match: XP_008868665.1 (hypothetical protein H310_05672 [Aphanomyces invadans] >ETW02060.1 hypothetical protein H310_05672 [Aphanomyces invadans]) HSP 1 Score: 88.2 bits (217), Expect = 2.300e-14 Identity = 42/93 (45.16%), Postives = 63/93 (67.74%), Query Frame = 0 Query: 31 KSAVQLYRDCLRVADHIASKSPKGIALRNMLRSEFKKHANVEDGKQVEQLKMNAARGLANYLLYESGSKEPKIRARMNKTTADMIKQCMDNAK 124 ++++QLYRDCLR+A+HI K+ KG A+R+MLR+EF+K N D ++E LK NA RGL+NYL+ + SK+ K++ + T K NA+ Sbjct: 9 RTSLQLYRDCLRLANHIGGKTKKGYAIRSMLRAEFRKSMNETDELKIENLKANAVRGLSNYLVLANSSKDGKLKQAIRTTDESSAKDSAANAE 101
BLAST of NO27G00880 vs. NCBI_GenBank
Match: XP_009833708.1 (hypothetical protein H257_09247 [Aphanomyces astaci] >ETV76796.1 hypothetical protein H257_09247 [Aphanomyces astaci]) HSP 1 Score: 82.8 bits (203), Expect = 9.800e-13 Identity = 39/86 (45.35%), Postives = 60/86 (69.77%), Query Frame = 0 Query: 31 KSAVQLYRDCLRVADHIASKSPKGIALRNMLRSEFKKHANVEDGKQVEQLKMNAARGLANYLLYESGSKEPKIRARMNKTTADMIK 117 ++++QLYRDCLR+A+HI K+ KG A+R+MLR+EF+K + D ++E LK NA RGL+NYL+ + SK+ K++ + T K Sbjct: 9 RTSLQLYRDCLRLANHIGGKTKKGEAIRSMLRAEFRKSIHETDEVKIENLKANAVRGLSNYLVLANSSKDGKLKQAIRTTDESSAK 94
BLAST of NO27G00880 vs. NCBI_GenBank
Match: XP_012204494.1 (hypothetical protein SPRG_09680 [Saprolegnia parasitica CBS 223.65] >KDO24847.1 hypothetical protein SPRG_09680 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 82.0 bits (201), Expect = 1.700e-12 Identity = 39/80 (48.75%), Postives = 57/80 (71.25%), Query Frame = 0 Query: 31 KSAVQLYRDCLRVADHIASKSPKGIALRNMLRSEFKKHANVEDGKQVEQLKMNAARGLANYLLYESGSKEPKIRARMNKT 111 +S++QLYRDCLR+A HI S KG A+R+MLR+EF+K + D ++E LK NA RGL+NYL+ + SK+ K++ + T Sbjct: 8 RSSLQLYRDCLRLAKHIGGNSRKGEAIRSMLRAEFRKSMHETDELKIENLKANAVRGLSNYLVLANSSKDGKLKQAIKST 87
BLAST of NO27G00880 vs. NCBI_GenBank
Match: OWY97100.1 (putative mitochondrial protein [Phytophthora megakarya]) HSP 1 Score: 82.0 bits (201), Expect = 1.700e-12 Identity = 37/86 (43.02%), Postives = 60/86 (69.77%), Query Frame = 0 Query: 27 NVAGKSAVQLYRDCLRVADHIASKSPKGIALRNMLRSEFKKHANVEDGKQVEQLKMNAARGLANYLLYESGSKEPKIRARMNKTTA 113 N ++ +QLYRDCLR+A HI S KG+A+++++R EF+K + D +++E LK NA RGL+NYL+ + SK+ ++ M+K +A Sbjct: 4 NQVTRTTIQLYRDCLRLAKHIGGNSKKGLAIKDLVRREFEKGRSETDPEKIEALKANAVRGLSNYLMLANSSKDQRLHDAMHKKSA 89
BLAST of NO27G00880 vs. NCBI_GenBank
Match: XP_008611144.1 (hypothetical protein SDRG_07104 [Saprolegnia diclina VS20] >EQC35394.1 hypothetical protein SDRG_07104 [Saprolegnia diclina VS20]) HSP 1 Score: 81.6 bits (200), Expect = 2.200e-12 Identity = 39/80 (48.75%), Postives = 56/80 (70.00%), Query Frame = 0 Query: 31 KSAVQLYRDCLRVADHIASKSPKGIALRNMLRSEFKKHANVEDGKQVEQLKMNAARGLANYLLYESGSKEPKIRARMNKT 111 +S++QLYRDCLR+A HI S KG A+R MLR+EF+K + D ++E LK NA RGL+NYL+ + SK+ K++ + T Sbjct: 8 RSSLQLYRDCLRLAKHIGGNSRKGEAIRTMLRAEFRKSMHETDELKIENLKANAVRGLSNYLVLANSSKDGKLKQAIKST 87
BLAST of NO27G00880 vs. NCBI_GenBank
Match: XP_002997572.1 (conserved hypothetical protein [Phytophthora infestans T30-4] >EEY68587.1 conserved hypothetical protein [Phytophthora infestans T30-4]) HSP 1 Score: 80.9 bits (198), Expect = 3.700e-12 Identity = 38/83 (45.78%), Postives = 56/83 (67.47%), Query Frame = 0 Query: 27 NVAGKSAVQLYRDCLRVADHIASKSPKGIALRNMLRSEFKKHANVEDGKQVEQLKMNAARGLANYLLYESGSKEPKIRARMNK 110 N ++ +QLYRDCLR+A HI S KG A+R ++R EF K + D +++E LK NA RGL+NYL+ + SK+ +++ MNK Sbjct: 5 NQVTRTTIQLYRDCLRLAKHIGGNSKKGQAIRELVRREFDKGRSETDPEKIEALKANAVRGLSNYLMLANSSKDQRLQEAMNK 87
BLAST of NO27G00880 vs. NCBI_GenBank
Match: XP_024575076.1 (Complex 1 LYR protein [Plasmopara halstedii] >CEG38707.1 Complex 1 LYR protein [Plasmopara halstedii]) HSP 1 Score: 79.7 bits (195), Expect = 8.300e-12 Identity = 38/82 (46.34%), Postives = 57/82 (69.51%), Query Frame = 0 Query: 31 KSAVQLYRDCLRVADHIASKSPKGIALRNMLRSEFKKHANVEDGKQVEQLKMNAARGLANYLLYESGSKEPKIRARMNKTTA 113 +S QLYRDCLR+A HI S KG A+++++R EF K + D +++E LK NA RGL+NYL+ + SK+ ++R MNK ++ Sbjct: 8 RSTKQLYRDCLRLAKHIGGNSKKGQAIKDLIRREFDKGRSEVDIEKIETLKANAVRGLSNYLMLANSSKDQRLRDAMNKKSS 89
BLAST of NO27G00880 vs. NCBI_GenBank
Match: POM79750.1 (mitochondrial protein [Phytophthora palmivora var. palmivora]) HSP 1 Score: 79.3 bits (194), Expect = 1.100e-11 Identity = 37/79 (46.84%), Postives = 54/79 (68.35%), Query Frame = 0 Query: 35 QLYRDCLRVADHIASKSPKGIALRNMLRSEFKKHANVEDGKQVEQLKMNAARGLANYLLYESGSKEPKIRARMNKTTAD 114 QLYRDCLR+A HI S KG A++ ++R EF+K + D +++E LK NA RGL+NYL+ + SK+ ++ MNK + D Sbjct: 37 QLYRDCLRLAKHIGGNSKKGQAIKELVRREFEKGRSETDPEKIEALKANAVRGLSNYLMLANSSKDQRLHDAMNKKSKD 115 The following BLAST results are available for this feature:
BLAST of NO27G00880 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO27G00880 ID=NO27G00880|Name=NO27G00880|organism=Nannochloropsis oceanica|type=gene|length=838bpback to top protein sequence of NO27G00880.1 >NO27G00880.1-protein ID=NO27G00880.1-protein|Name=NO27G00880.1|organism=Nannochloropsis oceanica|type=polypeptide|length=148bpback to top Synonyms
Publications
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